View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20988_low_4 (Length: 409)

Name: NF20988_low_4
Description: NF20988
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20988_low_4
NF20988_low_4
[»] chr3 (79 HSPs)
chr3 (1-237)||(43401635-43401887)
chr3 (1-237)||(49199303-49199555)
chr3 (1-169)||(43403662-43403830)
chr3 (1-169)||(40913375-40913542)
chr3 (1-287)||(46860556-46860857)
chr3 (1-260)||(41819340-41819608)
chr3 (1-169)||(55301894-55302058)
chr3 (1-169)||(6095522-6095685)
chr3 (1-169)||(30236207-30236371)
chr3 (1-91)||(7762347-7762437)
chr3 (5-99)||(9636114-9636208)
chr3 (1-176)||(4570034-4570207)
chr3 (1-169)||(46173439-46173604)
chr3 (1-168)||(54593786-54593951)
chr3 (4-91)||(9581367-9581454)
chr3 (5-99)||(801178-801272)
chr3 (1-91)||(19683885-19683975)
chr3 (1-91)||(34491294-34491383)
chr3 (1-91)||(45095245-45095335)
chr3 (1-169)||(47304333-47304503)
chr3 (1-91)||(7764546-7764636)
chr3 (5-99)||(7779992-7780086)
chr3 (1-91)||(37408540-37408630)
chr3 (5-91)||(23197935-23198021)
chr3 (5-91)||(23200134-23200220)
chr3 (1-267)||(36018935-36019208)
chr3 (1-91)||(5258140-5258230)
chr3 (1-91)||(16499111-16499200)
chr3 (5-98)||(45283071-45283165)
chr3 (19-100)||(3617550-3617631)
chr3 (5-94)||(6716585-6716674)
chr3 (5-94)||(54635210-54635299)
chr3 (1-91)||(5260319-5260409)
chr3 (1-91)||(29196383-29196472)
chr3 (1-91)||(29810950-29811039)
chr3 (1-91)||(29813145-29813234)
chr3 (1-91)||(40735465-40735554)
chr3 (1-91)||(44331627-44331716)
chr3 (1-91)||(51398896-51398985)
chr3 (2-91)||(9666463-9666551)
chr3 (19-94)||(25637527-25637602)
chr3 (1-80)||(32891186-32891264)
chr3 (4-91)||(40734583-40734669)
chr3 (216-287)||(46173665-46173738)
chr3 (19-100)||(4598510-4598591)
chr3 (19-100)||(10056319-10056400)
chr3 (19-100)||(10058541-10058622)
chr3 (19-100)||(10060763-10060844)
chr3 (19-100)||(10062985-10063066)
chr3 (19-100)||(10065207-10065288)
chr3 (19-100)||(10211495-10211576)
chr3 (4-63)||(760932-760991)
chr3 (10-159)||(20937748-20937893)
chr3 (4-91)||(29682444-29682530)
chr3 (19-100)||(4600731-4600812)
chr3 (19-100)||(10209275-10209356)
chr3 (4-80)||(22835010-22835085)
chr3 (110-161)||(5270559-5270610)
chr3 (4-91)||(32744433-32744519)
chr3 (4-91)||(39153358-39153444)
chr3 (5-80)||(53921511-53921585)
chr3 (175-249)||(5433774-5433843)
chr3 (1-91)||(44700476-44700564)
chr3 (174-237)||(6095438-6095501)
chr3 (4-91)||(23391906-23391992)
chr3 (20-63)||(27305734-27305777)
chr3 (71-169)||(31340144-31340240)
chr3 (5-91)||(31314531-31314616)
chr3 (175-237)||(43403578-43403640)
chr3 (48-100)||(10067435-10067487)
chr3 (25-64)||(5433905-5433944)
chr3 (53-134)||(26323027-26323105)
chr3 (10-69)||(33191922-33191980)
chr3 (179-234)||(54593978-54594033)
chr3 (1-63)||(5236481-5236542)
chr3 (111-159)||(1683661-1683710)
chr3 (18-63)||(2075099-2075144)
chr3 (1-82)||(4055769-4055850)
chr3 (176-288)||(20937927-20938033)
[»] chr4 (82 HSPs)
chr4 (1-169)||(2209796-2209964)
chr4 (1-175)||(50262613-50262787)
chr4 (4-288)||(379465-379764)
chr4 (1-288)||(12073474-12073774)
chr4 (4-285)||(41964501-41964794)
chr4 (1-287)||(8665490-8665787)
chr4 (1-162)||(46703583-46703740)
chr4 (1-169)||(12119621-12119790)
chr4 (1-287)||(35662523-35662816)
chr4 (1-176)||(8648221-8648391)
chr4 (1-287)||(26364318-26364616)
chr4 (1-169)||(6656038-6656201)
chr4 (1-176)||(50673762-50673933)
chr4 (1-167)||(54883102-54883265)
chr4 (5-176)||(41639512-41639678)
chr4 (1-169)||(27416888-27417051)
chr4 (1-169)||(40632527-40632690)
chr4 (1-91)||(56178633-56178723)
chr4 (5-99)||(31495304-31495398)
chr4 (5-87)||(29999806-29999888)
chr4 (203-288)||(54881595-54881680)
chr4 (10-287)||(33089970-33090243)
chr4 (1-169)||(26699364-26699529)
chr4 (1-91)||(5370079-5370169)
chr4 (9-91)||(48143133-48143215)
chr4 (6-91)||(13992289-13992374)
chr4 (5-100)||(8393479-8393575)
chr4 (5-100)||(8395688-8395784)
chr4 (22-169)||(33989948-33990091)
chr4 (1-89)||(52095361-52095448)
chr4 (1-91)||(26175633-26175722)
chr4 (88-287)||(55085235-55085442)
chr4 (117-271)||(46703742-46703912)
chr4 (1-91)||(9927455-9927544)
chr4 (1-91)||(12743922-12744011)
chr4 (1-91)||(12745311-12745400)
chr4 (1-91)||(48893635-48893724)
chr4 (1-100)||(36463378-36463475)
chr4 (5-91)||(5429765-5429850)
chr4 (1-87)||(6542180-6542265)
chr4 (174-287)||(8648410-8648526)
chr4 (5-91)||(12739547-12739632)
chr4 (1-87)||(31474233-31474318)
chr4 (1-91)||(34570411-34570500)
chr4 (5-91)||(47038408-47038493)
chr4 (19-100)||(5136165-5136246)
chr4 (19-100)||(5138390-5138471)
chr4 (1-89)||(37740707-37740794)
chr4 (55-160)||(3786097-3786199)
chr4 (1-91)||(29254576-29254665)
chr4 (5-91)||(45687179-45687264)
chr4 (1-91)||(46147388-46147477)
chr4 (19-100)||(7125002-7125083)
chr4 (4-89)||(36994609-36994693)
chr4 (4-91)||(5871905-5871991)
chr4 (4-63)||(13009468-13009527)
chr4 (3-49)||(3913532-3913578)
chr4 (5-63)||(5207866-5207924)
chr4 (1-47)||(12744087-12744133)
chr4 (1-47)||(12745476-12745522)
chr4 (1-63)||(37229745-37229807)
chr4 (43-138)||(38811143-38811235)
chr4 (234-287)||(27416791-27416844)
chr4 (1-49)||(4588041-4588089)
chr4 (19-91)||(52467351-52467422)
chr4 (175-237)||(2209986-2210048)
chr4 (1-63)||(54199930-54199992)
chr4 (19-100)||(7122783-7122864)
chr4 (5-49)||(12747794-12747838)
chr4 (1-45)||(24969194-24969238)
chr4 (174-237)||(50262534-50262597)
chr4 (174-237)||(50673686-50673749)
chr4 (109-159)||(32091627-32091677)
chr4 (1-87)||(51337146-51337231)
chr4 (22-99)||(5396700-5396775)
chr4 (117-154)||(6199805-6199842)
chr4 (216-253)||(12119856-12119893)
chr4 (22-91)||(16623322-16623389)
chr4 (10-87)||(21703836-21703912)
chr4 (110-143)||(34113001-34113034)
chr4 (174-234)||(40632711-40632772)
chr4 (203-259)||(41961690-41961746)
[»] chr1 (74 HSPs)
chr1 (1-169)||(42297894-42298061)
chr1 (1-169)||(37032991-37033158)
chr1 (1-290)||(37168380-37168681)
chr1 (1-288)||(28242387-28242689)
chr1 (1-169)||(47255259-47255426)
chr1 (1-169)||(13548923-13549086)
chr1 (3-169)||(29136331-29136493)
chr1 (1-161)||(13547020-13547175)
chr1 (1-260)||(47115254-47115525)
chr1 (1-287)||(31925498-31925793)
chr1 (1-271)||(7482030-7482316)
chr1 (1-237)||(11348780-11349030)
chr1 (1-169)||(37876689-37876852)
chr1 (4-91)||(8550783-8550870)
chr1 (12-143)||(2926602-2926730)
chr1 (1-167)||(19754577-19754737)
chr1 (5-91)||(3189416-3189502)
chr1 (5-91)||(3198233-3198319)
chr1 (5-91)||(3207072-3207158)
chr1 (5-99)||(9987287-9987381)
chr1 (1-91)||(13316348-13316438)
chr1 (5-99)||(20622225-20622319)
chr1 (5-99)||(40282463-40282557)
chr1 (5-91)||(51765483-51765569)
chr1 (5-99)||(9036502-9036596)
chr1 (1-91)||(13659333-13659422)
chr1 (1-91)||(20762754-20762844)
chr1 (5-99)||(21054044-21054138)
chr1 (1-91)||(28220223-28220312)
chr1 (19-100)||(44203732-44203813)
chr1 (1-100)||(193693-193790)
chr1 (4-91)||(834164-834250)
chr1 (1-176)||(34603659-34603815)
chr1 (1-91)||(3156947-3157036)
chr1 (1-91)||(28223418-28223507)
chr1 (1-91)||(28265551-28265640)
chr1 (1-91)||(45644351-45644440)
chr1 (1-91)||(46065000-46065089)
chr1 (1-169)||(19752768-19752928)
chr1 (4-91)||(4552634-4552720)
chr1 (1-63)||(1833604-1833666)
chr1 (1-91)||(31659320-31659409)
chr1 (5-91)||(44455246-44455331)
chr1 (1-91)||(49918432-49918521)
chr1 (216-288)||(31929344-31929418)
chr1 (1-91)||(13137973-13138062)
chr1 (1-55)||(37503589-37503643)
chr1 (1-91)||(50167172-50167261)
chr1 (43-162)||(12318452-12318568)
chr1 (4-91)||(196904-196991)
chr1 (1-162)||(6808534-6808692)
chr1 (4-91)||(3847118-3847204)
chr1 (1-63)||(15820389-15820451)
chr1 (1-63)||(23555290-23555351)
chr1 (5-63)||(36683766-36683824)
chr1 (1-99)||(41360996-41361093)
chr1 (1-91)||(50169207-50169296)
chr1 (1-64)||(22079398-22079462)
chr1 (1-48)||(16455703-16455750)
chr1 (1-91)||(37559864-37559954)
chr1 (180-258)||(34603836-34603914)
chr1 (10-91)||(10925317-10925397)
chr1 (203-288)||(41136106-41136190)
chr1 (72-162)||(49893536-49893623)
chr1 (10-69)||(5459997-5460056)
chr1 (113-154)||(9109355-9109397)
chr1 (1-47)||(30476486-30476532)
chr1 (19-60)||(8871089-8871130)
chr1 (176-237)||(29136516-29136577)
chr1 (177-237)||(37876604-37876665)
chr1 (109-162)||(41136005-41136057)
chr1 (203-287)||(12318316-12318399)
chr1 (1-82)||(13938219-13938300)
chr1 (110-146)||(25652272-25652308)
[»] chr6 (49 HSPs)
chr6 (1-167)||(3808628-3808794)
chr6 (1-287)||(26800670-26800969)
chr6 (1-176)||(5043709-5043880)
chr6 (1-169)||(603007-603174)
chr6 (1-169)||(21589013-21589176)
chr6 (1-159)||(22424758-22424911)
chr6 (1-288)||(2972720-2973025)
chr6 (1-169)||(17758105-17758270)
chr6 (1-99)||(2171520-2171618)
chr6 (1-91)||(5406196-5406286)
chr6 (1-91)||(5410521-5410611)
chr6 (5-169)||(17763076-17763237)
chr6 (1-169)||(26830043-26830209)
chr6 (5-99)||(3072747-3072841)
chr6 (1-103)||(21593746-21593846)
chr6 (1-91)||(31404671-31404761)
chr6 (5-94)||(6097444-6097533)
chr6 (1-91)||(5409066-5409155)
chr6 (1-91)||(5413391-5413480)
chr6 (1-91)||(16452325-16452415)
chr6 (5-94)||(412188-412277)
chr6 (110-293)||(25073762-25073943)
chr6 (1-91)||(30834532-30834622)
chr6 (4-91)||(16569107-16569193)
chr6 (1-91)||(9183028-9183117)
chr6 (1-91)||(33160348-33160438)
chr6 (19-100)||(25421406-25421487)
chr6 (5-98)||(27647946-27648039)
chr6 (5-94)||(16578511-16578601)
chr6 (5-94)||(16616779-16616869)
chr6 (5-94)||(16653197-16653287)
chr6 (1-91)||(26954283-26954372)
chr6 (1-91)||(33211182-33211271)
chr6 (19-100)||(6027347-6027428)
chr6 (19-100)||(34167180-34167261)
chr6 (3-63)||(28137432-28137492)
chr6 (5-94)||(16554954-16555044)
chr6 (5-94)||(16631510-16631600)
chr6 (19-100)||(13154015-13154096)
chr6 (19-100)||(33342092-33342173)
chr6 (19-100)||(34164958-34165039)
chr6 (1-63)||(3038927-3038989)
chr6 (17-169)||(9572689-9572838)
chr6 (174-237)||(5043895-5043958)
chr6 (174-237)||(26829959-26830022)
chr6 (175-237)||(17758292-17758354)
chr6 (175-237)||(17763259-17763321)
chr6 (175-237)||(22424662-22424724)
chr6 (22-99)||(21356029-21356104)
[»] chr7 (76 HSPs)
chr7 (1-288)||(2390364-2390668)
chr7 (1-287)||(8359104-8359402)
chr7 (1-253)||(3259077-3259340)
chr7 (5-169)||(34310637-34310798)
chr7 (1-271)||(29608819-29609094)
chr7 (1-167)||(32357979-32358140)
chr7 (1-169)||(4508629-4508792)
chr7 (1-99)||(35853996-35854094)
chr7 (1-176)||(48599250-48599420)
chr7 (2-91)||(23555123-23555212)
chr7 (16-169)||(22328312-22328461)
chr7 (1-99)||(22270055-22270151)
chr7 (1-99)||(25766948-25767046)
chr7 (1-91)||(29991135-29991225)
chr7 (5-91)||(39731455-39731541)
chr7 (1-174)||(4510466-4510634)
chr7 (1-174)||(4512308-4512476)
chr7 (1-91)||(19502260-19502350)
chr7 (5-91)||(25615939-25616025)
chr7 (5-99)||(43504142-43504236)
chr7 (16-99)||(48408901-48408984)
chr7 (1-169)||(6359872-6360038)
chr7 (5-99)||(24789927-24790021)
chr7 (1-169)||(2360899-2361058)
chr7 (19-100)||(18388747-18388828)
chr7 (19-100)||(18392183-18392264)
chr7 (216-288)||(22328182-22328254)
chr7 (5-99)||(1560654-1560749)
chr7 (4-91)||(41317431-41317517)
chr7 (1-83)||(6432053-6432134)
chr7 (1-91)||(14069830-14069919)
chr7 (1-91)||(14379858-14379947)
chr7 (5-94)||(20343982-20344071)
chr7 (1-91)||(27347899-27347988)
chr7 (19-100)||(6592327-6592408)
chr7 (19-100)||(6594545-6594626)
chr7 (19-100)||(32060309-32060390)
chr7 (4-91)||(41649008-41649094)
chr7 (1-91)||(8153424-8153513)
chr7 (1-91)||(30024729-30024818)
chr7 (1-91)||(31732966-31733055)
chr7 (10-87)||(18396409-18396486)
chr7 (1-91)||(4178856-4178945)
chr7 (1-91)||(18126726-18126815)
chr7 (1-63)||(23565085-23565147)
chr7 (1-63)||(24525526-24525588)
chr7 (1-91)||(36146405-36146494)
chr7 (1-91)||(48489513-48489602)
chr7 (1-63)||(48491661-48491723)
chr7 (1-90)||(2759195-2759283)
chr7 (1-49)||(4586243-4586291)
chr7 (1-80)||(31518984-31519063)
chr7 (1-89)||(43864326-43864413)
chr7 (1-49)||(47673981-47674029)
chr7 (4-91)||(38671219-38671305)
chr7 (1-63)||(496007-496069)
chr7 (1-63)||(1113739-1113801)
chr7 (1-99)||(26417398-26417494)
chr7 (5-87)||(31105394-31105475)
chr7 (1-91)||(47676133-47676222)
chr7 (16-89)||(30814533-30814605)
chr7 (174-237)||(34310552-34310616)
chr7 (109-162)||(1360102-1360155)
chr7 (19-80)||(26639425-26639486)
chr7 (216-273)||(48599139-48599196)
chr7 (1-80)||(3904624-3904703)
chr7 (174-237)||(4510386-4510450)
chr7 (174-237)||(4512228-4512292)
chr7 (23-91)||(12097864-12097931)
chr7 (114-162)||(14301390-14301437)
chr7 (114-154)||(43363406-43363446)
chr7 (10-63)||(4253552-4253605)
chr7 (1-49)||(5116686-5116735)
chr7 (3-63)||(23344059-23344117)
chr7 (255-287)||(6359741-6359773)
chr7 (205-237)||(22552453-22552485)
[»] chr8 (62 HSPs)
chr8 (3-290)||(3772276-3772574)
chr8 (1-288)||(40221827-40222103)
chr8 (1-288)||(40328862-40329159)
chr8 (110-207)||(2999687-2999784)
chr8 (1-169)||(4283606-4283769)
chr8 (1-169)||(11384067-11384230)
chr8 (1-176)||(42434906-42435077)
chr8 (1-169)||(10930120-10930285)
chr8 (1-169)||(18655482-18655648)
chr8 (3-91)||(42498278-42498366)
chr8 (1-91)||(34256503-34256593)
chr8 (7-99)||(2627824-2627916)
chr8 (1-91)||(17982735-17982825)
chr8 (1-91)||(19945355-19945445)
chr8 (1-91)||(34254327-34254417)
chr8 (1-91)||(31218339-31218429)
chr8 (1-91)||(33352232-33352321)
chr8 (1-91)||(43036505-43036594)
chr8 (1-91)||(44303937-44304027)
chr8 (1-90)||(1746216-1746304)
chr8 (5-94)||(3439589-3439678)
chr8 (5-94)||(25690040-25690129)
chr8 (1-91)||(3303667-3303756)
chr8 (1-87)||(4733788-4733873)
chr8 (5-91)||(4743211-4743296)
chr8 (1-91)||(5689353-5689442)
chr8 (1-91)||(15212868-15212957)
chr8 (1-91)||(12702631-12702720)
chr8 (1-91)||(27811360-27811449)
chr8 (1-91)||(30143422-30143511)
chr8 (1-91)||(40321162-40321251)
chr8 (19-100)||(42575311-42575392)
chr8 (1-80)||(7597696-7597776)
chr8 (1-91)||(4731740-4731829)
chr8 (5-91)||(6599058-6599143)
chr8 (5-91)||(6674511-6674596)
chr8 (19-100)||(15290624-15290705)
chr8 (19-100)||(15470993-15471074)
chr8 (1-81)||(1292471-1292549)
chr8 (221-288)||(10240423-10240489)
chr8 (1-63)||(1345395-1345457)
chr8 (1-87)||(8965692-8965777)
chr8 (1-99)||(19491688-19491785)
chr8 (10-72)||(32902188-32902250)
chr8 (1-90)||(9765827-9765914)
chr8 (110-159)||(11137213-11137262)
chr8 (4-49)||(30291692-30291737)
chr8 (3-63)||(8153842-8153902)
chr8 (115-159)||(9633546-9633590)
chr8 (4-63)||(18141905-18141964)
chr8 (174-237)||(18655669-18655732)
chr8 (4-91)||(41366612-41366697)
chr8 (1-63)||(3073898-3073959)
chr8 (1-63)||(4162579-4162640)
chr8 (16-82)||(10015177-10015241)
chr8 (2-38)||(10929871-10929907)
chr8 (1-49)||(44353875-44353923)
chr8 (225-284)||(15691105-15691163)
chr8 (16-87)||(29796320-29796391)
chr8 (16-69)||(11712018-11712071)
chr8 (5-82)||(18106087-18106161)
chr8 (10-78)||(38863949-38864017)
[»] scaffold0236 (1 HSPs)
scaffold0236 (1-288)||(10571-10870)
[»] chr2 (50 HSPs)
chr2 (10-287)||(33648263-33648548)
chr2 (1-176)||(35446800-35446970)
chr2 (1-169)||(24398139-24398307)
chr2 (1-169)||(45727011-45727172)
chr2 (1-288)||(7451200-7451501)
chr2 (16-169)||(17450675-17450822)
chr2 (1-91)||(36988072-36988162)
chr2 (1-91)||(2334414-2334504)
chr2 (1-91)||(5723252-5723342)
chr2 (5-99)||(6266777-6266871)
chr2 (1-91)||(6595002-6595092)
chr2 (1-175)||(1631651-1631818)
chr2 (3-169)||(42288033-42288194)
chr2 (5-91)||(4484326-4484412)
chr2 (1-91)||(4503129-4503218)
chr2 (5-91)||(30833432-30833518)
chr2 (1-91)||(45099837-45099926)
chr2 (5-94)||(32289650-32289739)
chr2 (1-91)||(17057366-17057455)
chr2 (1-91)||(17085349-17085438)
chr2 (19-100)||(12647373-12647454)
chr2 (4-91)||(723741-723827)
chr2 (5-94)||(13656025-13656115)
chr2 (5-91)||(34139767-34139852)
chr2 (1-91)||(36318006-36318095)
chr2 (1-154)||(30217982-30218131)
chr2 (176-288)||(24398349-24398457)
chr2 (1-91)||(36205661-36205750)
chr2 (1-91)||(36773644-36773733)
chr2 (1-91)||(38312322-38312411)
chr2 (16-91)||(39284933-39285007)
chr2 (5-91)||(14633822-14633907)
chr2 (10-76)||(28672022-28672088)
chr2 (1-91)||(29867951-29868040)
chr2 (2-63)||(17490172-17490233)
chr2 (1-49)||(7815311-7815359)
chr2 (4-91)||(11151588-11151674)
chr2 (4-63)||(42362437-42362496)
chr2 (1-91)||(11067387-11067476)
chr2 (1-91)||(33162447-33162536)
chr2 (174-237)||(45727193-45727257)
chr2 (175-287)||(17450844-17450956)
chr2 (4-49)||(14202450-14202495)
chr2 (18-63)||(42412117-42412161)
chr2 (4-91)||(11690586-11690672)
chr2 (1-63)||(11049636-11049698)
chr2 (5-63)||(26353270-26353328)
chr2 (43-100)||(2838079-2838135)
chr2 (43-99)||(1345590-1345645)
chr2 (1-53)||(13121849-13121901)
[»] chr5 (59 HSPs)
chr5 (1-285)||(27637403-27637698)
chr5 (1-176)||(5058127-5058298)
chr5 (1-169)||(213547-213714)
chr5 (1-169)||(40147343-40147506)
chr5 (1-91)||(37439223-37439313)
chr5 (1-91)||(25412842-25412932)
chr5 (5-94)||(9789217-9789306)
chr5 (5-94)||(16409561-16409650)
chr5 (5-94)||(26170848-26170937)
chr5 (5-94)||(26177968-26178057)
chr5 (1-176)||(27015605-27015774)
chr5 (1-89)||(13239833-13239921)
chr5 (1-91)||(13343143-13343232)
chr5 (1-99)||(28278398-28278494)
chr5 (5-99)||(29751148-29751242)
chr5 (5-94)||(18441641-18441730)
chr5 (1-162)||(316844-317002)
chr5 (5-99)||(10593343-10593438)
chr5 (5-99)||(29720450-29720544)
chr5 (5-99)||(29722610-29722704)
chr5 (5-98)||(22536279-22536372)
chr5 (1-91)||(30182670-30182760)
chr5 (19-100)||(25078221-25078302)
chr5 (19-100)||(25136190-25136271)
chr5 (19-100)||(40380191-40380272)
chr5 (19-100)||(40382402-40382483)
chr5 (19-167)||(16640863-16641008)
chr5 (22-162)||(4160702-4160838)
chr5 (1-87)||(16452162-16452247)
chr5 (1-91)||(32636906-32636995)
chr5 (1-91)||(36074039-36074128)
chr5 (1-91)||(42428427-42428516)
chr5 (1-91)||(533851-533940)
chr5 (1-91)||(13488285-13488374)
chr5 (19-100)||(16544509-16544590)
chr5 (19-100)||(16546731-16546812)
chr5 (1-131)||(33831762-33831886)
chr5 (1-91)||(538107-538196)
chr5 (5-63)||(28750679-28750737)
chr5 (1-159)||(33905956-33906117)
chr5 (1-63)||(42426259-42426321)
chr5 (10-91)||(19806454-19806534)
chr5 (7-91)||(8565943-8566026)
chr5 (3-80)||(30682930-30683008)
chr5 (10-160)||(10700580-10700725)
chr5 (1-61)||(9049368-9049428)
chr5 (1-49)||(39468587-39468635)
chr5 (1-63)||(13695714-13695777)
chr5 (111-146)||(30793320-30793355)
chr5 (4-87)||(31183056-31183138)
chr5 (178-268)||(317038-317123)
chr5 (5-63)||(3075682-3075740)
chr5 (221-287)||(16640737-16640803)
chr5 (174-234)||(213735-213795)
chr5 (1-162)||(10054744-10054903)
chr5 (115-145)||(30803016-30803046)
chr5 (1-59)||(42309963-42310021)
chr5 (1-87)||(42926973-42927058)
chr5 (1-49)||(38747087-38747135)
[»] scaffold0176 (1 HSPs)
scaffold0176 (1-167)||(17927-18089)
[»] scaffold0466 (1 HSPs)
scaffold0466 (1-169)||(7409-7572)
[»] scaffold0286 (1 HSPs)
scaffold0286 (1-99)||(11639-11737)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-89)||(434615-434703)
[»] scaffold0491 (2 HSPs)
scaffold0491 (5-91)||(8731-8817)
scaffold0491 (5-91)||(11157-11243)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-91)||(114684-114774)
[»] scaffold1519 (1 HSPs)
scaffold1519 (16-91)||(1012-1087)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1-91)||(149094-149183)
[»] scaffold0674 (1 HSPs)
scaffold0674 (19-100)||(3713-3794)
[»] scaffold0927 (1 HSPs)
scaffold0927 (183-287)||(3377-3484)
[»] scaffold0565 (1 HSPs)
scaffold0565 (19-100)||(2591-2672)
[»] scaffold0066 (1 HSPs)
scaffold0066 (1-89)||(20414-20501)
[»] scaffold0137 (1 HSPs)
scaffold0137 (19-105)||(6373-6459)
[»] scaffold0219 (1 HSPs)
scaffold0219 (18-76)||(27453-27511)


Alignment Details
Target: chr3 (Bit Score: 155; Significance: 4e-82; HSPs: 79)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 43401887 - 43401635
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  43401887 tctctttgtaagaactcattgatagtggattggagaaattaatctctcctccagagtaggtcatggttggaccgaactgggtgaacaatctcttggtgtt 43401788  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgca--------ctagatt--------attgttgttg 184  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||        |||||||        |||||||||     
T  43401787 gttgtctatttttctctactctctttatcttgtttatcctttggttagattgtgattttgctatgcacttgttttctagattagatctagattgttgtta 43401688  T
Q  185 ttgcttgttgttatttacttttggttattaattgtcattgatacttgctccac 237  Q
    |||||||| ||||||||| ||||||||||  ||| ||||||||||||||||||    
T  43401687 ttgcttgtggttatttacatttggttattggttgccattgatacttgctccac 43401635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 49199555 - 49199303
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  49199555 tctctttgtaagaactcattgatagtggattggagagattaatctctcctccagactaggtcatggttggaccgaactgggtgaacaatctcttggtgtt 49199456  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgca--------ctagatt--------attgttgttg 184  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||        |||||||        |||||||||     
T  49199455 gttgtctatttttctctactctctttatcttgtttatcctttggttagattgtggttttgctatgcacttgttttctagattagatctagattgttgtta 49199356  T
Q  185 ttgcttgttgttatttacttttggttattaattgtcattgatacttgctccac 237  Q
    |||||||| ||||||||| ||||||||||  ||| ||||||||||||||||||    
T  49199355 ttgcttgtggttatttacatttggttattggttgccattgatacttgctccac 49199303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 43403830 - 43403662
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  43403830 tctctttgtaagaactcattgatagtggattggagagattaatctctcctccagagtaggtcatggttggaccgaactgggtgaacaatctcttgatgtt 43403731  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcact 169  Q
    ||||| |||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  43403730 gttgtttatttttctccactctctttatcttgtttatcctttggttagattgtggttttgctatgcact 43403662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 40913375 - 40913542
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| |||| ||||||||||||||||||| ||||||||| ||||| ||||||| | ||| |||||||||||| |||||||||||||||||    
T  40913375 tctctttgtaagaactcatcgatagtggattggagagatcaatctctcccccagattaggtcaag-ttggaccgaactgggtcaacaatctcttggtgtt 40913473  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcact 169  Q
     ||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  40913474 attgtctatttttctctaatctctttatcttgtttatcctttggttagattgtggttttgctatgcact 40913542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 46860556 - 46860857
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    ||||||||||| || |||||||||||||||||||||||| ||||| |||||||||||||||||| |||| |||||| ||| ||||| || | ||||||||    
T  46860556 tctctttgtaataactcattgatagtggattggagagatcaatctttcctccagagtaggtcattgttggaccgaattggatgaac-attttttggtgtt 46860654  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcac--------tagat--------tattgttgttg 184  Q
    ||| ||   |||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||        |||||        |||||||||||    
T  46860655 gttatc---ttttctttactctctttatcttgtttatcctttggttagattgtggttttgctatgcacttggtttatagattaggtctatattgttgttg 46860751  T
Q  185 ttgcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttggaatt---gaccgaattc 281  Q
    ||| |||| ||||||||| ||||||||||  ||| |||||||| ||||||||||||| ||||||||||| ||||||  |||||||||   || |||||||    
T  46860752 ttgtttgtggttatttacatttggttattggttgccattgatatttgctccacgaatctaaatttcattgatgtgatgtttggaatttgagatcgaattc 46860851  T
Q  282 acaaca 287  Q
    ||||||    
T  46860852 acaaca 46860857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 1 - 260
Target Start/End: Complemental strand, 41819608 - 41819340
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| ||||| ||||||||||||||| || |||||||||||||||||||||||| |||| ||| ||||||||||||| | | ||||||||    
T  41819608 tctctttgtaagaactcatt-atagtggattggagacatcaatctctcctccagagtaggtcattgttggaccaaactgggtgaacatt-tattggtgtt 41819511  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcactagattattg-------------ttgttgttg 187  Q
    ||| | |  ||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||| | ||  ||             |||||||||    
T  41819510 gttattt--ttttctctactttctttatcttgtttatcctttggttagattgtggttttgctatgcacttggtttatggactaggtctatattgttgttg 41819413  T
Q  188 cttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgtga 260  Q
     |  |||| |||||||||||||| ||  ||| |||||||||||||||||||||| ||||||||||| ||||||    
T  41819412 ttgcttgtgatttacttttggttgttggttgccattgatacttgctccacgaatctaaatttcattgatgtga 41819340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 55302058 - 55301894
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| |||| |||||||| ||||||| || |||| |||||    
T  55302058 tctctttgtaagaattcattgatagtggattggagagatcaatctctcctccatagtaggtcattgttggaccgaacttggtgaac-atttcttagtgtt 55301960  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcact 169  Q
    ||| ||   |||||| ||||||||||||||||||||| ||||||||  ||||||  |||||||||||||    
T  55301959 gttatc---ttttctttactctctttatcttgtttatcctttggttgaattgtggctttgctatgcact 55301894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 6095685 - 6095522
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||  |||| ||||||||| |||||| || ||||||||||    
T  6095685 tctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtca-agttggaccgaactgtgtgaac-atttcttggtgtt 6095588  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcact 169  Q
    ||| ||   |||||| ||||||||||||||||||||| | |||||| ||||||| ||||||||| ||||    
T  6095587 gttatc---ttttctttactctctttatcttgtttatgccttggttggattgtggttttgctatacact 6095522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 30236207 - 30236371
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||| ||||| |||||||  |||| |||||||| ||| |||||| ||||||||||    
T  30236207 tctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattaggtca-agttggaccgaactaggtcaacaatttcttggtgtt 30236305  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcact 169  Q
    ||| ||   |||||| ||||||||||||||||||||| | |||||| ||||||| ||||| ||||||||    
T  30236306 gttatc---ttttctttactctctttatcttgtttataccttggttggattgtgtttttgttatgcact 30236371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 7762347 - 7762437
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  7762347 tctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 7762437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 9636208 - 9636114
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgt 99  Q
    |||||||||| |||||||||||||||||||||| | ||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||    
T  9636208 tttgtaagaactcattgatagtggattggagagttcaatctctcctccaaagtaggtcaagtttgaaccgaactgggtgaacaatctcttggtgt 9636114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 4570034 - 4570207
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||| | | ||| |||||||||||| |||| | ||||||||||    
T  4570034 tctctttgtaagaactcattgatagtggattggagagatcaatctctactccagagtaggtgaagtttggaccgaactgggtcaacatt-tcttggtgtt 4570132  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttag-attgtgattttgctatgcactagattat 176  Q
    ||| |  |||||  | | ||| ||||||||||||||||| ||| || | |||||| |||||||||||||| ||||||    
T  4570133 gttat--attttcttttgctccctttatcttgtttattccttgctttggattgtggttttgctatgcacttgattat 4570207  T

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Target: chr3; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 46173439 - 46173604
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||  |||| |||||||| | | |||||| ||||||||||    
T  46173439 tctctttgtaagaattcattgatagtggattggagagatcaatctctcccccagattaggtca-agttggaccgaactagatcaacaatttcttggtgtt 46173537  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcact 169  Q
    ||| ||  ||||  | | || |||||||||||||||||  || ||| ||||||| ||||||||||||||    
T  46173538 gttatc--ttttcttttgctttctttatcttgtttatttcttagttggattgtggttttgctatgcact 46173604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 54593786 - 54593951
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||  |||| ||| |||||||||||| || ||||||||||    
T  54593786 tctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtatgtca-agttggaccaaactgggtgaac-atttcttggtgtt 54593883  T
Q  101 gttgtctatttttctcta--ctctctttatcttgtttattctttg-gttagattgtgattttgctatgcac 168  Q
    ||| ||   |||||| ||  ||||||||||||||||||||| |||  || ||||||| |||||||||||||    
T  54593884 gttatc---ttttctttagtctctctttatcttgtttattccttgctttggattgtggttttgctatgcac 54593951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 4 - 91
Target Start/End: Original strand, 9581367 - 9581454
Alignment:
Q  4 ctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  9581367 ctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 9581454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 801178 - 801272
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgt 99  Q
    |||||||||| ||||||||||||||||||||||   ||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||    
T  801178 tttgtaagaactcattgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgt 801272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 19683975 - 19683885
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||| | ||| |||||||||||||||||||||    
T  19683975 tctctttgtaagaactcattgatagtggattggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 19683885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 34491294 - 34491383
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||  |||| |||||||||||||||||||||    
T  34491294 tctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtca-agttggaccgaactgggtgaacaatct 34491383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 45095245 - 45095335
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||| | ||| |||||||||||||||||||||    
T  45095245 tctctttgtaagaactcattgatagtggattggagagatcaatctctcctctagagtaggtcaagtttggaccgaactgggtgaacaatct 45095335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 47304333 - 47304503
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||| ||||||| |||||||||||||||||||||||| ||||||||| | ||| ||||||| | ||| |||||||||||| |||||| | ||||||||    
T  47304333 tctcttcgtaagaactcattgatagtggattggagagatcaatctctccccaagattaggtcaagtttg-accgaactgggtcaacaatttattggtgtt 47304431  T
Q  101 gttgtctatttttctc---tactctctttatcttgtttattctttggttagattgtgattttgctatgcact 169  Q
    ||| ||| || || ||   | || |||||||||||||||||| || ||| ||||||| ||||||||||||||    
T  47304432 gttatcttttcttttcttttgctttctttatcttgtttattccttagttggattgtggttttgctatgcact 47304503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 7764546 - 7764636
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||   ||  |||||||||||||||||||||    
T  7764546 tctctttgtaagaactcattgatagtggattggagagatgaatctctcctccagagtaggtcaaatttagaccgaactgggtgaacaatct 7764636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 7780086 - 7779992
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgt 99  Q
    |||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||| | ||| ||| || ||||||||||||||||||||||    
T  7780086 tttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccaaagtgggtgaacaatctcttggtgt 7779992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 37408540 - 37408630
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||| | ||| | |||||||||||||||||||    
T  37408540 tctctttgtaagaactcattgatagtggattgaagagatcaatctctcctccagagtaggtcaagtttggatcgaactgggtgaacaatct 37408630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 5 - 91
Target Start/End: Complemental strand, 23198021 - 23197935
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||| |||||||||||| ||||||||| | ||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  23198021 tttgtaagaactcattgatagtgaattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 23197935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 5 - 91
Target Start/End: Complemental strand, 23200220 - 23200134
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||| |||||||||||| ||||||||| | ||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  23200220 tttgtaagaactcattgatagtgaattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 23200134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 36018935 - 36019208
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| ||||| |||||||||||||||| | ||||||||| ||||  || ||  | |||| |||||||||| |||||| | | ||||||||    
T  36018935 tctctttgtaagaactcatt-atagtggattggagaggtcaatctctcccccag--tatgt--ttgttggaccgaactggatgaacatttt-ttggtgtt 36019028  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcact--------agatta--------ttgttgttg 184  Q
    ||| ||| ||||   |||||||||||||||||||||| |||||||||||||||| ||||| ||  ||||        ||||||        ||||| |||    
T  36019029 gttatctttttt---ctactctctttatcttgtttatcctttggttagattgtggttttgttaaacacttgttttctagattagatctagattgttattg 36019125  T
Q  185 ttgcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttgg 267  Q
    |||||||| || |||||| |||| |||||  |||| ||||||||||||||||||||| ||||||||||| || |||| |||||    
T  36019126 ttgcttgtggtaatttacatttgattattggttgtgattgatacttgctccacgaatctaaatttcattgatatgaagtttgg 36019208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 5258230 - 5258140
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||| ||||| |||||||||||||||||||||| | ||||||| ||||||||||||||| | ||| |||||||| ||||||||||||    
T  5258230 tctctttggaagaactcattgatagtggattggagagttcaatctcttctccagagtaggtcaagtttggaccgaacttggtgaacaatct 5258140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 16499111 - 16499200
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||| |  |||| |||||||||||| ||||||||    
T  16499111 tctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagagtaggtta-agttggaccgaactgggtcaacaatct 16499200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 5 - 98
Target Start/End: Original strand, 45283071 - 45283165
Alignment:
Q  5 tttgtaagaattcatt-gatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtg 98  Q
    |||||||||| ||||| |||||||||||||||||   ||||||||||||||||||||||| | ||| ||||||||| ||||||||||||||||||    
T  45283071 tttgtaagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgagtgaacaatctcttggtg 45283165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 3617550 - 3617631
Alignment:
Q  19 ttgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||||||||   ||||||||||||||||||||||| | ||| |||||||||||||||||||||||| |||||    
T  3617550 ttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtt 3617631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 6716585 - 6716674
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctctt 94  Q
    |||||||||| || |||||||||||||||||||   || |||||||||||||||||||| | ||| ||||||||||||||||||||||||    
T  6716585 tttgtaagaactctttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctt 6716674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 54635210 - 54635299
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctctt 94  Q
    |||||||||| || |||||||||||||||||||   || |||||||||||||||||||| | ||| ||||||||||||||||||||||||    
T  54635210 tttgtaagaactctttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctt 54635299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 5260409 - 5260319
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||| ||||| |||||||||||||||||||||| | ||||||| ||||| ||||||||| | ||| |||||||| ||||||||||||    
T  5260409 tctctttggaagaactcattgatagtggattggagagttcaatctcttctccaaagtaggtcaagtttggaccgaacttggtgaacaatct 5260319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 29196472 - 29196383
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||| ||| | |||||||  |||| |||||||||||| ||||||||    
T  29196472 tctctttgtaagaactcattgatagtggattggagagatcaatctctcccccaaattaggtca-agttggaccgaactgggtcaacaatct 29196383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 29810950 - 29811039
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||| ||||| |||||||  ||| ||||||| ||||| ||||||||    
T  29810950 tctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattaggtca-agttaaaccgaattgggtcaacaatct 29811039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 29813145 - 29813234
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| ||||| |||||||||||||||||| ||||||||| ||||| | |||||| |||| |||||||||||| ||||||||    
T  29813145 tctctttgtaagaactcatttatagtggattggagagatcaatctctcccccagatttggtcat-gttggaccgaactgggtcaacaatct 29813234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 40735465 - 40735554
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||| ||||| |||||||  |||| |||||||||||| | ||||||    
T  40735465 tctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattaggtca-agttggaccgaactgggtcagcaatct 40735554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 44331627 - 44331716
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| | |||||||||||||||||||||| ||||||||| ||||| |||||||  |||| |||||||||||| ||||||||    
T  44331627 tctctttgtaagaacttattgatagtggattggagagatcaatctctcccccagattaggtca-agttggaccgaactgggtcaacaatct 44331716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 51398896 - 51398985
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||||| ||||| |||||||  |||| |||||||| ||| ||||||||    
T  51398896 tctctttgtaagaactcattgatagtggattggagagatttatctctcccccagattaggtca-agttggaccgaacttggtcaacaatct 51398985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 91
Target Start/End: Complemental strand, 9666551 - 9666463
Alignment:
Q  2 ctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||| ||||| ||||| |  |||| |||||||||||| ||||||||    
T  9666551 ctctttgtaagaattctttgatagtggattggagagattgatctctcccccagattaggt-aaagttggaccgaactgggtcaacaatct 9666463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 25637527 - 25637602
Alignment:
Q  19 ttgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctctt 94  Q
    |||||||||||||||||||   ||||||||||||||||||||||| | ||| |||||||||||||| |||||||||    
T  25637527 ttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctt 25637602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 32891186 - 32891264
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgg 80  Q
    |||||||||||||| || ||||||||||||||||||||| ||||||||| || ||||||||||| |||| ||||||||||    
T  32891186 tctctttgtaagaactcgttgatagtggattggagagataaatctctcccccggagtaggtcat-gttggaccgaactgg 32891264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 4 - 91
Target Start/End: Original strand, 40734583 - 40734669
Alignment:
Q  4 ctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||| ||| | |||||||  |||| |||||||||||| ||||||||    
T  40734583 ctttgtaagaactcattgatagtggattggagagatcaatctctcccccaaattaggtca-agttggaccgaactgggtcaacaatct 40734669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 216 - 287
Target Start/End: Original strand, 46173665 - 46173738
Alignment:
Q  216 ttgtcattgatacttgctccac--gaatttaaatttcattaatgtgaaatttggaattgaccgaattcacaaca 287  Q
    ||| ||||||||||||||||||  |||| ||||||||||| ||||||| |||||||||||||||||||||||||    
T  46173665 ttgccattgatacttgctccacacgaatctaaatttcattgatgtgaagtttggaattgaccgaattcacaaca 46173738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 4598591 - 4598510
Alignment:
Q  19 ttgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||||||||   || |||||||||||||||||||| | ||| |||||||||||||| ||||||||| |||||    
T  4598591 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtt 4598510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 10056319 - 10056400
Alignment:
Q  19 ttgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||||||||   || |||||||||||||||||||| | ||| |||||||||||||| ||||||||| |||||    
T  10056319 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtt 10056400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 10058541 - 10058622
Alignment:
Q  19 ttgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||||||||   || |||||||||||||||||||| | ||| |||||||||||||| ||||||||| |||||    
T  10058541 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtt 10058622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 10060763 - 10060844
Alignment:
Q  19 ttgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||||||||   || |||||||||||||||||||| | ||| |||||||||||||| ||||||||| |||||    
T  10060763 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtt 10060844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 10062985 - 10063066
Alignment:
Q  19 ttgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||||||||   || |||||||||||||||||||| | ||| |||||||||||||| ||||||||| |||||    
T  10062985 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtt 10063066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 10065207 - 10065288
Alignment:
Q  19 ttgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||||||||   || |||||||||||||||||||| | ||| |||||||||||||| ||||||||| |||||    
T  10065207 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtt 10065288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 10211495 - 10211576
Alignment:
Q  19 ttgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||||||||   || |||||||||||||||||||| | ||| |||||||||||||| ||||||||| |||||    
T  10211495 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtt 10211576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 760932 - 760991
Alignment:
Q  4 ctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtca 63  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||| ||||| |||||||    
T  760932 ctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattaggtca 760991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 159
Target Start/End: Original strand, 20937748 - 20937893
Alignment:
Q  10 aagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgttgttgtctat 109  Q
    ||||| ||||||||| | |||||||||||| ||||  ||| ||| |||| ||||| |||| || ||||| ||| ||||||   || |||| ||| |||      
T  20937748 aagaactcattgata-tagattggagagatcaatcgttcccccaaagtatgtcatagttggacagaactaggtaaacaattattttgtgtggttctct-- 20937844  T
Q  110 ttttctctactctctttatcttgtttattctttggttagattgtgatttt 159  Q
     |||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  20937845 -tttctctactctctttatcttgtttattatttggttcgattgtgatttt 20937893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 4 - 91
Target Start/End: Original strand, 29682444 - 29682530
Alignment:
Q  4 ctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||| | ||| ||| |||  |||| |||||||||||| ||||||||    
T  29682444 ctttgtaagaactcattgatagtggattggagagatcaatctctcccctagattagatca-agttggaccgaactgggtcaacaatct 29682530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 4600812 - 4600731
Alignment:
Q  19 ttgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||||||||   || |||||||| ||||||||||| | ||| |||||||||||||| ||||||||| |||||    
T  4600812 ttgatagtggattggagagtacaaactctcctctagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtt 4600731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 10209275 - 10209356
Alignment:
Q  19 ttgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||||||||   || |||||||||||||||||||| | ||| ||| |||||||||| ||||||||| |||||    
T  10209275 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccaaactgggtgaccaatctctttgtgtt 10209356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 22835085 - 22835010
Alignment:
Q  4 ctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgg 80  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||| ||| | |||||||  |||| ||||||||||    
T  22835085 ctttgtaagaactcattgatagtggattggagagatcaatctctccgccatattaggtca-agttggaccgaactgg 22835010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 110 - 161
Target Start/End: Original strand, 5270559 - 5270610
Alignment:
Q  110 ttttctctactctctttatcttgtttattctttggttagattgtgattttgc 161  Q
    |||||||||||||||||||| |||||||||||||||| ||||||| ||||||    
T  5270559 ttttctctactctctttatcatgtttattctttggttcgattgtggttttgc 5270610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 32744519 - 32744433
Alignment:
Q  4 ctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    ||||||||||| || |||||||||||||| |||||| ||||| ||| ||||| |||||||  |||| |||||||||||| ||||||||    
T  32744519 ctttgtaagaactctttgatagtggattgaagagataaatctatcccccagattaggtca-agttggaccgaactgggtcaacaatct 32744433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 39153444 - 39153358
Alignment:
Q  4 ctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||| |||||| |||||||||||||||||||||||  ||||||||| ||||| |||||||  |||| || ||||||||| ||||||||    
T  39153444 ctttataagaactcattgatagtggattggagagaacaatctctcccccagattaggtca-agttggactgaactgggtcaacaatct 39153358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 53921585 - 53921511
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgg 80  Q
    |||||||||| |||||||||||||||||||||||| ||||||||| || |||||| ||| | ||| ||||||||||    
T  53921585 tttgtaagaactcattgatagtggattggagagatcaatctctcccccggagtagatcaagtttg-accgaactgg 53921511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 175 - 249
Target Start/End: Complemental strand, 5433843 - 5433774
Alignment:
Q  175 attgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaattt 249  Q
    |||||||||||||||||| |||||||     ||||||||  |||||||||||||||||||||||||| |||||||    
T  5433843 attgttgttgttgcttgtggttattt-----tggttattggttgtcattgatacttgctccacgaatctaaattt 5433774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 44700564 - 44700476
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| || ||||||||||||||||||||| ||||||||| ||| | |||||||  |||| |||||||| ||| ||||||||    
T  44700564 tctctttgtaagaactctttgatagtggattggagagatcaatctctcc-ccacattaggtca-agttggaccgaactaggtcaacaatct 44700476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 237
Target Start/End: Complemental strand, 6095501 - 6095438
Alignment:
Q  174 tattgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccac 237  Q
    |||||||||| |||||||| ||||||||| |||| |||||  ||| ||||||||||||||||||    
T  6095501 tattgttgttattgcttgtggttatttacatttgattattggttgccattgatacttgctccac 6095438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 23391992 - 23391906
Alignment:
Q  4 ctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    ||||| ||||| || |||||||||||||| |||||| ||||||||| ||| | |||||||  |||| |||||||||||| ||||||||    
T  23391992 ctttgcaagaactctttgatagtggattgtagagataaatctctcccccaaattaggtca-agttggaccgaactgggtcaacaatct 23391906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 27305777 - 27305734
Alignment:
Q  20 tgatagtggattggagagattaatctctcctccagagtaggtca 63  Q
    |||||||||||||||||||| ||||||||||||| |||||||||    
T  27305777 tgatagtggattggagagatcaatctctcctccaaagtaggtca 27305734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 71 - 169
Target Start/End: Complemental strand, 31340240 - 31340144
Alignment:
Q  71 accgaactgggtgaacaatctcttggtgttgttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcact 169  Q
    |||||||||||| |||| | ||||||||||||| ||| || || |   || |||||||||||||||||| || ||| ||||||| ||||||||||||||    
T  31340240 accgaactgggtcaacattttcttggtgttgttatcttttcttttg--ctttctttatcttgtttattccttagttggattgtggttttgctatgcact 31340144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 91
Target Start/End: Original strand, 31314531 - 31314616
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||| || ||||||||||||||||||||| ||| ||||| ||| | |||||||  |||| ||||||||| || ||||||||    
T  31314531 tttgtaagaactctttgatagtggattggagagatcaatatctcccccatattaggtca-agttggaccgaactgagtcaacaatct 31314616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 237
Target Start/End: Complemental strand, 43403640 - 43403578
Alignment:
Q  175 attgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccac 237  Q
    |||||| || |||||||| ||||||||| ||||||||||  ||| ||||||||||||||||||    
T  43403640 attgttattattgcttgtggttatttacatttggttattggttgccattgatacttgctccac 43403578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 10067435 - 10067487
Alignment:
Q  48 cctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||||| | ||| |||||||||||||| ||||||||| |||||    
T  10067435 cctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtt 10067487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 5433944 - 5433905
Alignment:
Q  25 gtggattggagagattaatctctcctccagagtaggtcat 64  Q
    ||||||||||||||| ||||||||||||| ||||||||||    
T  5433944 gtggattggagagatcaatctctcctccatagtaggtcat 5433905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 53 - 134
Target Start/End: Complemental strand, 26323105 - 26323027
Alignment:
Q  53 agagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgttgttgtctatttttctctactctctttatcttgtt 134  Q
    |||||||||||| |||| |||||| ||||| ||||||   |||||||| || |||   ||||||||||||||||||||||||    
T  26323105 agagtaggtcattgttggaccgaagtgggtaaacaattctttggtgttattctct---tttctctactctctttatcttgtt 26323027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 10 - 69
Target Start/End: Original strand, 33191922 - 33191980
Alignment:
Q  10 aagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttg 69  Q
    ||||| |||||||||||||||| ||||||| ||||||| |||||||| ||||||| ||||    
T  33191922 aagaactcattgatagtggattagagagatcaatctct-ctccagaggaggtcattgttg 33191980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 179 - 234
Target Start/End: Original strand, 54593978 - 54594033
Alignment:
Q  179 ttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctc 234  Q
    ||||| |||||||| ||||||||  ||||||||||  |||||||||||||||||||    
T  54593978 ttgttattgcttgtggttatttatatttggttattggttgtcattgatacttgctc 54594033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 5236542 - 5236481
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtca 63  Q
    |||||||||||||| ||||||||| |||||| ||||||| ||||| ||| ||||| |||||||    
T  5236542 tctctttgtaagaactcattgataatggattcgagagatcaatctttcc-ccagattaggtca 5236481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 159
Target Start/End: Original strand, 1683661 - 1683710
Alignment:
Q  111 tttctctactctctttatcttgttta-ttctttggttagattgtgatttt 159  Q
    |||||||||||||||||||||||||| || ||||||| ||||||| ||||    
T  1683661 tttctctactctctttatcttgtttatttttttggttcgattgtggtttt 1683710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 2075144 - 2075099
Alignment:
Q  18 attgatagtggattggagagattaatctctcctccagagtaggtca 63  Q
    |||||||||||||| ||||||| ||||||||| | |||||||||||    
T  2075144 attgatagtggatttgagagatcaatctctccccgagagtaggtca 2075099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 4055850 - 4055769
Alignment:
Q  1 tctctttgtaagaat-tcattgatagtggattggagagattaatctctcctccaga-gtaggtcatggttgaaccgaactgggt 82  Q
    ||||||||||||||  ||||||||||||||||| ||||||   ||||||| ||||| ||||||||| ||||  |||||||||||    
T  4055850 tctctttgtaagaaactcattgatagtggattgaagagat--ctctctcccccagatgtaggtcattgttgggccgaactgggt 4055769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 288
Target Start/End: Original strand, 20937927 - 20938033
Alignment:
Q  176 ttgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttggaattgacc 275  Q
    ||||||||| ||||||| |||||||     || |||||| ||||||||||||||||  |||| ||| ||||||| | | |||||| |||||| | || ||    
T  20937927 ttgttgttgctgcttgtagttattt-----tgcttattagttgtcattgatacttgtcccacaaatctaaattttactgatgtgagatttgg-agtgtcc 20938020  T
Q  276 gaattcacaacaa 288  Q
    |||||||||||||    
T  20938021 gaattcacaacaa 20938033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 149; Significance: 1e-78; HSPs: 82)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 2209796 - 2209964
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  2209796 tctctttgtaagaactcattgatagtggattggagagattaatctctcctccagagtaggtcatggttggaccgaactgggtgaacaatctcttggtgtt 2209895  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcact 169  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||    
T  2209896 gttgtctatttttctctactctctttatcttgtttatcatttggttagattgtggttttgctatgcact 2209964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 50262787 - 50262613
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| ||||||||||| ||||||||| || ||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  50262787 tctctttgtaagaactcattgatagttgattggagatatcaatctttcctccagagtaggtcattgttggaccgaactgggtgaacaatctcttggtgtt 50262688  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcactagatta 175  Q
    |||||||||||||||||||||| |||||||||||||||| ||  || ||||||| |||||| ||||||| |||||    
T  50262687 gttgtctatttttctctactctttttatcttgtttattccttacttggattgtggttttgccatgcacttgatta 50262613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 4 - 288
Target Start/End: Original strand, 379465 - 379764
Alignment:
Q  4 ctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgttgtt 103  Q
    ||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||| ||||| || |||||||||||||    
T  379465 ctttgtaagaactaattgatagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactggatgaac-atttcttggtgttgtt 379563  T
Q  104 gtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcactagat----------------tattgttgttgttg 187  Q
     ||   |||||| ||||||||||||||||||||| |||||||||||||||| ||||| |||||||| | |                ||||||||||||||    
T  379564 atc---ttttctttactctctttatcttgtttatcctttggttagattgtggttttgttatgcacttggtttatagactaggtctatattgttgttgttg 379660  T
Q  188 cttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttggaatt---gaccgaattcaca 284  Q
     |||| ||||||||| |||| |||||  ||| || ||||||||||||||||||| ||||||||||| ||||||  |||||||||   |||||||||||||    
T  379661 tttgtggttatttacatttgattattggttgccactgatacttgctccacgaatctaaatttcattgatgtgaggtttggaatttgagaccgaattcaca 379760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 1 - 288
Target Start/End: Original strand, 12073474 - 12073774
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||| |||| |||||||| ||||||| || ||||||||||    
T  12073474 tctctttgtaagaactcattgatagtggattggagagatcaatctctcttccagagtaggtcattgttggaccgaactaggtgaac-atttcttggtgtt 12073572  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgca--------ctagatt--------attgttgttg 184  Q
    ||| ||   |||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||        |||||||        ||||||||||    
T  12073573 gttatc---ttttctttactctctttatcttgtttattctttggttagattgtggttttgttatgcacttggtttctagattagatctagattgttgttg 12073669  T
Q  185 ttgcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttggaatt---gaccgaattc 281  Q
    |||||||| |||  || |  |||||| || |||| |||||||||||||||||| |||||||||||||||  |||||  |||| ||||   ||||||||||    
T  12073670 ttgcttgtggtttattcc--ttggttgtttattgccattgatacttgctccacaaatttaaatttcattggtgtgaggtttgaaatttgagaccgaattc 12073767  T
Q  282 acaacaa 288  Q
    |||||||    
T  12073768 acaacaa 12073774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 4 - 285
Target Start/End: Original strand, 41964501 - 41964794
Alignment:
Q  4 ctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgttgtt 103  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||  |||| |||||||||||||| | || |||||||||||||    
T  41964501 ctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtca-agttggaccgaactgggtgagc-atttcttggtgttgtt 41964598  T
Q  104 gtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgca--------ctagatt--------attgttgttgttg 187  Q
     ||   |||||| |||||||  |||||||||||| |||||||||||||||| ||||||||||||        |||||||        ||||||||| |||    
T  41964599 atc---ttttctttactctc--tatcttgtttatcctttggttagattgtggttttgctatgcacttgttttctagattagatctagattgttgttattg 41964693  T
Q  188 cttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttggaatt---gaccgaattcaca 284  Q
    ||||| ||||||||| |||| || ||  ||| |||||||||||||||||||||| ||||||||||| ||||||  |||||||||   |||||||||||||    
T  41964694 cttgtggttatttacatttgattgttggttgccattgatacttgctccacgaatctaaatttcattgatgtgaggtttggaatttgagaccgaattcaca 41964793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 8665490 - 8665787
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||  |||| ||| |||| |||| || || ||||||||||    
T  8665490 tctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtca-agttggaccaaactaggtgtac-atttcttggtgtt 8665587  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcactagat-------------tattgttgttgttg 187  Q
    ||| ||   |||||| ||||||||||||||||||||||| |||||| ||||||| |||||||||||| | |||             ||||||||||||||    
T  8665588 gttatc---ttttctttactctctttatcttgtttattccttggttggattgtggttttgctatgcatttgattatagatagactatattgttgttgttg 8665684  T
Q  188 cttgttgttatt---tacttttggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttggaattgaccgaattcaca 284  Q
    ||||| |||| |   |  |||||||| ||  ||| ||||||||||||||| |||||| ||||||||||| | ||||| |||| |||||||||||||||||    
T  8665685 cttgtggttaatcaatttttttggttgttggttgccattgatacttgctcgacgaatctaaatttcattgaagtgaagtttgaaattgaccgaattcaca 8665784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 46703583 - 46703740
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| |||| |||||| ||||||||| || ||||||||||    
T  46703583 tctctttgtaagaactcatttatagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaattgggtgaac-atttcttggtgtt 46703681  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgct 162  Q
    ||| ||   |||||| |||||||||||||||||||||  ||||||||||||||| |||||||    
T  46703682 gttatc---ttttctttactctctttatcttgtttatcatttggttagattgtggttttgct 46703740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 12119621 - 12119790
Alignment:
Q  1 tctctttgtaa-gaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgt 99  Q
    ||||||||||| ||| ||||| |||||||||||||||||| ||||||||| | |||||||||||| |||| |||||||| |||||||||| |||||||||    
T  12119621 tctctttgtaaagaactcatttatagtggattggagagatcaatctctcc-caagagtaggtcattgttggaccgaactaggtgaacaatttcttggtgt 12119719  T
Q  100 tgttgtctatttt-tctctactctctttatcttgtttattctttggttagattgtgattttgctatgcact 169  Q
    |||  |||||||| |||||||||||||||||||||||| ||||||||  ||||||| ||||||||||||||    
T  12119720 tgtcatctattttttctctactctctttatcttgtttagtctttggtccgattgtggttttgctatgcact 12119790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 35662523 - 35662816
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| |||||||||||||||||||||||| ||| ||||||| |||||||||||  |||| |||||||||  ||||| || | ||||||||    
T  35662523 tctctttgtaagaactcattgatagtggattggagagatcaatatctcctcaagagtaggtca-agttggaccgaactgaatgaac-attttttggtgtt 35662620  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcactagat----------------tattgttgttg 184  Q
    ||| ||   |||||| ||||||||||||||||||||||| |||||| ||||||| |||||||||||||| | |                |||||||||||    
T  35662621 gttatc---ttttctttactctctttatcttgtttattccttggttggattgtggttttgctatgcacttggtttatagactatgtctatattgttgttg 35662717  T
Q  185 ttgcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttggaattgaccgaattcaca 284  Q
    |||||| | |    ||| |||||||| ||  ||| |||||||||||||||||| ||| ||||||||||| ||||||| ||||||||||||||||||||||    
T  35662718 ttgcttatgg----ttaattttggttgttggttgccattgatacttgctccacaaatctaaatttcattgatgtgaagtttggaattgaccgaattcaca 35662813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 8648221 - 8648391
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||  |||| ||| |||||||||||| || ||||||||||    
T  8648221 tctctttgtaagaactcattgatattggattggagagatcaatctctcctccagagtaggtca-agttggaccaaactgggtgaac-atttcttggtgtt 8648318  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcactagattat 176  Q
    ||| ||   |||||| ||||||||||||||||||||||| |||||| ||||||| |||||||||||| | ||||||    
T  8648319 gttatc---ttttctttactctctttatcttgtttattccttggttggattgtggttttgctatgcatttgattat 8648391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 26364318 - 26364616
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| ||||| |||||||||||||||||| ||||||||| ||||| ||||||| | ||| || ||||||||| |||||| ||||||||||    
T  26364318 tctctttgtaagaactcattaatagtggattggagagatcaatctctcccccagattaggtcaagtttg-actgaactgggtcaacaatttcttggtgtt 26364416  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcactagat-----------------tattgttgtt 183  Q
    ||| ||   |||||| ||||||||||||||||||||||| ||| || ||||||| ||||||||| ||||  ||                 ||||||||||    
T  26364417 gttatc---ttttctttactctctttatcttgtttattccttgcttggattgtggttttgctatacacttaattatagactaggtctatatattgttgtt 26364513  T
Q  184 gttgcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttggaattgaccgaattcac 283  Q
    ||||||||| ||||   | ||||  || || ||||||||||||||||||||||||||| ||||||||||| |||| || ||||||||||||||| |||||    
T  26364514 gttgcttgtagtta-acattttttattgttgattgtcattgatacttgctccacgaatctaaatttcattgatgtaaagtttggaattgaccgagttcac 26364612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 6656038 - 6656201
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||  |||| |||||| ||||||||| || ||||||||||    
T  6656038 tctctttgtaagaactcattgatagtggattggagagatcaatctctcatccagagtaggtca-agttggaccgaattgggtgaac-atttcttggtgtt 6656135  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcact 169  Q
    ||| ||   |||||| ||||||||||||||||||||| |||| ||| ||||||| ||||||||||||||    
T  6656136 gttatc---ttttctttactctctttatcttgtttatccttttgttggattgtggttttgctatgcact 6656201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 50673933 - 50673762
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||  |||| |||||||| ||||||| || ||||||||||    
T  50673933 tctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtca-agttggaccgaactaggtgaac-atttcttggtgtt 50673836  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttg-gttagattgtgattttgctatgcactagattat 176  Q
    ||| ||   |||||| ||||||||||||||||||||||| |||  || ||||||| |||||||||||||| ||||||    
T  50673835 gttatc---ttttctttactctctttatcttgtttattccttgctttggattgtggttttgctatgcacttgattat 50673762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 54883102 - 54883265
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| |||||||||||||||||||| ||| ||||||||||||||| || ||||  |||| |||||||||||| |||||| ||||||||||    
T  54883102 tctctttgtaagaactcattgatagtggattggagggatcaatctctcctccagattaagtca-agttggaccgaactgggtcaacaatttcttggtgtt 54883200  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgca 167  Q
    ||| ||  ||||||| ||||||||||||||| ||||||||||||||  |||||| ||||||| ||||    
T  54883201 gttatc--tttttctttactctctttatcttatttattctttggttgaattgtggttttgctctgca 54883265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 41639512 - 41639678
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgttgttg 104  Q
    |||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||  |||| ||||||||| |||||| || |||||||||||||     
T  41639512 tttgtaagaactcatcgatagtggattggagagatcaatctctcctccagagtaggtca-agttggaccgaactgagtgaac-atttcttggtgttgtta 41639609  T
Q  105 tctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcactagattat 176  Q
    ||    ||||| ||||||||||||||||||||| ||||||||  |||||| |||||||||||||| ||||||    
T  41639610 tc---gtttctttactctctttatcttgtttatcctttggttgaattgtggttttgctatgcacttgattat 41639678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 27417051 - 27416888
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    ||||||||||| || |||||||||||||||||||||||| ||||||||| ||||| |||||||  |||| ||||||||| || |||||||| ||||||||    
T  27417051 tctctttgtaaaaactcattgatagtggattggagagatcaatctctcccccagattaggtca-agttggaccgaactgagtcaacaatct-ttggtgtt 27416954  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcact 169  Q
    ||| ||   || ||| |||||||||||||||||||||||||||||| ||||||| |||||| |||||||    
T  27416953 gttatc---ttgtctttactctctttatcttgtttattctttggttggattgtggttttgccatgcact 27416888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 40632527 - 40632690
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||| | |||| ||||  |||| |||||||||||| ||| || ||||||||||    
T  40632527 tctctttgtaagaactcattgatagtggattggagagatcaatctctcctctaaagtaagtca-agttggaccgaactgggtaaac-atttcttggtgtt 40632624  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcact 169  Q
    ||| ||| |||||   ||||||||||||||||||||| ||||||||  |||||| |||||| |||||||    
T  40632625 gttatcttttttt---tactctctttatcttgtttatcctttggttgaattgtggttttgccatgcact 40632690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 56178723 - 56178633
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  56178723 tctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 56178633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 31495398 - 31495304
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgt 99  Q
    |||||||||| ||||||||||| |||||||||| | ||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||    
T  31495398 tttgtaagaactcattgatagttgattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgt 31495304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 29999888 - 29999806
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaaca 87  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | ||| |||||||||||||||||    
T  29999888 tttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 29999806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 203 - 288
Target Start/End: Original strand, 54881595 - 54881680
Alignment:
Q  203 ttttggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttggaattgaccgaattcacaacaa 288  Q
    |||||||| ||  |||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||    
T  54881595 ttttggttgttggttgtcattgatacttgctccacgaatataaatttcattgatgtgaagtttggaattgaccgaattcacaacaa 54881680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 10 - 287
Target Start/End: Original strand, 33089970 - 33090243
Alignment:
Q  10 aagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgttgttgtctat 109  Q
    ||||| |||||||||||||||| ||||||| ||||||||||| ||||||||| || |||| |||| ||| | | ||||||   |||  |||||| ||       
T  33089970 aagaactcattgatagtggattagagagatcaatctctcctctagagtaggttattgttggaccggactagataaacaattctttgaagttgttctc--- 33090066  T
Q  110 ttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcactagattat-----tgttgttgttgcttgttgttatttactt 204  Q
    |||||||| |||||||||||||||||||| ||||||| ||||||| ||||||| | |||| |  | |     |||||||||||||  | ||||     ||    
T  33090067 ttttctctgctctctttatcttgtttattttttggttcgattgtggttttgctttacacttggatctagatatgttgttgttgctcttggtta-----tt 33090161  T
Q  205 ttggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttggaattgaccgaattcacaaca 287  Q
    | ||||||| |||||||||||||||| | |||| |||  |||||||||| |||||| ||||||| || |||||||||||||||    
T  33090162 tcggttattgattgtcattgatacttcccccacaaatcaaaatttcattgatgtgagatttggagtt-accgaattcacaaca 33090243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 26699529 - 26699364
Alignment:
Q  1 tctctttgtaa-gaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgt 99  Q
    ||||||||||| ||| ||||| ||| |||||||||||||| |||||||   |||||||||||||| |||| |||||||||||| || ||| |||| |||     
T  26699529 tctctttgtaaagaactcatttataatggattggagagatcaatctctatcccagagtaggtcattgttggaccgaactgggtaaa-aatttcttagtgc 26699431  T
Q  100 tgttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcact 169  Q
     ||| |||   ||||| ||||||||||||||||||||||||||||||  ||| || ||||||||||||||    
T  26699430 cgttatct---tttctttactctctttatcttgtttattctttggttcaattatggttttgctatgcact 26699364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 5370169 - 5370079
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| |||||||||||||| | ||||||| ||||||||||||||||||||||| | ||| ||||||||| |||||||||||    
T  5370169 tctctttgtaagaactcattgatagtggactagagagatcaatctctcctccagagtaggtcaagtttggaccgaactgagtgaacaatct 5370079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 9 - 91
Target Start/End: Original strand, 48143133 - 48143215
Alignment:
Q  9 taagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | ||| ||| |||||||||||||||||    
T  48143133 taagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccaaactgggtgaacaatct 48143215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 13992374 - 13992289
Alignment:
Q  6 ttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    ||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||| | ||| |||||||| ||||||||||||    
T  13992374 ttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactaggtgaacaatct 13992289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 8393479 - 8393575
Alignment:
Q  5 tttgtaagaattcatt-gatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||| ||||| |||||||||||||||||   ||||||||||||||||||||||| | ||| |||||||||||||||||||||||| |||||    
T  8393479 tttgtaagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtt 8393575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 8395688 - 8395784
Alignment:
Q  5 tttgtaagaattcatt-gatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||| ||||| |||||||||||||||||   ||||||||||||||||||||||| | ||| |||||||||||||||||||||||| |||||    
T  8395688 tttgtaagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtt 8395784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 22 - 169
Target Start/End: Original strand, 33989948 - 33990091
Alignment:
Q  22 atagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgttgttgtctatttttctctactc 121  Q
    |||||||||||||||||| ||||||||| ||||||||||||||  ||| |  ||||||||| |||| | |||||||||| || |  |||||| |||||||    
T  33989948 atagtggattggagagatcaatctctccaccagagtaggtcattcttggattgaactgggtaaacatt-tcttggtgttattat--attttt-tctactc 33990043  T
Q  122 tctttatcttgtttattctttggttagattgtgattttgctatgcact 169  Q
    |||||||||||||||||||||||||  ||| ||  |||||||||||||    
T  33990044 tctttatcttgtttattctttggttcaattctggatttgctatgcact 33990091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 52095448 - 52095361
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaat 89  Q
    |||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||| || | ||| |||||||||||||||||||    
T  52095448 tctctttgtaagaaatctttgatagtggattggagagatcaatctctcctccagagtagg-caagtttggaccgaactgggtgaacaat 52095361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 26175722 - 26175633
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||| ||||| |||||||  |||| |||||||||||| ||||||||    
T  26175722 tctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattaggtca-agttggaccgaactgggtcaacaatct 26175633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 88 - 287
Target Start/End: Complemental strand, 55085442 - 55085235
Alignment:
Q  88 atctcttggtgttgttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcactagatt------------- 174  Q
    |||||||||||||||| |||   ||||| ||||||||||||||||||||||| |||||| ||||||| |||||||||||||| | ||                 
T  55085442 atctcttggtgttgttatct---tttctttactctctttatcttgtttattccttggttggattgtggttttgctatgcacttggtttctaaattagatc 55085346  T
Q  175 ---attgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttggaatt 271  Q
       ||||||||| |||||||| |||| ||     || || ||  ||||||||||||||||||||| |||| ||||||||||| ||||||| |||||||||    
T  55085345 tagattgttgttattgcttgtagttaatt-----tgattgttggttgtcattgatacttgctccatgaatctaaatttcattgatgtgaagtttggaatt 55085251  T
Q  272 gaccgaattcacaaca 287  Q
    |||| |||||||||||    
T  55085250 gaccaaattcacaaca 55085235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 117 - 271
Target Start/End: Original strand, 46703742 - 46703912
Alignment:
Q  117 tactctctttatcttgtttattctttggttagattgtgattttgctatgcactagat-----------------tattgttgttgttgcttgttgttatt 199  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||||| |||                 ||||||||||||||||||  ||||||    
T  46703742 tactctctttatcttgtttatcctttggttagattgtggttttgctatgcacttgattatagaataggtctatatattgttgttgttgcttgaggttatt 46703841  T
Q  200 tacttttggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttggaatt 271  Q
    ||| ||||||||||  |||| |||||||||| |||||||||| |||| ||| || ||||||| |||||||||    
T  46703842 tacatttggttattggttgttattgatacttactccacgaatctaaa-ttctttgatgtgaagtttggaatt 46703912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 9927544 - 9927455
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||| ||||| |||||||  |||| ||||||||| || ||||||||    
T  9927544 tctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattaggtca-agttggaccgaactgagtcaacaatct 9927455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 12744011 - 12743922
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||| ||| | |||||||  |||| |||||||||||| ||||||||    
T  12744011 tctctttgtaagaactcattgatagtggattggagagatcaatctctcccccatattaggtca-agttggaccgaactgggtcaacaatct 12743922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 12745400 - 12745311
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||| ||| | |||||||  |||| |||||||||||| ||||||||    
T  12745400 tctctttgtaagaactcattgatagtggattggagagatcaatctctcccccatattaggtca-agttggaccgaactgggtcaacaatct 12745311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 48893724 - 48893635
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| || ||||||||||||||||||||| ||||||||| ||||| |||||||  |||| |||||||||||| ||||||||    
T  48893724 tctctttgtaagaactctttgatagtggattggagagatcaatctctcccccagattaggtca-agttggaccgaactgggtcaacaatct 48893635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 36463475 - 36463378
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| || |||| |||||||||||||||| ||||||||| ||||| |||||||  |||| |||||||||||| |||||||| ||||||||    
T  36463475 tctctttgtaagaactctttgacagtggattggagagatcaatctctcccccagattaggtca-agttggaccgaactgggtcaacaatct-ttggtgtt 36463378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 5 - 91
Target Start/End: Original strand, 5429765 - 5429850
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||| |||||||||||||||||||||||| ||||||||| ||||| ||||| |  |||| |||||||||||| ||||||||    
T  5429765 tttgtaagaactcattgatagtggattggagagatcaatctctcccccagattaggtta-agttggaccgaactgggtcaacaatct 5429850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 6542265 - 6542180
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaaca 87  Q
    |||||||||||||| || ||||||||||||||||||||| ||||||||| |||| ||||||||  |||| |||||||||||| ||||    
T  6542265 tctctttgtaagaactcgttgatagtggattggagagatcaatctctcccccagggtaggtca-agttggaccgaactgggtaaaca 6542180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 174 - 287
Target Start/End: Original strand, 8648410 - 8648526
Alignment:
Q  174 tattgttgttgttgcttgttgttatttactttt---ggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttggaat 270  Q
    ||||||||||||||||||| |||| | | ||||   |||| ||  ||| ||||||||||||||| |||||| ||||||||||| | ||||| |||| |||    
T  8648410 tattgttgttgttgcttgtggttaatcaatttttttggttgttggttgccattgatacttgctcgacgaatctaaatttcattgaagtgaagtttgtaat 8648509  T
Q  271 tgaccgaattcacaaca 287  Q
    |||||||||||||||||    
T  8648510 tgaccgaattcacaaca 8648526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 5 - 91
Target Start/End: Complemental strand, 12739632 - 12739547
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||| ||| |||||||||||||||||||||||| ||||||||| ||||| |||||||  |||| |||||||||||| ||||||||    
T  12739632 tttgtatgaactcattgatagtggattggagagatcaatctctcccccagattaggtca-agttggaccgaactgggtcaacaatct 12739547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 31474233 - 31474318
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaaca 87  Q
    |||||||||||||| ||||||||||| |||||||||||| ||||||||| ||||||||| |||  |||| |||||||||||| ||||    
T  31474233 tctctttgtaagaactcattgatagttgattggagagataaatctctccaccagagtagatca-agttggaccgaactgggtaaaca 31474318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 34570500 - 34570411
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||| ||||| ||||| |  |||| | |||||||||| ||||||||    
T  34570500 tctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattaggtta-agttggatcgaactgggtcaacaatct 34570411  T

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Target: chr4; HSP #45
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 5 - 91
Target Start/End: Complemental strand, 47038493 - 47038408
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||| | |||||||||||||||||||||||| ||||||||| |||||||| ||||  |||| |||||||||||| ||||||||    
T  47038493 tttgtaaggactcattgatagtggattggagagatcaatctctcccccagagtaagtca-agttggaccgaactgggtcaacaatct 47038408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 5136165 - 5136246
Alignment:
Q  19 ttgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||||||||   || |||||||||||||||||||| | ||| |||||||||||||| ||||||||| |||||    
T  5136165 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtt 5136246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 5138390 - 5138471
Alignment:
Q  19 ttgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||||||||   || |||||||||||||||||||| | ||| |||||||||||||| ||||||||| |||||    
T  5138390 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtt 5138471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 37740707 - 37740794
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaat 89  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||| ||||| | |||||  |||| ||||||||| || ||||||    
T  37740707 tctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagatttggtca-agttggaccgaactgtgtcaacaat 37740794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 55 - 160
Target Start/End: Original strand, 3786097 - 3786199
Alignment:
Q  55 agtaggtcatggttgaaccgaactgggtgaacaatctcttggtgttgttgtctatttttctctactctctttatcttgtttattctttggttagattgtg 154  Q
    |||||||||| |||| ||| ||||| || ||||||   ||||||||||| |||   |||||||||||||||||||||||| ||||||||||| ||||||     
T  3786097 agtaggtcattgttgtaccaaactgagttaacaattatttggtgttgttctct---tttctctactctctttatcttgttcattctttggttcgattgta 3786193  T
Q  155 attttg 160  Q
    ||||||    
T  3786194 attttg 3786199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 29254576 - 29254665
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| || ||||||||||||||||||||| ||||||||  ||| | |||||||  |||| |||||||||||| ||||||||    
T  29254576 tctctttgtaagaactcgttgatagtggattggagagatcaatctctctcccaaattaggtca-agttggaccgaactgggtcaacaatct 29254665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 91
Target Start/End: Complemental strand, 45687264 - 45687179
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||| ||||||||||||||||||||||||  |||||||||||| | || ||||  |||| |||||||||||| ||||||||    
T  45687264 tttgtaagaactcattgatagtggattggagagatctatctctcctccatattatgtca-agttggaccgaactgggtcaacaatct 45687179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 46147477 - 46147388
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| || |||||||||||||||||| || ||||||||| ||| | |||||||  |||| |||||||||||| ||||||||    
T  46147477 tctctttgtaagaactctttgatagtggattggagacatcaatctctcccccaaattaggtca-agttggaccgaactgggtcaacaatct 46147388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 7125002 - 7125083
Alignment:
Q  19 ttgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||||||||   ||||||||||||||||||||||| |     |||||||||||||||||||||||| |||||    
T  7125002 ttgatagtggattggagagtacaatctctcctccagagtaggtcaagcaaagaccgaactgggtgaacaatctctttgtgtt 7125083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 36994609 - 36994693
Alignment:
Q  4 ctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaat 89  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||| ||| | ||| |||  |||| |||||||||||| ||||||    
T  36994609 ctttgtaagaactcattgatagtggattggagagatcaatctctcccccatattagatca-agttggaccgaactgggtcaacaat 36994693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 91
Target Start/End: Original strand, 5871905 - 5871991
Alignment:
Q  4 ctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    ||||| ||||| || ||||||||||||| ||||||| ||||||||| ||||| ||||||| | ||| |||||||||||| ||||||||    
T  5871905 ctttgcaagaactctttgatagtggattagagagatcaatctctcccccagattaggtcaagtttg-accgaactgggtcaacaatct 5871991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 13009527 - 13009468
Alignment:
Q  4 ctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtca 63  Q
    ||||||||||| ||||||||||||||||||||||||  |||||||||||| | |||||||    
T  13009527 ctttgtaagaactcattgatagtggattggagagatcgatctctcctccaaattaggtca 13009468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 3913532 - 3913578
Alignment:
Q  3 tctttgtaagaattcattgatagtggattggagagattaatctctcc 49  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||    
T  3913532 tctttgtaagaactcattgatagtggattggagagatcaatctctcc 3913578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 5207924 - 5207866
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtca 63  Q
    |||||||||| ||||||||||||||||||| |||| ||||||||  |||||||||||||    
T  5207924 tttgtaagaactcattgatagtggattggaaagatcaatctctctcccagagtaggtca 5207866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 12744133 - 12744087
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctct 47  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||    
T  12744133 tctctttgtaagaactcattgatagtggattggagagatcaatctct 12744087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 12745522 - 12745476
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctct 47  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||    
T  12745522 tctctttgtaagaactcattgatagtggattggagagatcaatctct 12745476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 37229807 - 37229745
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtca 63  Q
    |||||||||||||| ||||| |||||||||||||||||| |||||||||  || |||||||||    
T  37229807 tctctttgtaagaactcatttatagtggattggagagatcaatctctccctcatagtaggtca 37229745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 43 - 138
Target Start/End: Complemental strand, 38811235 - 38811143
Alignment:
Q  43 tctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctctt-ggtgttgttgtctatttttctctactctctttatcttgtttatt 138  Q
    ||||||| | |||||||||||| |||| |||||||||||| |||||| |||| ||||||||| ||   ||||||||||||||||||| |||||||||    
T  38811235 tctctccccaagagtaggtcattgttggaccgaactgggtaaacaat-tcttcggtgttgttctc---ttttctctactctctttatattgtttatt 38811143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 287
Target Start/End: Complemental strand, 27416844 - 27416791
Alignment:
Q  234 ccacgaatttaaatttcattaatgtgaaatttggaattgaccgaattcacaaca 287  Q
    |||||||| ||||||| ||| ||||||| |||||||||||||||||||||||||    
T  27416844 ccacgaatctaaattttattgatgtgaagtttggaattgaccgaattcacaaca 27416791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 4588041 - 4588089
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcc 49  Q
    |||||||||||||| |||||||||||||||||||||||  |||||||||    
T  4588041 tctctttgtaagaactcattgatagtggattggagagaacaatctctcc 4588089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 52467422 - 52467351
Alignment:
Q  19 ttgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    ||||||||||||||||||||| ||||||||| | ||| |||||||  |||| |||||||||||| ||||||||    
T  52467422 ttgatagtggattggagagatcaatctctccccgagattaggtca-agttggaccgaactgggtcaacaatct 52467351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 237
Target Start/End: Original strand, 2209986 - 2210048
Alignment:
Q  175 attgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccac 237  Q
    ||||||||| ||| |||| ||||||||| ||||||||||  ||| ||||||||||||||||||    
T  2209986 attgttgttattgtttgtggttatttacatttggttattggttgccattgatacttgctccac 2210048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 54199992 - 54199930
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtca 63  Q
    |||||||||||||| |||||||||||| ||| ||||||| | ||||||| ||||| |||||||    
T  54199992 tctctttgtaagaactcattgatagtgaattagagagatcattctctcccccagattaggtca 54199930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 7122783 - 7122864
Alignment:
Q  19 ttgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||||||||   ||||||||||||| ||||||||| |     ||||||||||||||||||| |||| |||||    
T  7122783 ttgatagtggattggagagtacaatctctcctccatagtaggtcaagcaaagaccgaactgggtgaacaatttctttgtgtt 7122864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 12747838 - 12747794
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcc 49  Q
    |||||| ||| |||||||||||||||||||||||| |||||||||    
T  12747838 tttgtatgaactcattgatagtggattggagagatcaatctctcc 12747794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 24969194 - 24969238
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatct 45  Q
    |||||||||||||| | |||||||||||||||||||||| |||||    
T  24969194 tctctttgtaagaactaattgatagtggattggagagataaatct 24969238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 174 - 237
Target Start/End: Complemental strand, 50262597 - 50262534
Alignment:
Q  174 tattgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccac 237  Q
    ||||||||||||||||||| |||| ||  ||||| || ||  ||||||||||||||||||||||    
T  50262597 tattgttgttgttgcttgtggttaattttttttgcttgttggttgtcattgatacttgctccac 50262534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 174 - 237
Target Start/End: Complemental strand, 50673749 - 50673686
Alignment:
Q  174 tattgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccac 237  Q
    |||||||||| |||||| | || |||||| ||||||||||  ||| ||||||||||||||||||    
T  50673749 tattgttgttattgcttatggtgatttacatttggttattggttgacattgatacttgctccac 50673686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 109 - 159
Target Start/End: Original strand, 32091627 - 32091677
Alignment:
Q  109 tttttctctactctctttatcttgtttattctttggttagattgtgatttt 159  Q
    ||||||||||| |||||||||||||||||||||| |||  |||||| ||||    
T  32091627 tttttctctacgctctttatcttgtttattctttagttcaattgtggtttt 32091677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 51337146 - 51337231
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaaca 87  Q
    ||||||| |||||| |||||||||||| ||| ||||||| |||||||||  || | |||||||  |||| |||||||||||| ||||    
T  51337146 tctctttttaagaactcattgatagtgtattagagagatcaatctctcccacacattaggtca-agttggaccgaactgggtaaaca 51337231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 5396700 - 5396775
Alignment:
Q  22 atagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgt 99  Q
    |||||||||||||||| |   ||||||||||||| ||||||||  ||| |||||||||||| |||||||| |||||||    
T  5396700 atagtggattggagagctgc-tctctcctccagattaggtcata-ttggaccgaactgggtcaacaatcttttggtgt 5396775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 154
Target Start/End: Complemental strand, 6199842 - 6199805
Alignment:
Q  117 tactctctttatcttgtttattctttggttagattgtg 154  Q
    ||||||||||||||||||| |||||||||| |||||||    
T  6199842 tactctctttatcttgtttgttctttggttcgattgtg 6199805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 253
Target Start/End: Original strand, 12119856 - 12119893
Alignment:
Q  216 ttgtcattgatacttgctccacgaatttaaatttcatt 253  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  12119856 ttgtcattgatacttgctccatgaatctaaatttcatt 12119893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 91
Target Start/End: Original strand, 16623322 - 16623389
Alignment:
Q  22 atagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||||| |   ||||||||||||| ||||||||  |||||||||||||||| ||||||||    
T  16623322 atagtggattggagagctgc-tctctcctccagattaggtcata-ttgaaccgaactgggtcaacaatct 16623389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 87
Target Start/End: Complemental strand, 21703912 - 21703836
Alignment:
Q  10 aagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaaca 87  Q
    ||||| ||||||| ||||||||||||| || ||||| ||| ||| |||||||||| |||  |||||||||||| ||||    
T  21703912 aagaactcattgacagtggattggagatatcaatctatcc-ccatagtaggtcattgtttgaccgaactgggtaaaca 21703836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Original strand, 34113001 - 34113034
Alignment:
Q  110 ttttctctactctctttatcttgtttattctttg 143  Q
    |||||||||||| |||||||||||||||||||||    
T  34113001 ttttctctactcactttatcttgtttattctttg 34113034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 40632711 - 40632772
Alignment:
Q  174 tattgttgttgttgcttgttgtt-atttacttttggttattaattgtcattgatacttgctc 234  Q
    |||||||||| |||||||| ||| |||||| ||||||||||  ||| |||||||||||||||    
T  40632711 tattgttgttattgcttgtggtttatttacatttggttattggttgccattgatacttgctc 40632772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 203 - 259
Target Start/End: Original strand, 41961690 - 41961746
Alignment:
Q  203 ttttggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgtg 259  Q
    |||||||||||  ||||||||||||||||| ||||  || ||||||||||| |||||    
T  41961690 ttttggttattggttgtcattgatacttgccccacagatctaaatttcattgatgtg 41961746  T

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Target: chr1 (Bit Score: 133; Significance: 5e-69; HSPs: 74)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 42298061 - 42297894
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  42298061 tctctttgtaagaactcattgatagtggattgaagagatcaatctctcctccagagtaggtcatggttggaccgaactgggtgaacaatctcttggtgtt 42297962  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcact 169  Q
    ||||||||||||||| |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||    
T  42297961 gttgtctatttttctttactct-tttatcttgtttattatttggttggattgtgattttgctatgcact 42297894  T

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Target: chr1; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 37033158 - 37032991
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||| || |||||    
T  37033158 tctctttgtaagaactcattgatagtggattggagagattaatctcttctccatagtaggtcatggttggaccgaactgggtgaacaatctattcgtgtt 37033059  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcact 169  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  37033058 gttgtcta-ttttctctactctctttatcttgtttatcctttggttagagtgtgattttgctatgcact 37032991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 290
Target Start/End: Original strand, 37168380 - 37168681
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||  |||| |||||||||||||||| || ||||||||||    
T  37168380 tctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtca-agttggaccgaactgggtgaac-atttcttggtgtt 37168477  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcactagattat--------------tgttgttgtt 186  Q
    ||| ||   |||||| ||||||||||||||||||||||| |||||| ||||||| |||||||||||||| ||||||              | ||||||||    
T  37168478 gttatc---ttttctttactctctttatcttgtttattccttggtttgattgtggttttgctatgcacttgattatagactaggtctatatattgttgtt 37168574  T
Q  187 gcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttggaatt---gaccgaattcac 283  Q
    |||||  ||||||||| ||||||||||  ||||||||||||||||||| |||||| ||||||||||| ||| || ||||||||||   || |||||||||    
T  37168575 gcttgaggttatttacatttggttattggttgtcattgatacttgctctacgaatctaaatttcattgatgcgagatttggaatttgagatcgaattcac 37168674  T
Q  284 aacaagt 290  Q
    |||||||    
T  37168675 aacaagt 37168681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 1 - 288
Target Start/End: Original strand, 28242387 - 28242689
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||| || ||||||||||    
T  28242387 tctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactgggtgaac-atttcttggtgtt 28242484  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgt-gattttgctatgcactagatt----------------attgttgtt 183  Q
    ||| ||   ||||||||||||||||||||||||||||  ||| |||||||||| | ||||||||| |||| | ||                |||||||||    
T  28242485 gttatc---ttttctctactctctttatcttgtttatcattttgttagattgtggtttttgctattcacttggtttctaaattagatctagattgttgtt 28242581  T
Q  184 gttgcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttggaatt---gaccgaatt 280  Q
    ||||||||  ||||||||| ||||||||||  |||||||||||||||||||||||||| ||||||||||| ||||||  |||||||||   |||||||||    
T  28242582 gttgcttgaggttatttacatttggttattggttgtcattgatacttgctccacgaatctaaatttcattgatgtgaggtttggaatttgagaccgaatt 28242681  T
Q  281 cacaacaa 288  Q
    ||||||||    
T  28242682 cacaacaa 28242689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 47255426 - 47255259
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||| || ||||||||||    
T  47255426 tctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactgggtgaac-atttcttggtgtt 47255328  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcact 169  Q
    ||| | | ||||  | ||||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  47255327 gttattttttttcttttactctctttatcttgtttatcctttggttagattgtggttttgctatgcact 47255259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 13549086 - 13548923
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||  |||| |||||||||||||||| || ||||||||||    
T  13549086 tctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtca-agttggaccgaactgggtgaac-atttcttggtgtt 13548989  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcact 169  Q
    ||| ||   |||||| |||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  13548988 gttatc---ttttctttactctctttatcttgtttattctttggttggattgtggttttgctatgcact 13548923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 3 - 169
Target Start/End: Original strand, 29136331 - 29136493
Alignment:
Q  3 tctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgttgt 102  Q
    |||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||| | ||| |||||||| |||||||| | |||||||| |||    
T  29136331 tctttgtaagaactcattgatcgtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactaggtgaacatt-tcttggtgctgt 29136429  T
Q  103 tgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcact 169  Q
       |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  29136430 ---ctatttttctctactctctttatcttgtttatcctttggttagattgtggttttgctatgcact 29136493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 13547175 - 13547020
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||  |||| |||||||||||||||| || ||||||||||    
T  13547175 tctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtca-agttggaccgaactgggtgaac-atttcttggtgtt 13547078  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgc 161  Q
    ||| ||   |||||| |||||||||||||||||||||||||||||| ||||||| ||||||    
T  13547077 gttatc---ttttctttactctctttatcttgtttattctttggttggattgtggttttgc 13547020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 260
Target Start/End: Original strand, 47115254 - 47115525
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    ||||||||||| ||  ||||||||||||||||||||||| ||||||| |||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  47115254 tctctttgtaaaaacccattgatagtggattggagagatcaatctctgctccagagtaggtcattgttggaccgaactgggtgaac-atttcttgatgtt 47115352  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgca--------ctagatt--------attgttgttg 184  Q
    ||| ||   |||||||| |||| |||||||||||||| |||| ||||||||||| ||||| ||||||        |||||||        |||||||||     
T  47115353 gttatc---ttttctctgctctttttatcttgtttatccttttgttagattgtggttttgttatgcacttgttttctagattagatctagattgttgtta 47115449  T
Q  185 ttgcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgtga 260  Q
    ||||||||  |||||||| |||| || || ||||||||||||||||||||||||||| ||||||| ||| ||||||    
T  47115450 ttgcttgtgattatttacatttgattgttgattgtcattgatacttgctccacgaatctaaattttattgatgtga 47115525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 31925793 - 31925498
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||  |||| |||||||| ||||||| || ||||||||||    
T  31925793 tctctttgtaagaactcattgatagtggattggagagatcaatctctcctctagagtaggtca-agttggaccgaactaggtgaac-atttcttggtgtt 31925696  T
Q  101 gttgtctatttttctctactctctttatcttgt-ttattctttggttagattgtgattttgctatgcactagat----------------tattgttgtt 183  Q
    ||| |   ||||||| ||||||| ||||||||| ||||||||||||| ||||||| |||||||||||||| | |                |||| |||||    
T  31925695 gttat---tttttctttactctcgttatcttgtattattctttggttggattgtggttttgctatgcacttggtttatagactaggtctatattattgtt 31925599  T
Q  184 gttgcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttggaatt--gaccgaattc 281  Q
     |||||||| ||||      ||||||| ||  ||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||  ||||||||||    
T  31925598 attgcttgtggtta-----atttggttgttggttgtcattgatacttgctctacgaatctaaatttcattaatgtgaagtttggaattcagaccgaattc 31925504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 271
Target Start/End: Complemental strand, 7482316 - 7482030
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| |||||||||||| ||||||||||| |||||||||| ||||||||||||  |||| |||||||| ||||||| || || |||| ||    
T  7482316 tctctttgtaagaactcattgatagtgaattggagagatcaatctctccttcagagtaggtca-agttggaccgaactaggtgaac-atttcatggtatt 7482219  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcactagat-----------------tattgttgtt 183  Q
    ||  ||   |||||| ||||||||||||||||||||||| |||||| ||||||| |||||||||||||| |||                 ||||||||||    
T  7482218 gtcatc---ttttctttactctctttatcttgtttattccttggttggattgtggttttgctatgcacttgattatagactaggtctatatattgttgtt 7482122  T
Q  184 gttgcttgttgttatttac----ttttggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttggaatt 271  Q
    ||||||||  |||||||||     ||||||||||  |||||||||||||||||||||||||||||||||| ||| ||||||  |||||||||    
T  7482121 gttgcttgaggttatttacattaatttggttattggttgtcattgatacttgctccacgaatttaaattttattgatgtgaggtttggaatt 7482030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 11348780 - 11349030
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    ||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||||||  |||| ||||||||| |||||| || ||||| ||||    
T  11348780 tctctttctaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtca-agttggaccgaactgagtgaac-atttcttgatgtt 11348877  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttg-gttagattgtgattttgctatgcactagat----------------tattgttgtt 183  Q
    ||| ||| || ||  || ||||||||||||||||||||| |||  || ||||||| |||||||||||||| | |                ||||||||||    
T  11348878 gttatcttttctttact-ctctctttatcttgtttattccttgctttggattgtggttttgctatgcacttggtttatagactaggtctatattgttgtt 11348976  T
Q  184 gttgcttgttgttatttacttttggttattaattgtcattgatacttgctccac 237  Q
     |||||||| ||||||||| |||| |||||||||||||||||||||||||||||    
T  11348977 attgcttgtggttatttacatttgattattaattgtcattgatacttgctccac 11349030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 37876852 - 37876689
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    ||||||||||| || ||||||||||||||||| |||||| ||||||||||||||||||  |||  ||||||||||||||||||||| || ||||||||||    
T  37876852 tctctttgtaataactcattgatagtggattgcagagatcaatctctcctccagagtacatca-agttgaaccgaactgggtgaac-atttcttggtgtt 37876755  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcact 169  Q
    ||| ||   |||||| |||||||||||||||||||||  |||||||  |||||| |||| |||||||||    
T  37876754 gttatc---ttttctttactctctttatcttgtttatcatttggttgaattgtggtttttctatgcact 37876689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 8550870 - 8550783
Alignment:
Q  4 ctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  8550870 ctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 8550783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 2926602 - 2926730
Alignment:
Q  12 gaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgttgttgtctattt 111  Q
    |||||||||| ||||||||||||||||| ||||||| || ||||||||||||| |||| |||||||| ||| ||||||   ||||||||||| |   |||    
T  2926602 gaattcattggtagtggattggagagatcaatctcttctgcagagtaggtcattgttgcaccgaactaggtaaacaattctttggtgttgttct---ttt 2926698  T
Q  112 ttctctactctctttatcttgtttattctttg 143  Q
    | ||||||||||||||||||||||||||||||    
T  2926699 tactctactctctttatcttgtttattctttg 2926730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 19754577 - 19754737
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||  |||| |||||||  |||| |||||| ||||| |||||| | |||||| |    
T  19754577 tctctttgtaagaactcattgatagtggattggagagatcaatctctccctcagattaggtca-agttggaccgaagtgggtcaacaat-ttttggtg-t 19754673  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgca 167  Q
    ||| ||   |||||| ||||||||||||||||||||| |||| ||| ||||||| ||||||||||||    
T  19754674 gttatc---ttttctttactctctttatcttgtttatccttttgttggattgtggttttgctatgca 19754737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 5 - 91
Target Start/End: Original strand, 3189416 - 3189502
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||| | ||| |||||||||||||||||||||    
T  3189416 tttgtaagaactcattgatagtggattggagagatcaatctctcatccagagtaggtcaagtttggaccgaactgggtgaacaatct 3189502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 5 - 91
Target Start/End: Original strand, 3198233 - 3198319
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||| | ||| |||||||||||||||||||||    
T  3198233 tttgtaagaactcattgatagtggattggagagatcaatctctcatccagagtaggtcaagtttggaccgaactgggtgaacaatct 3198319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 5 - 91
Target Start/End: Original strand, 3207072 - 3207158
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||| | ||| |||||||||||||||||||||    
T  3207072 tttgtaagaactcattgatagtggattggagagatcaatctctcatccagagtaggtcaagtttggaccgaactgggtgaacaatct 3207158  T

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Target: chr1; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 9987287 - 9987381
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgt 99  Q
    |||| ||||| ||||||||||||||||||||||   ||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||    
T  9987287 tttgcaagaactcattgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgt 9987381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 13316438 - 13316348
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||| ||||| |||||||||||||||||||||| | ||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  13316438 tctctttggaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 13316348  T

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Target: chr1; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 20622319 - 20622225
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgt 99  Q
    |||||||||| || |||||||||||||||||||   ||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||    
T  20622319 tttgtaagaactctttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgt 20622225  T

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Target: chr1; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 40282463 - 40282557
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgt 99  Q
    |||||||||| || |||||||||||||||||||   ||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||    
T  40282463 tttgtaagaactctttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgt 40282557  T

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Target: chr1; HSP #24
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 5 - 91
Target Start/End: Original strand, 51765483 - 51765569
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||| |||||||||||||||||||||| | |||||||||||||||||||| || | ||| |||||||||||||||||||||    
T  51765483 tttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggacaagtttggaccgaactgggtgaacaatct 51765569  T

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Target: chr1; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 9036502 - 9036596
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgt 99  Q
    |||||||||| || |||||||||||||| ||||   ||||||||||| ||||||||||| | ||| |||||||||||||||||||||||||||||    
T  9036502 tttgtaagaactctttgatagtggattgaagagtacaatctctcctcgagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgt 9036596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 13659422 - 13659333
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||| |  |||| |||||||||||| ||||||||    
T  13659422 tctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagagtaggtta-agttggaccgaactgggtcaacaatct 13659333  T

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Target: chr1; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 20762754 - 20762844
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||| ||||||| |||||||||||||||||||||||| |||||||||| |||||||||||| | ||| |||||||| ||||| ||||||    
T  20762754 tctcttcgtaagaactcattgatagtggattggagagatcaatctctcctacagagtaggtcaagtttggaccgaactaggtgaccaatct 20762844  T

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Target: chr1; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 21054044 - 21054138
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgt 99  Q
    |||||||||| || |||||||||||||||||||   || |||||||||||||||||||| | ||| |||||||||||||| ||||||||||||||    
T  21054044 tttgtaagaactctttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctcttggtgt 21054138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 28220312 - 28220223
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||| ||||| |||||||  |||| |||||||||||| ||||||||    
T  28220312 tctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattaggtca-agttggaccgaactgggtcaacaatct 28220223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 44203732 - 44203813
Alignment:
Q  19 ttgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||||||||   ||||||||||||||||||||||| | ||| |||||||||||||||||||||||| |||||    
T  44203732 ttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtt 44203813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 193693 - 193790
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    ||||||||||| || |||||||||||||||||||||||| ||||||| |||||||||| ||||  |||| |||||||||||||||| || ||||||||||    
T  193693 tctctttgtaataactcattgatagtggattggagagatcaatctcttctccagagtatgtca-agttggaccgaactgggtgaac-atttcttggtgtt 193790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 834250 - 834164
Alignment:
Q  4 ctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    ||||||||||| ||||||||||||||||||||||||  |||||||| |||||||||||||  |||| |||||||||||| ||||||||    
T  834250 ctttgtaagaactcattgatagtggattggagagatctatctctcccccagagtaggtca-agttggaccgaactgggtcaacaatct 834164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 34603659 - 34603815
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| |||||||| |||||||| |||||| |||||||||||||||||||||||  |||| ||||||               || ||||||    
T  34603659 tctctttgtaagaactcattgatggtggattgaagagatcaatctctcctccagagtaggtca-agttggaccgaa---------------ctaggtgtt 34603742  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcactagattat 176  Q
    ||| ||   |||||| ||||||||||||||||||||||| |||||| ||||||| |||||||||||||| ||||||    
T  34603743 gttatc---ttttctttactctctttatcttgtttattccttggttggattgtggttttgctatgcacttgattat 34603815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 3156947 - 3157036
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||| ||| | |||||||  |||| |||||||||||| ||||||||    
T  3156947 tctctttgtaagaactcattgatagtggattggagagatcaatctctcccccatattaggtca-agttggaccgaactgggtcaacaatct 3157036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 28223507 - 28223418
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||| ||| | |||||||  |||| |||||||||||| ||||||||    
T  28223507 tctctttgtaagaactcattgatagtggattggagagatcaatctctcccccatattaggtca-agttggaccgaactgggtcaacaatct 28223418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 28265640 - 28265551
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| || ||||||||||||||||||||| ||||||||| ||||| |||||||  |||| |||||||||||| ||||||||    
T  28265640 tctctttgtaagaactctttgatagtggattggagagatcaatctctcccccagattaggtca-agttggaccgaactgggtcaacaatct 28265551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 45644440 - 45644351
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| |||||||||||||||||||||||| ||| ||||| ||||| |||||||  |||| |||||||||||| ||||||||    
T  45644440 tctctttgtaagaactcattgatagtggattggagagatcaatatctcccccagattaggtca-agttggaccgaactgggtcaacaatct 45644351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 46065000 - 46065089
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| ||||| |||||||||||||||||| ||||||||| |||||||||||||  |||| | |||||||||| ||||||||    
T  46065000 tctctttgtaagaactcattcatagtggattggagagatcaatctctcccccagagtaggtca-agttggatcgaactgggtaaacaatct 46065089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 19752768 - 19752928
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| |||||||||| ||||||||||||| ||||||||  ||| | |||||||  |||| |||||||| ||| |||||||| |||    |    
T  19752768 tctctttgtaagaactcattgatagaggattggagagatcaatctctctcccatattaggtca-agttggaccgaactaggtcaacaatcttttg----t 19752862  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcact 169  Q
    ||| ||   |||| | ||||||||||||||||||||| |||| ||| ||||||| |||| |||||||||    
T  19752863 gttatc---ttttatttactctctttatcttgtttatccttttgttggattgtggttttactatgcact 19752928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 4552720 - 4552634
Alignment:
Q  4 ctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    ||||||||||| ||||||||| |||||||||||||| |||||||||  ||||||||||||  |||| |||||||||||| ||||||||    
T  4552720 ctttgtaagaactcattgataatggattggagagatcaatctctccctcagagtaggtca-agttggaccgaactgggtcaacaatct 4552634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 1833604 - 1833666
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtca 63  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||| ||||| |||||||    
T  1833604 tctctttgtaagaactcattgatagtggattggagagatcaatctctccaccagattaggtca 1833666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 31659320 - 31659409
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| | |||||||||||||||||||||| |||||||||  |||| |||||||  |||| |||||||||||| ||||||||    
T  31659320 tctctttgtaagaacttattgatagtggattggagagatcaatctctccctcagattaggtca-agttggaccgaactgggtcaacaatct 31659409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 5 - 91
Target Start/End: Original strand, 44455246 - 44455331
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||| |||||||||||||||||||||||| ||||||||| ||||| ||||||| | ||| |||||||||||| ||| ||||    
T  44455246 tttgtaagaactcattgatagtggattggagagatcaatctctcccccagattaggtcaagtttg-accgaactgggtcaacgatct 44455331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 49918432 - 49918521
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||| ||| | |||||||  |||| |||||||| ||| ||||||||    
T  49918432 tctctttgtaagaactcattgatagtggattggagagatcaatctctcccccaaattaggtca-agttggaccgaactaggtcaacaatct 49918521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 216 - 288
Target Start/End: Complemental strand, 31929418 - 31929344
Alignment:
Q  216 ttgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttggaatt--gaccgaattcacaacaa 288  Q
    |||||||||||||||||||||||||| ||||||||||| | ||||| |||| ||||  |||||||||||||||||    
T  31929418 ttgtcattgatacttgctccacgaatctaaatttcattgacgtgaagtttgaaattgagaccgaattcacaacaa 31929344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 13138062 - 13137973
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    ||||||||||||||  |||||||||||||||| |||||  ||||||||| | ||||||||||||  ||| |||||||||||| ||||||||    
T  13138062 tctctttgtaagaacacattgatagtggattgaagagagcaatctctcccctagagtaggtcat-attggaccgaactgggtcaacaatct 13137973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 37503643 - 37503589
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccaga 55  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||| |||||    
T  37503643 tctctttgtaagaactcattgatagtggattggagagatcaatctctcccccaga 37503589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 50167261 - 50167172
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    ||||||||||| || |||||||||||||||||||||||| ||||||||| ||||| ||| |||  |||| |||||||| ||| ||||||||    
T  50167261 tctctttgtaaaaactcattgatagtggattggagagatcaatctctcccccagattagctca-agttggaccgaactaggtcaacaatct 50167172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 43 - 162
Target Start/End: Complemental strand, 12318568 - 12318452
Alignment:
Q  43 tctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgttgttgtctatttttctctactctctttatcttgtttattcttt 142  Q
    ||||||| ||| ||||| ||||  ||| |||||||| ||| |||||| | ||||||||||| |||   ||||| ||||| ||||||||||||||||||||    
T  12318568 tctctcccccatagtagttcattattggaccgaactaggtaaacaattttttggtgttgttctct---tttctttactccctttatcttgtttattcttt 12318472  T
Q  143 ggttagattgtgattttgct 162  Q
    ||||  ||| ||||||||||    
T  12318471 ggttcaattatgattttgct 12318452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 196991 - 196904
Alignment:
Q  4 ctttgtaagaattcattgatagtggattggagagattaatctct-cctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    ||||||||||| ||||||||||||||||||||||||| |||||| || ||||| |||||||  |||| |||||||||| | ||||||||    
T  196991 ctttgtaagaactcattgatagtggattggagagatttatctctccccccagattaggtca-agttggaccgaactggatcaacaatct 196904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 6808534 - 6808692
Alignment:
Q  1 tctctttgtaa-gaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgt 99  Q
    ||||||||||| ||| ||||| |||||||||||||||||| ||||||| |  |||||||||| || ||||  ||||||| | | || | | |||||| ||    
T  6808534 tctctttgtaaagaactcatttatagtggattggagagatcaatctcttcctcagagtaggttattgttggtccgaactagataaatatt-tcttggagt 6808632  T
Q  100 tgttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgct 162  Q
    |||| | | ||||   |||||||||||||||||||||| |||| ||| ||| |||||||||||    
T  6808633 tgttctttgtttt---ctactctctttatcttgtttatgctttagtttgatagtgattttgct 6808692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 3847204 - 3847118
Alignment:
Q  4 ctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    ||||||||||| ||||||||||||||||||||||||  |||||| | ||||| |||||||  |||| |||||||| ||| ||||||||    
T  3847204 ctttgtaagaactcattgatagtggattggagagatccatctcttccccagattaggtca-agttggaccgaacttggtcaacaatct 3847118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 15820389 - 15820451
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtca 63  Q
    ||||||| |||||| |||||||||||| |||| |||||| |||||||| ||||||||||||||    
T  15820389 tctctttttaagaactcattgatagtgcattgaagagataaatctctcatccagagtaggtca 15820451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 23555351 - 23555290
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtca 63  Q
    |||||||||||||| |||||||||||||||||||||| | ||||||||| ||| |||||||||    
T  23555351 tctctttgtaagaactcattgatagtggattggagagttcaatctctcc-ccatagtaggtca 23555290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 36683766 - 36683824
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtca 63  Q
    |||||||||| ||||||||||||||||| ||| || ||||||||| |||||||||||||    
T  36683766 tttgtaagaactcattgatagtggattgtagaaatcaatctctcccccagagtaggtca 36683824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 41360996 - 41361093
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgt 99  Q
    |||||||||||||| || |||||||||||||  |||||| ||| ||||| ||| ||||||||||  ||| |||||||| ||| |||||| |||||||||    
T  41360996 tctctttgtaagaactcgttgatagtggattaaagagatcaatatctcccccatagtaggtcat-attggaccgaactaggtcaacaatatcttggtgt 41361093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 50169296 - 50169207
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||| | ||||||||||||||||| |||||| ||||||||| | ||| |||||||  |||| |||||||||| | ||||||||    
T  50169296 tctctttgtaagtactcattgatagtggattgaagagatcaatctctcccctagattaggtca-agttggaccgaactggatcaacaatct 50169207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 22079398 - 22079462
Alignment:
Q  1 tctctttgtaa-gaattcattgatagtggattggagagattaatctctcctccagagtaggtcat 64  Q
    ||||||||||| ||| ||||||||| |||||||||||||| ||| ||||||||| ||||||||||    
T  22079398 tctctttgtaaagaactcattgatattggattggagagatcaatttctcctccaaagtaggtcat 22079462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 16455703 - 16455750
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctc 48  Q
    ||||| |||||||| |||||||||||||||||||||||| ||||||||    
T  16455703 tctctgtgtaagaactcattgatagtggattggagagatcaatctctc 16455750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 37559954 - 37559864
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctcc-agagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| || ||||||||| ||||||||||| ||||||||| || ||| |||||||  |||| |||||||| ||| ||||||||    
T  37559954 tctctttgtaagaactcgttgatagtgaattggagagatcaatctctccccctagattaggtca-agttggaccgaacttggtcaacaatct 37559864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 258
Target Start/End: Original strand, 34603836 - 34603914
Alignment:
Q  180 tgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgt 258  Q
    ||||| ||||||  ||||||||| |||| |||||  |||||||||||||||||||||| ||| || |||||||| ||||    
T  34603836 tgttggtgcttgaggttatttacatttgattattggttgtcattgatacttgctccacaaatctagatttcattgatgt 34603914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 10925317 - 10925397
Alignment:
Q  10 aagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    ||||||||||||||||||||||||||| || ||||||||| | ||| ||||| |  |||| | |||||||||| ||||||||    
T  10925317 aagaattcattgatagtggattggagaaatcaatctctcccctagattaggt-aaagttggatcgaactgggtcaacaatct 10925397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 203 - 288
Target Start/End: Original strand, 41136106 - 41136190
Alignment:
Q  203 ttttggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttggaattgaccgaattcacaacaa 288  Q
    |||||||||||  |||||| | |||||| | |||||||| ||||||||||| |||||| ||||||| || |||||||| |||||||    
T  41136106 ttttggttattggttgtcaataatactttccccacgaatctaaatttcattgatgtgagatttggagtt-accgaatttacaacaa 41136190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 162
Target Start/End: Complemental strand, 49893623 - 49893536
Alignment:
Q  72 ccgaactgggtgaacaatctcttggtgttgttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgct 162  Q
    |||||||||||||||||   |||||||||||| |||||    ||| ||||||||||||||| || |||||||||| |||||| || |||||    
T  49893623 ccgaactgggtgaacaaatccttggtgttgttctctata---ctccactctctttatcttgattgttctttggttcgattgttatattgct 49893536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 10 - 69
Target Start/End: Original strand, 5459997 - 5460056
Alignment:
Q  10 aagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttg 69  Q
    ||||| ||||||||||| |||||||||||| |||||||| || ||||||| |||| ||||    
T  5459997 aagaactcattgatagtagattggagagatcaatctctcatctagagtagatcattgttg 5460056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 154
Target Start/End: Complemental strand, 9109397 - 9109355
Alignment:
Q  113 tctctactctctttatctt-gtttattctttggttagattgtg 154  Q
    ||||||||||||||||||| ||||||||||||||| |||||||    
T  9109397 tctctactctctttatctttgtttattctttggtttgattgtg 9109355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 30476532 - 30476486
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctct 47  Q
    |||||||||||||| ||||||||| ||||||||| |||| |||||||    
T  30476532 tctctttgtaagaactcattgatactggattggacagatcaatctct 30476486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 8871130 - 8871089
Alignment:
Q  19 ttgatagtggattggagagattaatctctcctccagagtagg 60  Q
    ||||||||||||||||||||| ||||||||| ||| ||||||    
T  8871130 ttgatagtggattggagagatcaatctctcccccatagtagg 8871089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 237
Target Start/End: Original strand, 29136516 - 29136577
Alignment:
Q  176 ttgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccac 237  Q
    |||||||| |||||||| |||| |||  ||||||||||  ||||||||| ||||||||||||    
T  29136516 ttgttgttattgcttgtggttagttatatttggttattggttgtcattggtacttgctccac 29136577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 237
Target Start/End: Complemental strand, 37876665 - 37876604
Alignment:
Q  177 tgttgttgttgcttgttgtt-atttacttttggttattaattgtcattgatacttgctccac 237  Q
    ||||||| |||||||| ||| |||||| ||||||||||  ||| ||||||||||||||||||    
T  37876665 tgttgtttttgcttgtggtttatttacatttggttattggttgccattgatacttgctccac 37876604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 162
Target Start/End: Original strand, 41136005 - 41136057
Alignment:
Q  109 tttttctctactctctttatcttgtttattctttggttagattgtgattttgct 162  Q
    |||||||||||||||||||||||| |||||||||| ||   |||||||||||||    
T  41136005 tttttctctactctctttatcttg-ttattctttgattcagttgtgattttgct 41136057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 203 - 287
Target Start/End: Complemental strand, 12318399 - 12318316
Alignment:
Q  203 ttttggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttggaattgaccgaattcacaaca 287  Q
    |||||||||||  ||| ||||||||||||| ||| | ||  |||||||||| |||||| |||||||  | |||||||||||||||    
T  12318399 ttttggttattggttgccattgatacttgccccatgcatccaaatttcattgatgtgagatttggagct-accgaattcacaaca 12318316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 13938219 - 13938300
Alignment:
Q  1 tctctttgtaagaat-tcattgatagtggattggagagattaatctctcctccaga-gtaggtcatggttgaaccgaactgggt 82  Q
    ||||||||||||||  ||||||||||||||||||||||||   ||||||| ||||| ||||||||| ||||  | |||||||||    
T  13938219 tctctttgtaagaaactcattgatagtggattggagagat--ctctctcccccagatgtaggtcattgttgggctgaactgggt 13938300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 110 - 146
Target Start/End: Original strand, 25652272 - 25652308
Alignment:
Q  110 ttttctctactctctttatcttgtttattctttggtt 146  Q
    ||||||||||||||||||| ||||||||| |||||||    
T  25652272 ttttctctactctctttattttgtttattatttggtt 25652308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 131; Significance: 8e-68; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 3808794 - 3808628
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||| |||    
T  3808794 tctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcatgattggaccgaactaggtgaacaatctcttggggtt 3808695  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgca 167  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||    
T  3808694 gttgtctatttttctctactctctttatcttgtttatcctttggttagattatggttttgctatgca 3808628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 26800670 - 26800969
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||| ||||| || ||||||||||    
T  26800670 tctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactggatgaac-atttcttggtgtt 26800767  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcactagatt----------------attgttgttg 184  Q
    ||| ||   ||||||||||||| ||||||||||||||  ||||||||||||||| |||||||||||||| | ||                |||||||||     
T  26800768 gttatc---ttttctctactctttttatcttgtttatcttttggttagattgtggttttgctatgcacttgttttctagactagatctagattgttgtta 26800864  T
Q  185 ttgcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttggaattga--ccgaattca 282  Q
    |||||||| || |||||| ||||||||||  ||| |||||||||||||||||||||| ||||||||||| ||||||  |||| | ||||  |||||||||    
T  26800865 ttgcttgtggtaatttacatttggttattggttgccattgatacttgctccacgaatctaaatttcattgatgtgaggtttgaatttgagtccgaattca 26800964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 5043709 - 5043880
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| ||||||||||| |||||||||||| ||||||||||||| |||||||||| |||| |||||||||||||||| || ||||||||||    
T  5043709 tctctttgtaagaactcattgatagtagattggagagatcaatctctcctccatagtaggtcattgttggaccgaactgggtgaac-atttcttggtgtt 5043807  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcactagattat 176  Q
    ||| ||   |||||| ||||||||||||||||||||||  |||||| ||||||| |||||||||||||| ||||||    
T  5043808 gttatc---ttttctttactctctttatcttgtttatttcttggttggattgtggttttgctatgcacttgattat 5043880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 603174 - 603007
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| || |||||||||||||||||| || ||||||||| | ||| ||||||| | ||| |||||||||||| |||||||||||| ||||    
T  603174 tctctttgtaagaactcgttgatagtggattggagaaatcaatctctccccaagattaggtcaag-ttggaccgaactgggtcaacaatctcttgatgtt 603076  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcact 169  Q
    ||||||||||||||||||||||||||||||||||||| | |||||| ||||||| |||| |||||||||    
T  603075 gttgtctatttttctctactctctttatcttgtttatgccttggttggattgtggttttactatgcact 603007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 21589013 - 21589176
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||  |||| |||||||||||||||| || ||||||||||    
T  21589013 tctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtca-agttggaccgaactgggtgaac-atttcttggtgtt 21589110  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcact 169  Q
    ||| ||   |||||| |||| || ||||||||||||||| || ||| ||||||| ||||||||||||||    
T  21589111 gttatc---ttttctttactttccttatcttgtttattccttagttggattgtggttttgctatgcact 21589176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 22424911 - 22424758
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| ||||| |||||||||||||||||| |||||||||| ||||||||||||| |||| |||| ||||||||||| || ||||||||||    
T  22424911 tctctttgtaagaactcatt-atagtggattggagagatcaatctctccttcagagtaggtcattgttggaccgtactgggtgaac-atttcttggtgtt 22424814  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgatttt 159  Q
    ||| ||   |||||||||||||||||||||||||||| ||| |||||||||||| ||||    
T  22424813 gttatc---ttttctctactctctttatcttgtttatccttaggttagattgtggtttt 22424758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 288
Target Start/End: Complemental strand, 2973025 - 2972720
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||  |||  |||||||| ||||||| || ||||||||||    
T  2973025 tctctttgtaagaactcattgatagtggattggagagatcaatctctcctcaagagtaggtca-agttcgaccgaactaggtgaac-atttcttggtgtt 2972928  T
Q  101 gttgtctattttt-ctctactctctttatcttgtttattctttggttagattgt-gattttgctatgcac--------taga--------ttattgttgt 182  Q
    ||| | | ||||| |||| |||||| ||||||||||||  |||||||||||||| | |||| ||||||||        ||||         |||||||||    
T  2972927 gttatttttttttactct-ctctctatatcttgtttatcatttggttagattgtggttttttctatgcacttagtttatagactaggtctatattgttgt 2972829  T
Q  183 tgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttggaatt---gaccgaat 279  Q
    ||||| |||| ||||||||| |||| |||||  ||| ||||||||||||||| |||||||||||||||||| ||||||  |||||||||   |||| |||    
T  2972828 tgttgtttgtggttatttacatttgattattggttgccattgatacttgctcaacgaatttaaatttcattgatgtgatgtttggaatttgagaccaaat 2972729  T
Q  280 tcacaacaa 288  Q
    |||||||||    
T  2972728 tcacaacaa 2972720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 17758105 - 17758270
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| |||||||||||||||||||||||| |||||| |||| ||||||| ||| | ||| |||||||| ||||||| || ||||||||||    
T  17758105 tctctttgtaagaactcattgatagtggattggagagatcaatctcccctctagagtagttcaagtttggaccgaactaggtgaac-atttcttggtgtt 17758203  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcact 169  Q
    ||| ||  |||   | ||| ||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  17758204 gttatc--tttccttttacgctctttatcttgtttatcctttggttagattgtggttttgctatgcact 17758270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 2171618 - 2171520
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgt 99  Q
    |||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||    
T  2171618 tctctttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgt 2171520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 5406286 - 5406196
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  5406286 tctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttgaaccgaactgggtgaacaatct 5406196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 5410611 - 5410521
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  5410611 tctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttgaaccgaactgggtgaacaatct 5410521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 5 - 169
Target Start/End: Original strand, 17763076 - 17763237
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgttgttg 104  Q
    |||| ||||| |||||||||||||||||||| ||| ||||||||||||||||||| ||| | ||| |||||||| ||||||| || |||||||||||||     
T  17763076 tttggaagaactcattgatagtggattggagtgatcaatctctcctccagagtagatcaagtttggaccgaactaggtgaac-atttcttggtgttgtta 17763174  T
Q  105 tctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcact 169  Q
    ||  ||||  | |||||||||||||||||| || |||||||||||||||  ||||||||||||||    
T  17763175 tc--ttttcttttactctctttatcttgttcatcctttggttagattgtagttttgctatgcact 17763237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 26830209 - 26830043
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||| | ||| || ||||||||||||| || ||||||||||    
T  26830209 tctctttgtaagaactcattgatagtggattggagagatcaatctctcctccaaagtaggtcaagtttg-actgaactgggtgaac-atttcttggtgtt 26830112  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttg-gttagattgtgattttgctatgcact 169  Q
    ||| ||| || ||  || ||||||||||||||||||||| |||  || ||||||| ||||||||||||||    
T  26830111 gttatcttttctttact-ctctctttatcttgtttattccttgctttggattgtggttttgctatgcact 26830043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 3072841 - 3072747
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgt 99  Q
    |||||||||| |||||||||||| ||||||||| | ||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||    
T  3072841 tttgtaagaactcattgatagtgaattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgt 3072747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 21593746 - 21593846
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||  |||| |||||||||||||||| || ||||||||||    
T  21593746 tctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtca-agttggaccgaactgggtgaac-atttcttggtgtt 21593843  T
Q  101 gtt 103  Q
    |||    
T  21593844 gtt 21593846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 31404761 - 31404671
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| || | ||| |||||||||||||||||||||    
T  31404761 tctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggccaagtttggaccgaactgggtgaacaatct 31404671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 6097533 - 6097444
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctctt 94  Q
    |||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||| | ||| ||||||||||||||||||||||||    
T  6097533 tttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctt 6097444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 5409155 - 5409066
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | ||| |||||||| ||||||||||||    
T  5409155 tctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaact-ggtgaacaatct 5409066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 5413480 - 5413391
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | ||| |||||||| ||||||||||||    
T  5413480 tctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaact-ggtgaacaatct 5413391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 16452415 - 16452325
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||| ||||| |||||||||||||||||||||| | ||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  16452415 tctctttggaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 16452325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 412188 - 412277
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctctt 94  Q
    |||||||||| |||||||||||||||| ||||| | ||||||||||||||||||||||| | ||| ||||||||||||||||||||||||    
T  412188 tttgtaagaactcattgatagtggattagagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctt 412277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 110 - 293
Target Start/End: Original strand, 25073762 - 25073943
Alignment:
Q  110 ttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcactagatt----attgttgttgttgcttgttgttatttacttt 205  Q
    |||||||| |||||||||||||||||||||||||||| |||  || |||||| || |||| | ||    |||||||||||||||||| |||||||         
T  25073762 ttttctctgctctctttatcttgtttattctttggtttgatattggttttgcaatacacttggttctagattgttgttgttgcttgtggttattt----- 25073856  T
Q  206 tggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttggaattgaccgaattcacaacaagttta 293  Q
    | |||||| ||| |||||||||||||  |||||||| |||| || ||||||| || ||||||||||| ||||||||||||||| ||||    
T  25073857 ttgttattgattatcattgatacttgtcccacgaatctaaactttattaatgcgagatttggaattg-ccgaattcacaacaatttta 25073943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 30834622 - 30834532
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||| ||||| |||||||||||||||||||||| | ||||||||||||||||||||||| | ||| ||||||||||||||| |||||    
T  30834622 tctctttggaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaataatct 30834532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 4 - 91
Target Start/End: Original strand, 16569107 - 16569193
Alignment:
Q  4 ctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||  |||| |||||||||||| ||||||||    
T  16569107 ctttgtaagaactcattgatagtggattggagagatcaatctctcctccagattaggtca-agttggaccgaactgggtcaacaatct 16569193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 9183117 - 9183028
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||||||| || ||||  |||| |||||||||||| ||||||||    
T  9183117 tctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagattatgtca-agttggaccgaactgggtcaacaatct 9183028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 33160438 - 33160348
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||  ||| | ||| ||| |||||||||||||||||    
T  33160438 tctctttgtaagaactcattgatggtggattggagagatcaatctctcctccagagtatttcaagtttggaccaaactgggtgaacaatct 33160348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 25421406 - 25421487
Alignment:
Q  19 ttgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||||||||   ||||||||||||||||||||||| | ||| |||||||||||||||||||||||| |||||    
T  25421406 ttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtt 25421487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 5 - 98
Target Start/End: Original strand, 27647946 - 27648039
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtg 98  Q
    |||||||||| || |||||||||||||||||||   || |||||||||||||||| ||| | ||| ||||||||||||||||||||||||||||    
T  27647946 tttgtaagaactctttgatagtggattggagagtacaaactctcctccagagtagatcaagtttggaccgaactgggtgaacaatctcttggtg 27648039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 16578601 - 16578511
Alignment:
Q  5 tttgtaagaattcatt-gatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctctt 94  Q
    |||||||||| ||||| |||||||||||||||||   || |||||||||||||||||||| | ||| ||||||||||||||||||||||||    
T  16578601 tttgtaagaactcatttgatagtggattggagagtgcaaactctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctt 16578511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 16616779 - 16616869
Alignment:
Q  5 tttgtaagaattcatt-gatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctctt 94  Q
    |||||||||| ||||| |||||||||||||||||   || |||||||||||||||||||| | ||| ||||||||||||||||||||||||    
T  16616779 tttgtaagaactcatttgatagtggattggagagtgcaaactctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctt 16616869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 16653197 - 16653287
Alignment:
Q  5 tttgtaagaattcatt-gatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctctt 94  Q
    |||||||||| ||||| |||||||||||||||||   || |||||||||||||||||||| | ||| ||||||||||||||||||||||||    
T  16653197 tttgtaagaactcatttgatagtggattggagagtgcaaactctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctt 16653287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 26954372 - 26954283
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||| ||| |||||||||  |||| |||||||| ||| ||||||||    
T  26954372 tctctttgtaagaactcattgatagtggattggagagatcaatctctcccccaaagtaggtca-agttggaccgaactaggtcaacaatct 26954283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 33211271 - 33211182
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| ||||| ||| |||||||||||||| ||||||||| |||||||||||||  |||| |||||||||||| ||||||||    
T  33211271 tctctttgtaagaactcatttataatggattggagagatcaatctctcccccagagtaggtca-agttggaccgaactgggtcaacaatct 33211182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 6027347 - 6027428
Alignment:
Q  19 ttgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||||||||   |||||||||||||||||| |||| | ||| |||||||||||||||||||||||| |||||    
T  6027347 ttgatagtggattggagagtacaatctctcctccagagtatgtcaagtttggaccgaactgggtgaacaatctctttgtgtt 6027428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 34167180 - 34167261
Alignment:
Q  19 ttgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||||||||   || |||||||||||||||||||| | ||| |||||||||||||||||||||||| |||||    
T  34167180 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtt 34167261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 28137492 - 28137432
Alignment:
Q  3 tctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtca 63  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||    
T  28137492 tctttgtaagaactcattgatagtggattggagagatcaatctctcccccagagtaggtca 28137432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 16554954 - 16555044
Alignment:
Q  5 tttgtaagaattcatt-gatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctctt 94  Q
    |||||||||| ||||| |||||||||||||||||   || |||||||||| ||||||||| | ||| ||||||||||||||||||||||||    
T  16554954 tttgtaagaactcatttgatagtggattggagagtgcaaactctcctccaaagtaggtcaagtttggaccgaactgggtgaacaatctctt 16555044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 16631510 - 16631600
Alignment:
Q  5 tttgtaagaattcatt-gatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctctt 94  Q
    |||||||||| ||||| |||||||||||||||||   || |||||||||| ||||||||| | ||| ||||||||||||||||||||||||    
T  16631510 tttgtaagaactcatttgatagtggattggagagtgcaaactctcctccaaagtaggtcaagtttggaccgaactgggtgaacaatctctt 16631600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 13154015 - 13154096
Alignment:
Q  19 ttgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||||||||   || |||||||||||||||||||| | ||| |||||||||||||| ||||||||| |||||    
T  13154015 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtt 13154096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 33342173 - 33342092
Alignment:
Q  19 ttgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||||||||   || |||||||||||||||||||| | ||| |||||||||||||| ||||||||| |||||    
T  33342173 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtt 33342092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 34164958 - 34165039
Alignment:
Q  19 ttgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||||||||   || |||||||||||||||||||| | ||| |||||||||||||| ||||||||| |||||    
T  34164958 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtt 34165039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 3038989 - 3038927
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtca 63  Q
    |||||||||||||| || || |||||||||||||||||||||||||||| ||||| |||||||    
T  3038989 tctctttgtaagaactctttaatagtggattggagagattaatctctcccccagattaggtca 3038927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 169
Target Start/End: Original strand, 9572689 - 9572838
Alignment:
Q  17 cattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgttgttgtctatttttctc 116  Q
    |||||||||||||||| |||||| ||||||| ||  ||||||||||||  ||||| |||||||||| ||  || ||||| ||||||| ||   |||||||    
T  9572689 cattgatagtggattgcagagatcaatctctactttagagtaggtcatcattgaaacgaactgggtaaaatatttcttgatgttgttatc---ttttctc 9572785  T
Q  117 tactctctttatcttgtttattctttggttagattgtgattttgctatgcact 169  Q
    |  | |||||||||| | ||||||||| || ||||||| | || |||||||||    
T  9572786 tcgtgtctttatcttatctattctttgattcgattgtggtatttctatgcact 9572838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 174 - 237
Target Start/End: Original strand, 5043895 - 5043958
Alignment:
Q  174 tattgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccac 237  Q
    ||||||||||||||||||  ||||||||| ||||||||||  ||||||||||||| ||||||||    
T  5043895 tattgttgttgttgcttgaggttatttacatttggttattggttgtcattgatacgtgctccac 5043958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 237
Target Start/End: Complemental strand, 26830022 - 26829959
Alignment:
Q  174 tattgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccac 237  Q
    |||||||||| |||||||| ||||||||| ||||||||||  ||  ||||||||||||||||||    
T  26830022 tattgttgttattgcttgtggttatttacatttggttattggtttccattgatacttgctccac 26829959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 237
Target Start/End: Original strand, 17758292 - 17758354
Alignment:
Q  175 attgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccac 237  Q
    ||||||||| |||||||  ||||||||| ||||||||||  ||| ||||||||||||||||||    
T  17758292 attgttgttattgcttgcggttatttacatttggttattggttgccattgatacttgctccac 17758354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 237
Target Start/End: Original strand, 17763259 - 17763321
Alignment:
Q  175 attgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccac 237  Q
    ||||||||| ||| ||||  |||||||| ||||||||||  ||||||||||||||||||||||    
T  17763259 attgttgttattgtttgtgattatttacatttggttattggttgtcattgatacttgctccac 17763321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 237
Target Start/End: Complemental strand, 22424724 - 22424662
Alignment:
Q  175 attgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccac 237  Q
    ||||||||||||| |||| ||||||||| ||||||||||  ||  ||||||||||||||||||    
T  22424724 attgttgttgttgtttgtggttatttacatttggttattggttaccattgatacttgctccac 22424662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 21356104 - 21356029
Alignment:
Q  22 atagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgt 99  Q
    |||||||||||||||| |   ||||||||||||| ||||||||  ||| |||||||||||| |||||||| |||||||    
T  21356104 atagtggattggagagctgc-tctctcctccagattaggtcata-ttggaccgaactgggtcaacaatcttttggtgt 21356029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 121; Significance: 7e-62; HSPs: 76)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 1 - 288
Target Start/End: Original strand, 2390364 - 2390668
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    ||||||||||| || ||||  |||||||||||||||||| ||||||||||||||||||||||| | ||| |||||||| |||||| ||||||||||||||    
T  2390364 tctctttgtaataactcatatatagtggattggagagatcaatctctcctccagagtaggtcaag-ttggaccgaactaggtgaataatctcttggtgtt 2390462  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgca--------ctagatt--------attgttgttg 184  Q
    ||||| ||||||||||||||||||||||||||||||| |||| ||| ||||||| ||||||||| ||        |||||||        |||||||||     
T  2390463 gttgtttatttttctctactctctttatcttgtttatccttttgttggattgtggttttgctatacatttgttttctagattagatctagattgttgtta 2390562  T
Q  185 ttgcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttggaattga--ccgaattca 282  Q
    ||| |||| ||||||||| ||||||||||  |||||||||||||||||||||| ||| ||||||||||| ||||||  |||||| ||||  |||||||||    
T  2390563 ttgattgtggttatttacatttggttattggttgtcattgatacttgctccactaatctaaatttcattgatgtgaggtttggatttgaatccgaattca 2390662  T
Q  283 caacaa 288  Q
    ||||||    
T  2390663 caacaa 2390668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 8359402 - 8359104
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||| || ||||||||||    
T  8359402 tctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactgggtgaac-atttcttggtgtt 8359304  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgca--------ctagatt--------attgttgttg 184  Q
    ||| ||   |||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||        |||||||        ||||||||||    
T  8359303 gttatc---ttttctctactctcattatcttgtttatcctttggttagattgtggttttgctatgcacttgttttctagattagatctagattgttgttg 8359207  T
Q  185 ttgcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttggaatt---gaccgaattc 281  Q
    ||||   |||| ||||||||||| || ||  ||| |||||||||||||||||||||| |||||||||||  |||||  |||||||||   ||||||||||    
T  8359206 ttgc---ttgtgatttacttttgattgttggttgccattgatacttgctccacgaatctaaatttcattggtgtgaggtttggaatttgagaccgaattc 8359110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 253
Target Start/End: Original strand, 3259077 - 3259340
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    ||||||||||| ||  ||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||| || || |||||||    
T  3259077 tctctttgtaaaaacccattgatagtggattggagagatcaatctctcctccagagtaggtca-agttgaaccgaactgggtgaac-atttcctggtgtt 3259174  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgc--------actagatt--------attgttgttg 184  Q
    ||| ||   |||||| ||||||||||||||||||||||| |||||| ||||||| |||||||||||         |||||||        |||||||||     
T  3259175 gttatc---ttttctttactctctttatcttgtttattccttggttggattgtggttttgctatgcccgtgttttctagattagatctagattgttgtta 3259271  T
Q  185 ttgcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcatt 253  Q
    |||||||| ||||||||| ||||||||||  |||||||||||||||||||| ||||| |||| ||||||    
T  3259272 ttgcttgtggttatttacatttggttattggttgtcattgatacttgctccccgaatctaaagttcatt 3259340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 5 - 169
Target Start/End: Complemental strand, 34310798 - 34310637
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgttgttg 104  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | ||| ||||||||||||||||||||| |||||||||||     
T  34310798 tttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct-ttggtgttgtta 34310700  T
Q  105 tctatttttctctactctctttatcttgtttatt-ctttggttagattgtgattttgctatgcact 169  Q
    ||   |||||| |||||||||||||||||||||| ||||||||  |||||| ||||||||||||||    
T  34310699 tc---ttttctttactctctttatcttgtttattcctttggttgaattgtggttttgctatgcact 34310637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 271
Target Start/End: Original strand, 29608819 - 29609094
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| ||||||||||||||||||||| || |||| ||||||||||||||||||  |||| ||||||||| |||||  || ||||||||||    
T  29608819 tctctttgtaagaactcattgatagtggattggagatatcaatcactcctccagagtaggtca-agttggaccgaactgagtgaa-tatttcttggtgtt 29608916  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgt-gattttgctatgcactagatt----------------attgttgtt 183  Q
    ||| ||   |||||||||||||||||||||||||||| ||||| ||||||||| | ||||| |||||||| | ||                |||||||||    
T  29608917 gttatc---ttttctctactctctttatcttgtttatcctttgcttagattgtggtttttgatatgcacttggtttctatattagatctagattgttgtt 29609013  T
Q  184 gttgcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttggaatt 271  Q
    ||||||||| ||||||||| |||||       |||||||||||||||||||||||||| ||||||||||||||||||  |||||||||    
T  29609014 gttgcttgtggttatttacatttgg-------ttgtcattgatacttgctccacgaatctaaatttcattaatgtgaggtttggaatt 29609094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 32358140 - 32357979
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||  |||| |||||||||||||||| || ||||||||||    
T  32358140 tctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtca-agttggaccgaactgggtgaac-atttcttggtgtt 32358043  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgca 167  Q
    ||| ||   |||||| ||||||||||| ||||||||||| ||| ||  |||||| ||||| ||||||    
T  32358042 gttatc---ttttctttactctctttaacttgtttattccttgcttgaattgtggttttgttatgca 32357979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 4508792 - 4508629
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| ||||||| |||||||||||||||| ||||||| || |||||||||| |  |||| |||||||||||||||| || ||||||||||    
T  4508792 tctctttgtaagaactcattgagagtggattggagagatcaatctcttcttcagagtaggtta-agttggaccgaactgggtgaac-atttcttggtgtt 4508695  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcact 169  Q
    ||| |    |||||| ||||||||||||||||||||| ||||||||  |||||| ||||||||||||||    
T  4508694 gttat---attttctttactctctttatcttgtttatcctttggttgaattgtggttttgctatgcact 4508629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 35853996 - 35854094
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgt 99  Q
    |||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||    
T  35853996 tctctttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgt 35854094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 48599420 - 48599250
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||| ||||  |||||||||||||||||||||||| |||||||||||||||| || |||  |||| |||||||||||||||| || ||||| ||||    
T  48599420 tctctttggaagagctcattgatagtggattggagagatcaatctctcctccagagcagatca-agttggaccgaactgggtgaac-atttcttgatgtt 48599323  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcactagattat 176  Q
    ||| ||   |||||| ||||||||||||||||||||||| |||||| ||||||  ||||||| |||||| ||||||    
T  48599322 gttatc---ttttctttactctctttatcttgtttattccttggttggattgtagttttgctgtgcacttgattat 48599250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 2 - 91
Target Start/End: Original strand, 23555123 - 23555212
Alignment:
Q  2 ctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  23555123 ctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 23555212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 16 - 169
Target Start/End: Complemental strand, 22328461 - 22328312
Alignment:
Q  16 tcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgttgttgtctatttttct 115  Q
    ||||| |||||||||| ||||||| ||||||||| | |||||||||||| |||| |||||||||||| || | | | ||||||||||| |||   |||||    
T  22328461 tcattaatagtggatttgagagatcaatctctcccctagagtaggtcattgttggaccgaactgggtaaatatttt-ttggtgttgttatct---tttct 22328366  T
Q  116 ctactctctttatcttgtttattctttggttagattgtgattttgctatgcact 169  Q
    ||||||||||||||||||||||||||| ||| ||||||| ||||| ||||||||    
T  22328365 ctactctctttatcttgtttattcttttgttcgattgtggttttgttatgcact 22328312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 22270055 - 22270151
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgt 99  Q
    |||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||||  |||| |||||||||||||||| ||||||||||||    
T  22270055 tctctttgtaagaactgattgatagtggattggagagatcaatctctcctccagagtaggtca-agttggaccgaactgggtgaac-atctcttggtgt 22270151  T

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Target: chr7; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 25767046 - 25766948
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgt 99  Q
    |||||||  ||||| |||||||||||||||||||||| | ||||||||||||||||||||||| | ||  |||||||||||||||||||||||||||||    
T  25767046 tctcttttgaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttagaccgaactgggtgaacaatctcttggtgt 25766948  T

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Target: chr7; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 29991135 - 29991225
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    ||||||| ||| || |||||||||||||||||||||||| ||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  29991135 tctctttctaataactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 29991225  T

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Target: chr7; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 5 - 91
Target Start/End: Original strand, 39731455 - 39731541
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  39731455 tttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 39731541  T

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Target: chr7; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 4510634 - 4510466
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    ||||||| |||||| ||||||||||||||||| ||| || ||||||||||  |||||||||||  |||| |||| ||||||||||| || ||||||||||    
T  4510634 tctctttataagaactcattgatagtggattgaagaaatcaatctctcctgtagagtaggtca-agttggaccgtactgggtgaac-atttcttggtgtt 4510537  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcactagatt 174  Q
    ||| ||   |||||| ||||||||| ||||||||||| | || |||  |||||| |||||||||||||| ||||    
T  4510536 gttatc---ttttctttactctcttgatcttgtttatccattagttgaattgtgtttttgctatgcacttgatt 4510466  T

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Target: chr7; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 4512476 - 4512308
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    ||||||| |||||| ||||||||||||||||| ||| || ||||||||||  |||||||||||  |||| |||| ||||||||||| || ||||||||||    
T  4512476 tctctttataagaactcattgatagtggattgaagaaatcaatctctcctgtagagtaggtca-agttggaccgtactgggtgaac-atttcttggtgtt 4512379  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcactagatt 174  Q
    ||| ||   |||||| ||||||||| ||||||||||| | || |||  |||||| |||||||||||||| ||||    
T  4512378 gttatc---ttttctttactctcttgatcttgtttatccattagttgaattgtgtttttgctatgcacttgatt 4512308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 19502260 - 19502350
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||| | ||| | |||| ||||||||||||||    
T  19502260 tctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaagtcaagtttggaacgaagtgggtgaacaatct 19502350  T

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Target: chr7; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 5 - 91
Target Start/End: Original strand, 25615939 - 25616025
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||| | ||| ||||||||||| |||||||||    
T  25615939 tttgtaagaactcattgatagtggattagagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggcgaacaatct 25616025  T

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Target: chr7; HSP #20
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 43504236 - 43504142
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgt 99  Q
    |||||||||| |||||||||||| ||||||||| | ||||||||||||| ||||||||| | ||| | |||||||||||||||||||||||||||    
T  43504236 tttgtaagaactcattgatagtgaattggagagttcaatctctcctccatagtaggtcaagtttggatcgaactgggtgaacaatctcttggtgt 43504142  T

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Target: chr7; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 48408901 - 48408984
Alignment:
Q  16 tcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgt 99  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||| | ||  ||||||||||||||||||| |||||||||    
T  48408901 tcattgatagtggattggagagtttaatctctcctccagagtatgtcaagtttagaccgaactgggtgaacaatttcttggtgt 48408984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 6360038 - 6359872
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| ||||||||||| |||||||||||| ||||||| | ||| | |||||||  |||| | |||||||||| |||||| ||||||||||    
T  6360038 tctctttgtaagaactcattgatagttgattggagagatcaatctcttccccatattaggtca-agttggatcgaactgggtcaacaatttcttggtgtt 6359940  T
Q  101 gttgtctatttttctctactctctttatcttgtttatt-ctttggttagattgtgattttgctatgcact 169  Q
    ||| ||  ||||  | | || ||||||||||||||||| |||  ||| ||||||| ||||||||||||||    
T  6359939 gttatc--ttttcatttgctttctttatcttgtttattccttaagttggattgtggttttgctatgcact 6359872  T

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Target: chr7; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 24789927 - 24790021
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgt 99  Q
    ||||||| || || |||||||||||||||||||    |||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||    
T  24789927 tttgtaaaaactctttgatagtggattggagagtactatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgt 24790021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 2361058 - 2360899
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| |||||||||||||||| |||| || ||||||||| ||||| |||||||  ||||||||||||||||| || || || ||||||      
T  2361058 tctctttgtaagaactcattgatagtggatttgagatatcaatctctcccccagattaggtca-agttgaaccgaactgggtcaataacct-ttggtg-- 2360963  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcact 169  Q
      ||||   |||||| || |||||||||||||||||||| ||||||  |||||| ||||| ||||||||    
T  2360962 --tgtc---ttttctttattctctttatcttgtttattccttggttgaattgtggttttgatatgcact 2360899  T

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Target: chr7; HSP #25
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 18388828 - 18388747
Alignment:
Q  19 ttgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||||||||   ||||||||||||||||||||||| | ||| |||||||||||||||||||||||| |||||    
T  18388828 ttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtt 18388747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 18392264 - 18392183
Alignment:
Q  19 ttgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||||||||   ||||||||||||||||||||||| | ||| |||||||||||||||||||||||| |||||    
T  18392264 ttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtt 18392183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 216 - 288
Target Start/End: Complemental strand, 22328254 - 22328182
Alignment:
Q  216 ttgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttggaattgaccgaattcacaacaa 288  Q
    |||||||| |||||| |||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||    
T  22328254 ttgtcattaatacttactccacgaatctaaatttcattgatgtgagatttggaattgaccgaattcacaacaa 22328182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 1560749 - 1560654
Alignment:
Q  5 tttgtaagaattcatt-gatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgt 99  Q
    |||||||||| ||||| |||||||||||||||||   ||||||||||||||||||||||| | ||| |||||||||||| | ||||||||||||||    
T  1560749 tttgtaagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtaaccaatctcttggtgt 1560654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 41317517 - 41317431
Alignment:
Q  4 ctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||| ||||| |||||||  |||| |||||||||||| ||||||||    
T  41317517 ctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattaggtca-agttggaccgaactgggtcaacaatct 41317431  T

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Target: chr7; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 6432053 - 6432134
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtg 83  Q
    |||||||||||||| || ||||||||||||||||||||| |||||||||| ||||||||||||  |||| |||||||||||||    
T  6432053 tctctttgtaagaactcgttgatagtggattggagagatcaatctctccttcagagtaggtca-agttggaccgaactgggtg 6432134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 14069919 - 14069830
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||| | ||| |||||||  |||| |||||||||||| ||||||||    
T  14069919 tctctttgtaagaactcattgatagtggattggagagatcaatctctccccaagattaggtca-agttggaccgaactgggtcaacaatct 14069830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 14379947 - 14379858
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||| | ||| |||||||  |||| |||||||||||| ||||||||    
T  14379947 tctctttgtaagaactcattgatagtggattggagagatcaatctctcccctagattaggtca-agttggaccgaactgggtcaacaatct 14379858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 20343982 - 20344071
Alignment:
Q  5 tttgtaagaattcatt-gatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctctt 94  Q
    |||||||||| ||||| |||||||||||||||||   |||||||||||||||||||||||  |||| ||||||||||||||||||||||||    
T  20343982 tttgtaagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtca-agttggaccgaactgggtgaacaatctctt 20344071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 27347899 - 27347988
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| ||||||||||||||||| |||||| ||||||||| ||||| |||||||  |||| |||||||||||| ||||||||    
T  27347899 tctctttgtaagaactcattgatagtggattgcagagatcaatctctcccccagattaggtca-agttggaccgaactgggtcaacaatct 27347988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 6592408 - 6592327
Alignment:
Q  19 ttgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||||||||   || |||||||||||||||||||| | ||| |||||||||||||||||||||||| |||||    
T  6592408 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtt 6592327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 6594626 - 6594545
Alignment:
Q  19 ttgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||||||||   || |||||||||||||||||||| | ||| |||||||||||||||||||||||| |||||    
T  6594626 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtt 6594545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 32060390 - 32060309
Alignment:
Q  19 ttgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||||||||   ||||||||||||||||||||||| | ||| |||||||| ||||||||||||||| |||||    
T  32060390 ttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaacttggtgaacaatctctttgtgtt 32060309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 41649094 - 41649008
Alignment:
Q  4 ctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||| ||| | |||||||  |||| |||||||||||| ||||||||    
T  41649094 ctttgtaagaactcattgatagtggattggagagatcaatctctcccccaaattaggtca-agttggaccgaactgggtcaacaatct 41649008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 8153424 - 8153513
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    ||||||||||| || |||||||||||||||||||||||| ||||||||| ||||| |||||||  |||| || ||||||||| ||||||||    
T  8153424 tctctttgtaataactcattgatagtggattggagagatcaatctctcccccagattaggtca-agttggactgaactgggtcaacaatct 8153513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 30024818 - 30024729
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| || ||||||||||||||||||||| |||| |||| |||||||||||||  |||| |||||||||| | ||||||||    
T  30024818 tctctttgtaagaactctttgatagtggattggagagatcaatcactcccccagagtaggtca-agttggaccgaactggatcaacaatct 30024729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 31733055 - 31732966
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| ||||||||| |||||||||||||| ||||||||| ||| | |||||||  |||| |||||||||||| ||||||||    
T  31733055 tctctttgtaagaactcattgatactggattggagagatcaatctctcccccaaattaggtca-agttggaccgaactgggtcaacaatct 31732966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 10 - 87
Target Start/End: Original strand, 18396409 - 18396486
Alignment:
Q  10 aagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaaca 87  Q
    |||||||||||||||| ||||||||||||| ||||||||||| |||||||||||  | || |||||||||||| ||||    
T  18396409 aagaattcattgatagaggattggagagatcaatctctcctcaagagtaggtcaatggtggaccgaactgggtaaaca 18396486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 4178856 - 4178945
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||| ||||| ||||||||||||||||| | || | |||||||||||||||| |||||| | ||||||| |||| ||||||||||||    
T  4178856 tctctttg-aagaactcattgatagtggattgaacagttcaatctctcctccagagcaggtcaagtttgaaccaaactaggtgaacaatct 4178945  T

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Target: chr7; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 18126726 - 18126815
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| ||||||||||||||||||||  || ||||||||| ||||| ||||||| | ||| ||||| |||||| ||||||||    
T  18126726 tctctttgtaagaactcattgatagtggattggaggaatcaatctctcccccagactaggtcaagtttg-accgacctgggtcaacaatct 18126815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 23565147 - 23565085
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtca 63  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||  | |||||||||||    
T  23565147 tctctttgtaagaactcattgatagtggattggagagatcaatctctctcctagagtaggtca 23565085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 24525588 - 24525526
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtca 63  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||| | ||| |||||||    
T  24525588 tctctttgtaagaactcattgatagtggattggagagatcaatctctccccaagattaggtca 24525526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 36146494 - 36146405
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| |||||||||||||||| ||||||| ||||||||| ||| | |||||||  |||| |||||||| ||| ||||||||    
T  36146494 tctctttgtaagaactcattgatagtggatttgagagatcaatctctcccccatattaggtca-agttggaccgaactaggtcaacaatct 36146405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 48489513 - 48489602
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||| || || ||||| |||||||||||||||||| ||||||||| ||||| |||||||  |||| |||||||||||| ||||||||    
T  48489513 tctctttgcaataactcattcatagtggattggagagatcaatctctcccccagattaggtca-agttggaccgaactgggtaaacaatct 48489602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 48491661 - 48491723
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtca 63  Q
    |||||||| ||||| |||||||||||||||||||||||| ||||||||| ||||| |||||||    
T  48491661 tctctttgaaagaactcattgatagtggattggagagatcaatctctcccccagattaggtca 48491723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 2759283 - 2759195
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatc 90  Q
    |||||||||||||| ||||||||||||||||||||| || ||||||| | ||||| |||||||  |||| |||||||| ||| |||||||    
T  2759283 tctctttgtaagaactcattgatagtggattggagatatcaatctcttccccagattaggtca-agttggaccgaacttggtcaacaatc 2759195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 4586243 - 4586291
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcc 49  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||    
T  4586243 tctctttgtaagaactcattgatagtggattggagagatcaatctctcc 4586291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 31518984 - 31519063
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctc-ctccagagtaggtcatggttgaaccgaactgg 80  Q
    |||||||||||||| ||||||| |||||||||||||||| |||||||| | |||||||||||||  |||| ||||||||||    
T  31518984 tctctttgtaagaactcattgacagtggattggagagatcaatctctctccccagagtaggtca-agttggaccgaactgg 31519063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 43864326 - 43864413
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaat 89  Q
    ||||||||||| || | |||||||||||||||||||||| ||||||||  ||||| |||||||  |||| |||||||||||| ||||||    
T  43864326 tctctttgtaaaaactaattgatagtggattggagagatcaatctctctcccagattaggtca-agttggaccgaactgggtcaacaat 43864413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 47674029 - 47673981
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcc 49  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||    
T  47674029 tctctttgtaagaactcattgatagtggattggagagatcaatctctcc 47673981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 38671305 - 38671219
Alignment:
Q  4 ctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    ||||||||||| ||||||||||||||||| |||||| ||||| ||| ||| | |||||||  |||| |||||||||||| ||||||||    
T  38671305 ctttgtaagaactcattgatagtggattgaagagataaatctatcccccaaaataggtca-agttggaccgaactgggtcaacaatct 38671219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 496069 - 496007
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtca 63  Q
    ||||||| |||||| |||||||||||||||||||||||| ||||||||| | | |||||||||    
T  496069 tctctttataagaactcattgatagtggattggagagatcaatctctcccctatagtaggtca 496007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 1113739 - 1113801
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtca 63  Q
    |||||||||||||| ||||||||||| |||||||||||| ||||||||| ||| | |||||||    
T  1113739 tctctttgtaagaactcattgatagtagattggagagatcaatctctcccccatattaggtca 1113801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 26417398 - 26417494
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgt 99  Q
    |||||||||||||| || ||||||||||||||||||||| ||||||||| ||||  |||||||   ||| ||| |||||||| |||||| |||||||||    
T  26417398 tctctttgtaagaactcgttgatagtggattggagagatcaatctctcc-ccaggttaggtca-aattggaccaaactgggtcaacaatttcttggtgt 26417494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 31105475 - 31105394
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaaca 87  Q
    |||||||||| |||||||| ||||||||||||||| ||||||||| | ||||||| |||  |||| |||||||||||| ||||    
T  31105475 tttgtaagaactcattgatggtggattggagagataaatctctccccaagagtagatca-agttggaccgaactgggtaaaca 31105394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 47676222 - 47676133
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| ||| |||||||||| ||||||||| ||||||||| ||| | |||||||  |||| |||||||||| | ||||||||    
T  47676222 tctctttgtaagaactcaatgatagtggaatggagagatcaatctctcccccatattaggtca-agttggaccgaactggatcaacaatct 47676133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 30814533 - 30814605
Alignment:
Q  16 tcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaat 89  Q
    |||||||||||||||||||||||| ||||||||| ||| | |||||||  |||| |||||||||||| ||||||    
T  30814533 tcattgatagtggattggagagatcaatctctcccccatattaggtca-agttggaccgaactgggtcaacaat 30814605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 174 - 237
Target Start/End: Complemental strand, 34310616 - 34310552
Alignment:
Q  174 tattgttgttgttgcttgttgt-tatttacttttggttattaattgtcattgatacttgctccac 237  Q
    |||||||||| |||||||| || ||||||| ||||||||||  ||||||||||||||||||||||    
T  34310616 tattgttgttattgcttgtggtctatttacatttggttattggttgtcattgatacttgctccac 34310552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 109 - 162
Target Start/End: Complemental strand, 1360155 - 1360102
Alignment:
Q  109 tttttctctactctctttatcttgtttattctttggttagattgtgattttgct 162  Q
    |||||||||| |||||||||||||||| |||||| ||| ||||||| |||||||    
T  1360155 tttttctctattctctttatcttgtttcttcttttgttcgattgtggttttgct 1360102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 26639425 - 26639486
Alignment:
Q  19 ttgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgg 80  Q
    |||||| |||||| ||||||| ||||||||||||| |||| ||||| |||| ||||||||||    
T  26639425 ttgataatggattagagagatcaatctctcctccatagtatgtcattgttgtaccgaactgg 26639486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 216 - 273
Target Start/End: Complemental strand, 48599196 - 48599139
Alignment:
Q  216 ttgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttggaattga 273  Q
    |||||||||||||||||||||||||| ||||||| ||| |||| || || ||||||||    
T  48599196 ttgtcattgatacttgctccacgaatctaaattttattgatgtaaagttcggaattga 48599139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 3904703 - 3904624
Alignment:
Q  1 tctctttgtaa-gaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgg 80  Q
    ||||||||||| ||| |||||||||||| ||  ||||||| |||||||||  ||||||||||||| |||| ||||||||||    
T  3904703 tctctttgtaaagaactcattgatagtg-atcagagagatcaatctctccctcagagtaggtcattgttggaccgaactgg 3904624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 237
Target Start/End: Complemental strand, 4510450 - 4510386
Alignment:
Q  174 tattgttgttgttgcttgttgtt-atttacttttggttattaattgtcattgatacttgctccac 237  Q
    |||||||||| |||||||| ||| |||||| ||||||||||  ||| ||||||||||||||||||    
T  4510450 tattgttgttattgcttgtggtttatttacatttggttattggttgccattgatacttgctccac 4510386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 237
Target Start/End: Complemental strand, 4512292 - 4512228
Alignment:
Q  174 tattgttgttgttgcttgttgtt-atttacttttggttattaattgtcattgatacttgctccac 237  Q
    |||||||||| |||||||| ||| |||||| ||||||||||  ||| ||||||||||||||||||    
T  4512292 tattgttgttattgcttgtggtttatttacatttggttattggttgccattgatacttgctccac 4512228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 12097931 - 12097864
Alignment:
Q  23 tagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    ||||||||||||||||| ||||||||| ||||| |||||||  |||| |||||||| ||| ||||||||    
T  12097931 tagtggattggagagatgaatctctcccccagattaggtca-agttggaccgaactaggtcaacaatct 12097864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 162
Target Start/End: Complemental strand, 14301437 - 14301390
Alignment:
Q  114 ctctactctctttatcttgtttattctttggttagattgtgattttgct 162  Q
    ||||||||||||||||||||| |||||||| || |||||||||||||||    
T  14301437 ctctactctctttatcttgtt-attctttgatttgattgtgattttgct 14301390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 154
Target Start/End: Complemental strand, 43363446 - 43363406
Alignment:
Q  114 ctctactctctttatcttgtttattctttggttagattgtg 154  Q
    |||||||||||||||||||||| |||||||||| |||||||    
T  43363446 ctctactctctttatcttgtttgttctttggttcgattgtg 43363406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 63
Target Start/End: Complemental strand, 4253605 - 4253552
Alignment:
Q  10 aagaattcattgatagtggattggagagattaatctctcctccagagtaggtca 63  Q
    ||||| ||||||||| |||||| ||||||| |||||||||  ||||||||||||    
T  4253605 aagaactcattgataatggattagagagatcaatctctcccacagagtaggtca 4253552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 5116686 - 5116735
Alignment:
Q  1 tctctttgtaa-gaattcattgatagtggattggagagattaatctctcc 49  Q
    ||||||||||| ||| |||||||||||| ||||||||||| |||||||||    
T  5116686 tctctttgtaaagaactcattgatagtgaattggagagataaatctctcc 5116735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 23344059 - 23344117
Alignment:
Q  3 tctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtca 63  Q
    ||||||| |||| ||||||||| | ||||||||| |||||||||||  |||||||||||||    
T  23344059 tctttgtgagaactcattgataatagattggagaaattaatctctc--ccagagtaggtca 23344117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 255 - 287
Target Start/End: Complemental strand, 6359773 - 6359741
Alignment:
Q  255 atgtgaaatttggaattgaccgaattcacaaca 287  Q
    ||||||| |||||||||||||||||||||||||    
T  6359773 atgtgaagtttggaattgaccgaattcacaaca 6359741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 237
Target Start/End: Complemental strand, 22552485 - 22552453
Alignment:
Q  205 ttggttattaattgtcattgatacttgctccac 237  Q
    |||||||||| ||||||||||||||||||||||    
T  22552485 ttggttattagttgtcattgatacttgctccac 22552453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 109; Significance: 1e-54; HSPs: 62)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 3 - 290
Target Start/End: Original strand, 3772276 - 3772574
Alignment:
Q  3 tctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgttgt 102  Q
    |||||||||||||| |||||||||||||||||||||| ||||| ||   |||||||||||| | ||| ||| |||||| | || | | |||||||| |||    
T  3772276 tctttgtaagaatttattgatagtggattggagagatcaatctatctctcagagtaggtcaag-ttggaccaaactggataaatatt-tcttggtggtgt 3772373  T
Q  103 tgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcactagatt----------------attgttgttgtt 186  Q
    | |||   |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||                ||||||||||||    
T  3772374 tatct---tttctctactctctttatcttgtttattctttggttagattgtggttttgctatgcacttgatttctagattaaatctagattgttgttgtt 3772470  T
Q  187 gcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttggaattgaccgaattcacaac 286  Q
    |||||| ||||||| |||||||| |||  ||| ||||||||| |||||||||||| ||||||||||| ||||||  ||||||||||||||||||||||||    
T  3772471 gcttgtggttattttcttttggtgattggttgccattgatacctgctccacgaatctaaatttcattgatgtgaggtttggaattgaccgaattcacaac 3772570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 1 - 288
Target Start/End: Original strand, 40221827 - 40222103
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| || ||||||||||||||||||||| ||||||||| ||||| |||||||  |||| |||||||||||| || ||||| ||||||||    
T  40221827 tctctttgtaagaactcgttgatagtggattggagagatcaatctctcccccagattaggtca-agttggaccgaactgggtcaataatct-ttggtgtt 40221924  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcactagattattgttgttgttgcttgttgtt-att 199  Q
    ||| ||   || ||| |||||||||||||||||| ||||||||||| ||||||| |||||||||||||       ||||||||| ||||||| ||| ||     
T  40221925 gttatc---ttgtctttactctctttatcttgttcattctttggttggattgtggttttgctatgcac-------ttgttgttgctgcttgtggttaatc 40222014  T
Q  200 tacttttggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttggaattgaccgaattcacaacaa 288  Q
     | |||||||| ||  ||| ||||||||||| |||||| ||| ||||||||||| ||||||| |||||||||  |||||||||||||||    
T  40222015 aatttttggttgttggttgccattgatactttctccacaaatctaaatttcattgatgtgaagtttggaatttgccgaattcacaacaa 40222103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 288
Target Start/End: Original strand, 40328862 - 40329159
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||     ||| || |||||| |||||| || ||||||||||    
T  40328862 tctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggt-----ttggacggaactgagtgaac-atttcttggtgtt 40328955  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgca--------ctagatt--------attgttgttg 184  Q
    ||| ||   |||||||||||||| || |||||||||| |||||||||||||||| ||||||||||||        |||||||        | |||||||     
T  40328956 gttatc---ttttctctactctccttttcttgtttatcctttggttagattgtggttttgctatgcacttgttttctagattagatctagactgttgtta 40329052  T
Q  185 ttgcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttggaatt---gaccgaattc 281  Q
    |||||||| ||||||||| ||||||| ||  ||||||||||||||||||| |||||| ||||||||||| ||||||  |||  ||||   ||||||||||    
T  40329053 ttgcttgtggttatttacatttggttgttggttgtcattgatacttgctctacgaatctaaatttcattgatgtgaggtttaaaatttgagaccgaattc 40329152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 110 - 207
Target Start/End: Complemental strand, 2999784 - 2999687
Alignment:
Q  110 ttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcactagattattgttgttgttgcttgttgttatttacttttg 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  2999784 ttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcacttgattattgttgttgttgcttgttgttattttcttttg 2999687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 4283606 - 4283769
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| |||||||||||||||||||||||| |||||| |||| |||||||||||  |||| |||||||||||||||| || ||||||||||    
T  4283606 tctctttgtaagaactcattgatagtggattggagagatcaatctcccctctagagtaggtca-agttggaccgaactgggtgaac-atttcttggtgtt 4283703  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcact 169  Q
    ||| ||   |||||| ||||||||||||||||||||| ||||||||  |||||| ||||||||||||||    
T  4283704 gttatc---ttttctttactctctttatcttgtttatcctttggttgaattgtggttttgctatgcact 4283769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 11384067 - 11384230
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    ||||||||||||||  |||||||| ||||||||||| ||  |||||||||||||||||||| |  |||| |||||||||||||||| || | ||||   |    
T  11384067 tctctttgtaagaacccattgatactggattggagacatcgatctctcctccagagtaggtta-agttggaccgaactgggtgaac-attttttgg---t 11384161  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcact 169  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  11384162 gttgtctatttttctttactctctttatcttgtttatcctttggttagattgtggttttgctatgcact 11384230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 42435077 - 42434906
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||  |||| |||||||||||||||| || ||||||||||    
T  42435077 tctctttgtaagaactcattgatagtggattggagaaatcaatctctcctccagagtaggtca-agttggaccgaactgggtgaac-atttcttggtgtt 42434980  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttg-gttagattgtgattttgctatgcactagattat 176  Q
    ||| ||   |||||| |||| |||||||||||||||||| |||  || ||||||| |||||||||||||| ||||||    
T  42434979 gttatc---ttttctttactttctttatcttgtttattccttgctttggattgtggttttgctatgcacttgattat 42434906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 10930285 - 10930120
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    ||||||||||||||  ||||||||||||||||||||||| ||||||||| ||||| |||||||  |||| |||||||||||| |||||| ||||||||||    
T  10930285 tctctttgtaagaacacattgatagtggattggagagatcaatctctcccccagattaggtca-agttggaccgaactgggtcaacaatttcttggtgtt 10930187  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcact 169  Q
    ||| ||  ||||  | | ||| |||||||||||||||||||| ||| ||||||| ||||||||||||||    
T  10930186 gttatc--ttttcttttgctccctttatcttgtttattcttttgttggattgtggttttgctatgcact 10930120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 18655482 - 18655648
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| |||||||||||||||| ||||||| ||||||||||||| |||||||||  |||| |||||||||||||||| || | ||||||||    
T  18655482 tctctttgtaagaactcattgatagtggattagagagatcaatctctcctccaaagtaggtca-agttggaccgaactgggtgaac-attttttggtgtt 18655579  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttg-gttagattgtgattttgctatgcact 169  Q
    ||| ||| || ||  || ||||||||||||||||||||| |||  || ||||||| ||||||||||||||    
T  18655580 gttatcttttctttact-ctctctttatcttgtttattccttgctttggattgtggttttgctatgcact 18655648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 42498278 - 42498366
Alignment:
Q  3 tctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  42498278 tctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 42498366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 34256593 - 34256503
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||| | ||| |||||||||||||||||||||    
T  34256593 tctctttgtaagaactcattgatagtggattggagagatcaatctctcctctagagtaggtcaagtttggaccgaactgggtgaacaatct 34256503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 7 - 99
Target Start/End: Original strand, 2627824 - 2627916
Alignment:
Q  7 tgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgt 99  Q
    |||||||| |||||||||||||||||||||| | ||||||||||||||||||||||| | ||| ||||||||||||||| |||||||||||||    
T  2627824 tgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaataatctcttggtgt 2627916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 17982735 - 17982825
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||| ||||| |||||||||||||||||||||| | ||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  17982735 tctctttggaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 17982825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 19945445 - 19945355
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||| ||||| |||||||||||||||||||||| | ||||||||||| ||||||||||| | |||||||||||||||||||||||||    
T  19945445 tctctttggaagaactcattgatagtggattggagagttcaatctctcctcgagagtaggtcaagtttgaaccgaactgggtgaacaatct 19945355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 34254417 - 34254327
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| | |||||||||||||||||||||| ||||||||||| ||||||||||| | ||| |||||||||||||||||||||    
T  34254417 tctctttgtaagaacttattgatagtggattggagagatcaatctctcctctagagtaggtcaagtttggaccgaactgggtgaacaatct 34254327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 31218339 - 31218429
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||| ||||| |||||||||||||||| ||||| | ||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  31218339 tctctttggaagaactcattgatagtggattagagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 31218429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 33352232 - 33352321
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||| ||||| |||||||  |||| |||||||||||| ||||||||    
T  33352232 tctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattaggtca-agttggaccgaactgggtcaacaatct 33352321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 43036505 - 43036594
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| |||||||||||||||| ||||||| ||||||||||||||| |||||||  |||| |||||||||||| ||||||||    
T  43036505 tctctttgtaagaactcattgatagtggatttgagagatcaatctctcctccagattaggtca-agttggaccgaactgggtcaacaatct 43036594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 44303937 - 44304027
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    ||||||| |||||| |||||||||||||||||||||| | ||||||||||||||||||||||| | ||| | |||||| ||||||||||||    
T  44303937 tctctttttaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggatcgaactaggtgaacaatct 44304027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 1746304 - 1746216
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatc 90  Q
    |||||||| ||||| |||||||||||||||||||||| | ||||||||||||| ||||||||| | ||| ||||||||||||||||||||    
T  1746304 tctctttg-aagaactcattgatagtggattggagagttcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatc 1746216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 3439589 - 3439678
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctctt 94  Q
    |||||||||| || |||||||||||||||||||   ||||||||||||||||||||||| | ||| |||||||||| |||||||||||||    
T  3439589 tttgtaagaactctttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactggatgaacaatctctt 3439678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 25690040 - 25690129
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctctt 94  Q
    |||||||||| || |||||||||||||||||||   || |||||||||||||||||||| | ||| ||||||||||||||||||||||||    
T  25690040 tttgtaagaactctttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctt 25690129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 3303756 - 3303667
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| ||||||||||||||||| |||||| ||||||||| ||| |||||||||  |||| |||||||||||| ||||||||    
T  3303756 tctctttgtaagaactcattgatagtggattgaagagatcaatctctcccccacagtaggtca-agttggaccgaactgggtaaacaatct 3303667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 4733788 - 4733873
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaaca 87  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||| ||||| |||||||  |||| |||||||||||| ||||    
T  4733788 tctctttgtaagaattcattgatagtggattggagagatcgatctctcccccagattaggtca-agttggaccgaactgggtcaaca 4733873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 5 - 91
Target Start/End: Complemental strand, 4743296 - 4743211
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||| |||||||||||||||||||||||| ||||||||| ||| |||||||||  |||| |||||||||||| ||||||||    
T  4743296 tttgtaagaactcattgatagtggattggagagatcaatctctcccccaaagtaggtca-agttggaccgaactgggtcaacaatct 4743211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 5689353 - 5689442
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||| ||||| | |||||  |||| |||||||||||| ||||||||    
T  5689353 tctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagatttggtca-agttggaccgaactgggtcaacaatct 5689442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 15212868 - 15212957
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| ||||||||| |||||||||||||| ||||||||| ||||| |||||||  |||| |||||||||||| ||||||||    
T  15212868 tctctttgtaagaactcattgataatggattggagagatcaatctctcccccagattaggtca-agttggaccgaactgggtcaacaatct 15212957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 12702720 - 12702631
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| ||||||||| |||||||||||||| ||||||||| | ||| |||||||  |||| |||||||||||| ||||||||    
T  12702720 tctctttgtaagaactcattgatattggattggagagatcaatctctcccctagattaggtca-agttggaccgaactgggtcaacaatct 12702631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 27811360 - 27811449
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    ||||||||||||||  |||||||||||||||| |||||| ||||||||| ||||| |||||||  |||| |||||||||||| ||||||||    
T  27811360 tctctttgtaagaacccattgatagtggattgaagagatcaatctctcccccagattaggtca-agttggaccgaactgggtcaacaatct 27811449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 30143422 - 30143511
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||| |||||  ||||||  ||||||| |||||| || ||||||||    
T  30143422 tctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagataaggtca-agttgaactgaactgagtcaacaatct 30143511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 40321162 - 40321251
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    ||||||||||| || || ||||||||||||||||||||| ||||||||| ||||| |||||||  |||| |||||||||||| ||||||||    
T  40321162 tctctttgtaaaaactctttgatagtggattggagagatcaatctctcccccagattaggtca-agttggaccgaactgggtcaacaatct 40321251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 42575392 - 42575311
Alignment:
Q  19 ttgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||||||||   || |||||||||||||||||||| | ||| |||||||||||||| ||||||||| |||||    
T  42575392 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtt 42575311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 7597696 - 7597776
Alignment:
Q  1 tctctttgtaa-gaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgg 80  Q
    ||||||||||| |||| ||||||||||||||||||||||| ||||||||| ||| |||||||||| |||  ||||||||||    
T  7597696 tctctttgtaaagaatgcattgatagtggattggagagatcaatctctcccccatagtaggtcattgttagaccgaactgg 7597776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 4731740 - 4731829
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| ||||||||||||||||||||||||  |||||||| ||||| | |||||  |||| |||||| ||||| ||||||||    
T  4731740 tctctttgtaagaactcattgatagtggattggagagatcgatctctcccccagattcggtca-agttggaccgaattgggtcaacaatct 4731829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 91
Target Start/End: Original strand, 6599058 - 6599143
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||| |||||||||||||||| ||||||| ||||||||| ||| | |||||||  |||| |||||||||||| ||||||||    
T  6599058 tttgtaagaactcattgatagtggattagagagatcaatctctcccccatattaggtca-agttggaccgaactgggtcaacaatct 6599143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 91
Target Start/End: Original strand, 6674511 - 6674596
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||| |||||||||||||||| ||||||| ||||||||| ||| | |||||||  |||| |||||||||||| ||||||||    
T  6674511 tttgtaagaactcattgatagtggattagagagatcaatctctcccccatattaggtca-agttggaccgaactgggtcaacaatct 6674596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 15290624 - 15290705
Alignment:
Q  19 ttgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||||||||   || |||||||||||||||||||| | ||| |||||||||||||  ||||||||| |||||    
T  15290624 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgtccaatctctttgtgtt 15290705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 15470993 - 15471074
Alignment:
Q  19 ttgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||||||||   || |||||||||||||||||||| | ||| |||||||||||||  ||||||||| |||||    
T  15470993 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgtccaatctctttgtgtt 15471074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 1292549 - 1292471
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactggg 81  Q
    |||||||||||||| |||||||||||||||| |||| || ||||||||| |||||||||||||  |||| |||||||||||    
T  1292549 tctctttgtaagaactcattgatagtggatttgagaaataaatctctcc-ccagagtaggtca-agttggaccgaactggg 1292471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 221 - 288
Target Start/End: Original strand, 10240423 - 10240489
Alignment:
Q  221 attgatacttgctccacgaatttaaatttcattaatgtgaaatttggaattgaccgaattcacaacaa 288  Q
    ||||||| ||||||||| |||||||||| |||| |||||||||||||| || ||||||||||||||||    
T  10240423 attgatatttgctccacaaatttaaattacattgatgtgaaatttggagtt-accgaattcacaacaa 10240489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 1345457 - 1345395
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtca 63  Q
    |||||||| ||||| ||||||||||||||||| |||| | ||||||||| |||||||||||||    
T  1345457 tctctttgaaagaactcattgatagtggattgaagagttcaatctctcccccagagtaggtca 1345395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 8965777 - 8965692
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaaca 87  Q
    |||||||||||||| |||||||||||| || |||||||| ||||||||| ||| | |||||||  |||| |||||||||||| ||||    
T  8965777 tctctttgtaagaactcattgatagtgcatcggagagataaatctctcccccatattaggtca-agttggaccgaactgggtaaaca 8965692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 19491785 - 19491688
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgt 99  Q
    |||||||||||||| || |||||||||||||  |||||| ||| ||||| ||| ||||||||||  ||| |||||||| ||| |||||| |||||||||    
T  19491785 tctctttgtaagaactcgttgatagtggattaaagagatcaatatctcccccatagtaggtcat-attggaccgaactaggtcaacaatatcttggtgt 19491688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 32902250 - 32902188
Alignment:
Q  10 aagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaac 72  Q
    |||||||||||||||||| ||| ||||||| ||||||||| || ||||||||||| |||||||    
T  32902250 aagaattcattgatagtgaatttgagagatcaatctctccccctgagtaggtcattgttgaac 32902188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 9765827 - 9765914
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatc 90  Q
    |||||||||||||| ||||||||||||||||||||||  |  ||||||| ||||| ||||||||  ||| |||||||||||| |||||||    
T  9765827 tctctttgtaagaactcattgatagtggattggagag-ctgctctctcccccagattaggtcat-attggaccgaactgggtcaacaatc 9765914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 159
Target Start/End: Original strand, 11137213 - 11137262
Alignment:
Q  110 ttttctctactctctttatcttgtttattctttggttagattgtgatttt 159  Q
    |||||||||||||||||||||||||||||| |||||| ||||||| ||||    
T  11137213 ttttctctactctctttatcttgtttattcattggttcgattgtggtttt 11137262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 30291692 - 30291737
Alignment:
Q  4 ctttgtaagaattcattgatagtggattggagagattaatctctcc 49  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||    
T  30291692 ctttgtaagaattctttgatagtggattggagagatcaatctctcc 30291737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 8153842 - 8153902
Alignment:
Q  3 tctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtca 63  Q
    |||||||||||| ||||||||||| |||||||||||| ||||||| |  ||||||||||||    
T  8153842 tctttgtaagaactcattgatagttgattggagagatcaatctcttcctcagagtaggtca 8153902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 115 - 159
Target Start/End: Complemental strand, 9633590 - 9633546
Alignment:
Q  115 tctactctctttatcttgtttattctttggttagattgtgatttt 159  Q
    ||||||||||||||||||||||||||||||||  |||||||||||    
T  9633590 tctactctctttatcttgtttattctttggttcaattgtgatttt 9633546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 18141905 - 18141964
Alignment:
Q  4 ctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtca 63  Q
    ||||||||||| || ||||||||||||||||||||| ||||||||| | ||| |||||||    
T  18141905 ctttgtaagaactctttgatagtggattggagagatcaatctctcccctagattaggtca 18141964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 237
Target Start/End: Original strand, 18655669 - 18655732
Alignment:
Q  174 tattgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccac 237  Q
    |||||||||| ||||||||  |||||||| ||||||||||  |||||||||||| |||||||||    
T  18655669 tattgttgttattgcttgtgtttatttacatttggttattggttgtcattgatatttgctccac 18655732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 41366697 - 41366612
Alignment:
Q  4 ctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    ||||||||||| ||||| |||||||||||||||||| ||||||||| | ||| |||||||  |||| |||||||||||  ||||||||    
T  41366697 ctttgtaagaactcatttatagtggattggagagatcaatctctcc-ctagattaggtca-agttggaccgaactgggacaacaatct 41366612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 3073959 - 3073898
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtca 63  Q
    |||||||||||||| ||||||||| ||| |||||||||| ||||||||| ||| |||||||||    
T  3073959 tctctttgtaagaactcattgataatggcttggagagatcaatctctcc-ccatagtaggtca 3073898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 4162579 - 4162640
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtca 63  Q
    |||||||||||||| |||||||||| |||||||||| || ||||||||| | |||||||||||    
T  4162579 tctctttgtaagaactcattgatag-ggattggagatatcaatctctccccaagagtaggtca 4162640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 10015177 - 10015241
Alignment:
Q  16 tcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggt 82  Q
    |||||||||||||||||||||||| ||||||| ||||| |||||||||  |||| ||||||||||||    
T  10015177 tcattgatagtggattggagagataaatctct-ctccatagtaggtca-agttggaccgaactgggt 10015241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 10929871 - 10929907
Alignment:
Q  2 ctctttgtaagaattcattgatagtggattggagaga 38  Q
    ||||||||||||| |||||||||||||||||||||||    
T  10929871 ctctttgtaagaactcattgatagtggattggagaga 10929907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 44353875 - 44353923
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcc 49  Q
    |||||||||||||| ||||||||||||||||| | |||| |||||||||    
T  44353875 tctctttgtaagaactcattgatagtggattgaaaagatcaatctctcc 44353923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 225 - 284
Target Start/End: Original strand, 15691105 - 15691163
Alignment:
Q  225 atacttgctccacgaatttaaatttcattaatgtgaaatttggaattgaccgaattcaca 284  Q
    ||||||||||||||||| ||||||||||| ||||||  |||||| || ||||||||||||    
T  15691105 atacttgctccacgaatctaaatttcattgatgtgaggtttggagtt-accgaattcaca 15691163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 29796391 - 29796320
Alignment:
Q  16 tcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaaca 87  Q
    ||||| ||| |||||||||||||| ||||||||| |||  ||||||||| |||| |||||||| ||| ||||    
T  29796391 tcatttataatggattggagagatcaatctctcccccaatgtaggtcattgttggaccgaacttggtaaaca 29796320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 11712071 - 11712018
Alignment:
Q  16 tcattgatagtggattggagagattaatctctcctccagagtaggtcatggttg 69  Q
    ||||||||||||||||| |||||| |||||||||  || |||||||||| ||||    
T  11712071 tcattgatagtggattgaagagatcaatctctccctcaaagtaggtcattgttg 11712018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 18106161 - 18106087
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggt 82  Q
    |||||||||| ||||||||||| | |||||||||| ||||||||| ||||| |||||||  |||| ||||||||||||    
T  18106161 tttgtaagaactcattgatagt-gtttggagagatcaatctctcc-ccagaataggtca-agttggaccgaactgggt 18106087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 78
Target Start/End: Original strand, 38863949 - 38864017
Alignment:
Q  10 aagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaact 78  Q
    ||||| || ||||||||||||||||||||| |||||| ||| || ||||||| || |||  ||||||||    
T  38863949 aagaactcgttgatagtggattggagagatcaatctcccctgcatagtaggttattgttagaccgaact 38864017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 102; Significance: 2e-50; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 288
Target Start/End: Original strand, 10571 - 10870
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| || |||||||||||||| |||||| |||||||||||||||||||||||  |||| |||||||||||| ||| || ||||||||||    
T  10571 tctctttgtaagaactcgttgatagtggattgaagagatcaatctctcctccagagtaggtca-agttggaccgaactgggtaaac-atttcttggtgtt 10668  T
Q  101 gttgtctatttttctctactctc-tttatcttgtttattctttggttagattgtgattttgctatgcactagatt----------------attgttgtt 183  Q
    ||| ||   ||| |||||||||| |||||||||||||||||||| |||||||||  |||| |||| |||| ||||                |||||||||    
T  10669 gttatc---tttcctctactctcttttatcttgtttattctttgattagattgtagttttactatacacttgatttctagattaaatctagattgttgtt 10765  T
Q  184 gttgcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttggaattgaccgaattcac 283  Q
    ||||||||| ||||||| |||||||||||   ||||||||||||||| |||||| ||| ||||||||||| ||||||  |||| ||||||||||||||||    
T  10766 gttgcttgtggttattttcttttggttatcggttgtcattgatactttctccacaaatctaaatttcattgatgtgaggtttgaaattgaccgaattcac 10865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 95; Significance: 2e-46; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 10 - 287
Target Start/End: Original strand, 33648263 - 33648548
Alignment:
Q  10 aagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgttgttgtctat 109  Q
    ||||| |||||||||| ||||||||||||| |||||||||||||||||||||||| |||| |||||||||||| ||| || | ||||||||||||||       
T  33648263 aagaactcattgatagcggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactgggtaaac-atttattggtgttgttgtc--- 33648358  T
Q  110 ttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcac--------tagatt--------attgttgttgttgcttgtt 193  Q
    ||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||        ||||||        ||||||||||||||| ||     
T  33648359 ttttctctactctctttatcttgtttattctttagtttaattgtgattttgctatgcacttggcttatagattaggcctagattgttgttgttgctcgta 33648458  T
Q  194 gttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttgga-attgaccgaattcacaaca 287  Q
    ||||     |||| ||||||  ||||||||||| ||| |||||||||| ||||||||||| || ||| |||||||  ||||||||||||||||||    
T  33648459 gtta-----tttttgttattggttgtcattgattcttactccacgaatctaaatttcattgatatgagatttggattttgaccgaattcacaaca 33648548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 35446970 - 35446800
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||  |||| |||||||||||||||| || ||||||||||    
T  35446970 tctctttgtaagaactcattgatagtggattggagagatcactctctcctccagagtaggtca-agttggaccgaactgggtgaac-atttcttggtgtt 35446873  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcactagattat 176  Q
    ||| ||   |||||| ||||||||||||||||||||| ||||||||  |||||| |||||||||||||| ||||||    
T  35446872 gttatc---ttttctttactctctttatcttgtttatgctttggttgaattgtggttttgctatgcacttgattat 35446800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 24398139 - 24398307
Alignment:
Q  1 tctctttgtaa-gaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgt 99  Q
    ||||||||||| ||| ||||||||| |||||||||||||| ||||||||| ||| |||||||||| |||| |||||||||| ||||||||  ||||||||    
T  24398139 tctctttgtaaagaactcattgataatggattggagagatcaatctctcccccatagtaggtcattgttggaccgaactggctgaacaattacttggtgt 24398238  T
Q  100 tgttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcact 169  Q
    |||| |||||||||||||||||||||||||||||||| || |||||  ||||| | ||||||||||||||    
T  24398239 tgttatctatttttctctactctctttatcttgtttagtc-ttggtccgattgcggttttgctatgcact 24398307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 45727011 - 45727172
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||  |||| |||||||||||||||| || | || |||||    
T  45727011 tctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtca-agttggaccgaactgggtgaac-attttttagtgtt 45727108  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcact 169  Q
    ||| ||   |||||| ||||||||||||||  |||||||||||||| ||||||| ||||||||||||||    
T  45727109 gttatc---ttttctttactctctttatct--tttattctttggttggattgtggttttgctatgcact 45727172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 288
Target Start/End: Original strand, 7451200 - 7451501
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    ||||||||||| || ||||||||||||||||| |||||| ||||||||||| | ||||||||| | | ||  |||||||||||||| || | ||||   |    
T  7451200 tctctttgtaataactcattgatagtggattgcagagatcaatctctcctctacagtaggtcaagttgga--cgaactgggtgaac-atttattgg---t 7451293  T
Q  101 gttgtctatttttctcta--ctctctttatcttgtttattctttggttagattgtgattttgctatgca--------ctagatt--------attgttgt 182  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||| ||||||| ||||| ||||||        |||||||        ||||||||    
T  7451294 gttgtctatttttctctactctctctttatcttgtttattctttggttcgattgtggttttgttatgcacttgttttctagattagatctagattgttgt 7451393  T
Q  183 tgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttggaattga--ccgaatt 280  Q
    | |||||||| |||||| ||    |||||||  |||||||||| ||||||||||||||| ||||||||||| |||||| ||||||| ||||  |||||||    
T  7451394 tattgcttgtggttattgacaagaggttattggttgtcattgaaacttgctccacgaatctaaatttcattgatgtgagatttggatttgagtccgaatt 7451493  T
Q  281 cacaacaa 288  Q
    ||||||||    
T  7451494 cacaacaa 7451501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 16 - 169
Target Start/End: Original strand, 17450675 - 17450822
Alignment:
Q  16 tcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgttgttgtctatttttct 115  Q
    |||||||||||||||||||||||| ||||||||| | ||||||||||| | ||| |||||||| |||||||||||| ||||||||||| |||   |||||    
T  17450675 tcattgatagtggattggagagatcaatctctccac-agagtaggtcaag-ttggaccgaactaggtgaacaatct-ttggtgttgttatct---tttct 17450768  T
Q  116 ctactctctttatcttgtttattctttggttagattgtgattttgctatgcact 169  Q
     ||||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  17450769 gtactctctttatcttgtttatcctttggttagattgtggttttgctatgcact 17450822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 36988162 - 36988072
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  36988162 tctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 36988072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 2334504 - 2334414
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | ||| ||||||||||| |||||||||    
T  2334504 tctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggggaacaatct 2334414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 5723342 - 5723252
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||| | | ||| |||||||||||||||||||||    
T  5723342 tctctttgtaagaactcattgatagtggattggagagatcaatctctcctctagagtaggttaagtttggaccgaactgggtgaacaatct 5723252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 6266777 - 6266871
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgt 99  Q
    |||||||||| || |||||||||||||||||||   ||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||    
T  6266777 tttgtaagaactctttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgt 6266871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 6595092 - 6595002
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||| | ||| ||||||||| |||||||||||    
T  6595092 tctctttgtaagaactcgttgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgagtgaacaatct 6595002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 1631818 - 1631651
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||  |||| ||||||||| |||||  || |||| |||||    
T  1631818 tctctttgtaagaactcattgatagtggattggagaaatcaatctctcctccagagtaggtca-agttggaccgaactgagtgaa-tatttcttagtgtt 1631721  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcactagatta 175  Q
    ||| ||   |||||  | ||||||||||||||||||||| ||  || ||||||| ||||||||| |||| |||||    
T  1631720 gttatc---ttttccttgctctctttatcttgtttattcctt--ttggattgtggttttgctatacacttgatta 1631651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 3 - 169
Target Start/End: Complemental strand, 42288194 - 42288033
Alignment:
Q  3 tctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgttgt 102  Q
    |||||||||||  ||||||||| |||||||||||||| ||||||||| ||||| ||||||| | ||| |||||||||||| || ||| |||||||| |||    
T  42288194 tctttgtaagagctcattgataatggattggagagatcaatctctcc-ccagattaggtcaag-ttggaccgaactgggtcaataatttcttggtgctgt 42288097  T
Q  103 tgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcact 169  Q
    | |||   ||||| ||| ||||||| ||||||||||| |||||| ||||||| |||| |||||||||    
T  42288096 tatct---tttctttaccctctttaacttgtttattccttggttggattgtggtttttctatgcact 42288033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 5 - 91
Target Start/End: Complemental strand, 4484412 - 4484326
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||| | ||| || ||||||||||||||||||    
T  4484412 tttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggacagaactgggtgaacaatct 4484326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 4503218 - 4503129
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||| ||||| |||||||||||||||||||||| | ||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  4503218 tctctttg-aagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 4503129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 5 - 91
Target Start/End: Original strand, 30833432 - 30833518
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||| | ||| || ||||||||||||||||||    
T  30833432 tttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggactgaactgggtgaacaatct 30833518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 45099837 - 45099926
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||| ||||| |||||||||||||||||||||| | ||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  45099837 tctctttg-aagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 45099926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 32289650 - 32289739
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctctt 94  Q
    |||||||||| |||||||||||  ||| ||||||| ||||||||||||||||||||||| | ||| ||||||||||||||||||||||||    
T  32289650 tttgtaagaactcattgatagtaaattagagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctt 32289739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 17057455 - 17057366
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||| ||||| |||||||  |||| |||||||||||| ||||||||    
T  17057455 tctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagactaggtca-agttggaccgaactgggtcaacaatct 17057366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 17085438 - 17085349
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||| ||||| |||||||  |||| |||||||||||| ||||||||    
T  17085438 tctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagactaggtca-agttggaccgaactgggtcaacaatct 17085349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 12647454 - 12647373
Alignment:
Q  19 ttgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||||||||   ||||||||||||||||||||||| | ||| |||||||||||||||||||||||| |||||    
T  12647454 ttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtt 12647373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 723827 - 723741
Alignment:
Q  4 ctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||| ||||| |||||||  |||| |||||||||||| ||||||||    
T  723827 ctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattaggtca-agttggaccgaactgggtcaacaatct 723741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 13656115 - 13656025
Alignment:
Q  5 tttgtaagaattcatt-gatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctctt 94  Q
    |||||||||| ||||| |||||||||||||||||   ||||||||||||||||||||||| | ||| |||||||||||||| |||||||||    
T  13656115 tttgtaagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctt 13656025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 5 - 91
Target Start/End: Complemental strand, 34139852 - 34139767
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||| |||||||||||||||||||||||| ||||||||| ||||| |||||||  |||| |||||||||||| ||||||||    
T  34139852 tttgtaagaactcattgatagtggattggagagatcaatctctcccccagattaggtca-agttggaccgaactgggtcaacaatct 34139767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 36318095 - 36318006
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||   |||||||||||  |||| |||||||||||| ||||||||    
T  36318095 tctctttgtaagaactcattgatagtggattggagagatcaatctctcccttagagtaggtca-agttggaccgaactgggtcaacaatct 36318006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 30218131 - 30217982
Alignment:
Q  1 tctctttgtaag-aattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgt 99  Q
    |||||||||||  |||||||||||||||| ||| | |||| |||| |||| |||||||| ||||| |||| || ||||| ||| |||| | | |||||||    
T  30218131 tctctttgtaaataattcattgatagtgggttgaaaagatcaatcactcccccagagtaagtcattgttggactgaactcggtaaacatttt-ttggtgt 30218033  T
Q  100 tgttgtctatttttctctactctctttatcttgtttattctttggttagattgtg 154  Q
     |    || |||||||||||||||||||||||||||||||||||||| |||||||    
T  30218032 ag----ctctttttctctactctctttatcttgtttattctttggtttgattgtg 30217982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 176 - 288
Target Start/End: Original strand, 24398349 - 24398457
Alignment:
Q  176 ttgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttggaattgacc 275  Q
    ||||||||| ||||||| |||||||    || ||||||  ||||||||||||||||||| |||||| |||||||||||||||||   |||||||||||||    
T  24398349 ttgttgttgctgcttgtggttattt----tttgttattggttgtcattgatacttgctctacgaatctaaatttcattaatgtgcggtttggaattgacc 24398444  T
Q  276 gaattcacaacaa 288  Q
    ||| | |||||||    
T  24398445 gaagttacaacaa 24398457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 36205750 - 36205661
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||| ||||| ||||||| || ||||||||||| | ||||| ||||||||||||||||| | ||| |||||||||||||||||||||    
T  36205750 tctctttg-aagaactcattgacagcggattggagagttcaatctatcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 36205661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 36773644 - 36773733
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| || ||||||||||||||||||||| ||||||||| ||||| || ||||  |||| |||||||||||| ||||||||    
T  36773644 tctctttgtaagaactctttgatagtggattggagagatcaatctctcccccagattatgtca-agttggaccgaactgggtcaacaatct 36773733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 38312322 - 38312411
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||  |||||||||||||||||||||||| ||||||||| ||||| || ||||  |||| |||||||||||| ||||||||    
T  38312322 tctctttgtaagatctcattgatagtggattggagagatcaatctctcccccagattatgtca-agttggaccgaactgggtcaacaatct 38312411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 39284933 - 39285007
Alignment:
Q  16 tcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||||||||||||| ||||||||| ||||| |||||||  |||| |||||||||||| ||||||||    
T  39284933 tcattgatagtggattggagagatcaatctctcccccagattaggtca-agttggaccgaactgggtcaacaatct 39285007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 91
Target Start/End: Complemental strand, 14633907 - 14633822
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||| |||| ||||||||||||||||||| ||||||||| ||||| |||||||  |||| ||||||||| || ||||||||    
T  14633907 tttgtaagaactcatagatagtggattggagagatcaatctctcccccagattaggtca-agttggaccgaactgagtcaacaatct 14633822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 76
Target Start/End: Original strand, 28672022 - 28672088
Alignment:
Q  10 aagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaa 76  Q
    ||||| ||| ||| |||||||||||||||| |||||||||||||||||||||||| |||| ||||||    
T  28672022 aagaactcactgacagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaa 28672088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 29867951 - 29868040
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| || ||||||||||||||||||||| ||||||||| ||| | |||||||  |||| |||||||||||| || |||||    
T  29867951 tctctttgtaagaactctttgatagtggattggagagatcaatctctcccccaaattaggtca-agttggaccgaactgggtcaataatct 29868040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 17490233 - 17490172
Alignment:
Q  2 ctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtca 63  Q
    ||||||||||||| ||||||||||||||||| |||||| ||||||||| | |||||||||||    
T  17490233 ctctttgtaagaactcattgatagtggattgtagagatcaatctctcccctagagtaggtca 17490172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 7815359 - 7815311
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcc 49  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  7815359 tctctttgtaagaactcatttatagtggattggagagattaatctctcc 7815311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 11151674 - 11151588
Alignment:
Q  4 ctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    ||||||||||| || | ||||||||||||||||||| || |||||| ||||| |||||||  |||| |||||||||||| ||||||||    
T  11151674 ctttgtaagaactcttagatagtggattggagagatcaacctctcccccagattaggtca-agttggaccgaactgggtcaacaatct 11151588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 42362437 - 42362496
Alignment:
Q  4 ctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtca 63  Q
    ||||||||||| ||||||||||||||||||||||||  |||||||| ||||| |||||||    
T  42362437 ctttgtaagaactcattgatagtggattggagagatctatctctcccccagattaggtca 42362496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 11067387 - 11067476
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| ||||| ||| ||||||| |||||| ||||||||| ||||| |||||||  |||| |||||||| ||| ||||||||    
T  11067387 tctctttgtaagaactcatttataatggattgaagagatcaatctctcccccagattaggtca-agttggaccgaactcggtcaacaatct 11067476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 33162536 - 33162447
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    ||||| |||||||| |||||||||||||||| ||||||| ||||||||| | ||| |||||||  |||| |||||||| ||| ||||||||    
T  33162536 tctctctgtaagaactcattgatagtggattagagagatcaatctctcccctagattaggtca-agttggaccgaactaggtcaacaatct 33162447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 174 - 237
Target Start/End: Original strand, 45727193 - 45727257
Alignment:
Q  174 tattgttgttgttgcttgttgtt-atttacttttggttattaattgtcattgatacttgctccac 237  Q
    |||| |||||||||||||| ||| |||||| ||||||||||| ||| ||||||||||||||||||    
T  45727193 tattattgttgttgcttgtggtttatttacatttggttattagttgccattgatacttgctccac 45727257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 175 - 287
Target Start/End: Original strand, 17450844 - 17450956
Alignment:
Q  175 attgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttggaatt--- 271  Q
    ||||||||||||||||||    |||||| |||||||||   |||||||||||||||||  ||||||| |||||||||||  |||||  ||| |||||       
T  17450844 attgttgttgttgcttgtg---atttacatttggttatcggttgtcattgatacttgcgtcacgaatctaaatttcattggtgtgaggtttagaatttga 17450940  T
Q  272 gaccgaattcacaaca 287  Q
    ||||||||||||||||    
T  17450941 gaccgaattcacaaca 17450956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 14202495 - 14202450
Alignment:
Q  4 ctttgtaagaattcattgatagtggattggagagattaatctctcc 49  Q
    ||||||||||| ||||||||||| |||||||||||| |||||||||    
T  14202495 ctttgtaagaactcattgatagtagattggagagatcaatctctcc 14202450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 42412117 - 42412161
Alignment:
Q  18 attgatagtggattggagagattaatctctcctccagagtaggtca 63  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||    
T  42412117 attgatagtggattggagagatcaatctctcc-ccagagtaggtca 42412161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 4 - 91
Target Start/End: Original strand, 11690586 - 11690672
Alignment:
Q  4 ctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    ||||||||||| || ||||||||||||||||||||| || |||||| ||| | || ||||  |||| |||||||||| | ||||||||    
T  11690586 ctttgtaagaaatcgttgatagtggattggagagatcaacctctcccccatattacgtca-agttggaccgaactggatcaacaatct 11690672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 11049636 - 11049698
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtca 63  Q
    |||||||||||||| ||||||||||| ||||| | |||| |||||||||| || | |||||||    
T  11049636 tctctttgtaagaactcattgatagtagattgaaaagatcaatctctccttcataataggtca 11049698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 26353270 - 26353328
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtca 63  Q
    |||||||| | |||||||||||||||||||||||| | |||||||   |||||||||||    
T  26353270 tttgtaagtactcattgatagtggattggagagatcactctctcccttagagtaggtca 26353328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 2838079 - 2838135
Alignment:
Q  43 tctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    ||||||| ||||||||||||||  ||| |||||||||||| |||||| ||||||||||    
T  2838079 tctctcccccagagtaggtcata-ttggaccgaactgggtcaacaatttcttggtgtt 2838135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 43 - 99
Target Start/End: Original strand, 1345590 - 1345645
Alignment:
Q  43 tctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgt 99  Q
    ||||||| ||||||||||||||  ||| |||||||||||| |||||| |||||||||    
T  1345590 tctctcccccagagtaggtcata-ttggaccgaactgggtcaacaatttcttggtgt 1345645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 13121849 - 13121901
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctcca 53  Q
    ||||||||||  || ||||||||||||||||| ||| || |||||||||||||    
T  13121849 tctctttgtagaaactcattgatagtggattgaagaaatcaatctctcctcca 13121901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 93; Significance: 4e-45; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 285
Target Start/End: Complemental strand, 27637698 - 27637403
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| ||||| |||||||||||||||||| |||||||||| ||||||||||||| |||| |||||||||||||||  || ||||||||||    
T  27637698 tctctttgtaagaactcatt-atagtggattggagagatcaatctctcctgcagagtaggtcattgttggaccgaactgggtgaa-tatttcttggtgtt 27637601  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcactagat----------------tattgttgttg 184  Q
    ||| ||   |||||| ||||||||||||||||||||||| || ||| ||||||| |||||||||||||| | |                |||||||||||    
T  27637600 gttatc---ttttctttactctctttatcttgtttattccttagttggattgtggttttgctatgcacttggtttatagactaggtctatattgttgttg 27637504  T
Q  185 ttgcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttggaatt---gaccgaattc 281  Q
    ||||   |||| |||||||||||||| || |||  |||| ||||||||||||||||||||||||||||| ||||||  |||| ||||   ||||||||||    
T  27637503 ttgc---ttgtgatttacttttggttgttgattaccattaatacttgctccacgaatttaaatttcattgatgtgaggtttgaaatttgagaccgaattc 27637407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 5058127 - 5058298
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||  |||| |||||||||||||||| || ||||||||||    
T  5058127 tctctttgtaagaactcattgatagtggattggagagatcaatctctcctctagagtaggtca-agttggaccgaactgggtgaac-atttcttggtgtt 5058224  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttg-gttagattgtgattttgctatgcactagattat 176  Q
    ||| ||   |||||| ||||||||||||||||||||||| |||  || |||| || |||| ||||||||| ||||||    
T  5058225 gttatc---ttttctttactctctttatcttgtttattccttgctttggattatggttttactatgcacttgattat 5058298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 213547 - 213714
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||| | ||| |||||||||||||||| || ||||||||||    
T  213547 tctctttgtaagaactcattgatagtggattggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaac-atttcttggtgtt 213645  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttg-gttagattgtgattttgctatgcact 169  Q
    ||| ||| |  ||  || ||||||||||||||||||||| |||  || ||||||| ||||||||||||||    
T  213646 gttatctttcctttact-ctctctttatcttgtttattccttgcttttgattgtggttttgctatgcact 213714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 40147343 - 40147506
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||  |||| |||||||||||||||| || | || |||||    
T  40147343 tctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtca-agttggaccgaactgggtgaac-atttttttgtgtt 40147440  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcact 169  Q
     || ||   |||||| |||||| |||||||||||||| ||||||||  |||||| ||||| ||||||||    
T  40147441 tttatc---ttttctttactctatttatcttgtttatcctttggttgaattgtggttttgttatgcact 40147506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 37439223 - 37439313
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  37439223 tctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 37439313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 25412842 - 25412932
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | ||| || ||||||||||||||||||    
T  25412842 tctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggactgaactgggtgaacaatct 25412932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 9789306 - 9789217
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctctt 94  Q
    |||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||| | ||| ||||||||||||||||||||||||    
T  9789306 tttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctt 9789217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 16409561 - 16409650
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctctt 94  Q
    |||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||| | ||| ||||||||||||||||||||||||    
T  16409561 tttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctt 16409650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 26170848 - 26170937
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctctt 94  Q
    |||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||| | ||| ||||||||||||||||||||||||    
T  26170848 tttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctt 26170937  T

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Target: chr5; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 26177968 - 26178057
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctctt 94  Q
    |||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||| | ||| ||||||||||||||||||||||||    
T  26177968 tttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctt 26178057  T

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Target: chr5; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 27015605 - 27015774
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| ||||||||||||||||| | |||| ||||||||||||| | |||||||  |||| |||||||||||||||| || | |||||| |    
T  27015605 tctctttgtaagaactcattgatagtggattgtacagatcaatctctcctccaaaataggtca-agttggaccgaactgggtgaac-attttttggtg-t 27015701  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcactagattat 176  Q
    ||| |   ||||||| ||||||||||||||||||||| ||||||||  |||||| ||||| |||||||| ||||||    
T  27015702 gttat---tttttctttactctctttatcttgtttatgctttggttgaattgtggttttgatatgcacttgattat 27015774  T

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Target: chr5; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 13239833 - 13239921
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaat 89  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||   ||| |||||||||||||||||||    
T  13239833 tctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaaatttggaccgaactgggtgaacaat 13239921  T

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Target: chr5; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 13343143 - 13343232
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||| ||||| |||||||||||||||||||||| | ||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  13343143 tctctttg-aagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcatgtttggaccgaactgggtgaacaatct 13343232  T

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Target: chr5; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 28278398 - 28278494
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgt 99  Q
    ||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||  |||| ||||||||||||||||||| |||||||||    
T  28278398 tctctttgtaaaaactcattgatagtggattggagagatcaatctctcctccagagtaggtca-agttggaccgaactgggtgaacaat-tcttggtgt 28278494  T

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Target: chr5; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 29751242 - 29751148
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgt 99  Q
    |||||||||| || |||||||||||||||||||   ||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||    
T  29751242 tttgtaagaactctttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgt 29751148  T

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Target: chr5; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 18441730 - 18441641
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctctt 94  Q
    |||||||||| |||||||||||||||||||||| | ||||||||||| ||||||||||| | ||| ||||||||||||||||||||||||    
T  18441730 tttgtaagaactcattgatagtggattggagagttcaatctctcctctagagtaggtcaagtttggaccgaactgggtgaacaatctctt 18441641  T

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Target: chr5; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 316844 - 317002
Alignment:
Q  1 tctctttgtaa-gaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgt 99  Q
    ||||||||||| ||| ||||||||| ||||| |||| ||| ||||||||| | |||||||||||| |||| |||||||| ||| |||||| |||| ||||    
T  316844 tctctttgtaaagaactcattgataatggatcggagggatcaatctctcccctagagtaggtcattgttggaccgaacttggtaaacaat-tctttgtgt 316942  T
Q  100 tgttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgct 162  Q
    |||| ||   ||||| ||||||||||||| |||||||||||||||||  |||||| |||||||    
T  316943 tgttctc---ttttccctactctctttattttgtttattctttggttcaattgtggttttgct 317002  T

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Target: chr5; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 10593343 - 10593438
Alignment:
Q  5 tttgtaagaattcatt-gatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgt 99  Q
    |||||||||| ||||| |||||||||||||||||   ||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||    
T  10593343 tttgtaagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgt 10593438  T

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Target: chr5; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 29720450 - 29720544
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgt 99  Q
    |||||||||| || |||||||||||||||||||   ||||||||||| ||||||||||| | ||| |||||||||||||||||||||||||||||    
T  29720450 tttgtaagaactctttgatagtggattggagagtacaatctctcctctagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgt 29720544  T

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Target: chr5; HSP #20
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 29722610 - 29722704
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgt 99  Q
    |||||||||| || |||||||||||||||||||   |||||||||||||||||||||||   ||| |||||||||||||||||||||||||||||    
T  29722610 tttgtaagaactctttgatagtggattggagagtacaatctctcctccagagtaggtcaaatttggaccgaactgggtgaacaatctcttggtgt 29722704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 22536372 - 22536279
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtg 98  Q
    |||||||||| || ||||||||||||||| |||   ||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||    
T  22536372 tttgtaagaactctttgatagtggattggggagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtg 22536279  T

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Target: chr5; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 30182670 - 30182760
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||| ||||| |||||||||||||||||||||| | |||||||||||||||||| |||| | ||| |||||||||| ||||||||||    
T  30182670 tctctttggaagaactcattgatagtggattggagagttcaatctctcctccagagtatgtcaagtttggaccgaactggatgaacaatct 30182760  T

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Target: chr5; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 25078221 - 25078302
Alignment:
Q  19 ttgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||||||||   ||||||||||||||||||||||| | ||| |||||||||||||||||||||||| |||||    
T  25078221 ttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtt 25078302  T

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Target: chr5; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 25136190 - 25136271
Alignment:
Q  19 ttgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||||||||   ||||||||||||||||||||||| | ||| |||||||||||||||||||||||| |||||    
T  25136190 ttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtt 25136271  T

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Target: chr5; HSP #25
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 40380191 - 40380272
Alignment:
Q  19 ttgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    ||||||||||||||||||| | || |||||||||||||||||||| | ||| |||||||||||||||||||||||| |||||    
T  40380191 ttgatagtggattggagagttcaaactctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtt 40380272  T

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Target: chr5; HSP #26
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 40382402 - 40382483
Alignment:
Q  19 ttgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    ||||||||||||||||||| | || |||||||||||||||||||| | ||| |||||||||||||||||||||||| |||||    
T  40382402 ttgatagtggattggagagttcaaactctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtt 40382483  T

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Target: chr5; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 16641008 - 16640863
Alignment:
Q  19 ttgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgttgttgtctatttttctcta 118  Q
    ||||||||||||||||||||| |||||||||||||||||||||||  || |  ||||||||||| ||| || ||||||||||||| ||| || ||  ||     
T  16641008 ttgatagtggattggagagatcaatctctcctccagagtaggtca-agtagggccgaactgggtaaac-atttcttggtgttgttatcttttctttgct- 16640912  T
Q  119 ctctctttatcttgtttattctttggttagattgtgattttgctatgca 167  Q
    |||| ||||||||| ||||||||| |||| |||||| ||||| ||||||    
T  16640911 ctctatttatcttgcttattctttagttaaattgtggttttgttatgca 16640863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 22 - 162
Target Start/End: Original strand, 4160702 - 4160838
Alignment:
Q  22 atagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgttgttgtctatttttctctactc 121  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||| ||| |||||||| ||  || | || |||||||| ||   |||||| |  ||    
T  4160702 atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccaaactgggt-aaatatttattagtgttgttatc---ttttctatgttc 4160797  T
Q  122 tctttatcttgtttattctttggttagattgtgattttgct 162  Q
    || |||||||||||||||||||||| |||| || |||||||    
T  4160798 tcattatcttgtttattctttggttcgattatggttttgct 4160838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 16452162 - 16452247
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaaca 87  Q
    |||||||||||||| ||||| |||||||||||||||||| ||||||||| |||||||||||||  |||| |||||||||||| ||||    
T  16452162 tctctttgtaagaactcattcatagtggattggagagataaatctctcccccagagtaggtca-agttggaccgaactgggtaaaca 16452247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 32636906 - 32636995
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| || ||||||||||||||||||||| ||||||||| ||||| |||||||  |||| |||||||||||| ||||||||    
T  32636906 tctctttgtaagaactctttgatagtggattggagagatcaatctctcccccagattaggtca-agttggaccgaactgggtcaacaatct 32636995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 36074128 - 36074039
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||| ||||| |||||||||||||||||||||| | ||||||||||||| ||||||||| | ||| |||||||||| ||||||||||    
T  36074128 tctctttg-aagaactcattgatagtggattggagagttcaatctctcctccaaagtaggtcaagtttggaccgaactggatgaacaatct 36074039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 42428516 - 42428427
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||| ||| | |||||||  |||| |||||||||||| ||||||||    
T  42428516 tctctttgtaagaactcattgatagtggattggagagatcaatctctcccccatattaggtca-agttggaccgaactgggtcaacaatct 42428427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 533851 - 533940
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| ||||||||||||||||||| |||| ||||||||| ||| | |||||||  |||| |||||||||||| ||||||||    
T  533851 tctctttgtaagaactcattgatagtggattggaaagatcaatctctcccccatattaggtca-agttggaccgaactgggtcaacaatct 533940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 13488285 - 13488374
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||| | ||| |||||||  |||| |||||||||||| || |||||    
T  13488285 tctctttgtaagaactcattgatagtggattggagagatcaatctctccccgagattaggtca-agttggaccgaactgggtcaataatct 13488374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 16544509 - 16544590
Alignment:
Q  19 ttgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||||||||   || |||||||||||||||||||| | ||| |||||||||||||| ||||||||| |||||    
T  16544509 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtt 16544590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 16546731 - 16546812
Alignment:
Q  19 ttgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||||||||   || |||||||||||||||||||| | ||| |||||||||||||| ||||||||| |||||    
T  16546731 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtt 16546812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 33831762 - 33831886
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| ||||||||||||||||| |||||| ||||||||| ||| | |||||||  |||| || ||||||||| |||||||| ||||||||    
T  33831762 tctctttgtaagaactcattgatagtggattgaagagatcaatctctcccccatattaggtca-agttggactgaactgggtcaacaatct-ttggtgtt 33831859  T
Q  101 gttgtctatttttctctactctctttatctt 131  Q
     |||    ||| ||||| |||||||||||||    
T  33831860 tttg----tttctctcttctctctttatctt 33831886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 538107 - 538196
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| ||||||||||| |||||||||||| ||||||||| ||| | |||||||  |||| |||||||||| | ||||||||    
T  538107 tctctttgtaagaactcattgatagtagattggagagatcaatctctcccccatattaggtca-agttggaccgaactggatcaacaatct 538196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 28750737 - 28750679
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtca 63  Q
    |||||||||| |||||||||||||||||||||||| ||||||||| ||||| |||||||    
T  28750737 tttgtaagaactcattgatagtggattggagagatcaatctctcccccagattaggtca 28750679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 33906117 - 33905956
Alignment:
Q  1 tctctttgtaa-gaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgt 99  Q
    ||||||||||| ||| ||||||||||| ||||||| |||| ||||||| | | |||||||||||  |||| ||||| |||||| ||||||   || ||||    
T  33906117 tctctttgtaaagaactcattgatagtagattggaaagatcaatctcttccctagagtaggtcaatgttggaccgagctgggtaaacaattcttttgtgt 33906018  T
Q  100 tgttgtctattt--ttctctactctctttatcttgtttattctttggttagattgtgatttt 159  Q
    | || | | |||  |||| ||||||||||||||||||||||| |||||| || |||| ||||    
T  33906017 ttttttttttttaattctatactctctttatcttgtttattcattggttcgaatgtggtttt 33905956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 42426321 - 42426259
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtca 63  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||| || || |||||||    
T  42426321 tctctttgtaagaactcattgatagtggattggagagatcaatctctccccctgattaggtca 42426259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 19806454 - 19806534
Alignment:
Q  10 aagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    ||||| || ||||||||||||||||||||| ||||||||| ||||| |||||||  |||| |||||||||||| ||||||||    
T  19806454 aagaactccttgatagtggattggagagatcaatctctcccccagattaggtca-agttggaccgaactgggtcaacaatct 19806534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 8566026 - 8565943
Alignment:
Q  7 tgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||| |||||||||||||||||||||||| ||||||||  ||||| |||||||  |||| |||||||| ||| ||||||||    
T  8566026 tgtaagaactcattgatagtggattggagagatcaatctctcacccagattaggtca-agttggaccgaactaggtcaacaatct 8565943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 30683008 - 30682930
Alignment:
Q  3 tctttgtaagaat--tcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgg 80  Q
    |||||||||||||  |||||||||||||||||||||||| ||||||||| ||||| |||||||  |||| ||||||||||    
T  30683008 tctttgtaagaatactcattgatagtggattggagagatcaatctctcccccagattaggtca-agttggaccgaactgg 30682930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 160
Target Start/End: Complemental strand, 10700725 - 10700580
Alignment:
Q  10 aagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgttgttgtctat 109  Q
    ||||| |||||||||||| | |||||||||   ||||||| ||| |||||||||| |||  ||||||||| || || |||   || |||||||| ||       
T  10700725 aagaactcattgatagtgaagtggagagat--ctctctcccccatagtaggtcattgtttcaccgaactgagtaaataattctttcgtgttgttctc--- 10700631  T
Q  110 ttttctctactctctttatcttgtttattctttggttagattgtgattttg 160  Q
    |||||||||| |||||||||||| |||||||||| || ||||||| |||||    
T  10700630 ttttctctacgctctttatcttgcttattctttgatttgattgtggttttg 10700580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 9049428 - 9049368
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggt 61  Q
    |||||||||||||| ||||||| |||||||||||||||| ||| ||||| ||| |||||||    
T  9049428 tctctttgtaagaactcattgacagtggattggagagatcaatatctcccccaaagtaggt 9049368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 39468635 - 39468587
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcc 49  Q
    |||||||||||||| |||||||||||||||| ||||||| |||||||||    
T  39468635 tctctttgtaagaactcattgatagtggattagagagatcaatctctcc 39468587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 13695777 - 13695714
Alignment:
Q  1 tctctttgtaa-gaattcattgatagtggattggagagattaatctctcctccagagtaggtca 63  Q
    ||||||||||| ||| ||||| |||||||||| ||||||||| ||||||||||| |||||||||    
T  13695777 tctctttgtaaagaactcattaatagtggattagagagattattctctcctccatagtaggtca 13695714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 111 - 146
Target Start/End: Original strand, 30793320 - 30793355
Alignment:
Q  111 tttctctactctctttatcttgtttattctttggtt 146  Q
    ||||||||||||||||||||||||||||||||||||    
T  30793320 tttctctactctctttatcttgtttattctttggtt 30793355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 31183056 - 31183138
Alignment:
Q  4 ctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaaca 87  Q
    ||||||||||| ||||||||| ||||||||||||||  |||||||| ||| | |||||||  |||| |||||||||||| ||||    
T  31183056 ctttgtaagaactcattgatactggattggagagatctatctctcccccatattaggtca-agttggaccgaactgggtcaaca 31183138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 317038 - 317123
Alignment:
Q  178 gttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttgga 268  Q
    ||||||||||||||| |||||||     ||||||||  |||||| |||||||||  |||||||| ||||||||||| |||||| |||||||    
T  317038 gttgttgttgcttgtggttattt-----tggttattggttgtcactgatacttgtcccacgaatctaaatttcattgatgtgagatttgga 317123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 3075740 - 3075682
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtca 63  Q
    ||||||||||||| ||||||||| ||||||||||| |||||||||  || |||||||||    
T  3075740 tttgtaagaattcgttgatagtgaattggagagatcaatctctccctcatagtaggtca 3075682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 287
Target Start/End: Complemental strand, 16640803 - 16640737
Alignment:
Q  221 attgatacttgctccacgaatttaaatttcattaatgtgaaatttggaattgaccgaattcacaaca 287  Q
    ||||||||||||||||||||| |||| || ||| | ||||| ||| |||||| ||||||||||||||    
T  16640803 attgatacttgctccacgaatctaaaatttattgacgtgaagtttagaattgtccgaattcacaaca 16640737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 213735 - 213795
Alignment:
Q  174 tattgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctc 234  Q
    |||||||||| |||||||| ||| ||||| |||||||||| ||||  ||||||||||||||    
T  213735 tattgttgttattgcttgtggttttttacatttggttattgattgctattgatacttgctc 213795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 10054903 - 10054744
Alignment:
Q  1 tctctttgtaa-gaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctctt-ggtg 98  Q
    ||||||||||| ||| |||||||||||| |||||||| || ||| ||||| ||| ||| ||| || |||| ||| |||| ||| ||| | ||||| ||||    
T  10054903 tctctttgtaatgaactcattgatagtgtattggagatatcaatatctcccccaaagtgggtaattgttggaccaaactaggtaaacga-ctctttggtg 10054805  T
Q  99 ttgttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgct 162  Q
    |||||  | ||||| || |||||| ||||||||||||||| |||| || |||||| ||||||||    
T  10054804 ttgtt--ccatttt-ctgtactctttttatcttgtttattttttgcttcgattgtaattttgct 10054744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 115 - 145
Target Start/End: Original strand, 30803016 - 30803046
Alignment:
Q  115 tctactctctttatcttgtttattctttggt 145  Q
    |||||||||||||||||||||||||||||||    
T  30803016 tctactctctttatcttgtttattctttggt 30803046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 42310021 - 42309963
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtag 59  Q
    |||||||||||||| | |||||||||||||| | ||||| ||||||||| ||| |||||    
T  42310021 tctctttgtaagaacttattgatagtggattagcgagatcaatctctcccccatagtag 42309963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 42926973 - 42927058
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaaca 87  Q
    |||||||||||||| ||||||| ||||||||| ||| || ||||||||   || |||||||||  |||| |||||||||||| ||||    
T  42926973 tctctttgtaagaactcattgacagtggattgaagaaataaatctctctctcatagtaggtca-agttggaccgaactgggtaaaca 42927058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 38747087 - 38747135
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcc 49  Q
    |||||||| || || |||||||||| ||||||||||||| |||||||||    
T  38747087 tctctttggaaaaactcattgatagaggattggagagatcaatctctcc 38747135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 18089 - 17927
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    ||||||||||| || |||||||||||||||||||||||| |||||||||||||| |||||||| | ||| | |||||||||||||| || ||||||||||    
T  18089 tctctttgtaa-aactcattgatagtggattggagagatcaatctctcctccagggtaggtcaagtttggatcgaactgggtgaac-atttcttggtgtt 17992  T
Q  101 gttgtctatttttctctactctctttatcttgtttatt-ctttggttagattgtgattttgctatgca 167  Q
    ||| ||   |||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  17991 gttatc---ttttctttactctctttatcttgtttattcctttggttagattgtggttttgctatgca 17927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 7409 - 7572
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||| ||||||||||||||||||| |||| ||||||||||| ||||||||| |  |||| |||||||||||||||| || ||||||||||    
T  7409 tctctttgtaagaactcattgatagtggattggaaagatcaatctctcctctagagtaggtta-agttggaccgaactgggtgaac-atttcttggtgtt 7506  T
Q  101 gttgtctatttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcact 169  Q
    ||| ||   |||||| ||||||||||||||||||||| ||||||||  |||||| ||||||||||||||    
T  7507 gttatc---ttttctttactctctttatcttgtttatcctttggttgaattgtggttttgctatgcact 7572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 11639 - 11737
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgt 99  Q
    |||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||    
T  11639 tctctttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgt 11737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 434615 - 434703
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaat 89  Q
    |||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||| | ||| |||||||||||||||||||    
T  434615 tctctttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaat 434703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 59; Significance: 7e-25; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 5 - 91
Target Start/End: Complemental strand, 8817 - 8731
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||| || ||||||||||||||||||| | ||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  8817 tttgtaagaactcgttgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 8731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 5 - 91
Target Start/End: Complemental strand, 11243 - 11157
Alignment:
Q  5 tttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||| || ||||||||||||||||||| | ||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  11243 tttgtaagaactcgttgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 11157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 114684 - 114774
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| | | ||  |||||||||| ||||||||||    
T  114684 tctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggttaagtttagaccgaactggatgaacaatct 114774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 1012 - 1087
Alignment:
Q  16 tcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  1012 tcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 1087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 149183 - 149094
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatct 91  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||| |  |||| |||||||||||| ||||||||    
T  149183 tctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagagtaggtta-agttggaccgaactgggtcaacaatct 149094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 3794 - 3713
Alignment:
Q  19 ttgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    ||||||||||||||||||| | ||||||||||||||||||||||| | ||| |||||||||||||| ||||||||| |||||    
T  3794 ttgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtt 3713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0927 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0927
Description:

Target: scaffold0927; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 183 - 287
Target Start/End: Complemental strand, 3484 - 3377
Alignment:
Q  183 tgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttggaatt---gaccgaat 279  Q
    |||||||||| ||||||||| ||| ||||||  ||| ||||||||||||||||| |||| ||||||||||| ||||||  |||||||||   ||||||||    
T  3484 tgttgcttgtggttatttacatttagttattggttgccattgatacttgctccatgaatctaaatttcattgatgtgaggtttggaatttgagaccgaat 3385  T
Q  280 tcacaaca 287  Q
    ||||||||    
T  3384 tcacaaca 3377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 2672 - 2591
Alignment:
Q  19 ttgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgtt 100  Q
    |||||||||||||||||||   ||||||||||||||||||||||| | ||| ||||||||||||||||||||| || |||||    
T  2672 ttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttttgtgtt 2591  T

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Target: scaffold0066 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 20501 - 20414
Alignment:
Q  1 tctctttgtaagaattcattgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaat 89  Q
    |||||||||||||| || |||||| |||||||||||||| ||||||||| ||||| |||||||  |||| |||||||||||| ||||||    
T  20501 tctctttgtaagaactctttgatattggattggagagatcaatctctcccccagattaggtca-agttggaccgaactgggtcaacaat 20414  T

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Target: scaffold0137 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 105
Target Start/End: Original strand, 6373 - 6459
Alignment:
Q  19 ttgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaactgggtgaacaatctcttggtgttgttgt 105  Q
    |||||||||||||||||||   || |||||||||||||||||| | | ||| |||||||||||||| ||||||||| ||||| ||||    
T  6373 ttgatagtggattggagagtacaaactctcctccagagtaggttaagtttggaccgaactgggtgaccaatctctttgtgttattgt 6459  T

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Target: scaffold0219 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 27511 - 27453
Alignment:
Q  18 attgatagtggattggagagattaatctctcctccagagtaggtcatggttgaaccgaa 76  Q
    |||||||||||||||||||||| ||||||||| ||| |||||||||| |||| ||||||    
T  27511 attgatagtggattggagagatcaatctctcccccatagtaggtcattgttggaccgaa 27453  T

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