View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20987_low_9 (Length: 242)
Name: NF20987_low_9
Description: NF20987
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20987_low_9 |
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Alignment Details
Target: chr1 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 33 - 227
Target Start/End: Complemental strand, 50530527 - 50530333
Alignment:
| Q |
33 |
ggttataaaagctgtctttcaaacccatccataacgcacatcatcacacacagaaaaacaaaaccaaagagcgcacgcaatgacaagccatggctcatcg |
132 |
Q |
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| T |
50530527 |
ggttataaaagctgtctttcaaacccatccataacgcacatcatcacacacagaaaaacaaaaccaaagagcgcacgcaatgacaagccatggctcatcg |
50530428 |
T |
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| Q |
133 |
ttttcgagcctcccaaactatctccaagccgtcgctaaaactccctctcgctttgctcgtcgcggcttctccgtctccacttcttacgaagaaat |
227 |
Q |
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| T |
50530427 |
ttttcgagcctcccaaactatctccaagccgtcgctaaaactccctctcgctttgctcgtcgcggcttctccgtctccacttcttacgaagaaat |
50530333 |
T |
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