View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20987_high_7 (Length: 246)
Name: NF20987_high_7
Description: NF20987
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20987_high_7 |
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Alignment Details
Target: chr2 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 1670498 - 1670729
Alignment:
| Q |
1 |
tacctaggtgactctcttaaccatttccaataactagccttgaggttttcgttgcatggttgcattctatttatttctatccatcatacatcatctgctc |
100 |
Q |
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| T |
1670498 |
tacctaggtgactctcttaaccatttccaataactagccttgaggttttcgttgcatggttgcattctatttatttctatccatcatacatcatctgctc |
1670597 |
T |
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| Q |
101 |
gtgcttggtgtcatttatctattgcaagtgttagctgttttacaagtttgttggagagttttgatatattgctatttgtatacttacttacatatatatt |
200 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
1670598 |
gtgcttggtgtcatttatctattgcaagtgttaactgttttacaagtttgttggagagttttgatatattgctatttgta----tacttacatatatatt |
1670693 |
T |
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| Q |
201 |
tggtctttttccttaccttgcacatattcatgcatt |
236 |
Q |
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|||||||||||| ||||||||||||||||||||||| |
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| T |
1670694 |
tggtctttttccctaccttgcacatattcatgcatt |
1670729 |
T |
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