View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2098_high_12 (Length: 328)
Name: NF2098_high_12
Description: NF2098
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2098_high_12 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 287; Significance: 1e-161; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 12 - 328
Target Start/End: Original strand, 48617857 - 48618172
Alignment:
| Q |
12 |
aaaggagattgactaataggagggggtggcgatagcagaatgggtgatcagttgcattattaatgaatgagaggtagaagagaatggagggaagaggagc |
111 |
Q |
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| T |
48617857 |
aaaggagattgactaataggagggggtggcgatagcagaatgggtgatcagttgcattattaatgaatgagaggtagaagataatggagggaagaggagc |
48617956 |
T |
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| Q |
112 |
caagaatgctatcacagcgttcttcaaattgctggtacaccccatcttcatgctcatttcaatattcatgccaattcctctttatatattatagctaaaa |
211 |
Q |
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| T |
48617957 |
caagaatgctatcacagcgttcttcaaattgctggtacaccccatcttcatgctcatttcaatattcatgcc--ttcctctttatatattatagctaaaa |
48618054 |
T |
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| Q |
212 |
actgaagaattaattaatgaatatccaattaat-aatggttaaacaaacttcagttttctgcttaattaattgtgggttccccacaatactacatagcat |
310 |
Q |
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| T |
48618055 |
actgaagaattaattaatgaatatccaattaataaataattaaacaaacttcagttttctgcttaattaattgtgggttccccacaatactacatagcat |
48618154 |
T |
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| Q |
311 |
taggcacgccctaccccc |
328 |
Q |
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| T |
48618155 |
taggcacgccctaccccc |
48618172 |
T |
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