View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20985_low_50 (Length: 239)
Name: NF20985_low_50
Description: NF20985
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20985_low_50 |
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Alignment Details
Target: chr2 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 13137880 - 13138104
Alignment:
| Q |
1 |
cagatgtgatatctgcatcgtcgttgcttaatccaaaatatatactctcaacaccattgttgtcgtgtctcgcttccagttgaaaacaacaaccatgctc |
100 |
Q |
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| T |
13137880 |
cagatgtgatatctgcatcgtcgtcccttaatccaaaatatatactctcaacaccattgttgtcgtgtctcgcttccagttgaaaacaacaaccatgctc |
13137979 |
T |
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| Q |
101 |
taatttcttacctactttgtaacgtacaccccaagtttctgtttggtcgtctttccaattgctcatggaaacctcaagggagtttacccatagtgccctg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13137980 |
taatttcttacctactttgtaacgtacaccccaagtttctgtttggtcgtctttccaattgctcatggaaacctcaagggagtttacccatagtgccctg |
13138079 |
T |
|
| Q |
201 |
gtaccggtgggagccgatttaaaac |
225 |
Q |
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|||||||||||||||||| |||||| |
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| T |
13138080 |
gtaccggtgggagccgatataaaac |
13138104 |
T |
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