View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20985_low_40 (Length: 294)

Name: NF20985_low_40
Description: NF20985
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20985_low_40
NF20985_low_40
[»] chr4 (43 HSPs)
chr4 (116-294)||(41881161-41881340)
chr4 (116-294)||(25331080-25331258)
chr4 (116-256)||(12112932-12113072)
chr4 (116-294)||(32950915-32951093)
chr4 (116-294)||(28541647-28541825)
chr4 (116-294)||(37046530-37046709)
chr4 (116-292)||(55302794-55302970)
chr4 (116-213)||(1112923-1113020)
chr4 (117-294)||(46635722-46635899)
chr4 (116-210)||(7007407-7007501)
chr4 (123-294)||(22201964-22202135)
chr4 (116-213)||(3436623-3436720)
chr4 (116-213)||(25446080-25446177)
chr4 (116-294)||(25504718-25504896)
chr4 (116-294)||(31314811-31314985)
chr4 (116-294)||(39479434-39479614)
chr4 (116-213)||(1044837-1044934)
chr4 (116-290)||(30009756-30009930)
chr4 (116-294)||(34228662-34228839)
chr4 (116-213)||(42786714-42786811)
chr4 (116-202)||(27454157-27454244)
chr4 (116-294)||(19740987-19741165)
chr4 (155-294)||(24131091-24131229)
chr4 (116-200)||(41320853-41320937)
chr4 (119-205)||(23464993-23465079)
chr4 (116-205)||(23987252-23987341)
chr4 (123-199)||(5800021-5800098)
chr4 (123-205)||(28370962-28371044)
chr4 (123-205)||(28483937-28484019)
chr4 (116-179)||(7249844-7249908)
chr4 (116-255)||(53275827-53275966)
chr4 (123-205)||(30967385-30967467)
chr4 (123-205)||(37915865-37915947)
chr4 (174-213)||(40537282-40537321)
chr4 (123-205)||(49834899-49834981)
chr4 (123-205)||(51320959-51321041)
chr4 (123-205)||(54853554-54853636)
chr4 (123-205)||(5441442-5441524)
chr4 (123-205)||(27768094-27768176)
chr4 (123-205)||(29649753-29649835)
chr4 (123-205)||(54341182-54341264)
chr4 (123-205)||(32684074-32684155)
chr4 (123-186)||(36479317-36479380)
[»] chr8 (24 HSPs)
chr8 (116-294)||(42938195-42938373)
chr8 (116-294)||(32711360-32711538)
chr8 (116-294)||(41479047-41479225)
chr8 (116-294)||(5576698-5576877)
chr8 (116-294)||(2704897-2705075)
chr8 (116-294)||(23115247-23115424)
chr8 (116-213)||(24501891-24501988)
chr8 (116-213)||(26374508-26374605)
chr8 (116-294)||(42735355-42735533)
chr8 (116-256)||(42937341-42937479)
chr8 (116-213)||(7506977-7507074)
chr8 (116-294)||(43959608-43959785)
chr8 (116-213)||(10392315-10392412)
chr8 (123-205)||(9288542-9288624)
chr8 (123-205)||(10295466-10295548)
chr8 (123-205)||(31623734-31623816)
chr8 (123-205)||(16362235-16362317)
chr8 (123-205)||(18958812-18958894)
chr8 (123-205)||(26856106-26856188)
chr8 (123-205)||(32497564-32497646)
chr8 (123-213)||(39189899-39189988)
chr8 (123-205)||(39467553-39467635)
chr8 (123-213)||(43166775-43166865)
chr8 (116-164)||(4950094-4950143)
[»] chr7 (37 HSPs)
chr7 (116-294)||(30440747-30440925)
chr7 (116-294)||(44343474-44343652)
chr7 (116-294)||(973135-973313)
chr7 (116-294)||(12893359-12893537)
chr7 (116-294)||(43581168-43581346)
chr7 (116-291)||(727466-727642)
chr7 (116-294)||(18914813-18914991)
chr7 (116-294)||(40996727-40996905)
chr7 (116-292)||(34008965-34009142)
chr7 (116-213)||(7718440-7718537)
chr7 (116-294)||(47879119-47879297)
chr7 (116-213)||(39219455-39219551)
chr7 (116-205)||(20275341-20275430)
chr7 (116-294)||(31638826-31639004)
chr7 (116-294)||(34695224-34695402)
chr7 (116-294)||(47914217-47914395)
chr7 (116-294)||(7719338-7719517)
chr7 (123-205)||(7993175-7993257)
chr7 (116-191)||(43679468-43679543)
chr7 (116-292)||(7113409-7113581)
chr7 (123-213)||(10676505-10676595)
chr7 (123-205)||(19251572-19251654)
chr7 (123-205)||(28034890-28034972)
chr7 (116-205)||(32142995-32143086)
chr7 (123-205)||(33382670-33382752)
chr7 (123-205)||(37327960-37328042)
chr7 (123-205)||(46405516-46405598)
chr7 (123-205)||(47066736-47066819)
chr7 (123-205)||(3022959-3023041)
chr7 (123-205)||(8675366-8675448)
chr7 (123-205)||(9882321-9882403)
chr7 (123-165)||(12740445-12740488)
chr7 (123-205)||(23101331-23101413)
chr7 (123-205)||(25805725-25805807)
chr7 (123-205)||(40460792-40460874)
chr7 (123-205)||(44256851-44256933)
chr7 (143-205)||(29585548-29585608)
[»] chr6 (11 HSPs)
chr6 (116-294)||(6197556-6197734)
chr6 (116-294)||(1391573-1391751)
chr6 (116-294)||(2300816-2300994)
chr6 (116-294)||(29076547-29076726)
chr6 (116-290)||(28002618-28002792)
chr6 (116-294)||(29111520-29111700)
chr6 (143-213)||(656995-657064)
chr6 (123-205)||(30385142-30385224)
chr6 (123-205)||(34759135-34759217)
chr6 (123-213)||(7497106-7497196)
chr6 (123-205)||(31895734-31895816)
[»] chr5 (17 HSPs)
chr5 (116-294)||(21147017-21147195)
chr5 (116-294)||(33656119-33656299)
chr5 (116-213)||(849178-849275)
chr5 (116-294)||(32157975-32158155)
chr5 (116-205)||(7016817-7016906)
chr5 (116-290)||(27459028-27459201)
chr5 (116-290)||(139227-139401)
chr5 (116-205)||(5272997-5273086)
chr5 (116-205)||(6460831-6460920)
chr5 (127-213)||(9220796-9220882)
chr5 (123-205)||(4240537-4240619)
chr5 (123-205)||(4550342-4550424)
chr5 (116-205)||(14465305-14465394)
chr5 (123-205)||(1152188-1152270)
chr5 (174-213)||(16894038-16894077)
chr5 (123-205)||(22746336-22746418)
chr5 (116-205)||(9689697-9689785)
[»] chr2 (28 HSPs)
chr2 (116-294)||(16269642-16269820)
chr2 (116-294)||(1789393-1789571)
chr2 (116-294)||(20605187-20605365)
chr2 (116-294)||(24776306-24776484)
chr2 (116-294)||(31170705-31170883)
chr2 (116-294)||(35317013-35317191)
chr2 (116-294)||(5093128-5093306)
chr2 (116-294)||(12407331-12407509)
chr2 (115-294)||(305545-305725)
chr2 (116-213)||(14198658-14198755)
chr2 (119-256)||(43847635-43847772)
chr2 (116-294)||(44765726-44765904)
chr2 (123-205)||(10125378-10125460)
chr2 (116-294)||(32125201-32125382)
chr2 (116-213)||(9120158-9120255)
chr2 (143-294)||(22551872-22552022)
chr2 (123-213)||(378969-379059)
chr2 (116-205)||(26601281-26601370)
chr2 (116-205)||(28844595-28844684)
chr2 (123-205)||(28740371-28740453)
chr2 (123-205)||(33135663-33135745)
chr2 (134-205)||(215324-215395)
chr2 (123-205)||(3574887-3574969)
chr2 (123-205)||(6224635-6224718)
chr2 (123-205)||(7026644-7026726)
chr2 (123-205)||(10657446-10657528)
chr2 (123-205)||(13833510-13833592)
chr2 (127-205)||(18177307-18177385)
[»] chr3 (44 HSPs)
chr3 (116-256)||(33807877-33808018)
chr3 (116-294)||(19253776-19253954)
chr3 (116-294)||(20498158-20498336)
chr3 (116-294)||(37820556-37820734)
chr3 (116-294)||(10139225-10139403)
chr3 (116-294)||(996165-996342)
chr3 (116-213)||(3206284-3206381)
chr3 (116-294)||(35337684-35337862)
chr3 (116-256)||(3999724-3999864)
chr3 (116-211)||(1440031-1440126)
chr3 (116-213)||(6589594-6589691)
chr3 (116-213)||(29448937-29449034)
chr3 (116-294)||(51699559-51699736)
chr3 (116-256)||(29029993-29030132)
chr3 (116-213)||(33996620-33996717)
chr3 (116-294)||(44762116-44762294)
chr3 (116-213)||(52114558-52114656)
chr3 (116-205)||(54625630-54625719)
chr3 (116-294)||(25418315-25418493)
chr3 (116-213)||(53929207-53929304)
chr3 (116-211)||(40246876-40246971)
chr3 (123-205)||(40897182-40897264)
chr3 (116-205)||(27899382-27899471)
chr3 (116-212)||(22057793-22057889)
chr3 (123-210)||(5825095-5825182)
chr3 (123-205)||(17946326-17946408)
chr3 (123-205)||(18749650-18749732)
chr3 (123-294)||(23753472-23753643)
chr3 (123-205)||(34484116-34484198)
chr3 (123-205)||(44906599-44906681)
chr3 (123-205)||(51737812-51737894)
chr3 (123-205)||(52618051-52618133)
chr3 (116-188)||(52079982-52080054)
chr3 (123-205)||(44276427-44276505)
chr3 (123-205)||(55235223-55235304)
chr3 (123-165)||(539490-539533)
chr3 (123-205)||(10660573-10660655)
chr3 (143-205)||(15492968-15493028)
chr3 (123-205)||(20833030-20833112)
chr3 (123-205)||(26107299-26107381)
chr3 (123-205)||(48379195-48379277)
chr3 (123-165)||(54628921-54628964)
chr3 (143-205)||(12103667-12103728)
chr3 (143-204)||(23535918-23535977)
[»] scaffold0400 (1 HSPs)
scaffold0400 (116-294)||(15112-15290)
[»] scaffold0365 (1 HSPs)
scaffold0365 (116-294)||(15755-15933)
[»] chr1 (34 HSPs)
chr1 (116-294)||(730091-730270)
chr1 (116-294)||(47654430-47654610)
chr1 (116-294)||(19451887-19452065)
chr1 (116-294)||(35279615-35279793)
chr1 (116-213)||(50192629-50192727)
chr1 (116-210)||(45760088-45760182)
chr1 (116-210)||(49418111-49418205)
chr1 (116-294)||(21222091-21222268)
chr1 (116-294)||(29556047-29556225)
chr1 (116-294)||(28824452-28824629)
chr1 (116-294)||(49198348-49198524)
chr1 (116-213)||(6304331-6304429)
chr1 (116-210)||(47780738-47780832)
chr1 (116-294)||(35679207-35679385)
chr1 (116-294)||(45535887-45536065)
chr1 (143-290)||(48524266-48524412)
chr1 (149-294)||(22183313-22183457)
chr1 (116-213)||(33025536-33025634)
chr1 (123-205)||(5495182-5495264)
chr1 (123-205)||(49230918-49231000)
chr1 (123-205)||(29219318-29219400)
chr1 (116-213)||(32589032-32589129)
chr1 (123-205)||(6312606-6312688)
chr1 (123-205)||(9577518-9577600)
chr1 (123-165)||(15835139-15835182)
chr1 (123-205)||(18798523-18798605)
chr1 (123-165)||(25612228-25612271)
chr1 (123-205)||(29396474-29396556)
chr1 (116-205)||(31622538-31622626)
chr1 (123-205)||(48177548-48177630)
chr1 (123-205)||(51701612-51701694)
chr1 (116-165)||(31572276-31572326)
chr1 (143-213)||(37014747-37014816)
chr1 (116-163)||(955823-955871)
[»] scaffold0037 (1 HSPs)
scaffold0037 (116-256)||(100199-100339)
[»] scaffold0004 (1 HSPs)
scaffold0004 (116-213)||(102126-102223)
[»] scaffold0276 (1 HSPs)
scaffold0276 (116-294)||(618-796)
[»] scaffold0151 (1 HSPs)
scaffold0151 (116-213)||(38684-38780)
[»] scaffold0113 (1 HSPs)
scaffold0113 (116-213)||(38974-39071)
[»] scaffold1504 (1 HSPs)
scaffold1504 (123-205)||(902-985)
[»] scaffold0306 (1 HSPs)
scaffold0306 (123-205)||(13921-14003)
[»] scaffold0152 (1 HSPs)
scaffold0152 (123-205)||(21324-21406)
[»] scaffold0543 (1 HSPs)
scaffold0543 (123-165)||(10638-10681)
[»] scaffold0110 (1 HSPs)
scaffold0110 (123-165)||(39703-39746)


Alignment Details
Target: chr4 (Bit Score: 79; Significance: 6e-37; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 116 - 294
Target Start/End: Original strand, 41881161 - 41881340
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||| |||||||     
T  41881161 aaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactaaacttttttttaagtgattaagagtcttgattgaataccacaagac 41881260  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||| |||||| ||| |||||||||||||       |||| | ||||||||||||||||||||||||    
T  41881261 tttttttaaatgacaaagaatcttgattgaataacacaagacttttttaaaattggaaagagtcttgattgaataccaca 41881340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 116 - 294
Target Start/End: Complemental strand, 25331258 - 25331080
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||| || || ||| |||||||||||||||||||| ||||||||||| |||||||     
T  25331258 aaatctgatttattaaacaatcctttgaaatttgaatgattttgaatatcactagact-ttttttaagtgattaagagtcttgattgaataccacaagac 25331160  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||| |||||| ||| |||||||||||||       |||| | ||||||||||||||||||||||||    
T  25331159 tttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaataccaca 25331080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 116 - 256
Target Start/End: Complemental strand, 12113072 - 12112932
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| ||||||| ||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||||     
T  12113072 aaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccattagact-ttttttaagtgattaagagttttgattgaataccacaagac 12112974  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagac 256  Q
           ||||| |||| |||||| ||| |||||||||||||    
T  12112973 tttttttaaatgacaaagaatcttgattgaataacacaagac 12112932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 116 - 294
Target Start/End: Original strand, 32950915 - 32951093
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||||||||||| || ||| |||||||||||||||||||| ||||||||||| |||| ||     
T  32950915 aaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagact-ttttttaagtgattaagagtcttgattgaataccacatgac 32951013  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||| |||||| ||| |||||||||||||       |||| | ||||||||||||||||||||||||    
T  32951014 tttttttaaatgacaaataatcttgattgaataacacaagactttttttaaattgaaaagagtcttgattgaataccaca 32951093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 116 - 294
Target Start/End: Complemental strand, 28541825 - 28541647
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| |||| || ||| ||||||||||||||||||||| || ||| |||||||||||||||||||| ||||||||||| ||| |||     
T  28541825 aaatctgatttattaaacaatcattcgaaatttgaatgattttgaataccactagact-ttttttaagtgattaagagtcttgattgaataccacgagac 28541727  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||| |||||| ||| |||||||||||||       |||| | ||||||||||||||||||||||||    
T  28541726 tttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattgaaaagagtcttgattgaataccaca 28541647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 116 - 294
Target Start/End: Original strand, 37046530 - 37046709
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||| |||| || || ||| |||||||||||||||||||| ||||||||||| ||||| |     
T  37046530 aaatctgatttattaaacaatccttcgaaatttgaatgattttaaatatcactagacttttttttaagtgattaagagtcttgattgaataccacaaaac 37046629  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||| |||||| ||| |||||||||||||       |||| | ||||||||||||||||||||||||    
T  37046630 tttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattgaaaagagtcttgattgaataccaca 37046709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 116 - 292
Target Start/End: Complemental strand, 55302970 - 55302794
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||||||||||| || ||| |||||||||||||||||||| ||||||||||| |||| ||     
T  55302970 aaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagact-ttttttaagtgattaagagtcttgattgaataccacatgac 55302872  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaatacca 292  Q
           ||||| |||| |||||| ||| || ||||||||||       |||| | ||||||||||||||||||||||    
T  55302871 ttttttaaaatgacaaagaatcttgattgaaaaacacaagactttttttaaattgaaaagagtcttgattgaatacca 55302794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 116 - 213
Target Start/End: Complemental strand, 1113020 - 1112923
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaaga 213  Q
    ||||||||||||||||| |||| |||||| ||||||||||||||||||||| || ||| |||||||||||||||||||| ||||||||||| |||||||    
T  1113020 aaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagact-ttttttaagtgattaagagtcttgattgaataccacaaga 1112923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 117 - 294
Target Start/End: Original strand, 46635722 - 46635899
Alignment:
Q  117 aatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagann 215  Q
    ||||| |||||||||| ||||||| ||| ||||||||||||||||||| | |||||| |||||||||||||||||||| ||||||||||| |||||||      
T  46635722 aatcttatttattaaacaatccttcgaaatttgaatgattttgaatactactaaact-ttttttaagtgattaagagtcttgattgaataccacaagact 46635820  T
Q  216 nnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
          ||||| |||| |||||| ||| ||||| ||||||        |||| | ||||||||||||||||||||||||    
T  46635821 ttttttaaatgacaaagaatcttgattgaataatacaagattttttttaaattggaaagagtcttgattgaataccaca 46635899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 116 - 210
Target Start/End: Complemental strand, 7007501 - 7007407
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacaca 210  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||||||||||| || ||| |||||||||||||||||||| ||||||||||| ||||    
T  7007501 aaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagact-ttttttaagtgattaagagtcttgattgaataccaca 7007407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 123 - 294
Target Start/End: Complemental strand, 22202135 - 22201964
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagannnnnnnn 221  Q
    |||||||||| |||| |||||| ||| ||||||||||||||||| || ||| |||||||||||||||||||| ||||||||||| |||||||            
T  22202135 atttattaaacaatcttttgaaattttaatgattttgaataccactagact-ttttttaagtgattaagagtcttgattgaataccacaagacttttttt 22202037  T
Q  222 aaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
    ||||| |||| |||||| ||| |||||||||||||       |||| | ||||||||||||||||||| ||||    
T  22202036 aaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaatatcaca 22201964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 116 - 213
Target Start/End: Complemental strand, 3436720 - 3436623
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaaga 213  Q
    ||||||||||||||||| ||||||| ||| |||||||||||||||||||||||| | | |||||||| ||||||||||| ||||||||||| |||||||    
T  3436720 aaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccattagatt-ttttttaaatgattaagagtcttgattgaatatcacaaga 3436623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 116 - 213
Target Start/End: Complemental strand, 25446177 - 25446080
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaaga 213  Q
    ||||||||||||||||| |||| || ||| ||||||||||||||||||||| || ||| |||||||||||||||||||| ||||||||||| |||||||    
T  25446177 aaatctgatttattaaacaatcattcgaaatttgaatgattttgaataccactagact-ttttttaagtgattaagagtcttgattgaataccacaaga 25446080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 116 - 294
Target Start/End: Original strand, 25504718 - 25504896
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| ||||||| ||| |||||||||||||||||| || |  ||| |||||||||||||||||||| ||||||||||| |||||||     
T  25504718 aaatctgatttattaaacaatccttcgaaatttgaatgattttgaatatcactggact-ttttttaagtgattaagagtcttgattgaatatcacaagaa 25504816  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           |||||   || |||||| ||| |||||||||||||       |||| | ||||||||||||||||||||||||    
T  25504817 tttttttaaatgatcaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaataccaca 25504896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 116 - 294
Target Start/End: Original strand, 31314811 - 31314985
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||||||||||| || ||| ||||||||||||||||||||     ||||||| |||||||     
T  31314811 aaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagact-ttttttaagtgattaagagt----cttgaataccacaagac 31314905  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||| |||||| |||||||||||||||||       |||| | ||| ||||||||||||||||||||    
T  31314906 tttttttaaatgacaaagaatcttgattaaataacacaagactttttttaaattgaaaaaagtcttgattgaataccaca 31314985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 116 - 294
Target Start/End: Original strand, 39479434 - 39479614
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaac-tcttttttaagtgattaagagttttgattgaataacacaaga 213  Q
    ||||||||||||||||| ||| ||| ||| |||||||||||||||||||||  |  | | |||||||||||||||||||| ||||||||||| |||||||    
T  39479434 aaatctgatttattaaacaattcttcgaaatttgaatgattttgaataccacaagtctttttttttaagtgattaagagtcttgattgaataccacaaga 39479533  T
Q  214 nnnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
            ||||| |||  |||||| ||| |||||||||||||       |||| | ||||||||||||||||||||||||    
T  39479534 ctttttttaaatgacaaggaatcttgattgaataacacaagactttttttaaattgaaaagagtcttgattgaataccaca 39479614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 116 - 213
Target Start/End: Complemental strand, 1044934 - 1044837
Alignment:
Q  116 aaatctgatttattaaataatcctttgaat-ttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaaga 213  Q
    ||||||||||||||||| ||||||| |||  ||||||| |||||||||||| || ||| |||||||||||||||||||| ||||||||||| |||||||    
T  1044934 aaatctgatttattaaacaatccttcgaaagttgaatggttttgaataccactagact-ttttttaagtgattaagagtcttgattgaataccacaaga 1044837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 116 - 290
Target Start/End: Original strand, 30009756 - 30009930
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| |||| ||| || ||| ||||||||||||||||| || ||| |||||||||||||||||||| ||||||||||| |||| ||     
T  30009756 aaatctgatttattaaacaatcatttaaaatttaaatgattttgaataccactagact-ttttttaagtgattaagagtcttgattgaataccacaggac 30009854  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaatac 290  Q
           |||||  ||| ||| || |||||||||||||||||       |||| | ||||||||||||||||||||    
T  30009855 tttttttaaatgataaagaattttgattaaataacacaagactttttttaaattggaaagagtcttgattgaatac 30009930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 116 - 294
Target Start/End: Original strand, 34228662 - 34228839
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| |||| || ||| ||| ||||||||||||||||| || ||| |||||||||||||||||| ||||||||||||| |||| ||     
T  34228662 aaatctgatttattaaacaatcattcgaaatttcaatgattttgaataccactagact-ttttttaagtgattaagaattttgattgaataccacatgac 34228760  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||| |||||| ||| |||||||| ||||       |||| | ||||||||||||||||||||||||    
T  34228761 tttttttaaatgacaaagaatcttgattgaataacac-agactttttttaaattgaaaagagtcttgattgaataccaca 34228839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 116 - 213
Target Start/End: Complemental strand, 42786811 - 42786714
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaaga 213  Q
    |||| |||||||||||| ||||||| ||| ||||||||||||||||||||| || ||| |||||||| ||||||||||| ||||||||||| |||||||    
T  42786811 aaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagact-ttttttaaatgattaagagtcttgattgaataccacaaga 42786714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 116 - 202
Target Start/End: Original strand, 27454157 - 27454244
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattga 202  Q
    |||||||||||||||||||||| ||  || ||||||||||||||||||||| |||||| |||| ||||||||||||| | ||||||||    
T  27454157 aaatctgatttattaaataatctttcaaaatttgaatgattttgaataccactaaacttttttgtaagtgattaagaatcttgattga 27454244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 116 - 294
Target Start/End: Original strand, 19740987 - 19741165
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    |||||| |||||||||| ||||||| ||| ||||||||||||| |||||||  | ||| |||||||||||||||| ||| |||| |||||| |||| ||     
T  19740987 aaatctaatttattaaacaatccttcgaaatttgaatgatttttaataccacaagact-ttttttaagtgattaaaagtcttgactgaataccacatgac 19741085  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||| |||||| ||| |||||||||||||       |||| | ||||||||||||||||||||||||    
T  19741086 tttttataaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaataccaca 19741165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 155 - 294
Target Start/End: Original strand, 24131091 - 24131229
Alignment:
Q  155 tttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagannnnnnnnaaatggcaaaaaatcttaattaaataacacaag 254  Q
    ||||||||||| || ||| |||||||||||||||||||| ||||||||||| |||||||        ||||| |||| |||||| ||| |||||||||||    
T  24131091 tttgaataccactagact-ttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaataacacaag 24131189  T
Q  255 acnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
    ||       |||| | ||||||||||||||||||||||||    
T  24131190 actttttttaaattggaaagagtcttgattgaataccaca 24131229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 116 - 200
Target Start/End: Complemental strand, 41320937 - 41320853
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgatt 200  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||||||||||| || ||| |||||||| ||||||||||| ||||||    
T  41320937 aaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagact-ttttttaaatgattaagagtcttgatt 41320853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 119 - 205
Target Start/End: Complemental strand, 23465079 - 23464993
Alignment:
Q  119 tctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||||||| ||||||| ||| |||||||| |||||||||||| || ||| | |||||||||||||||||| |||||||||||    
T  23465079 tctgatttattaaacaatccttcgaaatttgaatggttttgaataccactagact-tattttaagtgattaagagtcttgattgaata 23464993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 205
Target Start/End: Complemental strand, 23987341 - 23987252
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||| |||||||||| ||||||| ||| |||||||||||||||||||||  | ||| ||||||||||||| || |||||||||||||||    
T  23987341 aaatctaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagact-ttttttaagtgatgaaaagttttgattgaata 23987252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 123 - 199
Target Start/End: Complemental strand, 5800098 - 5800021
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgat 199  Q
    |||||||||| ||||||||||| |||||||||||||||||||||  | ||| ||||||||||||| || |||||||||    
T  5800098 atttattaaacaatcctttgaaatttgaatgattttgaataccacaagacttttttttaagtgatgaaaagttttgat 5800021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 28371044 - 28370962
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| |||||||| || |||||||||||||||||||||| | ||| || |||||||||| || |||||||||||||||    
T  28371044 atttattaaacaatcctttaaaatttgaatgattttgaataccatgagact-ttatttaagtgataaaaagttttgattgaata 28370962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 28484019 - 28483937
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||||||||||| ||| |||||||||||||||||||||  | ||| ||||||||||||| || ||| |||||||||||    
T  28484019 atttattaaataatccttcgaaatttgaatgattttgaataccacgagact-ttttttaagtgatgaaaagtcttgattgaata 28483937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 116 - 179
Target Start/End: Original strand, 7249844 - 7249908
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactctttttt 179  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||||||||||| || ||| ||||||    
T  7249844 aaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttt 7249908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 116 - 255
Target Start/End: Complemental strand, 53275966 - 53275827
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||| | ||||||| ||| ||||||||||||| |||| || || ||| |||||||||||||||| | | |||||||||||  ||||||     
T  53275966 aaatctgatttattacacaatccttcgaaatttgaatgattttaaatatcactagact-ttttttaagtgattaaaaatcttgattgaatactacaagac 53275868  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaaga 255  Q
           ||||| |||| |||||| ||| ||||||||||||    
T  53275867 tttttttaaatgacaaataatctttattgaataacacaaga 53275827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 30967385 - 30967467
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| ||||||||||| |||||||||||||||||||||  | ||| ||||||||||||| || | | |||||||||||    
T  30967385 atttattaaacaatcctttgaaatttgaatgattttgaataccacaagact-ttttttaagtgatgaaaaatcttgattgaata 30967467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 37915947 - 37915865
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||  | ||| ||||||||||||| || ||| |||||||||||    
T  37915947 atttattaaacaatccttcgaaatttgaatgattttgaataccacaagact-ttttttaagtgatgaaaagtcttgattgaata 37915865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 213
Target Start/End: Original strand, 40537282 - 40537321
Alignment:
Q  174 ttttttaagtgattaagagttttgattgaataacacaaga 213  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  40537282 ttttttaagtgattaagagttttgattgaataccacaaga 40537321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 49834899 - 49834981
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||  | ||| ||||||||||||| || ||| |||||||||||    
T  49834899 atttattaaacaatccttcgaaatttgaatgattttgaataccacaagact-ttttttaagtgatgaaaagtcttgattgaata 49834981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 51321041 - 51320959
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||  | ||| ||||||||||||| || ||| |||||||||||    
T  51321041 atttattaaacaatccttcgaaatttgaatgattttgaataccacaagact-ttttttaagtgatgaaaagtcttgattgaata 51320959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 54853554 - 54853636
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||  | ||| ||||||||||||| || ||| |||||||||||    
T  54853554 atttattaaacaatcctttgaaatttgaataattttgaataccacaagact-ttttttaagtgatgaaaagtcttgattgaata 54853636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 5441524 - 5441442
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||  | ||| |||||||| |||| || ||| |||||||||||    
T  5441524 atttattaaacaatccttcgaaatttgaatgattttgaataccacaagact-ttttttaaatgatgaaaagtcttgattgaata 5441442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 27768176 - 27768094
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||  | ||| |||||||| |||| || ||| |||||||||||    
T  27768176 atttattaaacaatccttcgaaatttgaatgattttgaataccacaagact-ttttttaaatgatgaaaagtcttgattgaata 27768094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 29649753 - 29649835
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| |||| || ||| |||||||||||||||||||||  | ||| ||||||||||||| || ||| |||||||||||    
T  29649753 atttattaaacaatctttcgaaatttgaatgattttgaataccacaagact-ttttttaagtgatgaaaagtcttgattgaata 29649835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 54341264 - 54341182
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||  | ||| |||||||| |||| || ||| |||||||||||    
T  54341264 atttattaaacaatccttcgaaatttgaatgattttgaataccacaagact-ttttttaaatgatgaaaagtcttgattgaata 54341182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 32684074 - 32684155
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||   ||  ||||||||| |||| || ||| |||||||||||    
T  32684074 atttattaaacaatccttcgaaatttgaatgattttgaatacca--caagacttttttaaatgatgaaaagtcttgattgaata 32684155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 36479317 - 36479380
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgat 186  Q
    |||||||||||||||||| ||| ||||||| |||||||||||||  | ||| |||||||||||||    
T  36479317 atttattaaataatccttcgaaatttgaataattttgaataccacgagact-ttttttaagtgat 36479380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 3e-32; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 116 - 294
Target Start/End: Original strand, 42938195 - 42938373
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||||||||||| || ||| |||||||||||||||||||| ||||||||||| |||||||     
T  42938195 aaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagact-ttttttaagtgattaagagtcttgattgaataccacaagac 42938293  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||| |||||| ||| |||||||||||||       |||| | ||||||||||||||||||||||||    
T  42938294 tttttttaaatgacaaataatcttgattgaataacacaagactttttttaaattgaaaagagtcttgattgaataccaca 42938373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 116 - 294
Target Start/End: Original strand, 32711360 - 32711538
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| ||||||| ||| ||| ||||||||||||||||| || ||| |||||||||||||||||||| ||||||||||| |||||||     
T  32711360 aaatctgatttattaaacaatccttcgaaatttaaatgattttgaataccactagact-ttttttaagtgattaagagtcttgattgaataccacaagac 32711458  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||| |||||| ||| |||||||||||||       |||| | ||||||||||||||||||||||||    
T  32711459 tttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattgaaaagagtcttgattgaataccaca 32711538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 116 - 294
Target Start/End: Complemental strand, 41479225 - 41479047
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| |||| || ||| |||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||| |||||||     
T  41479225 aaatctgatttattaaacaatcattcgaaatttgaatgattttgaataccattagact-ttttttaagtgattaagagtcttgattgaataccacaagac 41479127  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||| |||||| ||| |||||||||| ||       |||| | ||||||||||||||||||||||||    
T  41479126 tttttttaaatgacaaagaatcttgattgaataacacaaaactttttttaaattggaaagagtcttgattgaataccaca 41479047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 116 - 294
Target Start/End: Original strand, 5576698 - 5576877
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||| ||||||||| ||| ||| ||| ||||||||||||||||||||| |  ||| |||||||||||||||||||| ||||||||||| |||||||     
T  5576698 aaatctggtttattaaacaattcttcgaaatttgaatgattttgaataccacttgacttttttttaagtgattaagagtcttgattgaataccacaagac 5576797  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||| |||||| ||| |||||||||||||       |||| | ||||||||||||||||||||||||    
T  5576798 tttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaataccaca 5576877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 116 - 294
Target Start/End: Original strand, 2704897 - 2705075
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    |||| |||||||||||| |||| || ||| ||||||||||||||||||||| || ||| |||||||||||||||||||| ||||||||||| |||||||     
T  2704897 aaatttgatttattaaacaatcattcgaaatttgaatgattttgaataccactagact-ttttttaagtgattaagagtcttgattgaataccacaagac 2704995  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||| |||||| ||| |||||||||||||       || | | ||||||||||||||||||||||||    
T  2704996 tttttttaaatgacaaagaatcttgattgaataacacaagactttttttaatttggaaagagtcttgattgaataccaca 2705075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 116 - 294
Target Start/End: Original strand, 23115247 - 23115424
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| |||||||  || |||||||||||| |||||||| || ||| |||||||||||||||||||| ||||||||||| |||||||     
T  23115247 aaatctgatttattaaacaatccttccaaatttgaatgattt-gaataccactagact-ttttttaagtgattaagagtcttgattgaataccacaagac 23115344  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||| |||||| ||| |||||||||||||       |||| | ||||||||||||||||||||||||    
T  23115345 attttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaataccaca 23115424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 116 - 213
Target Start/End: Original strand, 24501891 - 24501988
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaaga 213  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||||||||||| || ||| |||||||||||||||||||| ||||||||||| |||||||    
T  24501891 aaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagact-ttttttaagtgattaagagtcttgattgaataccacaaga 24501988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 116 - 213
Target Start/End: Original strand, 26374508 - 26374605
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaaga 213  Q
    |||||| |||||||||| ||||||| ||| ||||||||||||||||||||| || ||| |||||||||||||||||||| ||||||||||| |||||||    
T  26374508 aaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagact-ttttttaagtgattaagagtcttgattgaataccacaaga 26374605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 116 - 294
Target Start/End: Original strand, 42735355 - 42735533
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| ||| ||| ||| ||||||||||||||||||||| || ||| |||||||||||||||||||| || |||||||| ||||||      
T  42735355 aaatctgatttattaaacaatacttcgaaatttgaatgattttgaataccactagact-ttttttaagtgattaagagtcttaattgaataccacaagtc 42735453  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           |||||  ||| |||||| ||| |||||||||||||       |||| | ||||||||||||||||||||||||    
T  42735454 tttttttaaatgataaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaataccaca 42735533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 116 - 256
Target Start/End: Complemental strand, 42937479 - 42937341
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||||||||||| || ||| |||||||||||||||||||  | ||||||||| |||||||     
T  42937479 aaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagact-ttttttaagtgattaagag--tcgattgaataccacaagac 42937383  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagac 256  Q
           ||||| ||||||||||| ||| |||||||||||||    
T  42937382 tttttttaaatgacaaaaaatcttgattgaataacacaagac 42937341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 116 - 213
Target Start/End: Original strand, 7506977 - 7507074
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaaga 213  Q
    ||||||||||||||||| |||||||  || |||||||| |||||||||||| || ||| |||||||||||||||||||| ||||||||||| |||||||    
T  7506977 aaatctgatttattaaacaatccttcaaaatttgaatggttttgaataccactagact-ttttttaagtgattaagagtcttgattgaataccacaaga 7507074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 116 - 294
Target Start/End: Complemental strand, 43959785 - 43959608
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| |||| || ||| ||||||||||||||||||||| ||  || ||||| |||||||||||| | |||||||||| ||||||||     
T  43959785 aaatctgatttattaaacaatcattcgaaatttgaatgattttgaataccactagtct-tttttgaagtgattaagaatcttgattgaat-acacaagac 43959688  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||| |||||| ||| |||||||||||||       |||| | ||||||||||||||||||||||||    
T  43959687 ttttttaaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaataccaca 43959608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 116 - 213
Target Start/End: Original strand, 10392315 - 10392412
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaaga 213  Q
    ||||||||||||||||| ||||||| ||| ||||||||||| ||||||||| || ||| ||| |||||||||||| ||| ||||||||||| |||||||    
T  10392315 aaatctgatttattaaacaatccttcgaaatttgaatgattctgaataccactagact-tttcttaagtgattaaaagtcttgattgaatatcacaaga 10392412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 9288542 - 9288624
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||  | ||| ||||||||||||| || | |||||||||||||    
T  9288542 atttattaaacaatccttcgaaatttgaatgattttgaataccacaagact-ttttttaagtgatgaaaatttttgattgaata 9288624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 10295466 - 10295548
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||  | ||| ||||||||||||| || ||| |||||||||||    
T  10295466 atttattaaacaatccttcgaaatttgaatgattttgaataccacaagact-ttttttaagtgatgaaaagtcttgattgaata 10295548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 31623816 - 31623734
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||  | ||| ||||||||||||| || ||| |||||||||||    
T  31623816 atttattaaacaatccttcgaaatttgaatgattttgaataccacaagact-ttttttaagtgatgaaaagtcttgattgaata 31623734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 16362317 - 16362235
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||  | ||| |||||||||| || || ||| |||||||||||    
T  16362317 atttattaaacaatccttcgaaatttgaatgattttgaataccacgagact-ttttttaagtaatgaaaagtcttgattgaata 16362235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 18958812 - 18958894
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||  | ||| |||||||| |||| || ||| |||||||||||    
T  18958812 atttattaaacaatccttcgaaatttgaatgattttgaataccacaagact-ttttttaaatgatgaaaagtcttgattgaata 18958894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 26856188 - 26856106
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| ||| ||| ||| |||||||||||||||||||||  | ||| ||||||||||||| || ||| |||||||||||    
T  26856188 atttattaaacaatacttcgaaatttgaatgattttgaataccacaagact-ttttttaagtgatgaaaagtcttgattgaata 26856106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 32497646 - 32497564
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| |||| || ||| |||||||||||||||||||||  | ||| ||||||||||||| || ||| |||||||||||    
T  32497646 atttattaaacaatcattcgaaatttgaatgattttgaataccacaagact-ttttttaagtgatgaaaagtcttgattgaata 32497564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 213
Target Start/End: Original strand, 39189899 - 39189988
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaaga 213  Q
    |||||||||| ||||||| ||| |||||||||| ||||||| ||| | ||| |||||||| |||| ||||||||| |||||||| |||||||    
T  39189899 atttattaaacaatccttcgaaatttgaatgatgttgaata-catgagact-ttttttaaatgataaagagtttttattgaataccacaaga 39189988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 39467553 - 39467635
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||  | ||| |||||||| |||| || ||| |||||||||||    
T  39467553 atttattaaacaatccttcgaaatttgaatgattttgaataccacaagact-ttttttaaatgatgaaaagtcttgattgaata 39467635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 213
Target Start/End: Original strand, 43166775 - 43166865
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaaga 213  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||  | ||| ||||| || |||  |||||| ||||||||||| |||||||    
T  43166775 atttattaaacaatccttcgaaatttgaatgattttgaataccacaagact-tttttaaaatgacaaagagtcttgattgaataccacaaga 43166865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 4950094 - 4950143
Alignment:
Q  116 aaatctgatttattaaataatcctttg-aatttgaatgattttgaatacc 164  Q
    |||||| ||||||||||||||| |||| || |||||||||||||||||||    
T  4950094 aaatctaatttattaaataatcttttgaaacttgaatgattttgaatacc 4950143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 3e-32; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 116 - 294
Target Start/End: Complemental strand, 30440925 - 30440747
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||||||||||| || ||| |||||||||||||||||||| ||||||||||| |||||||     
T  30440925 aaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagact-ttttttaagtgattaagagtcttgattgaataccacaagat 30440827  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||| |||||| ||| |||||||||||||       |||| | ||||||||||||||||||||||||    
T  30440826 tttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaataccaca 30440747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 116 - 294
Target Start/End: Original strand, 44343474 - 44343652
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||| ||||||| |||||| |||||||||||||||||||| ||||||||||| |||||||     
T  44343474 aaatctgatttattaaacaatccttcgaaatttgaatgattttaaataccactaaact-ttttttaagtgattaagagtcttgattgaatatcacaagac 44343572  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||| |||||| ||| |||||||||||||       |||| | ||||||||||||||||||||||||    
T  44343573 tttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaataccaca 44343652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 116 - 294
Target Start/End: Complemental strand, 973313 - 973135
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||||||||||| |||| | |||||||||||||||||||| ||||||||||| |||||||     
T  973313 aaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactaaatt-ttttttaagtgattaagagtcttgattgaataccacaagac 973215  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||| |||||| ||| |||||||||| ||       |||| | ||||||||||||||||||||||||    
T  973214 tttttttaaatgacaaagaatcttgattgaataacacaaaactttttttaaattggaaagagtcttgattgaataccaca 973135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 116 - 294
Target Start/End: Complemental strand, 12893537 - 12893359
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| ||| ||| ||| |||||||||||||||||||||||| ||| |||||||||||||||||||| |||||| |||| |||||||     
T  12893537 aaatctgatttattaaacaattcttcgaaatttgaatgattttgaataccattagact-ttttttaagtgattaagagtcttgattaaataccacaagac 12893439  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||| |||||| ||| |||||||||||||       |||| | ||||||||||||||||||||||||    
T  12893438 tttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaataccaca 12893359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 116 - 294
Target Start/End: Original strand, 43581168 - 43581346
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||||||||||| || ||| |||||||||||||||||||| |||||||||||  ||||||     
T  43581168 aaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagact-ttttttaagtgattaagagtcttgattgaatacaacaagac 43581266  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||| |||||| ||| |||||||||||||       |||| | ||||||||||||||||||||||||    
T  43581267 tttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaataccaca 43581346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 116 - 291
Target Start/End: Complemental strand, 727642 - 727466
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||| | || | | ||||||||||||| |||||||||||||||||| |||||||     
T  727642 aaatctgatttattaaacaatcctttgaaatttgaatgattttgaatactactagatttttttttaagtgataaagagttttgattgaatatcacaagac 727543  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaatacc 291  Q
           ||||| |||| ||| || ||| |||||||||||||       |||| | |||||||||||||||||||||    
T  727542 tttttttaaatgacaaagaattttgattgaataacacaagactttttttaaattgaaaagagtcttgattgaatacc 727466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 116 - 294
Target Start/End: Original strand, 18914813 - 18914991
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| || |||||||| ||||||||||||||||||||| || ||| |||||||||||||||||||| ||||||||||| |||||||     
T  18914813 aaatctgatttattaaacaaacctttgaaatttgaatgattttgaataccactagact-ttttttaagtgattaagagtcttgattgaataccacaagac 18914911  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||| | |||| ||| || ||| |||||||||||||       |||| | ||||||||||||||||||||||||    
T  18914912 tttttttaaaggacaaagaattttgattgaataacacaagacttttttaaaattggaaagagtcttgattgaataccaca 18914991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 116 - 294
Target Start/End: Original strand, 40996727 - 40996905
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||||||||||| || ||| ||||||||| |||||||||| ||||||||||| |||||||     
T  40996727 aaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagact-ttttttaagcgattaagagtcttgattgaataccacaagac 40996825  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||| |||||| ||| |||||||| ||||       |||| | ||||||||||||||||||||||||    
T  40996826 tttttttaaatgacaaagaatcttgattgaataacacgagactttttttaaattggaaagagtcttgattgaataccaca 40996905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 116 - 292
Target Start/End: Complemental strand, 34009142 - 34008965
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaa-actcttttttaagtgattaagagttttgattgaataacacaaga 213  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||||||||||| ||  ||| |||||||||||||||||||| ||||||||||| |||||||    
T  34009142 aaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactaggact-ttttttaagtgattaagagtgttgattgaataccacaaga 34009044  T
Q  214 nnnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaatacca 292  Q
            ||||| |||| |||||| ||| |||||||||||||       |||| | ||||||||||||||||||||||    
T  34009043 ctttttttaaatgacaaataatcttgattgaataacacaagactttttttaaattgaaaagagtcttgattgaatacca 34008965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 116 - 213
Target Start/End: Original strand, 7718440 - 7718537
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaaga 213  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||||||||||| || ||| |||||||||||||||||||| ||||||||||| |||||||    
T  7718440 aaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagact-ttttttaagtgattaagagtcttgattgaataccacaaga 7718537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 116 - 294
Target Start/End: Complemental strand, 47879297 - 47879119
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| |||||||| || |||||||||||||||||| || || ||| |||||||||||||||||||| ||||||||||| |||| ||     
T  47879297 aaatctgatttattaaacaatccttttaaatttgaatgattttgaatatcactagact-ttttttaagtgattaagagtcttgattgaataccacatgac 47879199  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||| |||||| ||| |||||||||||||       |||| | ||||||| ||||||||||||||||    
T  47879198 tttttttaaatgacaaagaatcttgattgaataacacaagacttttttaaaattgaaaagagtattgattgaataccaca 47879119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 116 - 213
Target Start/End: Original strand, 39219455 - 39219551
Alignment:
Q  116 aaatctgatttattaaataatcctttgaatttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaaga 213  Q
    ||||||||||||||||| |||| |   ||||||||||||||||||||||| || ||| |||||||||||||||||||| |||||||||||||||||||    
T  39219455 aaatctgatttattaaacaatcatcaaaatttgaatgattttgaataccaatagact-ttttttaagtgattaagagtcttgattgaataacacaaga 39219551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 116 - 205
Target Start/End: Original strand, 20275341 - 20275430
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    ||||||||||||||||| ||||||| ||| |||||||||||||||||||||| | ||| |||||||||||||||||||| |||||||||||    
T  20275341 aaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccataagact-ttttttaagtgattaagagtcttgattgaata 20275430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 116 - 294
Target Start/End: Complemental strand, 31639004 - 31638826
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||||||||||| || ||| |||||||||||||||||||| ||||| ||||| ||||  |     
T  31639004 aaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagact-ttttttaagtgattaagagtcttgatagaataccacacaag 31638906  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||| ||| || ||| |||||||||||||       |||| | ||||||||||||||||||||||||    
T  31638905 tttttttaaatgacaaagaattttgattgaataacacaagactttttttaaattgaaaagagtcttgattgaataccaca 31638826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 116 - 294
Target Start/End: Complemental strand, 34695402 - 34695224
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| ||||||| ||| |||||||| |||||||||||| |  ||| |||||||||||||||||||| ||||||||||| ||||| |     
T  34695402 aaatctgatttattaaacaatccttcgaaatttgaatggttttgaataccactggact-ttttttaagtgattaagagtcttgattgaataccacaaaac 34695304  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||  |||||| ||| |||||||||||||       |||| | ||||||||||||||||||||||||    
T  34695303 tttttttaaatgacaaggaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaataccaca 34695224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 116 - 294
Target Start/End: Complemental strand, 47914395 - 47914217
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    |||||| |||||||||| ||||||| ||| |||||||||||||||||| || || ||| |||||||||||||||||||| ||||||||||| |||| ||     
T  47914395 aaatcttatttattaaacaatccttcgaaatttgaatgattttgaatatcactagact-ttttttaagtgattaagagtcttgattgaataccacatgac 47914297  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||| |||||| ||| |||||||||||||       |||| | ||||||| ||||||||||||||||    
T  47914296 tttttttaaatgacaaagaatcttgattgaataacacaagacttttttaaaattgaaaagagtattgattgaataccaca 47914217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 116 - 294
Target Start/End: Original strand, 7719338 - 7719517
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| |||| || ||| ||||||||||||||||||||| || | | |||||||||||||||||||| ||||||||||| |||||||     
T  7719338 aaatctgatttattaaacaatcattcgaaatttgaatgattttgaataccactagatt-ttttttaagtgattaagagtcttgattgaataccacaagac 7719436  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtc-ttgattgaataccaca 294  Q
           ||||| |||| ||| || ||| |||||||||||||       |||| | |||||||| ||||||||||||||||    
T  7719437 tttttttaaatgacaaataatattgattgaataacacaagactttttttaaattggaaagagtctttgattgaataccaca 7719517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 7993257 - 7993175
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||| | ||| ||||||||||||| || |||||||||||||||    
T  7993257 atttattaaacaatccttcgaaatttgaatgattttgaataccataagact-ttttttaagtgatgaaaagttttgattgaata 7993175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 43679543 - 43679468
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaaga 191  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||||||||||| |  ||| ||||||||||||||||||    
T  43679543 aaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactggact-ttttttaagtgattaaga 43679468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 292
Target Start/End: Complemental strand, 7113581 - 7113409
Alignment:
Q  116 aaatctgatttattaaataatcctttg-aatttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| ||||||  | ||||||||| ||||||||||||| |  ||| |||||||||||||||| |||    |||||||| ||||| |     
T  7113581 aaatctgatttattaaacaatcctgcgaaatttgaattattttgaataccactggact-ttttttaagtgattaaaagt----attgaataccacaaaac 7113487  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaatacca 292  Q
           |||||  |||||||||||||| |||||||||||||       |||| | ||||||||||||||||||||||    
T  7113486 tttttttaaatgataaaaaatcttaattgaataacacaagactttttttaaattggaaagagtcttgattgaatacca 7113409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 123 - 213
Target Start/End: Original strand, 10676505 - 10676595
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaaga 213  Q
    |||||||||| ||||||| ||| ||||||||||||||||||| || | ||| ||||||||||||| || ||| ||||||||||| |||||||    
T  10676505 atttattaaacaatccttcgaaatttgaatgattttgaatacaatgagact-ttttttaagtgatgaaaagtcttgattgaataccacaaga 10676595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 19251654 - 19251572
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||  | ||| ||||||||||||| || | |||||||||||||    
T  19251654 atttattaaacaatccttcgaaatttgaatgattttgaataccacgagact-ttttttaagtgatgaaaaattttgattgaata 19251572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 28034890 - 28034972
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||  | ||| ||||||||||||| || ||| |||||||||||    
T  28034890 atttattaaacaatcctttgaaatttgaataattttgaataccacaagact-ttttttaagtgatgaaaagtcttgattgaata 28034972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 205
Target Start/End: Original strand, 32142995 - 32143086
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactctttttt-aagtgattaagagttttgattgaata 205  Q
    ||||||||||||||||| |||||||  || |||||||||||||||||||||    ||| |||||| |||||||||||||| |||||| ||||    
T  32142995 aaatctgatttattaaacaatccttcaaaatttgaatgattttgaataccacgtgacttttttttgaagtgattaagagtcttgattcaata 32143086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 33382752 - 33382670
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| ||||||| ||| ||| |||||||||||||||||| | ||| ||||||||||||| || ||| |||||||||||    
T  33382752 atttattaaacaatccttcgaaatttaaatgattttgaataccatgagact-ttttttaagtgatgaaaagtcttgattgaata 33382670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 37328042 - 37327960
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| ||||||||||| |||||||||||||||||||||  | ||| |||||||||| || || ||| |||||||||||    
T  37328042 atttattaaacaatcctttgaaatttgaatgattttgaataccacaagact-ttttttaagtaatgaaaagtcttgattgaata 37327960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 46405516 - 46405598
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| |||| |||||| |||||||||||||||||||||  | ||| ||||||||||||| || ||| |||||||||||    
T  46405516 atttattaaacaatcatttgaaatttgaatgattttgaataccacaagact-ttttttaagtgatgaaaagtcttgattgaata 46405598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 47066819 - 47066736
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||  | ||| ||||||||||||| ||   |||||||||||||    
T  47066819 atttattaaacaatccttcgaaatttgaatgattttgaataccacaagacttttttttaagtgatgaaattttttgattgaata 47066736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 3023041 - 3022959
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||  | ||| ||||||||||||| || | | |||||||||||    
T  3023041 atttattaaacaatccttcgaaatttgaatgattttgaataccacaagact-ttttttaagtgatgaaaaatcttgattgaata 3022959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 8675448 - 8675366
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| ||||||| ||| ||| |||||||||||||||||  | ||| ||||||||||||| || ||| |||||||||||    
T  8675448 atttattaaacaatccttcgaagtttaaatgattttgaataccacaagact-ttttttaagtgatgaaaagtcttgattgaata 8675366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 9882321 - 9882403
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| |||| || ||| |||||||||||||||||||||  | ||| ||||||||||||| || ||| |||||||||||    
T  9882321 atttattaaacaatcattcgaaatttgaatgattttgaataccacaagact-ttttttaagtgatgaaaagtcttgattgaata 9882403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 165
Target Start/End: Complemental strand, 12740488 - 12740445
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaatacca 165  Q
    |||||||||| ||||||||||| |||||||||||||||||||||    
T  12740488 atttattaaacaatcctttgaaatttgaatgattttgaatacca 12740445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 23101413 - 23101331
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||  | ||| |||||||| |||| || ||| |||||||||||    
T  23101413 atttattaaacaatccttcgaaatttgaatgattttgaataccacaagact-ttttttaaatgatgaaaagtcttgattgaata 23101331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 25805807 - 25805725
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| ||||||  ||| |||||||||||||||||||||  ||| | ||||||||||||| || | |||||||||||||    
T  25805807 atttattaaacaatcctacgaaatttgaatgattttgaatacca-caaatttttttttaagtgatgaaaaattttgattgaata 25805725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 40460792 - 40460874
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| |||| || ||| |||||||||||||||||||||  | ||| ||||||||||||| || ||| |||||||||||    
T  40460792 atttattaaacaatcattcgaaatttgaatgattttgaataccacaagact-ttttttaagtgatgaaaagtcttgattgaata 40460874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 44256851 - 44256933
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| |||| || ||| |||||||||||||||||||||  | ||| ||||||||||||| || ||| |||||||||||    
T  44256851 atttattaaacaatcattcgaaatttgaatgattttgaataccacgatact-ttttttaagtgatgaaaagtcttgattgaata 44256933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 205
Target Start/End: Complemental strand, 29585608 - 29585548
Alignment:
Q  143 aatttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||||||||||||||||  | ||| |||||||||||| ||| |||||||||||||||    
T  29585608 aatttgaatgattttgaataccagaagact-ttttttaagtga-taaaagttttgattgaata 29585548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 3e-32; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 116 - 294
Target Start/End: Original strand, 6197556 - 6197734
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||||||||||| || ||| |||||||||||||||||||| ||||||||||| |||||||     
T  6197556 aaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagact-ttttttaagtgattaagagtcttgattgaataccacaagac 6197654  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||| |||||| ||| |||||||||||||       |||| | ||||||||||||||||||||||||    
T  6197655 tttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaataccaca 6197734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 116 - 294
Target Start/End: Complemental strand, 1391751 - 1391573
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| |||||||  || ||||||||||||||||||||| || ||| |||||||||||||||||||| ||||||||||| |||||||     
T  1391751 aaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagact-ttttttaagtgattaagagtcttgattgaataccacaagac 1391653  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||  |||||| ||| |||||||||||||       |||| | ||||||||||||||||||||||||    
T  1391652 tttatttaaatgacaatgaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaataccaca 1391573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 116 - 294
Target Start/End: Original strand, 2300816 - 2300994
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    |||||| |||||||||| ||||||| ||| ||||||||||||| ||||||| || ||| ||||||||||||| |||||| ||||||||||| |||||||     
T  2300816 aaatcttatttattaaacaatccttcgaaatttgaatgattttcaataccagtagact-ttttttaagtgatcaagagtcttgattgaataccacaagac 2300914  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||| |||||| ||| |||||||||||||       |||| | ||||||||||||||||||||||||    
T  2300915 tttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattgaaaagagtcttgattgaataccaca 2300994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 116 - 294
Target Start/End: Complemental strand, 29076726 - 29076547
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||||||||| | || ||| |||||||||||||||||| | | ||||||||| |||||||     
T  29076726 aaatctgatttattaaacaatccttcgaaatttgaatgattttgaatactactagacttttttttaagtgattaagaatctagattgaataccacaagac 29076627  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||| |||||| ||| |||||||||||||       |||| | ||||||||||||||||||| ||||    
T  29076626 tttttttaaatgacaaagaatcttgattgaataacacaagactttatttaaattggaaagagtcttgattgaatatcaca 29076547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 116 - 290
Target Start/End: Complemental strand, 28002792 - 28002618
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| |||||||  || |||||||||||||||||| || || ||| |||||||||||||||||||| ||||||||||| || ||||     
T  28002792 aaatctgatttattaaacaatccttccaaatttgaatgattttgaatatcactagact-ttttttaagtgattaagagtcttgattgaataccagaagac 28002694  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaatac 290  Q
           ||||| ||||||||||| ||| ||||| |||||||       |||| | ||||||||||||||||||||    
T  28002693 tttttttaaatgacaaaaaatcttgattgaataagacaagactttttttaaattggaaagagtcttgattgaatac 28002618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 116 - 294
Target Start/End: Complemental strand, 29111700 - 29111520
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactctttttt-aagtgattaagagttttgattgaataacacaaga 213  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||||||||| | || ||| |||||| |||||||||||| | | ||||||||| |||||||    
T  29111700 aaatctgatttattaaacaatccttcgaaatttgaatgattttgaatactactagactttttttttaagtgattaagaatctagattgaataccacaaga 29111601  T
Q  214 nnnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
            ||||| |||| |||||| ||| |||||||||||||       |||| | ||||||||||||||||||| ||||    
T  29111600 ctttttttaaatgacaaagaatcttgattgaataacacaagactttatttaaattggaaagagtcttgattgaatatcaca 29111520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 657064 - 656995
Alignment:
Q  143 aatttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaaga 213  Q
    |||||||||||||| |||||||| || ||| |||||||||||||||||||| ||||||||||| |||||||    
T  657064 aatttgaatgatttagaataccactagact-ttttttaagtgattaagagtcttgattgaataccacaaga 656995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 30385142 - 30385224
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||  | ||| ||||||||||||| || | |||||||||||||    
T  30385142 atttattaaacaatccttcgaaatttgaatgattttgaataccacaagact-ttttttaagtgatgaaaatttttgattgaata 30385224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 34759135 - 34759217
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||  | ||| ||||||||||||| || ||| |||||||||||    
T  34759135 atttattaaacaatccttggaaatttgaatgattttgaataccacaagact-ttttttaagtgatgaaaagtcttgattgaata 34759217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 213
Target Start/End: Complemental strand, 7497196 - 7497106
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaaga 213  Q
    |||||||||| | ||||| ||| |||||||||||||||||||||  | ||| ||||||||||||| || | | ||||||||||| |||||||    
T  7497196 atttattaaacactccttcgaaatttgaatgattttgaataccacaagact-ttttttaagtgatgaaaaatcttgattgaataccacaaga 7497106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 31895816 - 31895734
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||  | ||| |||||||| |||| || ||| |||||||||||    
T  31895816 atttattaaacaatccttcgaaatttgaatgattttgaataccacaagact-ttttttaaatgatgaaaagtcttgattgaata 31895734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 3e-32; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 116 - 294
Target Start/End: Complemental strand, 21147195 - 21147017
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||||||||||| || ||| |||||||||||||||||||| ||||||||||| |||||||     
T  21147195 aaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagact-ttttttaagtgattaagagtcttgattgaataccacaagac 21147097  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||| |||||| ||| |||||||||||||       |||| | ||||||||||||||||||||||||    
T  21147096 tttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaataccaca 21147017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 116 - 294
Target Start/End: Original strand, 33656119 - 33656299
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| ||||||| ||| |||||||||||||||||||||||| | | |||||||||||||||||||| ||||||||||| |||||||     
T  33656119 aaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccattagatt-ttttttaagtgattaagagtcttgattgaataccacaagac 33656217  T
Q  215 nnnnnnnaaatggcaaaa--aatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||||  |||||| ||| |||||||||||||       |||| | ||||||||||||||||||||||||    
T  33656218 tttttttaaatgacaaaaagaatcttgattgaataacacaagactttttttaaattgaaaagagtcttgattgaataccaca 33656299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 116 - 213
Target Start/End: Complemental strand, 849275 - 849178
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaaga 213  Q
    ||||||||||||||||| ||||||| ||| |||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||| |||||||    
T  849275 aaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccattagact-ttttttaagtgattaagagtcttgattgaataccacaaga 849178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 116 - 294
Target Start/End: Original strand, 32157975 - 32158155
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    |||||| |||||||||| ||||||| ||| ||||||||||||||||||||| || ||| ||||||||||||||| | || ||||||||||| |||||||     
T  32157975 aaatctaatttattaaacaatccttcgaaatttgaatgattttgaataccactagacttttttttaagtgattaggggtcttgattgaataccacaagac 32158074  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagac-nnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||| |||||| ||| |||||||||||||        |||| | ||||||||||||||||||||||||    
T  32158075 tttttttaaatgacaaagaatcttgattgaataacacaagacttttttttaaattgaaaagagtcttgattgaataccaca 32158155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 116 - 205
Target Start/End: Original strand, 7016817 - 7016906
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||||||||||| || ||| |||||||||||||||||||| |||||||||||    
T  7016817 aaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagact-ttttttaagtgattaagagtcttgattgaata 7016906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 116 - 290
Target Start/End: Original strand, 27459028 - 27459201
Alignment:
Q  116 aaatctgatttattaaataatcctttgaatt-tgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    |||||| |||||||||| |||||||  || | ||||||||||||||||||| || |||  ||||||||||||||||||| |||||||||||  ||||||     
T  27459028 aaatctaatttattaaacaatccttcaaaatctgaatgattttgaataccactagact--tttttaagtgattaagagtcttgattgaatactacaagac 27459125  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaatac 290  Q
           ||||| |||| |||||||||| |||||||||||||       |||| | ||||||||||||||||||||    
T  27459126 tttttttaaatgacaaagaatcttaattgaataacacaagactttttttaaattggaaagagtcttgattgaatac 27459201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 116 - 290
Target Start/End: Complemental strand, 139401 - 139227
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||| ||||||||| ||||||| ||| ||||||||||||||||||||| || ||| |||||||||||||||| ||| ||||||||||| |||| ||     
T  139401 aaatctggtttattaaacaatccttcgaaatttgaatgattttgaataccactagact-ttttttaagtgattaaaagtcttgattgaataccacatgac 139303  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaatac 290  Q
           ||||| |||| |||||| ||| |||||||||| ||       |||| | ||||||||||||||||||||    
T  139302 tttttttaaatgacaaagaatcttgattgaataacacaaaactttttttaaattgaaaagagtcttgattgaatac 139227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 116 - 205
Target Start/End: Original strand, 5272997 - 5273086
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    ||||||||||||||||| |||| || ||| ||||||||||||||||||||| || ||| |||||||| ||||||||||| |||||||||||    
T  5272997 aaatctgatttattaaacaatcattcgaaatttgaatgattttgaataccactagact-ttttttaaatgattaagagtcttgattgaata 5273086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 205
Target Start/End: Complemental strand, 6460920 - 6460831
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    ||||||||||||||||| || |||| ||| ||||||||||||||||||||| || | | |||||||| ||||||||||| |||||||||||    
T  6460920 aaatctgatttattaaacaaaccttcgaaatttgaatgattttgaataccactagatt-ttttttaaatgattaagagtcttgattgaata 6460831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 9220796 - 9220882
Alignment:
Q  127 attaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaaga 213  Q
    |||||| ||||||| ||| |||||||||||||||||| ||| | ||| ||||||||||||| |||||| ||||||||||| |||||||    
T  9220796 attaaacaatccttagaaatttgaatgattttgaatatcataagact-ttttttaagtgataaagagtcttgattgaatatcacaaga 9220882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 4240537 - 4240619
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||  | ||| ||||||||||||| || ||| |||||||||||    
T  4240537 atttattaaacaatccttcgaaatttgaatgattttgaataccacaagact-ttttttaagtgatgaaaagtcttgattgaata 4240619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 4550342 - 4550424
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||  | ||| ||||||||||||| || ||| |||||||||||    
T  4550342 atttattaaacaatccttcgaaatttgaatgattttgaataccacaagact-ttttttaagtgatgaaaagtcttgattgaata 4550424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 205
Target Start/End: Original strand, 14465305 - 14465394
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    ||||| ||||||||||| |||| || ||| |||||||||||||||||||||  | ||| ||||||||| ||| |||||| |||||||||||    
T  14465305 aaatccgatttattaaacaatctttcgaaatttgaatgattttgaataccacaagact-ttttttaagcgatgaagagtcttgattgaata 14465394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 1152188 - 1152270
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| ||||| | ||| |||||||||||||||||||||  | ||| ||||||||||||| || ||| |||||||||||    
T  1152188 atttattaaacaatccctcgaaatttgaatgattttgaataccacaagact-ttttttaagtgataaaaagtcttgattgaata 1152270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 213
Target Start/End: Original strand, 16894038 - 16894077
Alignment:
Q  174 ttttttaagtgattaagagttttgattgaataacacaaga 213  Q
    |||||||||||||||||||| ||||||||||| |||||||    
T  16894038 ttttttaagtgattaagagtcttgattgaataccacaaga 16894077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 22746418 - 22746336
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| |||| || ||| |||||||||||||||||| ||  | ||| ||||||||||||| || |||||||||||||||    
T  22746418 atttattaaacaatcattcgaaatttgaatgattttgaatatcacaagact-ttttttaagtgatgaaaagttttgattgaata 22746336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 205
Target Start/End: Complemental strand, 9689785 - 9689697
Alignment:
Q  116 aaatctgatttattaaataatcctttgaatttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||| |||||| ||| |||| || ||| || ||||||||| |||||||  | ||| ||||||||||||| |||||| |||||||||||    
T  9689785 aaatctaatttatcaaacaatcattcgaaatttaatgattttaaataccacaagact-ttttttaagtgatgaagagtcttgattgaata 9689697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 3e-32; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 116 - 294
Target Start/End: Complemental strand, 16269820 - 16269642
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||||||||||| || ||| |||||||||||||||||||| ||||||||||| |||||||     
T  16269820 aaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagact-ttttttaagtgattaagagtcttgattgaataccacaagac 16269722  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||| |||||| ||| |||||||||||||       |||| | ||||||||||||||||||||||||    
T  16269721 tttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaataccaca 16269642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 116 - 294
Target Start/End: Complemental strand, 1789571 - 1789393
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||| || ||||     
T  1789571 aaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagact-ttttttaagtgattaagagttttgattgaatatcataagac 1789473  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||| |||||| ||| |||||||||||||       |||| | ||||||| ||||||||||||||||    
T  1789472 tttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagttttgattgaataccaca 1789393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 116 - 294
Target Start/End: Complemental strand, 20605365 - 20605187
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| ||||||| ||| ||| ||||||||||||||||| || ||| |||||||||||||||||||| ||||||||||| |||||||     
T  20605365 aaatctgatttattaaacaatccttcgaaattttaatgattttgaataccactagact-ttttttaagtgattaagagtcttgattgaataccacaagac 20605267  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||| |||||| ||| |||||||||||||       |||| | ||||||||||||||||||||||||    
T  20605266 tttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaataccaca 20605187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 116 - 294
Target Start/End: Complemental strand, 24776484 - 24776306
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||||||||||| || ||| |||||||||||||||||||| ||||||||||| |||||||     
T  24776484 aaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagact-ttttttaagtgattaagagtcttgattgaataccacaagac 24776386  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||| |||||| ||| |||||||||||||       ||||   ||||||||||||||||||||||||    
T  24776385 tttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattagaaagagtcttgattgaataccaca 24776306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 116 - 294
Target Start/End: Original strand, 31170705 - 31170883
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||||||||||| || ||| |||||||||||||||||||| ||||||||||| |||||||     
T  31170705 aaatctgatttattaaacaatccttggaaatttgaatgattttgaataccactagact-ttttttaagtgattaagagtcttgattgaataccacaagac 31170803  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||| |||||| ||| |||||||||||||       |||| | ||||||||||||||||||| ||||    
T  31170804 tttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaatatcaca 31170883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 116 - 294
Target Start/End: Complemental strand, 35317191 - 35317013
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||||||||||| || ||| |||||||||||||||||||| |||||||||||  ||||||     
T  35317191 aaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagact-ttttttaagtgattaagagtcttgattgaatattacaagac 35317093  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||| |||||| ||| |||||||||| ||       |||| | ||||||||||||||||||||||||    
T  35317092 tttttttaaatgacaaagaatcttgattgaataacacaaaactttttttaaattggaaagagtcttgattgaataccaca 35317013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 116 - 294
Target Start/End: Original strand, 5093128 - 5093306
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| |||||||  || ||||||||||||||||||| | || ||| ||||||||||||||||| || ||||||||||| |||||||     
T  5093128 aaatctgatttattaaacaatccttcaaaatttgaatgattttgaatactactagact-ttttttaagtgattaagcgtcttgattgaataccacaagac 5093226  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||| |||||| ||| |||||||||||||       |||| | ||||||||||||||||||||||||    
T  5093227 tttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaataccaca 5093306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 116 - 294
Target Start/End: Complemental strand, 12407509 - 12407331
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| |||||||  || ||||||||||||||||||||| || ||| |||||||||||||||||||| | ||||||||| |||||||     
T  12407509 aaatctgatttattaaacaatccttcaaaatttgaatgattttgaataccactagact-ttttttaagtgattaagagtctcgattgaataccacaagac 12407411  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||| |||||| ||| |||||||||||||       |||| | ||||| ||||||||||||||||||    
T  12407410 tttttttaaatgacaaagaatcttgattgaataacacaagacttttttaaaattgaaaagaatcttgattgaataccaca 12407331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 115 - 294
Target Start/End: Original strand, 305545 - 305725
Alignment:
Q  115 gaaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaaga 213  Q
    |||||||||||||||||| |||| ||  || ||||||||||||||||||||| || ||| |||||||||||||||||||| ||||||||||| |||||||    
T  305545 gaaatctgatttattaaacaatcattcaaaatttgaatgattttgaataccactagact-ttttttaagtgattaagagtcttgattgaataccacaaga 305643  T
Q  214 nnnnnnnnaaatggcaaaaaatcttaattaaataacacaagac-nnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
            ||||| |||| |||||| ||| |||||||||||||        |||| | ||||||||||||||||||||||||    
T  305644 cttttttcaaatgacaaataatcttgattgaataacacaagacttttttttaaattggaaagagtcttgattgaataccaca 305725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 116 - 213
Target Start/End: Original strand, 14198658 - 14198755
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaaga 213  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||||||||||| |  ||| |||||||||||||||||||| ||||||||||| |||||||    
T  14198658 aaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactggact-ttttttaagtgattaagagtcttgattgaataccacaaga 14198755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 119 - 256
Target Start/End: Complemental strand, 43847772 - 43847635
Alignment:
Q  119 tctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagannnn 217  Q
    |||||||||||||| ||||||| ||| ||||||||||||||||||| | || ||| |||||||||||||||||||| ||||||||||| |||||||        
T  43847772 tctgatttattaaacaatccttcgaaatttgaatgattttgaatacaactagact-ttttttaagtgattaagagtcttgattgaataccacaagacttt 43847674  T
Q  218 nnnnaaatggcaaaaaatcttaattaaataacacaagac 256  Q
        ||||| |||| |||||| ||| |||||||||||||    
T  43847673 ttttaaatgacaaagaatcttgattgaataacacaagac 43847635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 116 - 294
Target Start/End: Complemental strand, 44765904 - 44765726
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    |||||| |||||||||| |||| || ||| ||||||||||||||||||||| || ||| |||||||||||||||||||| | ||||||||| |||||||     
T  44765904 aaatcttatttattaaacaatctttcgaaatttgaatgattttgaataccactagact-ttttttaagtgattaagagtctcgattgaataccacaagac 44765806  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||| |||||| ||| |||||||||||||       |||| | ||||||| ||||||||||||||||    
T  44765805 tttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagttttgattgaataccaca 44765726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 10125378 - 10125460
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| ||||||||||| |||||||||||||||||| ||| | ||| ||||||||||||| || |||||||||||||||    
T  10125378 atttattaaacaatcctttgaaatttgaatgattttgaatatcatgagact-ttttttaagtgatgaaaagttttgattgaata 10125460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 116 - 294
Target Start/End: Complemental strand, 32125382 - 32125201
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtg---attaagagttttgattgaataacacaa 211  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||||||||||| |  ||| |||||||| ||   ||||||||| ||||||||||| ||||     
T  32125382 aaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccacttgact-ttttttaaatgatcattaagagtcttgattgaataccacat 32125284  T
Q  212 gannnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
    ||        ||||| |||| ||| || ||| |||||||||||||       |||| | ||||||||||||||||||||||||    
T  32125283 gactttttttaaatgacaaagaattttgattgaataacacaagactttttttaaattgaaaagagtcttgattgaataccaca 32125201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 213
Target Start/End: Complemental strand, 9120255 - 9120158
Alignment:
Q  116 aaatctgatttattaaataatcctttgaatt-tgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaaga 213  Q
    |||||| |||||||||| |||||||| || | |||||||||||||||| || || | | |||||||||||||||||| | |||||||||||||||||||    
T  9120255 aaatctaatttattaaacaatcctttaaaatctgaatgattttgaatatcactagatt-ttttttaagtgattaagaatcttgattgaataacacaaga 9120158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 143 - 294
Target Start/End: Original strand, 22551872 - 22552022
Alignment:
Q  143 aatttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagannnnnnnnaaatggcaaaaaatcttaatt 242  Q
    ||||||||| ||||||||||||| || ||| |||||||||||||||| ||| ||||||||||| |||||||        ||||| |||| |||||| |||    
T  22551872 aatttgaataattttgaataccactagact-ttttttaagtgattaaaagtcttgattgaataccacaagactttttttaaatgacaaagaatcttgatt 22551970  T
Q  243 aaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
     |||||||||||||       |||| | ||| | ||||||||||||||||||    
T  22551971 gaataacacaagactttttttaaattggaaaaaatcttgattgaataccaca 22552022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 123 - 213
Target Start/End: Complemental strand, 379059 - 378969
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaaga 213  Q
    |||||||||| |||||||  || |||||||||||||||||||||| ||||| |||||||| |||  || ||||||||||||||| |||||||    
T  379059 atttattaaacaatccttcaaaatttgaatgattttgaataccatgaaact-ttttttaaatgagaaaaagttttgattgaataccacaaga 378969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 205
Target Start/End: Original strand, 26601281 - 26601370
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    ||||||||||||||||| || | || ||| |||||||||||||||||||||    ||| |||||||||||||||||||| |||||||||||    
T  26601281 aaatctgatttattaaacaaacattcgaaatttgaatgattttgaataccacgtgact-ttttttaagtgattaagagtcttgattgaata 26601370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 205
Target Start/End: Complemental strand, 28844684 - 28844595
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||| |||||||||| ||||||| ||| |||||||||||||||||||||  | ||| ||||||||||||| || ||| |||||||||||    
T  28844684 aaatctaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagact-ttttttaagtgatgaaaagtcttgattgaata 28844595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 28740371 - 28740453
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||  | ||| ||||||||||||| || ||| |||||||||||    
T  28740371 atttattaaacaatccttcgaaatttgaatgattttgaataccacaagact-ttttttaagtgatgaaaagtcttgattgaata 28740453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 33135745 - 33135663
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||  | ||| ||||||||||||| || ||| |||||||||||    
T  33135745 atttattaaacaatccttcgaaatttgaatgattttgaataccacgagact-ttttttaagtgatgaaaagtcttgattgaata 33135663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 205
Target Start/End: Original strand, 215324 - 215395
Alignment:
Q  134 aatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    ||||||||||| |||||||||||||||||||||  | ||| ||||||||||||| || ||| |||||||||||    
T  215324 aatcctttgaagtttgaatgattttgaataccacgagact-ttttttaagtgatgaaaagtcttgattgaata 215395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 3574969 - 3574887
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| ||||||| ||| |||||||||||||||||| ||  | ||| ||||||||||||| || ||| |||||||||||    
T  3574969 atttattaaacaatccttcgaaatttgaatgattttgaatatcacaagact-ttttttaagtgatgaaaagtcttgattgaata 3574887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 6224635 - 6224718
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||||||||||| ||| ||||||| |||||||||||||  | ||| ||||| ||||||| || | | |||||||||||    
T  6224635 atttattaaataatccttcgaaatttgaataattttgaataccacaagactttttttaaagtgatgaaaaatcttgattgaata 6224718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 7026726 - 7026644
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||  | ||| |||||||| |||| || ||| |||||||||||    
T  7026726 atttattaaacaatccttcgaaatttgaatgattttgaataccacaagact-ttttttaaatgatgaaaagtcttgattgaata 7026644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 10657528 - 10657446
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| |||| || ||| |||||||||||||||||||||  | ||| ||||||||||||| || ||| |||||||||||    
T  10657528 atttattaaacaatcattcgaaatttgaatgattttgaataccacaagact-ttttttaagtgatgaaaagtcttgattgaata 10657446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 13833510 - 13833592
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| |||||||  || |||||||||||||||||||||  | ||| ||||||||||||| || ||| |||||||||||    
T  13833510 atttattaaacaatccttcaaaatttgaatgattttgaataccagaagact-ttttttaagtgatgaaaagtcttgattgaata 13833592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 127 - 205
Target Start/End: Complemental strand, 18177385 - 18177307
Alignment:
Q  127 attaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||| ||||||| ||| |||||||||||||||||||||  ||||| |||||||| |||| || ||| |||||||||||    
T  18177385 attaaacaatccttcgaaatttgaatgattttgaataccacaaaact-ttttttaaatgatgaaaagtcttgattgaata 18177307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 70; Significance: 1e-31; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 116 - 256
Target Start/End: Original strand, 33807877 - 33808018
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||||||||||| || ||| |||||||||||||||||||| ||||||||||| |||||||     
T  33807877 aaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacttttttttaagtgattaagagtcttgattgaataccacaagac 33807976  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagac 256  Q
           ||||| |||| |||||||||| |||||||||||||    
T  33807977 tttttttaaatgacaaagaatcttaattgaataacacaagac 33808018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 116 - 294
Target Start/End: Complemental strand, 19253954 - 19253776
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    |||||| |||||||||| ||||||| ||| ||||||||||||||||||||| || ||| |||||||||||||||||||| ||||||||||| |||||||     
T  19253954 aaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagact-ttttttaagtgattaagagtcttgattgaataccacaagac 19253856  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||| |||||| ||| |||||||||||||       |||| | ||||||||||||||||||||||||    
T  19253855 tttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaataccaca 19253776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 116 - 294
Target Start/End: Complemental strand, 20498336 - 20498158
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||||||||||| || ||| |||||||||||||||||||| ||||||||||| |||||||     
T  20498336 aaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagact-ttttttaagtgattaagagtcttgattgaataccacaagac 20498238  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||| |||||| ||| |||||||||| ||       |||| | ||||||||||||||||||||||||    
T  20498237 tttttttaaatgacaaagaatcttgattgaataacacaaaactttttttaaattggaaagagtcttgattgaataccaca 20498158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 116 - 294
Target Start/End: Original strand, 37820556 - 37820734
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||||||||||| || ||| |||||||||||||||||| | ||||||||||| |||||||     
T  37820556 aaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagact-ttttttaagtgattaagaatcttgattgaataccacaagaa 37820654  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||| |||||| ||| |||||||||||||       |||| | ||||||||||||||||||||||||    
T  37820655 tttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaataccaca 37820734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 116 - 294
Target Start/End: Original strand, 10139225 - 10139403
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||||||||||| || ||| |||||||||||||||||||| ||||||||||| |||||||     
T  10139225 aaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagact-ttttttaagtgattaagagtcttgattgaataccacaagac 10139323  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           |||||  ||  |||||| ||| |||||||||||||       |||| | ||||||||||||||||||||||||    
T  10139324 tttttttaaatgataaggaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaataccaca 10139403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 116 - 294
Target Start/End: Original strand, 996165 - 996342
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||||||||||| || ||| |||||||||||||||||| | ||||||||||| |||||||     
T  996165 aaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagact-ttttttaagtgattaagaatcttgattgaataccacaagac 996263  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           |||||  ||| |||||| ||| |||||||||||||       || ||| ||||||||||||||||||||||||    
T  996264 ttttttgaaatgataaagaatcttgattgaataacacaagactttttttaattgg-aaagagtcttgattgaataccaca 996342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 116 - 213
Target Start/End: Original strand, 3206284 - 3206381
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaaga 213  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||||||||||| || ||| |||||||||||||||||||| ||||||||||| |||||||    
T  3206284 aaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagact-ttttttaagtgattaagagtcttgattgaataccacaaga 3206381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 116 - 294
Target Start/End: Complemental strand, 35337862 - 35337684
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| ||||||| ||| |||||||  |||||||||||| || ||| |||||||||||||||||||| ||||||||||| |||||||     
T  35337862 aaatctgatttattaaacaatccttcgaaatttgaatttttttgaataccactagact-ttttttaagtgattaagagtcttgattgaataccacaagac 35337764  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||  |||||| ||| |||||||||||||       |||| | ||||||||||||||||||||||||    
T  35337763 ttttttaaaatgacaaggaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaataccaca 35337684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 116 - 256
Target Start/End: Original strand, 3999724 - 3999864
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||||||||||| || | | |||||||||||||||||||| ||||||||||| |||||||     
T  3999724 aaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagatt-ttttttaagtgattaagagtcttgattgaataccacaagac 3999822  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagac 256  Q
           ||||| |||| |||||| ||| |||||||||||||    
T  3999823 tttttttaaatgacaaagaatcttgattgaataacacaagac 3999864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 116 - 211
Target Start/End: Original strand, 1440031 - 1440126
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaa 211  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||||||||||| || ||| |||||||||||||||||||| ||||||||||| |||||    
T  1440031 aaatctgatttattaaacaatccttggaaatttgaatgattttgaataccactagact-ttttttaagtgattaagagtcttgattgaataccacaa 1440126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 116 - 213
Target Start/End: Complemental strand, 6589691 - 6589594
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaaga 213  Q
    ||||||||||||||||||||| ||| ||| ||||||||||||||||||||| || ||| |||||||| ||||||||||| ||||||||||| |||||||    
T  6589691 aaatctgatttattaaataattcttcgaaatttgaatgattttgaataccactagact-ttttttaaatgattaagagtcttgattgaataccacaaga 6589594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 116 - 213
Target Start/End: Original strand, 29448937 - 29449034
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaaga 213  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||||||||||| || ||| |||||||||||||| ||||| ||||||||||| |||||||    
T  29448937 aaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagact-ttttttaagtgattgagagtcttgattgaatatcacaaga 29449034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 116 - 294
Target Start/End: Original strand, 51699559 - 51699736
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    |||||| |||||||||  ||||||| ||| ||||||||||||||||||||| || | |  ||||||||||||||||||| ||||||||||| |||||||     
T  51699559 aaatcttatttattaaccaatccttcgaaatttgaatgattttgaataccactagatt--tttttaagtgattaagagtcttgattgaataccacaagat 51699656  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||| |||||| ||| ||||| |||||||       |||| | ||||||||||||||||||||||||    
T  51699657 tttttttaaatgacaaagaatcttgattgaataatacaagactttttttaaattgaaaagagtcttgattgaataccaca 51699736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 116 - 256
Target Start/End: Complemental strand, 29030132 - 29029993
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| |||||||  || |||||||||||||||||||||   ||  ||||||||||||||||||||| ||||||||||| |||||||     
T  29030132 aaatctgatttattaaacaatccttcaaaatttgaatgattttgaatacca--caagacttttttaagtgattaagagtcttgattgaataccacaagac 29030035  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagac 256  Q
           ||||| |||| | |||||||| |||||||||||||    
T  29030034 tttttttaaatgacaaagagtcttaattgaataacacaagac 29029993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 116 - 213
Target Start/End: Original strand, 33996620 - 33996717
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaaga 213  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||||||||||| |  | | |||||||||||||||||||| ||||||||||| |||||||    
T  33996620 aaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactgga-ttttttttaagtgattaagagtcttgattgaataccacaaga 33996717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 116 - 294
Target Start/End: Original strand, 44762116 - 44762294
Alignment:
Q  116 aaatctgatttattaaataatcctttgaat-ttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| ||||||| |||  |||||| ||||| ||||||| || ||| |||||||||||||||||||| |||||||||||  ||| ||     
T  44762116 aaatctgatttattaaacaatccttcgaaacttgaataattttaaataccactagact-ttttttaagtgattaagagtcttgattgaatactacatgac 44762214  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||| |||||| ||| |||||||||||||       |||| | ||||||||||||||||||||||||    
T  44762215 tttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattgaaaagagtcttgattgaataccaca 44762294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 116 - 213
Target Start/End: Complemental strand, 52114656 - 52114558
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaaga 213  Q
    ||||||||||||||||| ||||||  ||| ||||||| ||||||||||||| || ||| |||||||||||||||| ||| ||||||||||| |||||||    
T  52114656 aaatctgatttattaaacaatcctgcgaaatttgaattattttgaataccactagacttttttttaagtgattaaaagtcttgattgaataccacaaga 52114558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 116 - 205
Target Start/End: Complemental strand, 54625719 - 54625630
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    ||||||||||||||||| ||||||| ||| ||||||| ||||||||||||| || ||| |||||||||||||||||||| |||||||||||    
T  54625719 aaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagact-ttttttaagtgattaagagtcttgattgaata 54625630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 116 - 294
Target Start/End: Complemental strand, 25418493 - 25418315
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| |||||||| || ||||||||||||||||||||  || | | |||| ||||||||||| ||| ||||||||||| |||||||     
T  25418493 aaatctgatttattaaacaatcctttcaaatttgaatgattttgaataccgctagatt-ttttgtaagtgattaaaagtcttgattgaataccacaagac 25418395  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||| |||||| ||| |||||||||||||       |||  | ||||||| ||||||||||||||||    
T  25418394 tttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaaatggaaagagttttgattgaataccaca 25418315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 116 - 213
Target Start/End: Original strand, 53929207 - 53929304
Alignment:
Q  116 aaatctgatttattaaataatcctttga-atttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaaga 213  Q
    |||||| |||||||||| |||| || || |||| ||||||||||||||||| || ||| |||||||||||||||||||| ||||||||||| |||||||    
T  53929207 aaatcttatttattaaacaatcgttcgatatttaaatgattttgaataccactagact-ttttttaagtgattaagagtcttgattgaataccacaaga 53929304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 116 - 211
Target Start/End: Complemental strand, 40246971 - 40246876
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaa 211  Q
    ||||||||||||||||| |||||||  || ||||||||||||||||||||| || ||| |||||||| ||||||| ||| ||||||||||| |||||    
T  40246971 aaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagact-ttttttaactgattaatagtcttgattgaataccacaa 40246876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 40897264 - 40897182
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||| | ||| ||||||||||||| || ||| |||||||||||    
T  40897264 atttattaaacaatccttcgaaatttgaatgattttgaataccataagact-ttttttaagtgatgaaaagtcttgattgaata 40897182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 205
Target Start/End: Complemental strand, 27899471 - 27899382
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    ||||||||||||||||| ||||||| ||| |||||||||||||||||||||  | ||| |||||||| |||  |||||| |||||||||||    
T  27899471 aaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccaccagact-ttttttaaatgacaaagagtcttgattgaata 27899382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 212
Target Start/End: Complemental strand, 22057889 - 22057793
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaag 212  Q
    ||||||||||||||||| ||||| | ||| ||||||||||||| ||||||| || | | ||||||||||||| |||||| ||||| ||||| ||||||    
T  22057889 aaatctgatttattaaacaatccatcgaaatttgaatgattttaaataccactagatt-ttttttaagtgatcaagagtcttgatggaataccacaag 22057793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 123 - 210
Target Start/End: Complemental strand, 5825182 - 5825095
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacaca 210  Q
    |||||||||| |||||||  || |||||||||||||||||||||| ||||| |||||||| |||  || ||||||||||||||| ||||    
T  5825182 atttattaaacaatccttcaaaatttgaatgattttgaataccatgaaact-ttttttaaatgagaaaaagttttgattgaataccaca 5825095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 17946408 - 17946326
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| ||||||||||| |||||||||||||||||| ||  | ||| ||||||||||||| || ||| |||||||||||    
T  17946408 atttattaaacaatcctttgaaatttgaatgattttgaatatcacgagact-ttttttaagtgatgaaaagtcttgattgaata 17946326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 18749732 - 18749650
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||  | ||| ||||||||||||| || |||||| ||||||||    
T  18749732 atttattaaacaatccttcgaaatttgaatgattttgaataccacaagact-ttttttaagtgatgaaaagtttttattgaata 18749650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 294
Target Start/End: Original strand, 23753472 - 23753643
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagannnnnnnn 221  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||  | ||| |||||||| |||| || ||| ||||||||||| | |||||            
T  23753472 atttattaaacaatccttcgaaatttgaatgattttgaataccacaagact-ttttttaaatgatgaaaagtcttgattgaatacctcaagactttttta 23753570  T
Q  222 aaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
    ||||| |||| |||||| ||| |||| ||||||||       |||| | ||| ||||||||||||||||||||    
T  23753571 aaatgacaaagaatcttgattgaataccacaagactttttttaaattgcaaaaagtcttgattgaataccaca 23753643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 34484116 - 34484198
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||  ||||| |||||||| |||| || ||| |||||||||||    
T  34484116 atttattaaacaatccttcgaaatttgaatgattttgaataccacaaaact-ttttttaaatgatgaaaagtcttgattgaata 34484198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 44906599 - 44906681
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||  | ||| ||||||||||||| || ||| |||||||||||    
T  44906599 atttattaaacaatccttcgaaatttgaatgattttgaataccacaagact-ttttttaagtgatgaaaagtcttgattgaata 44906681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 51737812 - 51737894
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||  | ||| ||||||||||||| || ||| |||||||||||    
T  51737812 atttattaaacaatccttcgaaatttgaatgattttgaataccacaagact-ttttttaagtgatgaaaagtcttgattgaata 51737894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 52618051 - 52618133
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||  | ||| ||||||||||||| || ||| |||||||||||    
T  52618051 atttattaaacaatccttcgaaatttgaatgattttgaataccacaagact-ttttttaagtgatgaaaagtcttgattgaata 52618133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 188
Target Start/End: Complemental strand, 52080054 - 52079982
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgatta 188  Q
    ||||||||||||||||| |||||||  || ||||||||||||||||||||| || | | |||||||||||||||    
T  52080054 aaatctgatttattaaacaatccttcaaaatttgaatgattttgaataccactaga-ttttttttaagtgatta 52079982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 44276505 - 44276427
Alignment:
Q  123 atttattaaataatcctttgaatttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| ||||||   |||||||||||||||||||||||| | ||| ||||||||||||| || | | |||||||||||    
T  44276505 atttattaaacaatcct---aatttgaatgattttgaataccatgagact-ttttttaagtgatgaaaaatcttgattgaata 44276427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 55235304 - 55235223
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| |||| || ||| |||||||||||||||||| ||| | |||  ||||||| |||| ||||||||||||||||||    
T  55235304 atttattaaacaatctttcgaaatttgaatgattttgaatatcatgagact--tttttaattgatgaagagttttgattgaata 55235223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 165
Target Start/End: Original strand, 539490 - 539533
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaatacca 165  Q
    |||||||||||||||||| ||| |||||||||||||||||||||    
T  539490 atttattaaataatccttcgaaatttgaatgattttgaatacca 539533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 10660655 - 10660573
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||  | ||| |||||||| |||| || ||| |||||||||||    
T  10660655 atttattaaacaatccttcgaaatttgaatgattttgaataccacaatact-ttttttaaatgatgaaaagtcttgattgaata 10660573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 205
Target Start/End: Original strand, 15492968 - 15493028
Alignment:
Q  143 aatttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||||||||||||||||| | |  | |||||||||||| || |||||||||||||||    
T  15492968 aatttgaatgattttgaataccatgaga--catttttaagtgatgaaaagttttgattgaata 15493028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 20833112 - 20833030
Alignment:
Q  123 atttattaaataatccttt-gaatttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| |||||||  ||||||||||||||||||||||||  | ||| ||||||||||||| || | | |||||||||||    
T  20833112 atttattaaacaatccttccgaatttgaatgattttgaataccacaagact-ttttttaagtgatgaaaattcttgattgaata 20833030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 26107381 - 26107299
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||  | ||| |||||||| |||| || ||| |||||||||||    
T  26107381 atttattaaacaatccttcgaaatttgaatgattttgaataccacaagact-ttttttaattgatgaaaagtcttgattgaata 26107299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 48379277 - 48379195
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||  | ||| ||||||||||||| || ||| | |||||||||    
T  48379277 atttattaaacaatccttcgaaatttgaatgattttgaataccacaagact-ttttttaagtgatgaaaagtctagattgaata 48379195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 165
Target Start/End: Complemental strand, 54628964 - 54628921
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaatacca 165  Q
    |||||||||| ||||||||||| |||||||||||||||||||||    
T  54628964 atttattaaacaatcctttgaaatttgaatgattttgaatacca 54628921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 205
Target Start/End: Complemental strand, 12103728 - 12103667
Alignment:
Q  143 aatttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||||||||||||||||| | ||| ||||||||||||| || | | |||||||||||    
T  12103728 aatttgaatgattttgaataccatgagact-ttttttaagtgatgaaaaatcttgattgaata 12103667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 204
Target Start/End: Original strand, 23535918 - 23535977
Alignment:
Q  143 aatttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaat 204  Q
    |||||||||||||||||||||||  | ||| ||||||||||||| ||||| |||||||||||    
T  23535918 aatttgaatgattttgaataccacaagact-ttttttaagtgatgaagag-tttgattgaat 23535977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 116 - 294
Target Start/End: Original strand, 15112 - 15290
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||||||||||| || ||| |||||||||||||||||||| |||||||||||  ||||||     
T  15112 aaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagact-ttttttaagtgattaagagtcttgattgaatactacaagac 15210  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||| |||||| ||| |||||||||||||       |||| | ||||||||||||||||||||||||    
T  15211 tttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaataccaca 15290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 116 - 294
Target Start/End: Original strand, 15755 - 15933
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||||||||||| || ||| |||||||||||||||||||| |||||||||||  ||||||     
T  15755 aaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagact-ttttttaagtgattaagagtcttgattgaatactacaagac 15853  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||| |||||| ||| |||||||||||||       |||| | ||||||||||||||||||||||||    
T  15854 tttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaataccaca 15933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 8e-30; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 116 - 294
Target Start/End: Complemental strand, 730270 - 730091
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| ||| | | ||| ||||||||||||||||||||| || ||| |||||||||||||||||||| ||||||||||| |||||||     
T  730270 aaatctgatttattaaacaattcgtcgaaatttgaatgattttgaataccactagacttttttttaagtgattaagagtcttgattgaataccacaagac 730171  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||| |||||| ||| |||||||||||||       |||| | ||||||||||||||||||||||||    
T  730170 tttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaataccaca 730091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 116 - 294
Target Start/End: Original strand, 47654430 - 47654610
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| ||||||| ||| ||||||| ||||||||||||| || ||| |||||||||||||||||||||||||||||||| |||||||     
T  47654430 aaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagacttttttttaagtgattaagagttttgattgaataccacaagac 47654529  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacac-aagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||| |||||| ||| |||||||| |||||       |||| | ||||||||||||| ||||||||||    
T  47654530 ttcttttaaatgacaaagaatcttgattgaataacacaaagactttttttaaattggaaagagtcttgatcgaataccaca 47654610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 116 - 294
Target Start/End: Original strand, 19451887 - 19452065
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    |||||||||||||||||  |||||| ||| ||||||||||||||||||||| || ||| |||||||||||||||||||| |||||| |||| |||||||     
T  19451887 aaatctgatttattaaacgatccttcgaaatttgaatgattttgaataccactagact-ttttttaagtgattaagagtcttgattaaataccacaagac 19451985  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||| |||||| ||| |||||||||||||       |||| | ||||||||||||||||||||||||    
T  19451986 tttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaataccaca 19452065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 116 - 294
Target Start/End: Complemental strand, 35279793 - 35279615
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| ||||||| ||| ||| ||||||||||||||||| || ||| |||||||||||||||| ||| ||||||||||| |||||||     
T  35279793 aaatctgatttattaaacaatccttcgaaatttaaatgattttgaataccactagact-ttttttaagtgattaatagtcttgattgaataccacaagac 35279695  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||| |||||| ||| ||||||||||| |       |||| | ||||||||||||||||||||||||    
T  35279694 tttttttaaatgacaaagaatcttgattgaataacacaagtctttttttaaattggaaagagtcttgattgaataccaca 35279615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 116 - 213
Target Start/End: Original strand, 50192629 - 50192727
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaaga 213  Q
    ||||||||||||||||| |||||||  || ||||||||||||||||||||| || ||| |||||||||||||||||||| ||||||||||| |||||||    
T  50192629 aaatctgatttattaaacaatccttcaaaatttgaatgattttgaataccactagacttttttttaagtgattaagagtcttgattgaataccacaaga 50192727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 116 - 210
Target Start/End: Original strand, 45760088 - 45760182
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacaca 210  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||||||||||| || ||| |||||||||||||||||||| ||||||||||| ||||    
T  45760088 aaatctgatttattaaacaatccttcgaagtttgaatgattttgaataccactagact-ttttttaagtgattaagagtcttgattgaataccaca 45760182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 116 - 210
Target Start/End: Complemental strand, 49418205 - 49418111
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacaca 210  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||| || ||| |||||||||||||||||||| || |||||||| ||||    
T  49418205 aaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactagact-ttttttaagtgattaagagtcttaattgaataccaca 49418111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 116 - 294
Target Start/End: Complemental strand, 21222268 - 21222091
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    |||||| |||||||||| ||||||| ||| ||||||||||||||||||||  || ||| |||||||||||||||||||| ||||||||||| |||||||     
T  21222268 aaatcttatttattaaacaatccttcgaaatttgaatgattttgaatacctctagact-ttttttaagtgattaagagtcttgattgaataccacaagac 21222170  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||| |||||| ||| |||||||||| ||       |||| | ||||||||||||||||||||||||    
T  21222169 tttttttaaatgacaaagaatcttgattgaataacacaa-actttttttaaattgaaaagagtcttgattgaataccaca 21222091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 116 - 294
Target Start/End: Complemental strand, 29556225 - 29556047
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    |||||| |||||||||| |||| || ||| |||||||||||||||||| || || | | |||||||||||||||||||| |||||||||||||||||||     
T  29556225 aaatctaatttattaaacaatctttcgaaatttgaatgattttgaataacactagatt-ttttttaagtgattaagagtcttgattgaataacacaagac 29556127  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||  |||  |||||||||| |||||||||||||       |||| | ||||||||||||||||||||||||    
T  29556126 tttttttaaataacaatgaatcttaattgaataacacaagactttttttaaattgaaaagagtcttgattgaataccaca 29556047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 116 - 294
Target Start/End: Original strand, 28824452 - 28824629
Alignment:
Q  116 aaatctgatttattaaataatcctttgaatttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagann 215  Q
    ||||||||||||||||| |||| |   |||||||||||||||||||||||  | ||| |||| ||||||||||||||| ||||||||||| |||||||      
T  28824452 aaatctgatttattaaacaatcttcgaaatttgaatgattttgaataccacaagactgtttt-taagtgattaagagtcttgattgaataccacaagact 28824550  T
Q  216 nnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
          ||||| |||| |||||| ||| |||||||||||||       ||||   ||||||||||||||||||||||||    
T  28824551 ttttttaaatgacaaataatcttgattgaataacacaagactttttttaaattagaaagagtcttgattgaataccaca 28824629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 116 - 294
Target Start/End: Original strand, 49198348 - 49198524
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||||||||||| | |||| |||||||||||||||||||| || |||||||| ||||| |     
T  49198348 aaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactgaact-ttttttaagtgattaagagtctt-attgaataccacaaaac 49198445  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||| |||||| ||| |||||||||||||       |||| | ||||||||||||||||||||||||    
T  49198446 tttttttaaatgacaaagaatcttgattgaataacacaagac-ttttttaaattgaaaagagtcttgattgaataccaca 49198524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 116 - 213
Target Start/End: Original strand, 6304331 - 6304429
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagag-ttttgattgaataacacaaga 213  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||||||||||| || ||| ||||||||||||||||||| ||||| ||||||| |||||||    
T  6304331 aaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagact-ttttttaagtgattaagagtttttggttgaataccacaaga 6304429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 116 - 210
Target Start/End: Complemental strand, 47780832 - 47780738
Alignment:
Q  116 aaatctgatttattaaataatcctttgaattt-gaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacaca 210  Q
    ||||||||||||||||| |||||||| ||||| ||||||||||||||| || || ||| |||||||||||||||||||| ||||||||||| ||||    
T  47780832 aaatctgatttattaaacaatccttttaattttgaatgattttgaatatcactagact-ttttttaagtgattaagagtcttgattgaataccaca 47780738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 116 - 294
Target Start/End: Original strand, 35679207 - 35679385
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| ||||||| ||| |||||||||||||||||||||    ||| |||||||||||||||||||| |||||||||||  ||||||     
T  35679207 aaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccacatgact-ttttttaagtgattaagagtcttgattgaatactacaagat 35679305  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||| |||||| ||| |||| ||||||||       |||| | |||||| |||||||||||||||||    
T  35679306 tttttttaaatgacaaagaatcttgattgaataccacaagactttttttaaattgaaaagagccttgattgaataccaca 35679385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 116 - 294
Target Start/End: Complemental strand, 45536065 - 45535887
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    ||||||||||||||||| |||| || ||| ||||||||||||||||||||| || ||| ||||||||| |||||||||| ||||||||||| ||||| |     
T  45536065 aaatctgatttattaaacaatctttcgaaatttgaatgattttgaataccactagact-ttttttaagcgattaagagtcttgattgaataccacaacac 45535967  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||| ||| || ||| |||||||||||||       |||| | ||||||||||||||||||| ||||    
T  45535966 tttgtttaaatgacaaagaatattgattgaataacacaagactttttttaaattggaaagagtcttgattgaatatcaca 45535887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 143 - 290
Target Start/End: Complemental strand, 48524412 - 48524266
Alignment:
Q  143 aatttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagannnnnnnnaaatggcaaaaaatcttaatt 242  Q
    |||||||||||||||||||| ||  | ||| ||||||||||||||||||||||||||| |||| |||| ||        ||||| ||||||||||| |||    
T  48524412 aatttgaatgattttgaatatcacaagact-ttttttaagtgattaagagttttgattaaataccacatgaatttttttaaatgacaaaaaatcttgatt 48524314  T
Q  243 aaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaatac 290  Q
     |||||||||||||       |||| | ||||||||||||||||||||    
T  48524313 gaataacacaagactttttttaaattggaaagagtcttgattgaatac 48524266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 294
Target Start/End: Complemental strand, 22183457 - 22183313
Alignment:
Q  149 aatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagannnnnnnnaaatggcaaaaaatcttaattaaataa 248  Q
    ||||||||||||||||| || ||| |||||||||||||||||| | ||||||||||| |||||||        ||||| |||| |||||| ||| |||||    
T  22183457 aatgattttgaataccactagact-ttttttaagtgattaagaatcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaataa 22183359  T
Q  249 cacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
    ||||| ||       |||| | ||||||||||||||||||||||||    
T  22183358 cacaaaactttttttaaattggaaagagtcttgattgaataccaca 22183313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 116 - 213
Target Start/End: Complemental strand, 33025634 - 33025536
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagag-ttttgattgaataacacaaga 213  Q
    ||||||||| ||||||| |||||||  || |||||||||||||||||||||  | ||| ||||||||||||||||||| ||||||||||||| |||||||    
T  33025634 aaatctgatgtattaaacaatccttcaaaatttgaatgattttgaataccacaagact-ttttttaagtgattaagagtttttgattgaataccacaaga 33025536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 5495182 - 5495264
Alignment:
Q  123 atttattaaataatcctttg-aatttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||||||||||||| ||||| |||||||||||||||||  | ||| ||||||||||||| || ||| |||||||||||    
T  5495182 atttattaaataatcctttgaaatttaaatgattttgaataccacgagact-ttttttaagtgatgaaaagtcttgattgaata 5495264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 49231000 - 49230918
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||||||||||| ||| |||||||||||||||||||||  | ||| ||||||||||||| || ||| |||||||||||    
T  49231000 atttattaaataatccttcgaaatttgaatgattttgaataccacaagact-ttttttaagtgatgaaaagtcttgattgaata 49230918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 29219400 - 29219318
Alignment:
Q  123 atttattaaataatcctt-tgaatttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| ||||||| | |||||||||||||||||||||||  | ||| ||||||||||||| || ||| |||||||||||    
T  29219400 atttattaaacaatccttcttaatttgaatgattttgaataccacaagact-ttttttaagtgatgaaaagtcttgattgaata 29219318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 213
Target Start/End: Original strand, 32589032 - 32589129
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaaga 213  Q
    ||||| ||||||||||| |||||||  || |||||||||||||||||||||  | ||| | ||||||||||| |||||| ||||||||||  |||||||    
T  32589032 aaatccgatttattaaacaatccttcaaaatttgaatgattttgaataccacaagact-tcttttaagtgatgaagagtcttgattgaatgccacaaga 32589129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 6312688 - 6312606
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||  | ||| |||||||| |||| || ||| |||||||||||    
T  6312688 atttattaaacaatccttcgaaatttgaatgattttgaataccacaagact-ttttttaaatgatgaaaagtcttgattgaata 6312606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 9577518 - 9577600
Alignment:
Q  123 atttattaaataatcctt-tgaatttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| ||||||| | |||||||||||||||||||| ||  | ||| ||||||||||||| || |||||||||| ||||    
T  9577518 atttattaaacaatccttctaaatttgaatgattttgaatatcacaagact-ttttttaagtgataaaaagttttgatttaata 9577600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 165
Target Start/End: Original strand, 15835139 - 15835182
Alignment:
Q  123 atttattaaataatcctttg-aatttgaatgattttgaatacca 165  Q
    |||||||||| ||||||||| |||||||||||||||||||||||    
T  15835139 atttattaaacaatcctttgcaatttgaatgattttgaatacca 15835182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 18798605 - 18798523
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||  | ||| |||||||| |||| || ||| |||||||||||    
T  18798605 atttattaaacaatccttcgaaatttgaatgattttgaataccacaagact-ttttttaaatgatgaaaagtcttgattgaata 18798523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 165
Target Start/End: Complemental strand, 25612271 - 25612228
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaatacca 165  Q
    |||||||||| ||||||||||| |||||||||||||||||||||    
T  25612271 atttattaaacaatcctttgaaatttgaatgattttgaatacca 25612228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 29396474 - 29396556
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||  | ||| |||||||| |||| || ||| |||||||||||    
T  29396474 atttattaaacaatccttcgaaatttgaatgattttgaataccacaagact-ttttttaaatgatgaaaagtcttgattgaata 29396556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 205
Target Start/End: Original strand, 31622538 - 31622626
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    ||||| ||||||||||| |||| |||||| ||||||||||||||||||| |   ||  |||||||||||||| |||||| |||||| ||||    
T  31622538 aaatccgatttattaaacaatcttttgaaatttgaatgattttgaatacaa--caatacttttttaagtgatgaagagtcttgatttaata 31622626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 48177548 - 48177630
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| |||| || ||| |||||||||||||||||||||  | ||| ||||||||||||| || | |||||||||||||    
T  48177548 atttattaaacaatcattcgaaatttgaatgattttgaataccacaagact-ttttttaagtgatgaaaaattttgattgaata 48177630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 51701694 - 51701612
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||  | ||| |||||||| |||| || ||| |||||||||||    
T  51701694 atttattaaacaatccttcgaaatttgaatgattttgaataccacaagact-ttttttaaatgatgaaaagtcttgattgaata 51701612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 165
Target Start/End: Original strand, 31572276 - 31572326
Alignment:
Q  116 aaatctgatttattaaataatcctttg-aatttgaatgattttgaatacca 165  Q
    ||||||||||||||||| ||||||| | ||||| |||||||||||||||||    
T  31572276 aaatctgatttattaaacaatccttcgaaatttaaatgattttgaatacca 31572326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 37014747 - 37014816
Alignment:
Q  143 aatttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaaga 213  Q
    |||||||||||||||||||| ||  | ||| ||||||||||||| |||| | ||||||||||| |||||||    
T  37014747 aatttgaatgattttgaatatcacaagact-ttttttaagtgatgaagaatattgattgaataccacaaga 37014816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 163
Target Start/End: Complemental strand, 955871 - 955823
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaatac 163  Q
    ||||||||||||||||| || |||| ||| |||||||||||||||||||    
T  955871 aaatctgatttattaaacaacccttcgaaatttgaatgattttgaatac 955823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 116 - 256
Target Start/End: Complemental strand, 100339 - 100199
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    |||| |||||||||||| ||||||||||| ||||||||||||||||||||| || ||| |||||||||||||||||||| |||||||| || |||||||     
T  100339 aaatttgatttattaaacaatcctttgaaatttgaatgattttgaataccactagact-ttttttaagtgattaagagtcttgattgagtaccacaagac 100241  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagac 256  Q
           ||||| |||| |||||| ||| |||||||||||||    
T  100240 tttttttaaatgacaaagaatcttgattgaataacacaagac 100199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 116 - 213
Target Start/End: Complemental strand, 102223 - 102126
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaaga 213  Q
    ||||||||||||||||| |||| || ||| ||||||||||||||||||||| || ||| |||||||||||||||||||| ||||||||||| |||||||    
T  102223 aaatctgatttattaaacaatctttcgaaatttgaatgattttgaataccactagact-ttttttaagtgattaagagtcttgattgaataccacaaga 102126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 116 - 294
Target Start/End: Original strand, 618 - 796
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaagan 214  Q
    |||| |||||||||||| |||||||  || ||||||||||||||||||||| ||||     ||| |||||||||||||||||||||||||| ||||| |     
T  618 aaatatgatttattaaacaatccttccaaatttgaatgattttgaataccactaaaaaaaattt-aagtgattaagagttttgattgaataccacaatac 716  T
Q  215 nnnnnnnaaatggcaaaaaatcttaattaaataacacaagacnnnnnnnaaatggtaaagagtcttgattgaataccaca 294  Q
           ||||| |||| |||||| ||| |||||||||||||       |||| ||||||||||||||||||||||||||    
T  717 tttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattgtaaagagtcttgattgaataccaca 796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 116 - 213
Target Start/End: Original strand, 38684 - 38780
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaaga 213  Q
    |||||||||| |||||| ||||||| ||| ||||||||||||||||||||| || ||| |||||||||||||||||||| ||||||||||| |||||||    
T  38684 aaatctgatt-attaaacaatccttcgaaatttgaatgattttgaataccactagact-ttttttaagtgattaagagtcttgattgaataccacaaga 38780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 213
Target Start/End: Original strand, 38974 - 39071
Alignment:
Q  116 aaatctgatttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaataacacaaga 213  Q
    ||||||||||||||||| |||||||  || |||||||||||||||||| || || ||| | |||||||||||||||||| || |||||||| |||||||    
T  38974 aaatctgatttattaaacaatccttccaaatttgaatgattttgaatatcactagact-tcttttaagtgattaagagtctttattgaataccacaaga 39071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 985 - 902
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||||||| ||| ||| |||||||||||||||||||||  | ||| ||||||||||||| || ||| |||||||||||    
T  985 atttattaaataattcttcgaaatttgaatgattttgaataccacaagacttttttttaagtgatgaaaagtcttgattgaata 902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 14003 - 13921
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| |||| |||||| |||||||||||||||||||||  | ||| ||||||||||||| || ||| |||||||||||    
T  14003 atttattaaacaatcttttgaaatttgaatgattttgaataccacaagact-ttttttaagtgatgaaaagtcttgattgaata 13921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 21324 - 21406
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaataccattaaactcttttttaagtgattaagagttttgattgaata 205  Q
    |||||||||| |||| |||||| |||||||||||||||||||||  | ||| ||||||||||||| || ||| |||||||||||    
T  21324 atttattaaacaatcttttgaaatttgaatgattttgaataccacaagact-ttttttaagtgatgaaaagtcttgattgaata 21406  T

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Target: scaffold0543 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 165
Target Start/End: Complemental strand, 10681 - 10638
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaatacca 165  Q
    |||||||||| ||||||||||| |||||||||||||||||||||    
T  10681 atttattaaacaatcctttgaaatttgaatgattttgaatacca 10638  T

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Target: scaffold0110 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 165
Target Start/End: Original strand, 39703 - 39746
Alignment:
Q  123 atttattaaataatcctttgaa-tttgaatgattttgaatacca 165  Q
    |||||||||||||||||| ||| |||||||||||||||||||||    
T  39703 atttattaaataatccttcgaagtttgaatgattttgaatacca 39746  T

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