View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2098_low_21 (Length: 253)

Name: NF2098_low_21
Description: NF2098
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2098_low_21
NF2098_low_21
[»] scaffold0433 (1 HSPs)
scaffold0433 (81-247)||(7751-7917)
[»] scaffold0390 (2 HSPs)
scaffold0390 (81-247)||(6331-6497)
scaffold0390 (81-247)||(13347-13513)
[»] scaffold0234 (2 HSPs)
scaffold0234 (81-247)||(1718-1884)
scaffold0234 (81-247)||(10609-10775)
[»] chr6 (38 HSPs)
chr6 (81-247)||(17690837-17691003)
chr6 (81-247)||(27380649-27380815)
chr6 (81-247)||(27471032-27471198)
chr6 (81-247)||(29309534-29309700)
chr6 (81-247)||(29316493-29316659)
chr6 (87-247)||(27297273-27297433)
chr6 (81-244)||(11652370-11652533)
chr6 (81-247)||(16558869-16559035)
chr6 (81-247)||(17683866-17684032)
chr6 (81-247)||(25536588-25536754)
chr6 (81-247)||(18336299-18336464)
chr6 (93-241)||(18019414-18019562)
chr6 (93-241)||(27525147-27525295)
chr6 (98-241)||(14075049-14075192)
chr6 (93-241)||(27507933-27508081)
chr6 (98-241)||(16789639-16789782)
chr6 (107-240)||(10358653-10358786)
chr6 (93-241)||(1585694-1585842)
chr6 (98-241)||(22859479-22859622)
chr6 (99-240)||(22559786-22559927)
chr6 (100-240)||(21995529-21995669)
chr6 (93-236)||(33317440-33317583)
chr6 (98-236)||(8613494-8613632)
chr6 (99-236)||(19734835-19734972)
chr6 (99-236)||(19735110-19735247)
chr6 (99-239)||(28173188-28173325)
chr6 (90-200)||(28755653-28755763)
chr6 (176-240)||(20735997-20736061)
chr6 (81-192)||(13358673-13358786)
chr6 (173-239)||(16393944-16394010)
chr6 (99-247)||(13194536-13194682)
chr6 (115-223)||(8065242-8065350)
chr6 (124-234)||(8510436-8510546)
chr6 (103-176)||(19219156-19219229)
chr6 (115-247)||(17849889-17850020)
chr6 (99-169)||(13175018-13175088)
chr6 (81-139)||(16393886-16393944)
chr6 (156-217)||(24465191-24465252)
[»] chr4 (54 HSPs)
chr4 (81-247)||(8858811-8858977)
chr4 (81-247)||(18262856-18263022)
chr4 (81-247)||(19926157-19926323)
chr4 (81-247)||(26964284-26964450)
chr4 (81-247)||(55613327-55613493)
chr4 (81-247)||(869241-869407)
chr4 (81-239)||(5714599-5714757)
chr4 (81-247)||(10620730-10620896)
chr4 (81-247)||(26971107-26971273)
chr4 (81-239)||(5707971-5708129)
chr4 (81-247)||(18269717-18269883)
chr4 (81-247)||(28392531-28392697)
chr4 (81-247)||(10627812-10627975)
chr4 (81-247)||(8845847-8846013)
chr4 (87-240)||(5667533-5667686)
chr4 (81-247)||(4426012-4426178)
chr4 (81-247)||(35224202-35224368)
chr4 (103-240)||(10676996-10677133)
chr4 (103-240)||(10890636-10890773)
chr4 (103-240)||(10689930-10690067)
chr4 (103-240)||(10903570-10903707)
chr4 (98-241)||(34976121-34976264)
chr4 (93-241)||(2677581-2677729)
chr4 (93-241)||(26532181-26532330)
chr4 (93-241)||(15462070-15462218)
chr4 (105-240)||(9488118-9488253)
chr4 (98-241)||(15815589-15815732)
chr4 (93-230)||(28917360-28917497)
chr4 (93-240)||(4546633-4546780)
chr4 (98-241)||(5870985-5871128)
chr4 (98-241)||(17299550-17299693)
chr4 (98-241)||(18110634-18110777)
chr4 (93-241)||(4675569-4675717)
chr4 (93-241)||(18163730-18163878)
chr4 (93-241)||(20244505-20244653)
chr4 (93-240)||(1942260-1942407)
chr4 (103-236)||(30040084-30040217)
chr4 (98-241)||(3368614-3368757)
chr4 (130-240)||(24701653-24701763)
chr4 (99-240)||(19362980-19363121)
chr4 (100-240)||(5524582-5524722)
chr4 (100-240)||(9538529-9538669)
chr4 (99-240)||(19373916-19374057)
chr4 (99-239)||(11421558-11421698)
chr4 (100-231)||(5616975-5617105)
chr4 (99-236)||(32637058-32637195)
chr4 (81-152)||(47388341-47388412)
chr4 (81-236)||(23055637-23055790)
chr4 (115-226)||(9937429-9937540)
chr4 (115-247)||(36092887-36093023)
chr4 (96-231)||(24699667-24699801)
chr4 (93-145)||(11483390-11483442)
chr4 (150-241)||(469147-469237)
chr4 (116-158)||(22805837-22805879)
[»] chr3 (40 HSPs)
chr3 (81-247)||(6110708-6110874)
chr3 (81-247)||(10571989-10572155)
chr3 (81-247)||(10578753-10578919)
chr3 (81-247)||(15600281-15600447)
chr3 (81-247)||(15606826-15606992)
chr3 (81-247)||(16481880-16482046)
chr3 (81-247)||(8491139-8491305)
chr3 (81-247)||(13211946-13212112)
chr3 (81-247)||(15356983-15357149)
chr3 (81-247)||(17780515-17780681)
chr3 (87-247)||(13517451-13517611)
chr3 (81-247)||(15341616-15341782)
chr3 (81-247)||(1646918-1647084)
chr3 (81-247)||(17136997-17137163)
chr3 (81-247)||(23014757-23014923)
chr3 (89-240)||(17197160-17197311)
chr3 (93-241)||(21034807-21034955)
chr3 (93-241)||(21399361-21399509)
chr3 (93-241)||(15846121-15846269)
chr3 (93-241)||(28088675-28088823)
chr3 (98-241)||(12300478-12300621)
chr3 (93-240)||(15316760-15316907)
chr3 (155-247)||(18520619-18520711)
chr3 (93-241)||(55427589-55427737)
chr3 (98-241)||(20147145-20147288)
chr3 (93-235)||(25978312-25978454)
chr3 (99-240)||(15538106-15538247)
chr3 (104-240)||(26816862-26816998)
chr3 (107-240)||(14147590-14147723)
chr3 (127-234)||(25800936-25801043)
chr3 (138-240)||(11788158-11788260)
chr3 (103-247)||(9504951-9505095)
chr3 (124-224)||(35199085-35199185)
chr3 (81-132)||(19081816-19081867)
chr3 (126-226)||(9250146-9250246)
chr3 (124-240)||(29925621-29925747)
chr3 (124-240)||(29974775-29974901)
chr3 (209-247)||(13249251-13249289)
chr3 (177-226)||(24252355-24252404)
chr3 (102-174)||(35543545-35543618)
[»] chr1 (35 HSPs)
chr1 (81-247)||(18252674-18252840)
chr1 (81-247)||(18531911-18532077)
chr1 (81-247)||(27309974-27310140)
chr1 (81-247)||(27130807-27130973)
chr1 (81-247)||(16358432-16358598)
chr1 (87-247)||(27276963-27277123)
chr1 (81-240)||(36816032-36816191)
chr1 (93-241)||(19706024-19706172)
chr1 (93-241)||(28134308-28134456)
chr1 (93-241)||(9456684-9456832)
chr1 (93-241)||(9460780-9460928)
chr1 (93-241)||(20779231-20779379)
chr1 (93-241)||(22613061-22613208)
chr1 (93-241)||(47667070-47667218)
chr1 (81-247)||(22641279-22641439)
chr1 (98-241)||(33283447-33283590)
chr1 (93-241)||(14482458-14482606)
chr1 (98-241)||(22669848-22669991)
chr1 (103-236)||(634513-634645)
chr1 (98-241)||(42816580-42816723)
chr1 (93-241)||(43801950-43802098)
chr1 (98-241)||(20390830-20390973)
chr1 (99-236)||(8728237-8728374)
chr1 (99-245)||(31234339-31234485)
chr1 (98-210)||(35935924-35936036)
chr1 (138-247)||(12006002-12006110)
chr1 (125-226)||(10852045-10852146)
chr1 (99-228)||(35132520-35132648)
chr1 (99-247)||(12013712-12013851)
chr1 (151-247)||(9916247-9916343)
chr1 (105-183)||(14234606-14234684)
chr1 (153-240)||(23507549-23507636)
chr1 (171-226)||(19959499-19959554)
chr1 (101-169)||(19819768-19819835)
chr1 (137-169)||(24301359-24301391)
[»] chr2 (23 HSPs)
chr2 (82-247)||(21329646-21329811)
chr2 (81-247)||(22791255-22791421)
chr2 (87-247)||(41661916-41662074)
chr2 (93-241)||(24249618-24249766)
chr2 (93-241)||(30174945-30175093)
chr2 (93-241)||(24228799-24228947)
chr2 (81-236)||(18620455-18620610)
chr2 (100-240)||(29801042-29801182)
chr2 (152-246)||(18797151-18797245)
chr2 (130-236)||(15341623-15341729)
chr2 (99-240)||(24763262-24763403)
chr2 (99-240)||(36270811-36270951)
chr2 (138-240)||(20687044-20687146)
chr2 (99-236)||(19617009-19617145)
chr2 (101-247)||(31848019-31848165)
chr2 (102-196)||(12298448-12298542)
chr2 (152-247)||(22182960-22183054)
chr2 (134-247)||(6991569-6991682)
chr2 (101-166)||(18822734-18822799)
chr2 (139-220)||(41332799-41332880)
chr2 (116-199)||(23662128-23662211)
chr2 (207-236)||(41315554-41315583)
chr2 (101-169)||(40300567-40300634)
[»] chr8 (35 HSPs)
chr8 (81-247)||(6094767-6094933)
chr8 (81-247)||(21941309-21941475)
chr8 (87-247)||(15326842-15327002)
chr8 (87-247)||(15507211-15507371)
chr8 (81-247)||(28548691-28548857)
chr8 (81-247)||(24643291-24643457)
chr8 (93-238)||(8370838-8370983)
chr8 (93-241)||(25611764-25611912)
chr8 (93-241)||(26241054-26241202)
chr8 (93-240)||(24796414-24796561)
chr8 (93-241)||(21969902-21970050)
chr8 (93-241)||(22130195-22130343)
chr8 (93-240)||(6431457-6431604)
chr8 (98-241)||(27007108-27007251)
chr8 (98-241)||(27014251-27014394)
chr8 (98-241)||(22659084-22659227)
chr8 (98-241)||(27880078-27880221)
chr8 (98-241)||(28020259-28020402)
chr8 (93-241)||(45533859-45534007)
chr8 (98-241)||(21917244-21917387)
chr8 (99-240)||(18835916-18836057)
chr8 (92-240)||(2962515-2962663)
chr8 (101-236)||(8781467-8781602)
chr8 (99-247)||(14978900-14979045)
chr8 (81-138)||(22172188-22172245)
chr8 (184-247)||(22172130-22172193)
chr8 (134-240)||(32872300-32872406)
chr8 (179-236)||(20534880-20534937)
chr8 (125-192)||(38231130-38231195)
chr8 (93-148)||(22646434-22646489)
chr8 (123-247)||(8967751-8967865)
chr8 (104-169)||(27098592-27098656)
chr8 (202-247)||(38231898-38231943)
chr8 (159-247)||(2375679-2375767)
chr8 (113-181)||(37031890-37031958)
[»] chr7 (41 HSPs)
chr7 (81-247)||(11535459-11535625)
chr7 (81-247)||(11542377-11542543)
chr7 (81-247)||(18561642-18561808)
chr7 (88-247)||(15153087-15153246)
chr7 (81-247)||(24850956-24851122)
chr7 (81-247)||(29328428-29328594)
chr7 (81-247)||(12751470-12751636)
chr7 (81-247)||(12739178-12739344)
chr7 (81-240)||(13392800-13392959)
chr7 (93-241)||(8465568-8465716)
chr7 (93-241)||(18400672-18400820)
chr7 (93-241)||(18407656-18407804)
chr7 (99-236)||(24442968-24443105)
chr7 (100-236)||(15168886-15169022)
chr7 (93-241)||(48808082-48808230)
chr7 (98-240)||(47166449-47166591)
chr7 (99-240)||(34129144-34129285)
chr7 (93-241)||(19231457-19231605)
chr7 (98-241)||(18138929-18139072)
chr7 (98-241)||(30254706-30254849)
chr7 (99-234)||(41680559-41680694)
chr7 (93-241)||(18257150-18257299)
chr7 (93-241)||(15730319-15730467)
chr7 (93-240)||(18258708-18258855)
chr7 (98-241)||(2205120-2205263)
chr7 (99-240)||(19393018-19393158)
chr7 (100-236)||(25845114-25845251)
chr7 (98-240)||(28131132-28131274)
chr7 (162-240)||(11546418-11546496)
chr7 (100-194)||(12410113-12410207)
chr7 (100-236)||(12393203-12393339)
chr7 (86-152)||(11557443-11557507)
chr7 (100-240)||(19389131-19389271)
chr7 (99-199)||(31189962-31190062)
chr7 (101-231)||(47833385-47833516)
chr7 (101-238)||(39112449-39112586)
chr7 (130-240)||(14592463-14592573)
chr7 (127-240)||(16012012-16012125)
chr7 (93-160)||(10666649-10666716)
chr7 (151-241)||(7396858-7396948)
chr7 (137-230)||(23387713-23387806)
[»] chr5 (28 HSPs)
chr5 (81-247)||(24694855-24695021)
chr5 (81-247)||(24701619-24701785)
chr5 (81-247)||(19713895-19714061)
chr5 (81-247)||(19706616-19706782)
chr5 (93-241)||(25804970-25805118)
chr5 (93-241)||(22941820-22941968)
chr5 (127-240)||(18567943-18568056)
chr5 (93-241)||(20941596-20941744)
chr5 (98-241)||(23546490-23546633)
chr5 (94-246)||(39539193-39539346)
chr5 (93-241)||(31097385-31097533)
chr5 (98-241)||(32467-32610)
chr5 (93-240)||(12764574-12764721)
chr5 (99-240)||(9811323-9811464)
chr5 (93-241)||(12789249-12789397)
chr5 (99-247)||(17282873-17283021)
chr5 (93-241)||(24932892-24933040)
chr5 (99-240)||(31651370-31651511)
chr5 (99-247)||(17298320-17298466)
chr5 (98-240)||(5098219-5098361)
chr5 (98-236)||(7865019-7865157)
chr5 (99-236)||(17314396-17314533)
chr5 (98-236)||(26245676-26245815)
chr5 (100-240)||(39535762-39535895)
chr5 (151-240)||(22546763-22546852)
chr5 (145-236)||(33476767-33476858)
chr5 (161-247)||(28719234-28719320)
chr5 (186-241)||(20099922-20099977)
[»] scaffold0061 (2 HSPs)
scaffold0061 (81-246)||(107-272)
scaffold0061 (81-246)||(5618-5783)
[»] scaffold0220 (1 HSPs)
scaffold0220 (81-247)||(18931-19097)
[»] scaffold0063 (1 HSPs)
scaffold0063 (81-240)||(6173-6332)
[»] scaffold0008 (1 HSPs)
scaffold0008 (81-247)||(229788-229954)
[»] scaffold0112 (1 HSPs)
scaffold0112 (93-241)||(752-900)
[»] scaffold0389 (1 HSPs)
scaffold0389 (93-241)||(731-879)
[»] scaffold0028 (1 HSPs)
scaffold0028 (93-241)||(120298-120446)
[»] scaffold0264 (1 HSPs)
scaffold0264 (98-241)||(3266-3409)
[»] scaffold0466 (1 HSPs)
scaffold0466 (126-240)||(12567-12681)
[»] scaffold0006 (1 HSPs)
scaffold0006 (93-240)||(66993-67140)
[»] scaffold0086 (1 HSPs)
scaffold0086 (98-240)||(54333-54475)
[»] scaffold0031 (1 HSPs)
scaffold0031 (99-236)||(39578-39715)
[»] scaffold0111 (1 HSPs)
scaffold0111 (99-220)||(27132-27253)
[»] scaffold1303 (1 HSPs)
scaffold1303 (81-160)||(1359-1438)
[»] scaffold0686 (1 HSPs)
scaffold0686 (93-182)||(8099-8188)
[»] scaffold0186 (1 HSPs)
scaffold0186 (175-247)||(25481-25553)
[»] scaffold0023 (1 HSPs)
scaffold0023 (103-240)||(108718-108855)
[»] scaffold0017 (1 HSPs)
scaffold0017 (93-178)||(128128-128213)
[»] scaffold0160 (1 HSPs)
scaffold0160 (152-239)||(24424-24511)
[»] scaffold0034 (1 HSPs)
scaffold0034 (202-247)||(81500-81545)
[»] scaffold0099 (1 HSPs)
scaffold0099 (126-247)||(9703-9830)
[»] scaffold0375 (2 HSPs)
scaffold0375 (199-240)||(15761-15802)
scaffold0375 (81-149)||(15842-15910)


Alignment Details
Target: scaffold0433 (Bit Score: 159; Significance: 9e-85; HSPs: 1)
Name: scaffold0433
Description:

Target: scaffold0433; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 81 - 247
Target Start/End: Complemental strand, 7917 - 7751
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7917 tctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 7818  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  7817 ctagcaacacatcactgctacccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 7751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 159; Significance: 9e-85; HSPs: 2)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 81 - 247
Target Start/End: Original strand, 6331 - 6497
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6331 tctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 6430  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  6431 ctagcaacacatcactgctacccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 6497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 81 - 247
Target Start/End: Original strand, 13347 - 13513
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  13347 tctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttgacaataatattaaatcacatatttaatattataaacagtgagcggtat 13446  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  13447 ctagcaacacatcactgctacccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 13513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 159; Significance: 9e-85; HSPs: 2)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 81 - 247
Target Start/End: Original strand, 1718 - 1884
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1718 tctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 1817  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  1818 ctagcaacacatcactgctacccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 1884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #2
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 81 - 247
Target Start/End: Original strand, 10609 - 10775
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10609 tctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 10708  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  10709 ctagcaacacatcactgctacccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 10775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 159; Significance: 9e-85; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 81 - 247
Target Start/End: Original strand, 17690837 - 17691003
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17690837 tctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 17690936  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  17690937 ctagcaacacatcactgctacccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 17691003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 81 - 247
Target Start/End: Original strand, 27380649 - 27380815
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27380649 tctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 27380748  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  27380749 ctagcaacacatcactgctacccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 27380815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 81 - 247
Target Start/End: Original strand, 27471032 - 27471198
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27471032 tctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 27471131  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  27471132 ctagcaacacatcactgctacccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 27471198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 81 - 247
Target Start/End: Complemental strand, 29309700 - 29309534
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29309700 tctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 29309601  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  29309600 ctagcaacacatcactgctacccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 29309534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 81 - 247
Target Start/End: Complemental strand, 29316659 - 29316493
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29316659 tctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 29316560  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  29316559 ctagcaacacatcactgctacccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 29316493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 87 - 247
Target Start/End: Complemental strand, 27297433 - 27297273
Alignment:
Q  87 atctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagca 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27297433 atctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacaaatttaatattataaacagtgagcggtatctagca 27297334  T
Q  187 acacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  27297333 acacatcactgctacccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 27297273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 81 - 244
Target Start/End: Complemental strand, 11652533 - 11652370
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11652533 tctctcatctatttgtcctttgtgtgtgaccctataggttcccgtaatgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 11652434  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgt 244  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  11652433 ctagcaacacatcactgctacccaagtgacgagaatgtcatgtgatctgacgaaacctttctgt 11652370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 81 - 247
Target Start/End: Original strand, 16558869 - 16559035
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  16558869 tctctcatctatctgtcctttgtgtgtgaccatataggttcccgtaacgttgacaataatattaaatcacatatttaatattataaacagtgagcggtat 16558968  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||||    
T  16558969 ctagcaacacatcactgttacccaagtgacgagaatgtcatgtgatctgacgaaatctttctgtgat 16559035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 81 - 247
Target Start/End: Original strand, 17683866 - 17684032
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  17683866 tctctcatctatctgtcatttgtgtgtgatcctataggttcccgtaacgttggcaataatattaaatcacatatttaatactataaacagtgagcggtat 17683965  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  17683966 ctagcaacacatcactgctacccaagtgacgagaatgtcatgtgatctgacgaaacttttctgtgat 17684032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 81 - 247
Target Start/End: Original strand, 25536588 - 25536754
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  25536588 tctctcatctatctgtcctttgtgtgtgaccctataggttccagtaacattggcaataatattaaatcacatatttaatactataaacagtgagcggtat 25536687  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||| ||||||||||||  | |||| |||||||||||||||||||| ||||||||||||||||||||    
T  25536688 ctagtaacacatcactgtaacccaactgacgagaatgtcatgtgatatgacgaaacctttctgtgat 25536754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 81 - 247
Target Start/End: Complemental strand, 18336464 - 18336299
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| |||||| |||| ||||||||  |||||||||||||  | ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  18336464 tctcttatctatttgtcttttgtgtgcaaccctataggttcttggaacgttgacaataatattaaatcacatatttaatattataaacagtgagaggtat 18336365  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||||||||||| |||||||||||||||||||||||| || | ||||||||||||||||    
T  18336364 ctagcaacacatcactgctacccaagtgacgagaatgtcatgtgaact-aagaaacctttctgtgat 18336299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 93 - 241
Target Start/End: Original strand, 18019414 - 18019562
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||| ||||||||||||||| ||||||||  || ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  18019414 ctgttctttgtgtgtgaccccataggttctagtcacgttggcaataatattaaatctgatatttaatattataaacaatgagcggtatctagcaacacat 18019513  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    || ||||| ||||||||| ||||||||| ||||||||||||||||||||    
T  18019514 cattgctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 18019562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 93 - 241
Target Start/End: Original strand, 27525147 - 27525295
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||| |||| ||||||||||| |||||||  || ||||||||||||||||||||||  ||||||||||||||||||| | ||||||||||||||||||||    
T  27525147 ctgttctttttgtgtgaccctttaggttctagtcacgttggcaataatattaaatctaatatttaatattataaacaattagcggtatctagcaacacat 27525246  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    || ||||| ||||||||| ||||||||| ||||||||||||||||||||    
T  27525247 cattgctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 27525295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 98 - 241
Target Start/End: Complemental strand, 14075192 - 14075049
Alignment:
Q  98 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactg 197  Q
    ||||||||||||||||||||||||  || |||||||||||||||||||||   |||||||||| |||||||| |||||||||||||||||||||||| ||    
T  14075192 ctttgtgtgtgaccctataggttctagtcacgttggcaataatattaaatttaatatttaatactataaacaatgagcggtatctagcaacacatcattg 14075093  T
Q  198 ctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    ||  ||||||||| ||||||||| ||||||||||||||||||||    
T  14075092 cttcccaagtgacaagaatgtcaagtgatctgacgaaacctttc 14075049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 93 - 241
Target Start/End: Original strand, 27507933 - 27508081
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||| |||| ||||||||||| |||||||  || ||||||||||||||||||||||  ||||||||||||||||||| | ||||||||||||||||||||    
T  27507933 ctgttctttttgtgtgaccctttaggttctagtcacgttggcaataatattaaatctaatatttaatattataaacaattagcggtatctagcaacacat 27508032  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    || ||||| ||||||||| ||||||||| |||||| |||||||||||||    
T  27508033 cattgctacccaagtgacaagaatgtcaagtgatccgacgaaacctttc 27508081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 98 - 241
Target Start/End: Complemental strand, 16789782 - 16789639
Alignment:
Q  98 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactg 197  Q
    |||||||||||||||| |||||||  || ||||||||||| ||||||||||  ||||||||||  ||||||| |||||||||||||||||||||||| ||    
T  16789782 ctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatctaatatttaataccataaacaatgagcggtatctagcaacacatcattg 16789683  T
Q  198 ctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    ||| ||||||||| ||||||||| ||||||||||||||||||||    
T  16789682 ctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 16789639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 107 - 240
Target Start/End: Original strand, 10358653 - 10358786
Alignment:
Q  107 tgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctatccaag 206  Q
    |||||||||||||||  ||| ||||| ||||||||||||||   ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  10358653 tgaccctataggttcttgtatcgttgacaataatattaaatattatatttaatattataaacagtgaacggtatctagcaacaaatcactgctatccaag 10358752  T
Q  207 tgacgagaatgtcatgtgatctgacgaaaccttt 240  Q
    |||| |||||| || |||||||||||||||||||    
T  10358753 tgacaagaatgccaagtgatctgacgaaaccttt 10358786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 93 - 241
Target Start/End: Original strand, 1585694 - 1585842
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||| |||||||||||||||| |||||||  || ||||||||||| ||||||||||  |||| |||||  ||||||| ||||||||||||||||||||||    
T  1585694 ctgttctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatctaatatctaataccataaacaatgagcggtatctagcaacacat 1585793  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    || ||||| ||||||||| ||||||||| ||||||||||||||||||||    
T  1585794 cattgctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 1585842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 98 - 241
Target Start/End: Original strand, 22859479 - 22859622
Alignment:
Q  98 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacat-atttaatattataaacagtgagcggtatctagcaacacatcact 196  Q
    |||||||||||||||| |||||||  || ||||||||||| |||||||||| ||| ||||||||| ||||||| |||||||||||||||||||||||| |    
T  22859479 ctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatc-catcatttaatatcataaacaatgagcggtatctagcaacacatcatt 22859577  T
Q  197 gctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    |||| ||||||||| ||||||||| ||||||||||||||||||||    
T  22859578 gctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 22859622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 99 - 240
Target Start/End: Original strand, 22559786 - 22559927
Alignment:
Q  99 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgc 198  Q
    ||||||||| |||||||||||||  || ||||||| |||||||||||||   ||||||||||||||||||| |||||||||||||  ||||||||| |||    
T  22559786 tttgtgtgtaaccctataggttctagtcacgttggtaataatattaaatataatatttaatattataaacaatgagcggtatctaaaaacacatcattgc 22559885  T
Q  199 tatccaagtgacgagaatgtcatgtgatctgacgaaaccttt 240  Q
    || ||||||||| |||||||||  ||||||||||||||||||    
T  22559886 tacccaagtgacaagaatgtcacatgatctgacgaaaccttt 22559927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 100 - 240
Target Start/End: Complemental strand, 21995669 - 21995529
Alignment:
Q  100 ttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgct 199  Q
    ||||||||||||| ||| ||||  || ||||||| ||||||||||||||  |||||||| |||||||||| ||||||||||||||||| |||||| ||||    
T  21995669 ttgtgtgtgaccccatatgttctagtcacgttggaaataatattaaatctaatatttaaaattataaacaatgagcggtatctagcaatacatcattgct 21995570  T
Q  200 atccaagtgacgagaatgtcatgtgatctgacgaaaccttt 240  Q
    ||||||||||| ||||||| | |||||||||| ||||||||    
T  21995569 atccaagtgacaagaatgttaagtgatctgacaaaaccttt 21995529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 93 - 236
Target Start/End: Complemental strand, 33317583 - 33317440
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||| |||||||||||||||| |||||||  || ||||||| ||||||||||||||  ||||||| || |||||| | ||||||||||||||||||||||    
T  33317583 ctgttctttgtgtgtgaccctgtaggttctagtcacgttggtaataatattaaatctaatatttattactataaataatgagcggtatctagcaacacat 33317484  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctgacgaaac 236  Q
    || ||||| ||||||||| | ||||||| |||||||||||||||    
T  33317483 cattgctacccaagtgacaaaaatgtcaagtgatctgacgaaac 33317440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 98 - 236
Target Start/End: Complemental strand, 8613632 - 8613494
Alignment:
Q  98 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactg 197  Q
    ||||||||||||||||||||||||  || ||||||| ||||||||||||||  ||||||| || |||||| | |||||| |||||| |||||||||| ||    
T  8613632 ctttgtgtgtgaccctataggttctagtcacgttggtaataatattaaatctaatatttattactataaataatgagcgatatctaacaacacatcattg 8613533  T
Q  198 ctatccaagtgacgagaatgtcatgtgatctgacgaaac 236  Q
    ||| ||||||||| ||||||||| |||||||||||||||    
T  8613532 ctacccaagtgacaagaatgtcaagtgatctgacgaaac 8613494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 19734835 - 19734972
Alignment:
Q  99 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgc 198  Q
    |||||||||||||| ||| |||   || ||||||||||||||||||||||   |||||||||||||||||| |||||||| |||||||||| |||| |||    
T  19734835 tttgtgtgtgaccccataagttttagtcacgttggcaataatattaaatctagtatttaatattataaacaatgagcggtgtctagcaacatatcattgc 19734934  T
Q  199 tatccaagtgacgagaatgtcatgtgatctgacgaaac 236  Q
    || ||||||||| ||||||||| ||||| |||| ||||    
T  19734935 tacccaagtgacaagaatgtcaagtgatttgacaaaac 19734972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 19735110 - 19735247
Alignment:
Q  99 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgc 198  Q
    |||||||||||||| ||| |||   || ||||||||||||||||||||||   |||||||||||||||||| |||||||| |||||||||| |||| |||    
T  19735110 tttgtgtgtgaccccataagttttagtcacgttggcaataatattaaatctagtatttaatattataaacaatgagcggtgtctagcaacatatcattgc 19735209  T
Q  199 tatccaagtgacgagaatgtcatgtgatctgacgaaac 236  Q
    || ||||||||| ||||||||| ||||| |||| ||||    
T  19735210 tacccaagtgacaagaatgtcaagtgatttgacaaaac 19735247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 99 - 239
Target Start/End: Complemental strand, 28173325 - 28173188
Alignment:
Q  99 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgc 198  Q
    ||||||| ||||||| |||||||  |||||| || |||||| ||||||| |  ||||||||||||| |||||||||||||||||||| ||||||||||||    
T  28173325 tttgtgtatgaccctgtaggttcttgtaacggtgacaataa-attaaatta--tatttaatattatgaacagtgagcggtatctagccacacatcactgc 28173229  T
Q  199 tatccaagtgacgagaatgtcatgtgatctgacgaaacctt 239  Q
    || ||||||||| |||||||||   ||||| ||||||||||    
T  28173228 tacccaagtgacaagaatgtcaatcgatctcacgaaacctt 28173188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 90 - 200
Target Start/End: Original strand, 28755653 - 28755763
Alignment:
Q  90 tatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaaca 189  Q
    |||||||  ||||||||||| ||| || |||| |||||||||| |||||| ||||||| |||||||||||||||||||||||||||||| | ||||||||    
T  28755653 tatctgttatttgtgtgtgatcctctatgttctcgtaacgttgacaataacattaaattacatatttaatattataaacagtgagcggtgtatagcaaca 28755752  T
Q  190 catcactgcta 200  Q
    ||  |||||||    
T  28755753 caatactgcta 28755763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 176 - 240
Target Start/End: Original strand, 20735997 - 20736061
Alignment:
Q  176 ggtatctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaaccttt 240  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||    
T  20735997 ggtatctagcaacacatcattgctatccaagtgacaagaatgtcaagtgatctgacgaaaccttt 20736061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 81 - 192
Target Start/End: Original strand, 13358673 - 13358786
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatat--taaatcacatatttaatattataaacagtgagcggt 178  Q
    ||||| ||||||||||| ||||||||||||  | ||||||| |||||| ||| |||||||||  ||||| |||||||| ||| ||| ||||||||||| |    
T  13358673 tctcttatctatctgtcatttgtgtgtgacaatgtaggttcacgtaaccttgacaataatatattaaattacatatttgatactattaacagtgagcgat 13358772  T
Q  179 atctagcaacacat 192  Q
    ||||||||||||||    
T  13358773 atctagcaacacat 13358786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 173 - 239
Target Start/End: Original strand, 16393944 - 16394010
Alignment:
Q  173 agcggtatctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctt 239  Q
    |||||||||||||||||||  ||||||| |||||||||||||||||||||| |||||||||||||||    
T  16393944 agcggtatctagcaacacaatactgctacccaagtgacgagaatgtcatgtaatctgacgaaacctt 16394010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 99 - 247
Target Start/End: Complemental strand, 13194682 - 13194536
Alignment:
Q  99 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgc 198  Q
    |||||||||||||||||||||||  ||   ||| | ||||||||||||| | |||| ||||||||||||||  ||   | || |||||| ||||||||||    
T  13194682 tttgtgtgtgaccctataggttcttgtcgtgttagaaataatattaaattatatatgtaatattataaacaaagaa--gaatatagcaatacatcactgc 13194585  T
Q  199 tatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||| |||  |||||||||||||| |||| ||| |||||||||||    
T  13194584 tatccaagagacaggaatgtcatgtgatatgactaaatctttctgtgat 13194536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 115 - 223
Target Start/End: Original strand, 8065242 - 8065350
Alignment:
Q  115 taggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctatccaagtgacgaga 214  Q
    ||||||| |||||| ||| |||||||||| ||| ||| ||||||| ||||||||| |||||  |||  |  ||||||||||||||| |||||||||||||    
T  8065242 taggttctcgtaacattgacaataatattgaatgacacatttaattttataaacaatgagcaatatacaataacacatcactgctaaccaagtgacgaga 8065341  T
Q  215 atgtcatgt 223  Q
    |||||||||    
T  8065342 atgtcatgt 8065350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 234
Target Start/End: Complemental strand, 8510546 - 8510436
Alignment:
Q  124 gtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctatccaagtgacgagaatgtcatgt 223  Q
    |||||||||  ||||||||||||||  |  |||||||||||||||| ||||   ||||||| ||||||||||||  | ||||| | | | ||||||||||    
T  8510546 gtaacgttgaaaataatattaaatcttacttttaatattataaacaatgagtaatatctaggaacacatcactgtcacccaaggggcaataatgtcatgt 8510447  T
Q  224 gatctgacgaa 234  Q
    |||||||||||    
T  8510446 gatctgacgaa 8510436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 176
Target Start/End: Complemental strand, 19219229 - 19219156
Alignment:
Q  103 tgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcg 176  Q
    ||||||| |||||||||||  || |||||||||||||||||||||   ||| ||| ||||||||||| ||||||    
T  19219229 tgtgtgatcctataggttctagtcacgttggcaataatattaaatataataattactattataaacaatgagcg 19219156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 247
Target Start/End: Original strand, 17849889 - 17850020
Alignment:
Q  115 taggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctatccaagtgacgaga 214  Q
    ||||||| ||||  |||| || ||||||||||||| | ||| |||||||||| ||||||  | ||| |||  ||||||||||||| | ||||| ||||||    
T  17849889 taggttctcgtatagttgacagtaatattaaatcatacattaaatattataaccagtgatag-tatttagttacacatcactgctttacaagtaacgaga 17849987  T
Q  215 atgtcatgtgatctgacgaaacctttctgtgat 247  Q
    || |||||| || ||| ||||| ||| ||||||    
T  17849988 atttcatgtaatttgatgaaacatttatgtgat 17850020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 13175088 - 13175018
Alignment:
Q  99 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaaca 169  Q
    |||||||||||||||||||||||  ||   ||||| |||||||| ||||   |||||||||||||||||||    
T  13175088 tttgtgtgtgaccctataggttcttgtcgtgttggaaataatatgaaatattatatttaatattataaaca 13175018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 139
Target Start/End: Original strand, 16393886 - 16393944
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataa 139  Q
    ||||| ||||||||||| ||||| ||||| ||||||||| | | |||||||||||||||    
T  16393886 tctctcatctatctgtcatttgtttgtgagcctataggtactcataacgttggcaataa 16393944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 217
Target Start/End: Original strand, 24465191 - 24465252
Alignment:
Q  156 taatattataaacagtgagcggtatctagcaacacatcactgctatccaagtgacgagaatg 217  Q
    |||||||||||||| ||||  |||||||||||| |||||||| || || |||||| ||||||    
T  24465191 taatattataaacaatgagtagtatctagcaactcatcactgttaccctagtgacaagaatg 24465252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 159; Significance: 9e-85; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 81 - 247
Target Start/End: Complemental strand, 8858977 - 8858811
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8858977 tctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 8858878  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  8858877 ctagcaacacatcactgctacccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 8858811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 81 - 247
Target Start/End: Complemental strand, 18263022 - 18262856
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18263022 tctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 18262923  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  18262922 ctagcaacacatcactgctacccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 18262856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 81 - 247
Target Start/End: Original strand, 19926157 - 19926323
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19926157 tctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 19926256  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  19926257 ctagcaacacatcactgctacccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 19926323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 81 - 247
Target Start/End: Complemental strand, 26964450 - 26964284
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26964450 tctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacattggcaataatattaaatcacatatttaatattataaacagtgagcggtat 26964351  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  26964350 ctagcaacacatcactgctacccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 26964284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 81 - 247
Target Start/End: Complemental strand, 55613493 - 55613327
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55613493 tctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 55613394  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  55613393 caagcaacacatcactgctacccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 55613327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 81 - 247
Target Start/End: Complemental strand, 869407 - 869241
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  869407 tctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 869308  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||    
T  869307 ctagcaacacatcactgctacccaagtgacgagaatgtcatgcgatctaacgaaacctttctgtgat 869241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 81 - 239
Target Start/End: Complemental strand, 5714757 - 5714599
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5714757 tctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 5714658  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctt 239  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  5714657 ctagcaacacatcactgctacccaagtgacgagaatgtcatgtgatctgacgaaacctt 5714599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 81 - 247
Target Start/End: Original strand, 10620730 - 10620896
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  10620730 tctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttgacaataatattaaatcacatatttaatattataaacagtgagcggtaa 10620829  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  10620830 ctagcaacacatcactgctacccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 10620896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 81 - 247
Target Start/End: Complemental strand, 26971273 - 26971107
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26971273 tctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacattggcaataatattaaatcacatatttaatattataaacagtgagcggtat 26971174  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  26971173 ctagcaacacatcactgctacccaagtgacgagaatgttatgtgatctgacgaaacctttctgtgat 26971107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 81 - 239
Target Start/End: Complemental strand, 5708129 - 5707971
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5708129 tctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 5708030  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctt 239  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  5708029 ctagcaacatatcactgctacccaagtgacgagaatgtcatgtgatctgacgaaacctt 5707971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 81 - 247
Target Start/End: Complemental strand, 18269883 - 18269717
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18269883 tctctcatctatctatcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 18269784  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  18269783 ctagcatcacatcactgctacccaagtgacgagaatgtcaggtgatctgacgaaacctttctgtgat 18269717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 81 - 247
Target Start/End: Original strand, 28392531 - 28392697
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  28392531 tctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaatgttggcaataatattaaatcacatatttaatattataaacagtgaacggtat 28392630  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  28392631 ctagcaacacatcactgctacccaagtgacgagaatgtcatgtgatctgatgaaacctttctgtgat 28392697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 81 - 247
Target Start/End: Original strand, 10627812 - 10627975
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||   |||||||||||||||||||||||||||||||||    
T  10627812 tctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttgacaataatatta---cacatatttaatattataaacagtgagcggtat 10627908  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  10627909 ctagcaacacatcactgctacccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 10627975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 81 - 247
Target Start/End: Complemental strand, 8846013 - 8845847
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  8846013 tctctcatctatatgtactttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaataacatatttaatattataaacagtgagtggtat 8845914  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  8845913 ctagcaacacatcactactacccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 8845847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 87 - 240
Target Start/End: Original strand, 5667533 - 5667686
Alignment:
Q  87 atctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagca 186  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  5667533 atctatctgtcctttgtgtgtgaccctataggttctcgtaacgttgacaataatattgaatcacatatttaatattataaacagtgagcggtacctagca 5667632  T
Q  187 acacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaaccttt 240  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  5667633 acacatcactgctacccaagtgacgagaatgtcatgtgatctgacgaaaccttt 5667686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 81 - 247
Target Start/End: Original strand, 4426012 - 4426178
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||    
T  4426012 tctctcatctatctgtcctttgtgtgtgaccctataggttctcgtaacgttggcaataatattaaatcacatatttaatattataaacaatgagtagtat 4426111  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    ||| |||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  4426112 ctaacaacacatcactactacctaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 4426178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 81 - 247
Target Start/End: Complemental strand, 35224368 - 35224202
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| |||||| |||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35224368 tctctcatctatttgtcctttgtgtgtgaccatataggttctcgttacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 35224269  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||||||||||| |||||||||||||||| || ||||||||| ||||| |||| |||||    
T  35224268 ctagcaacacatcactgctacccaagtgacgagaatgacacgtgatctgatgaaacttttccgtgat 35224202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 103 - 240
Target Start/End: Original strand, 10676996 - 10677133
Alignment:
Q  103 tgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctatc 202  Q
    ||||||||||| || ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10676996 tgtgtgaccctctaagtttccgtaacgttgacaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctatc 10677095  T
Q  203 caagtgacgagaatgtcatgtgatctgacgaaaccttt 240  Q
    |||||||| |||||||||||||||||||| ||||||||    
T  10677096 caagtgacaagaatgtcatgtgatctgacaaaaccttt 10677133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 103 - 240
Target Start/End: Original strand, 10890636 - 10890773
Alignment:
Q  103 tgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctatc 202  Q
    ||||||||||| || ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10890636 tgtgtgaccctctaagtttccgtaacgttgacaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctatc 10890735  T
Q  203 caagtgacgagaatgtcatgtgatctgacgaaaccttt 240  Q
    |||||||| |||||||||||||||||||| ||||||||    
T  10890736 caagtgacaagaatgtcatgtgatctgacaaaaccttt 10890773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 103 - 240
Target Start/End: Complemental strand, 10690067 - 10689930
Alignment:
Q  103 tgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctatc 202  Q
    ||||||||||| || |||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  10690067 tgtgtgaccctgtaagttcccgtaacgctgacaataatatttaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctacc 10689968  T
Q  203 caagtgacgagaatgtcatgtgatctgacgaaaccttt 240  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  10689967 caagtgacgagaatgtcatgtgatctgacaaaaccttt 10689930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 103 - 240
Target Start/End: Complemental strand, 10903707 - 10903570
Alignment:
Q  103 tgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctatc 202  Q
    ||||||||||| || |||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  10903707 tgtgtgaccctgtaagttcccgtaacgctgacaataatatttaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctacc 10903608  T
Q  203 caagtgacgagaatgtcatgtgatctgacgaaaccttt 240  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  10903607 caagtgacgagaatgtcatgtgatctgacaaaaccttt 10903570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 98 - 241
Target Start/End: Complemental strand, 34976264 - 34976121
Alignment:
Q  98 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactg 197  Q
    ||||||||||||||||||||||||  || ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||| |||||||||| ||    
T  34976264 ctttgtgtgtgaccctataggttctagtcacgttggcaataatattaaatctaatatttaatattataaacaatgagcggtatctaacaacacatcattg 34976165  T
Q  198 ctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    ||| ||||||||| ||||||||| ||||||||||||||||||||    
T  34976164 ctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 34976121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 93 - 241
Target Start/End: Complemental strand, 2677729 - 2677581
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||| |||||||||||||||| |||||||  || ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  2677729 ctgttctttgtgtgtgaccctttaggttctagtcacgttggcaataatattaaatctaatatttaatattataaacaatgagcggtatctagcaacacat 2677630  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    ||  |||| ||||||||| ||||||||| ||||||||||||||||||||    
T  2677629 catggctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 2677581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 93 - 241
Target Start/End: Complemental strand, 26532330 - 26532181
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcaca-tatttaatattataaacagtgagcggtatctagcaacaca 191  Q
    |||| |||||||||||||||| |||||||  || ||||||||||||||||||||||  | |||||||||||||||||| |||||||||||||||||||||    
T  26532330 ctgttctttgtgtgtgaccctttaggttctagtcacgttggcaataatattaaatcttaatatttaatattataaacaatgagcggtatctagcaacaca 26532231  T
Q  192 tcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    ||| ||||| ||||||||| ||||||||| ||||||||||||||||||||    
T  26532230 tcattgctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 26532181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 93 - 241
Target Start/End: Complemental strand, 15462218 - 15462070
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||| |||||||||||||||||||||||   || ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  15462218 ctgttctttgtgtgtgaccctataggttttagtcacgttggcaataatattaaatctgatatttaatattataaacaatgagcggtatctagcaacacat 15462119  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    || ||||| ||||||||| | ||||||| ||||||||| ||||||||||    
T  15462118 cattgctacccaagtgacaaaaatgtcaagtgatctgatgaaacctttc 15462070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 105 - 240
Target Start/End: Complemental strand, 9488253 - 9488118
Alignment:
Q  105 tgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctatcca 204  Q
    |||||||||||||||||  || ||||||||||||||||||||||  ||||||||||||||||||| ||||| |||||||||||||||||| |||||||||    
T  9488253 tgtgaccctataggttctagtcacgttggcaataatattaaatctaatatttaatattataaacaatgagcagtatctagcaacacatcattgctatcca 9488154  T
Q  205 agtgacgagaatgtcatgtgatctgacgaaaccttt 240  Q
    |||||| ||||||||| |||||||||||||| ||||    
T  9488153 agtgacaagaatgtcaagtgatctgacgaaaacttt 9488118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 98 - 241
Target Start/End: Complemental strand, 15815732 - 15815589
Alignment:
Q  98 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactg 197  Q
    |||||||||||||||| |||||||  || ||||||||||| ||||||||||  ||||||||||| ||||||| |||||||||||||||||||||||| ||    
T  15815732 ctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatctaatatttaatatcataaacaatgagcggtatctagcaacacatcattg 15815633  T
Q  198 ctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    ||| ||||||||| ||||||||| ||||||||||||||||||||    
T  15815632 ctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 15815589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 93 - 230
Target Start/End: Original strand, 28917360 - 28917497
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||| ||||||||||||||||||||||||  || |||||||||||||||||||||   ||||||||||||||||||| ||||||||||||||||||||||    
T  28917360 ctgttctttgtgtgtgaccctataggttctagtcacgttggcaataatattaaatatgatatttaatattataaacaatgagcggtatctagcaacacat 28917459  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctga 230  Q
    || ||||| ||||||||| ||||||||| |||||||||    
T  28917460 cattgctacccaagtgacaagaatgtcaagtgatctga 28917497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 93 - 240
Target Start/End: Complemental strand, 4546780 - 4546633
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||| ||||||||||| || |||||||||  || ||||||| ||||||||||||||  |||||||||| |||||||| ||||||||||||||||||||||    
T  4546780 ctgttctttgtgtgtggccttataggttctagtcacgttggaaataatattaaatctaatatttaatactataaacaatgagcggtatctagcaacacat 4546681  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctgacgaaaccttt 240  Q
    || ||||||||||||||| ||||||||| ||||||| |||||||||||    
T  4546680 cattgctatccaagtgacaagaatgtcaagtgatctaacgaaaccttt 4546633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 98 - 241
Target Start/End: Complemental strand, 5871128 - 5870985
Alignment:
Q  98 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactg 197  Q
    |||||||||||||||| |||||||  || ||||||||||| ||||||||||  ||||||||||  ||||||| |||||||||||||||||||||||| ||    
T  5871128 ctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatctaatatttaataccataaacaatgagcggtatctagcaacacatcattg 5871029  T
Q  198 ctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    ||| ||||||||| ||||||||| ||||||||||||||||||||    
T  5871028 ctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 5870985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 98 - 241
Target Start/End: Original strand, 17299550 - 17299693
Alignment:
Q  98 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactg 197  Q
    |||||||||||||||| |||||||  || ||||||||||| ||||||||||  ||||||||||  ||||||| |||||||||||||||||||||||| ||    
T  17299550 ctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatctaatatttaataccataaacaatgagcggtatctagcaacacatcattg 17299649  T
Q  198 ctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    ||| ||||||||| ||||||||| ||||||||||||||||||||    
T  17299650 ctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 17299693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 98 - 241
Target Start/End: Original strand, 18110634 - 18110777
Alignment:
Q  98 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactg 197  Q
    |||||||||||||||| |||||||  || ||||||||||| ||||||||||  ||||||||||  ||||||| |||||||||||||||||||||||| ||    
T  18110634 ctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatctaatatttaataccataaacaatgagcggtatctagcaacacatcattg 18110733  T
Q  198 ctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    ||| ||||||||| ||||||||| ||||||||||||||||||||    
T  18110734 ctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 18110777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 93 - 241
Target Start/End: Original strand, 4675569 - 4675717
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||| |||||||||||||||| |||||||  || ||||||||||| ||||||||||  |||| |||||  ||||||| ||||||||||||||||||||||    
T  4675569 ctgttctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatctaatatctaataccataaacaatgagcggtatctagcaacacat 4675668  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    || ||||| ||||||||| ||||||||| ||||||||||||||||||||    
T  4675669 cattgctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 4675717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 93 - 241
Target Start/End: Complemental strand, 18163878 - 18163730
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||| |||||||||||||||| |||||||  || ||||||||||| ||||||||||  |||| |||||  ||||||| ||||||||||||||||||||||    
T  18163878 ctgttctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatctaatatctaataccataaacaatgagcggtatctagcaacacat 18163779  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    || ||||| ||||||||| ||||||||| ||||||||||||||||||||    
T  18163778 cattgctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 18163730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 93 - 241
Target Start/End: Complemental strand, 20244653 - 20244505
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||| |||||||||||||||| |||||||  || ||||||||||| ||||||||||  |||| |||||  ||||||| ||||||||||||||||||||||    
T  20244653 ctgttctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatctaatatctaataccataaacaatgagcggtatctagcaacacat 20244554  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    || ||||| ||||||||| ||||||||| ||||||||||||||||||||    
T  20244553 cattgctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 20244505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 93 - 240
Target Start/End: Complemental strand, 1942407 - 1942260
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||| ||||||||||||||||||||||||  || |||||| |||||||||||||||  |||||||||| |||||||| ||||||||||||||||||||||    
T  1942407 ctgttctttgtgtgtgaccctataggttctagtcacgttgacaataatattaaatctaatatttaatactataaacaatgagcggtatctagcaacacat 1942308  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctgacgaaaccttt 240  Q
    || ||||| ||||||||  ||||||||| |||||||||  ||||||||    
T  1942307 cattgctacccaagtgaaaagaatgtcaagtgatctgaaaaaaccttt 1942260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 103 - 236
Target Start/End: Original strand, 30040084 - 30040217
Alignment:
Q  103 tgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctatc 202  Q
    |||||||||||||||||||  || || |||||||||||||||| ||  |||||||||| |||||||| |||| ||||||||||||||||||| |||||||    
T  30040084 tgtgtgaccctataggttctagtcacattggcaataatattaagtctaatatttaatactataaacaatgagtggtatctagcaacacatcattgctatc 30040183  T
Q  203 caagtgacgagaatgtcatgtgatctgacgaaac 236  Q
    |||||||| ||||||||| |||||||||||||||    
T  30040184 caagtgacaagaatgtcaagtgatctgacgaaac 30040217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 98 - 241
Target Start/End: Original strand, 3368614 - 3368757
Alignment:
Q  98 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactg 197  Q
    |||||||||| ||||| |||||||  || ||||||||||| ||||||||||  ||||||||||  ||||||| |||||||||||||||||| ||||| ||    
T  3368614 ctttgtgtgtaaccctttaggttctagtcacgttggcaatgatattaaatctaatatttaataccataaacaatgagcggtatctagcaacgcatcattg 3368713  T
Q  198 ctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    ||| ||||||||| ||||||||| ||||||||||||||||||||    
T  3368714 ctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 3368757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 24701763 - 24701653
Alignment:
Q  130 ttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctg 229  Q
    |||| ||||||||||||||| | |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| | ||||||||||||||||    
T  24701763 ttggaaataatattaaatcaaacatttaatattataaacagtgagtggtatctaacaacacatcactgctatccaagtgacaaaaatgtcatgtgatctg 24701664  T
Q  230 acgaaaccttt 240  Q
    | |||||||||    
T  24701663 aagaaaccttt 24701653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 99 - 240
Target Start/End: Complemental strand, 19363121 - 19362980
Alignment:
Q  99 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgc 198  Q
    ||||||| ||||||||||| |||  |  ||||||||||||||||||||||  |||||||| |||||||| ||||||||||||||||||||||||||||||    
T  19363121 tttgtgtatgaccctatagattctagccacgttggcaataatattaaatctaatatttaacattataaatagtgagcggtatctagcaacacatcactgc 19363022  T
Q  199 tatccaagtgacgagaatgtcatgtgatctgacgaaaccttt 240  Q
    ||||||||| || ||||||||| ||| ||| |||||| ||||    
T  19363021 tatccaagttacaagaatgtcaagtgctctaacgaaatcttt 19362980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 100 - 240
Target Start/End: Original strand, 5524582 - 5524722
Alignment:
Q  100 ttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgct 199  Q
    ||||||||| || |||||||||  |||| ||||||||||||||||||||   |||||||||||||||| |||||||||||||||| |||||||||||  |    
T  5524582 ttgtgtgtgtccttataggttcttgtaatgttggcaataatattaaatcttgtatttaatattataaatagtgagcggtatctagtaacacatcactctt 5524681  T
Q  200 atccaagtgacgagaatgtcatgtgatctgacgaaaccttt 240  Q
    |||||||||||  |||| ||| |||||||||||||||||||    
T  5524682 atccaagtgacaggaatttcaagtgatctgacgaaaccttt 5524722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 100 - 240
Target Start/End: Complemental strand, 9538669 - 9538529
Alignment:
Q  100 ttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgct 199  Q
    ||||||||||||||||| ||||   | | ||||||||||||||||||||   |||||||||||||||||| ||||||||||||||||||| ||||||| |    
T  9538669 ttgtgtgtgaccctatatgttcttttcaagttggcaataatattaaatcttgtatttaatattataaacaatgagcggtatctagcaacagatcactgtt 9538570  T
Q  200 atccaagtgacgagaatgtcatgtgatctgacgaaaccttt 240  Q
    ||||||||||| |||| ||||  ||||||||||||||||||    
T  9538569 atccaagtgacaagaacgtcaactgatctgacgaaaccttt 9538529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 99 - 240
Target Start/End: Complemental strand, 19374057 - 19373916
Alignment:
Q  99 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgc 198  Q
    ||||||| ||||||||||| |||  |  |||||  |||||||||||||||  ||||||||||||||||| |||||||| |||||||||||||||||||||    
T  19374057 tttgtgtatgaccctatagattcttgccacgttaacaataatattaaatcctatatttaatattataaatagtgagcgatatctagcaacacatcactgc 19373958  T
Q  199 tatccaagtgacgagaatgtcatgtgatctgacgaaaccttt 240  Q
    || ||||||||| ||||||||| ||| ||| |||||||||||    
T  19373957 tacccaagtgacaagaatgtcaagtgctctaacgaaaccttt 19373916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 99 - 239
Target Start/End: Complemental strand, 11421698 - 11421558
Alignment:
Q  99 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgc 198  Q
    |||||||||||||| ||||||||  || |||||| |||||||||||||||   ||||||||||||||||||||||   |||| ||||||||||||| |||    
T  11421698 tttgtgtgtgaccccataggttctagtcacgttgccaataatattaaatctagtatttaatattataaacagtgatatgtatttagcaacacatcattgc 11421599  T
Q  199 tatccaagtgacgagaatgtcatgtgatctgacgaaacctt 239  Q
    || ||||||||| ||||||||| ||||| ||||||||||||    
T  11421598 tacccaagtgacaagaatgtcaagtgatatgacgaaacctt 11421558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 100 - 231
Target Start/End: Complemental strand, 5617105 - 5616975
Alignment:
Q  100 ttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgct 199  Q
    |||||||||||| |||||||||  |||||  || |||||||||||||||  |||||||||||||||||||||||   |||||||||||||||||||||||    
T  5617105 ttgtgtgtgaccttataggttcttgtaacagtgacaataatattaaatcttatatttaatattataaacagtga-ttgtatctagcaacacatcactgct 5617007  T
Q  200 atccaagtgacgagaatgtcatgtgatctgac 231  Q
    | ||||||||| ||||||| | ||||||||||    
T  5617006 acccaagtgacaagaatgtaaagtgatctgac 5616975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 32637195 - 32637058
Alignment:
Q  99 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgc 198  Q
    ||||| ||||||||| |||| ||  || | ||||||||||||||||||||  ||||||||||||||||||| || ||| ||||||||||||||||||| |    
T  32637195 tttgtttgtgaccctgtaggatcttgtcatgttggcaataatattaaatcttatatttaatattataaacaatgggcgatatctagcaacacatcactac 32637096  T
Q  199 tatccaagtgacgagaatgtcatgtgatctgacgaaac 236  Q
    || | ||||||| ||||||| |  |||| |||||||||    
T  32637095 tacctaagtgacaagaatgttaaatgatttgacgaaac 32637058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 81 - 152
Target Start/End: Original strand, 47388341 - 47388412
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacat 152  Q
    ||||| ||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  47388341 tctctcatctatctgtcatttgtgtgtgaccctataggttaccgtaacgttgacaataatattaaatcacat 47388412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 81 - 236
Target Start/End: Original strand, 23055637 - 23055790
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| || ||||||| || |||||||  |||||||||||||||| | ||| | ||||||||||||||| ||| ||||||||||||||| |||   | ||    
T  23055637 tctcttatttatctgttctatgtgtgtc-ccctataggttcccgtcatgttagtaataatattaaatcatata-ttaatattataaacaatgataagcat 23055734  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaac 236  Q
    ||||||| ||  |  || || |||||||||||||||||||| ||||||||||||||    
T  23055735 ctagcaatacgacgttgttacccaagtgacgagaatgtcatatgatctgacgaaac 23055790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 115 - 226
Target Start/End: Original strand, 9937429 - 9937540
Alignment:
Q  115 taggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctatccaagtgacgaga 214  Q
    ||||||| ||| | |||| |||||||||||||| |||| |||||||||||||||| |||| | ||||| | |||||| |  || || |||| ||||||||    
T  9937429 taggttctcgttatgttgacaataatattaaataacatctttaatattataaacaatgagtgatatcttgtaacacaccgttgttacccaaatgacgaga 9937528  T
Q  215 atgtcatgtgat 226  Q
    ||||||||||||    
T  9937529 atgtcatgtgat 9937540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 115 - 247
Target Start/End: Complemental strand, 36093023 - 36092887
Alignment:
Q  115 taggttcccgtaacgttggcaataatattaaatcacatatttaatattataaa----cagtgagcggtatctagcaacacatcactgctatccaagtgac 210  Q
    ||||||| | ||||||| ||||||||||||||||||||||  ||||||||||     || ||| |  |||||| |||||||||||| ||| | |||||||    
T  36093023 taggttctcataacgtttgcaataatattaaatcacatatgaaatattataattaagcaatgaacaatatctaacaacacatcactactacctaagtgac 36092924  T
Q  211 gagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
     ||||||||||||||| ||| ||||| ||| ||||||    
T  36092923 tagaatgtcatgtgatatgaagaaacatttatgtgat 36092887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 96 - 231
Target Start/End: Original strand, 24699667 - 24699801
Alignment:
Q  96 tcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcac 195  Q
    |||||||||||||||| | |||||||  ||||| |||  |||| || |||||   ||||||||||||||||| | |||  ||||||||||||||||||||    
T  24699667 tcctttgtgtgtgaccatgtaggttcttgtaacattgataatactaataaattttatatttaatattataaataatgactggtatctagcaacacatcac 24699766  T
Q  196 tgctatccaagtgacgagaatgtcatgtgatctgac 231  Q
      |||| ||| |||| |  |||||||||||||||||    
T  24699767 cactatacaattgac-aatatgtcatgtgatctgac 24699801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 145
Target Start/End: Original strand, 11483390 - 11483442
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaa 145  Q
    |||| |||||||||||||||| |||||||  || |||||||||||||||||||    
T  11483390 ctgttctttgtgtgtgaccctttaggttctagtcacgttggcaataatattaa 11483442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 241
Target Start/End: Complemental strand, 469237 - 469147
Alignment:
Q  150 catatttaatattataaacagtgagcggtatctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    ||||||||||||| |||| |||||| | ||||||||||||||||| |  |||| ||||  ||||||| |||  ||||||||| |||||||||    
T  469237 catatttaatattttaaatagtgagagatatctagcaacacatcattaatatctaagtaccgagaatatcacatgatctgac-aaacctttc 469147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 158
Target Start/End: Complemental strand, 22805879 - 22805837
Alignment:
Q  116 aggttcccgtaacgttggcaataatattaaatcacatatttaa 158  Q
    |||||| |||||||||| |||||||||||||||| ||||||||    
T  22805879 aggttctcgtaacgttgacaataatattaaatcaaatatttaa 22805837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 159; Significance: 9e-85; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 81 - 247
Target Start/End: Complemental strand, 6110874 - 6110708
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6110874 tctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 6110775  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  6110774 ctagcaacacatcactgctacccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 6110708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 81 - 247
Target Start/End: Original strand, 10571989 - 10572155
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10571989 tctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 10572088  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  10572089 ctagcaacacatcactgctacccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 10572155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 81 - 247
Target Start/End: Original strand, 10578753 - 10578919
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10578753 tctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 10578852  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  10578853 ctagcaacacatcactgctacccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 10578919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 81 - 247
Target Start/End: Original strand, 15600281 - 15600447
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15600281 tctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 15600380  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  15600381 ctagcaacacatcactgctacccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 15600447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 81 - 247
Target Start/End: Original strand, 15606826 - 15606992
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15606826 tctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 15606925  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  15606926 ctagcaacacatcactgctacccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 15606992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 81 - 247
Target Start/End: Original strand, 16481880 - 16482046
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16481880 tctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 16481979  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  16481980 caagcaacacatcactgctacccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 16482046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 81 - 247
Target Start/End: Complemental strand, 8491305 - 8491139
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8491305 tctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 8491206  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||||||||||| |||||||||||||||||||||| || ||||||||||||||||||||    
T  8491205 ctagcaacacatcactgctacccaagtgacgagaatgtcatgtaatatgacgaaacctttctgtgat 8491139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 81 - 247
Target Start/End: Complemental strand, 13212112 - 13211946
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  13212112 tctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattacatcacatatttaatattataaacagtgagcggtat 13212013  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  13212012 ctagcaacacatcactgctacccaagtgacgagaatgtcatgtgatctgacgaaatctttctgtgat 13211946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 81 - 247
Target Start/End: Original strand, 15356983 - 15357149
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  15356983 tctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataataataaatcacatatttagtattataaacagtgagcggtat 15357082  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  15357083 ctagcaacacatcactgctacccaagtgacgagaatgtcatgtgatctgacgaaacctttatgtgat 15357149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 81 - 247
Target Start/End: Original strand, 17780515 - 17780681
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  17780515 tctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggaaataatattaaatcacatatttaatattataaacagtgagcggtat 17780614  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||    
T  17780615 ctagcaacacatcactgctacccaagtgatgagaatgtcatgtgatctgacgaaacctttatgtgat 17780681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 87 - 247
Target Start/End: Complemental strand, 13517611 - 13517451
Alignment:
Q  87 atctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagca 186  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  13517611 atctatctgtcctttgtgtgtgaccctataggttcccgtaatgttggcaataatattaaatcacatatttaatattataaacagtgagtggtatctagca 13517512  T
Q  187 acacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  13517511 acacatcactgctacccaagtgacgagaatgccatgtgatctgacgaaacctttctgtgat 13517451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 81 - 247
Target Start/End: Original strand, 15341616 - 15341782
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  15341616 tctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataataataaatcacatatttagtattataaacagtgagcggtat 15341715  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||| |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  15341716 ctagcaccacatcgctgctacccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 15341782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 81 - 247
Target Start/End: Original strand, 1646918 - 1647084
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||    
T  1646918 tctctcatttatctgtccttagtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcattat 1647017  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    ||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  1647018 ctagcaacacaacactgctacccaagtgacgaaaatgtcatgtgatctgacgaaacctttctgtgat 1647084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 81 - 247
Target Start/End: Complemental strand, 17137163 - 17136997
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  17137163 tctctcatctatcttttctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacacatttaatattataaacagtgagcggtat 17137064  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||||||||||| |||||||||| |||| || |||||||||||||||||||||||||||    
T  17137063 ctagcaacacatcactgctacccaagtgacgtgaatttcttgtgatctgacgaaacctttctgtgat 17136997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 81 - 247
Target Start/End: Original strand, 23014757 - 23014923
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| ||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  23014757 tctctcatctatctgtcatttgtatgtgaccctataggttctcgtaacgttggcaataatattaaatcacgtatttaatattatagacagtgagcggtat 23014856  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  23014857 ctagcaacacatcactgctaaccaagtgacgagaatgttatgtgatctgacgaaacctttctgtgat 23014923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 89 - 240
Target Start/End: Original strand, 17197160 - 17197311
Alignment:
Q  89 ctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaac 188  Q
    |||||||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  17197160 ctatctgtcctttgtgtgtgaccctatatgttctcgtaacgttgacaataatattaaatcacatatttaatattataaaaagtgagtggtatctagcaac 17197259  T
Q  189 acatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaaccttt 240  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  17197260 acatcactgctacccaagtgacgagaatgtcatgtgatctgacaaaaccttt 17197311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 93 - 241
Target Start/End: Complemental strand, 21034955 - 21034807
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||| ||||||||||||||||||||||||  || ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  21034955 ctgttctttgtgtgtgaccctataggttctagtcacgttggcaataatattaaatctgatatttaatattataaacaatgagcggtatctagcaacacat 21034856  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    || ||||| ||||||||| ||||||||| ||||||||||||||||||||    
T  21034855 cattgctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 21034807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 93 - 241
Target Start/End: Complemental strand, 21399509 - 21399361
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||| ||||||||||||||||||||||||  || ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  21399509 ctgttctttgtgtgtgaccctataggttctagtcacgttggcaataatattaaatctgatatttaatattataaacaatgagcggtatctagcaacacat 21399410  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    || ||||| ||||||||| ||||||||| ||||||||||||||||||||    
T  21399409 cattgctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 21399361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 93 - 241
Target Start/End: Original strand, 15846121 - 15846269
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||| ||||||||||||||||||||||||  || | ||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  15846121 ctgttctttgtgtgtgaccctataggttctagtcatgttggcaataatattaaatctgatatttaatattataaacaatgagcggtatctagcaacacat 15846220  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    || ||||| ||||||||| ||||||||| ||||||||||||||||||||    
T  15846221 cattgctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 15846269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 93 - 241
Target Start/End: Complemental strand, 28088823 - 28088675
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||| ||||||||||||||||||||||||  || ||||||||||||||||||||||  |||||||||  |||||| ||| ||||||||||||||||||||    
T  28088823 ctgttctttgtgtgtgaccctataggttctagtcacgttggcaataatattaaatctaatatttaatgctataaatagtaagcggtatctagcaacacat 28088724  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    || ||||| ||||||||| ||||||||| ||||||||||||||||||||    
T  28088723 cattgctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 28088675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 98 - 241
Target Start/End: Complemental strand, 12300621 - 12300478
Alignment:
Q  98 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactg 197  Q
    |||||||||||||||| |||||||  || ||||||||||| ||||||||||  ||||||||||  ||||||| |||||||||||||||||||||||| ||    
T  12300621 ctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatctaatatttaataccataaacaatgagcggtatctagcaacacatcattg 12300522  T
Q  198 ctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    ||| ||||||||| ||||||||| ||||||||||||||||||||    
T  12300521 ctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 12300478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 93 - 240
Target Start/End: Original strand, 15316760 - 15316907
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||| ||||||||||||||||||||||||  || ||||||||||||||||||||||  |||||||||| |||||| | ||||||||||||||||||||||    
T  15316760 ctgttctttgtgtgtgaccctataggttctagtcacgttggcaataatattaaatctaatatttaatactataaataatgagcggtatctagcaacacat 15316859  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctgacgaaaccttt 240  Q
    || |||||  |||||||| ||||||||| ||||| |||||||||||||    
T  15316860 cattgctacacaagtgacaagaatgtcaagtgatatgacgaaaccttt 15316907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 155 - 247
Target Start/End: Complemental strand, 18520711 - 18520619
Alignment:
Q  155 ttaatattataaacagtgagcggtatctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  18520711 ttaatattataaacagggagcggtatctagcaacacatcactgctacccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 18520619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 93 - 241
Target Start/End: Complemental strand, 55427737 - 55427589
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||| |||||||||||||||| |||||||  || ||||||||||| ||||||||||  |||| |||||  ||||||| ||||||||||||||||||||||    
T  55427737 ctgttctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatctaatatctaataccataaacaatgagcggtatctagcaacacat 55427638  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    || ||||| ||||||||| ||||||||| ||||||||||||||||||||    
T  55427637 cattgctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 55427589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 98 - 241
Target Start/End: Original strand, 20147145 - 20147288
Alignment:
Q  98 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacat-atttaatattataaacagtgagcggtatctagcaacacatcact 196  Q
    |||||||||||||||| |||||||  || ||||||||||| |||||||||| ||| ||||||||| ||||||| |||||||||||||||||||||||| |    
T  20147145 ctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatc-catcatttaatatcataaacaatgagcggtatctagcaacacatcatt 20147243  T
Q  197 gctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    |||| ||||||||| ||||||||| ||||||||||||||| ||||    
T  20147244 gctacccaagtgacaagaatgtcaagtgatctgacgaaacatttc 20147288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 93 - 235
Target Start/End: Original strand, 25978312 - 25978454
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||| ||||||||||||||||||||||||  || ||||||||||||||||||||||  |||||||||| |||||||| ||||||||||||||||||||||    
T  25978312 ctgttctttgtgtgtgaccctataggttctagtcacgttggcaataatattaaatctaatatttaatactataaacaatgagcggtatctagcaacacat 25978411  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctgacgaaa 235  Q
    || ||  | ||||||||| ||||| ||| ||||| ||||||||    
T  25978412 cattgtcacccaagtgacaagaatatcaagtgatttgacgaaa 25978454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 99 - 240
Target Start/End: Complemental strand, 15538247 - 15538106
Alignment:
Q  99 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgc 198  Q
    ||||||||||||||||||| |||  |  || |||||||||||||||||||  ||||| ||||||||||| |||||||||||||||||||||||||||| |    
T  15538247 tttgtgtgtgaccctatagtttcttgccacattggcaataatattaaatcttatattcaatattataaaaagtgagcggtatctagcaacacatcactac 15538148  T
Q  199 tatccaagtgacgagaatgtcatgtgatctgacgaaaccttt 240  Q
    || |||||| || ||||||||| ||||| |||||||||||||    
T  15538147 tacccaagtaacaagaatgtcaagtgatatgacgaaaccttt 15538106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 104 - 240
Target Start/End: Complemental strand, 26816998 - 26816862
Alignment:
Q  104 gtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctatcc 203  Q
    ||||||||||||| ||||  |  |||||| ||| |||||||||||  ||||||||||||||||||| |||||||||||||||||||||||| ||||| |     
T  26816998 gtgtgaccctataagttcttgccacgttgacaacaatattaaatcttatatttaatattataaacaatgagcggtatctagcaacacatcattgctacca 26816899  T
Q  204 aagtgacgagaatgtcatgtgatctgacgaaaccttt 240  Q
    ||||||| ||||||||| ||||| |||| ||||||||    
T  26816898 aagtgacaagaatgtcaagtgatatgacaaaaccttt 26816862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 107 - 240
Target Start/End: Complemental strand, 14147723 - 14147590
Alignment:
Q  107 tgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctatccaag 206  Q
    |||||||||| ||||  || |||||| ||||||||||||||   ||||||||||||||||||| |||||  ||||||||| ||||||| ||||| |||||    
T  14147723 tgaccctatatgttctagtcacgttgacaataatattaaatttaatatttaatattataaacaatgagcaatatctagcatcacatcattgctacccaag 14147624  T
Q  207 tgacgagaatgtcatgtgatctgacgaaaccttt 240  Q
    |||| ||||||||| ||||| |||||||||||||    
T  14147623 tgacaagaatgtcaagtgatatgacgaaaccttt 14147590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 127 - 234
Target Start/End: Complemental strand, 25801043 - 25800936
Alignment:
Q  127 acgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctatccaagtgacgagaatgtcatgtgat 226  Q
    |||||| ||||||||||||||||||||| | |||| |||||| |||| || ||| ||||||||||||||||||| |||| ||||||||||||||||||||    
T  25801043 acgttgacaataatattaaatcacatatgtgatataataaacggtgaacgatatttagcaacacatcactgctacccaaatgacgagaatgtcatgtgat 25800944  T
Q  227 ctgacgaa 234  Q
     |||||||    
T  25800943 ttgacgaa 25800936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 138 - 240
Target Start/End: Complemental strand, 11788260 - 11788158
Alignment:
Q  138 aatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacc 237  Q
    |||||| ||||  |||||||||| |||||||| |||||| ||||||||||||||| | ||||| ||||||||| | ||||||| ||||||||||||||||    
T  11788260 aatattgaatctaatatttaatactataaacaatgagcgatatctagcaacacattattgctacccaagtgacaataatgtcaagtgatctgacgaaacc 11788161  T
Q  238 ttt 240  Q
    |||    
T  11788160 ttt 11788158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 103 - 247
Target Start/End: Complemental strand, 9505095 - 9504951
Alignment:
Q  103 tgtgtgaccctataggttcc-cgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctat 201  Q
    ||||||||| | |||||| | ||||| |||| ||||||||||||||||||||||||| ||||||| ||  ||||  ||| ||||||||||||| |||||     
T  9505095 tgtgtgaccttgtaggtttctcgtaatgttgacaataatattaaatcacatatttaaaattataatcatggagcaatatgtagcaacacatcagtgctac 9504996  T
Q  202 ccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||| || ||||||| |||||||||  |||||||| ||||||    
T  9504995 ccaagtgatgaaaatgtcacgtgatctga-aaaacctttatgtgat 9504951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 124 - 224
Target Start/End: Original strand, 35199085 - 35199185
Alignment:
Q  124 gtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctatccaagtgacgagaatgtcatgt 223  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||   || | | |||||||| |||||| | ||||| || |||||||||||||||||    
T  35199085 gtaacgttggcaataatattaaatcatatatttaatattatatacatcaagagatgtctagcaatacatcaattctatctaaatgacgagaatgtcatgt 35199184  T
Q  224 g 224  Q
    |    
T  35199185 g 35199185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 81 - 132
Target Start/End: Original strand, 19081816 - 19081867
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttg 132  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  19081816 tctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttg 19081867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 126 - 226
Target Start/End: Original strand, 9250146 - 9250246
Alignment:
Q  126 aacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctatccaagtgacgagaatgtcatgtga 225  Q
    ||||||| |||||||||||||| ||| |||||||||||||||||   |   |||||||| ||||| ||||| |||||||| |||||||||| ||||||||    
T  9250146 aacgttgacaataatattaaataacacatttaatattataaacataaaatagtatctagtaacacgtcacttctatccaattgacgagaatttcatgtga 9250245  T
Q  226 t 226  Q
    |    
T  9250246 t 9250246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 124 - 240
Target Start/End: Complemental strand, 29925747 - 29925621
Alignment:
Q  124 gtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat----------ctagcaacacatcactgctatccaagtgacgag 213  Q
    ||||| ||| |||| ||||||||||||||||||||||||||||||| ||||  ||||          ||||||||||||||||||||  ||| |||||||    
T  29925747 gtaacattgacaatgatattaaatcacatatttaatattataaacattgagaagtattttcctatatctagcaacacatcactgctactcaaatgacgag 29925648  T
Q  214 aatgtcatgtgatctgacgaaaccttt 240  Q
    ||| ||||||| | |||| ||||||||    
T  29925647 aatttcatgtgttatgacaaaaccttt 29925621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 124 - 240
Target Start/End: Complemental strand, 29974901 - 29974775
Alignment:
Q  124 gtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat----------ctagcaacacatcactgctatccaagtgacgag 213  Q
    ||||| ||| |||| ||||||||||||||||||||||||||||||| ||||  ||||          ||||||||||||||||||||  ||| |||||||    
T  29974901 gtaacattgacaatgatattaaatcacatatttaatattataaacattgagaagtattttcctatatctagcaacacatcactgctactcaaatgacgag 29974802  T
Q  214 aatgtcatgtgatctgacgaaaccttt 240  Q
    ||| ||||||| | |||| ||||||||    
T  29974801 aatttcatgtgttatgacaaaaccttt 29974775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 209 - 247
Target Start/End: Complemental strand, 13249289 - 13249251
Alignment:
Q  209 acgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  13249289 acgagaatgtcatgtgatctgacgaaatctttctgtgat 13249251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 24252355 - 24252404
Alignment:
Q  177 gtatctagcaacacatcactgctatccaagtgacgagaatgtcatgtgat 226  Q
    ||||||| |||||||| |||  ||||||||||| ||||||||||||||||    
T  24252355 gtatctaacaacacattactcatatccaagtgaagagaatgtcatgtgat 24252404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 174
Target Start/End: Complemental strand, 35543618 - 35543545
Alignment:
Q  102 gtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcaca-tatttaatattataaacagtgag 174  Q
    |||||||||| | ||||||| ||||| |||| |||||||||||| | ||| | |||||||||||||| ||||||    
T  35543618 gtgtgtgaccttgtaggttcacgtaatgttgacaataatattaagttacactgtttaatattataaatagtgag 35543545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 159; Significance: 9e-85; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 81 - 247
Target Start/End: Complemental strand, 18252840 - 18252674
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18252840 tctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 18252741  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  18252740 ctagcaacacatcactgctacccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 18252674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 81 - 247
Target Start/End: Original strand, 18531911 - 18532077
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18531911 tctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 18532010  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  18532011 ctagcaacacatcactgctacctaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 18532077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 81 - 247
Target Start/End: Original strand, 27309974 - 27310140
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27309974 tctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 27310073  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||    
T  27310074 ctagcaacacatcactgctacccaagtgacgagaatgtcatgtgatatgacgaaacctttttgtgat 27310140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 81 - 247
Target Start/End: Original strand, 27130807 - 27130973
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27130807 tctctcatctatctgtcctttgtgtgtgaccctataggttcccataacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 27130906  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||| |||||    
T  27130907 ctagcaacacatcactgctacccaagtgacgagaatgtcatgtgatatgacaaaacctttccgtgat 27130973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 81 - 247
Target Start/End: Original strand, 16358432 - 16358598
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||    
T  16358432 tctctcatctatctgtcctttgtttgtgaccctataggttcccgtaacgttggcaataatattaaatctcatatttaatactataaacagtgagcgatat 16358531  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||    
T  16358532 ctagcaacacatcactgctatccaagtgacgagaatatcatgtgatatgacgaaacctttccgtgat 16358598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 87 - 247
Target Start/End: Original strand, 27276963 - 27277123
Alignment:
Q  87 atctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagca 186  Q
    ||||||||||| |||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  27276963 atctatctgtcatttgtgtgtgaccctataagttctcgtaacgttgacaataatattaaatcacatatttaatattataaacagtgagcggtatctagta 27277062  T
Q  187 acacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||| ||| ||||||||||||||||||||||||||||| ||||||||| ||||||    
T  27277063 acacatcactcctacccaagtgacgagaatgtcatgtgatctgatgaaacctttttgtgat 27277123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 81 - 240
Target Start/End: Original strand, 36816032 - 36816191
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||  |||    
T  36816032 tctctcatctatctgtcctttgtgtgtgaccctatagattcccgtaacattgacaataatattaaatcacatatttaatattataaacagtgagcaatat 36816131  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaaccttt 240  Q
    |||||||||||||| || ||  ||||||||||||||||||||||||||||||||||||||    
T  36816132 ctagcaacacatcaatgttactcaagtgacgagaatgtcatgtgatctgacgaaaccttt 36816191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 93 - 241
Target Start/End: Original strand, 19706024 - 19706172
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||| ||||||||||||||||||||||||  || ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  19706024 ctgttctttgtgtgtgaccctataggttctagtcacgttggcaataatattaaatctgatatttaatattataaacaatgagcggtatctagcaacacat 19706123  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    || ||||| ||||||||| ||||||||| ||||||||||||||||||||    
T  19706124 cattgctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 19706172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 93 - 241
Target Start/End: Original strand, 28134308 - 28134456
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||| ||||||||||||||||||||||||  || ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  28134308 ctgttctttgtgtgtgaccctataggttctggtcacgttggcaataatattaaatctgatatttaatattataaacaatgagcggtatctagcaacacat 28134407  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    || ||||| ||||||||| ||||||||| ||||||||||||||||||||    
T  28134408 cattgctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 28134456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 93 - 241
Target Start/End: Complemental strand, 9456832 - 9456684
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||| |||||||||||||||| |||||||  || ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  9456832 ctgttctttgtgtgtgaccctttaggttctagtcacgttggcaataatattaaatctaatatttaatattataaacaatgagcggtatctagcaacacat 9456733  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    ||  |||| ||||||||| ||||||||| ||||||||||||||||||||    
T  9456732 catggctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 9456684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 93 - 241
Target Start/End: Complemental strand, 9460928 - 9460780
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||| |||||||||||||||| |||||||  || ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  9460928 ctgttctttgtgtgtgaccctttaggttctagtcacgttggcaataatattaaatctaatatttaatattataaacaatgagcggtatctagcaacacat 9460829  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    ||  |||| ||||||||| ||||||||| ||||||||||||||||||||    
T  9460828 catggctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 9460780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 93 - 241
Target Start/End: Original strand, 20779231 - 20779379
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||| |||||||||||||||| |||||||  || ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  20779231 ctgttctttgtgtgtgaccctttaggttctagtcacgttggcaataatattaaatctaatatttaatattataaacaatgagcggtatctagcaacacat 20779330  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    ||  |||| ||||||||| ||||||||| ||||||||||||||||||||    
T  20779331 catggctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 20779379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 93 - 241
Target Start/End: Complemental strand, 22613208 - 22613061
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||| ||||||||||||||||||||||||  || ||||||||||||||||||||||  ||||||| ||||||||||| ||||||||||||||||||||||    
T  22613208 ctgttctttgtgtgtgaccctataggttctagtcacgttggcaataatattaaatctgatattta-tattataaacaatgagcggtatctagcaacacat 22613110  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    || ||||| ||||||||| ||||||||| ||||||||||||||||||||    
T  22613109 cattgctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 22613061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 93 - 241
Target Start/End: Original strand, 47667070 - 47667218
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||| |||||||||||||||| |||||||  || ||||||||||||||||||| ||  ||||||||||||||||||| ||||||||||||||||||||||    
T  47667070 ctgttctttgtgtgtgaccctttaggttctagtcacgttggcaataatattaattctgatatttaatattataaacaatgagcggtatctagcaacacat 47667169  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    || ||||| ||||||||| ||||||||| ||||||||||||||||||||    
T  47667170 cattgctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 47667218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 81 - 247
Target Start/End: Original strand, 22641279 - 22641439
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |||    
T  22641279 tctctcatctatctgtactttgtgtgtgaccctataggttctcgtaacgttggcaataatatgaaatcacatgtttaatattataaacagtgagcgatat 22641378  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    || |||| ||||| |||||| ||||||      ||| ||||||||| ||| |||||||||| |||||    
T  22641379 ctcgcaaaacatcgctgctacccaagt------aatttcatgtgatatgatgaaacctttcagtgat 22641439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 98 - 241
Target Start/End: Original strand, 33283447 - 33283590
Alignment:
Q  98 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactg 197  Q
    |||||||||||||||| |||||||  || ||||||||||| ||||||||||  |||||||||| |||||||| |||||||||||||||||||||||| ||    
T  33283447 ctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatctaatatttaatactataaacaatgagcggtatctagcaacacatcattg 33283546  T
Q  198 ctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    ||| ||||||||| ||||||||| || |||||||||||||||||    
T  33283547 ctacccaagtgacaagaatgtcaagtaatctgacgaaacctttc 33283590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 93 - 241
Target Start/End: Complemental strand, 14482606 - 14482458
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||| |||||||||||||||| |||||||  || ||||||||||| ||||||||||  |||| |||||  ||||||| ||||||||||||||||||||||    
T  14482606 ctgttctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatctaatatctaataccataaacaatgagcggtatctagcaacacat 14482507  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    || ||||| ||||||||| ||||||||| ||||||||||||||||||||    
T  14482506 cattgctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 14482458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 98 - 241
Target Start/End: Original strand, 22669848 - 22669991
Alignment:
Q  98 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacat-atttaatattataaacagtgagcggtatctagcaacacatcact 196  Q
    |||||||||||||||| |||||||  || ||||||||||| |||||||||| ||| ||||||||| ||||||| |||||||||||||||||||||||| |    
T  22669848 ctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatc-catcatttaatatcataaacaatgagcggtatctagcaacacatcatt 22669946  T
Q  197 gctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    |||| ||||||||| ||||||||| ||||||||||||||||||||    
T  22669947 gctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 22669991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 103 - 236
Target Start/End: Complemental strand, 634645 - 634513
Alignment:
Q  103 tgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctatc 202  Q
    |||||||||||||||||||  || ||||||||||||||||||||||  ||||| |||| |||||||| |||||||||||||||||||||||| ||||| |    
T  634645 tgtgtgaccctataggttctagtcacgttggcaataatattaaatctaatatt-aatactataaacaatgagcggtatctagcaacacatcattgctacc 634547  T
Q  203 caagtgacgagaatgtcatgtgatctgacgaaac 236  Q
     ||||||| |||||||||||||||||||||||||    
T  634546 aaagtgacaagaatgtcatgtgatctgacgaaac 634513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 98 - 241
Target Start/End: Original strand, 42816580 - 42816723
Alignment:
Q  98 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacat-atttaatattataaacagtgagcggtatctagcaacacatcact 196  Q
    |||||||||||||||| |||||||  |  ||||||||||| |||||||||| ||| ||||||||| ||||||| |||||||||||||||||||||||| |    
T  42816580 ctttgtgtgtgaccctttaggttctaggcacgttggcaatgatattaaatc-catcatttaatatcataaacaatgagcggtatctagcaacacatcatt 42816678  T
Q  197 gctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    |||| ||||||||| ||||||||| ||||||||||||||||||||    
T  42816679 gctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 42816723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 93 - 241
Target Start/End: Original strand, 43801950 - 43802098
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||| ||||||||||||||| ||||||||  || |||||||||||||||||||||   |||||||| |||||||||| |||||||||||||| |||||||    
T  43801950 ctgttctttgtgtgtgacccaataggttctagtcacgttggcaataatattaaatatgatatttaaaattataaacaatgagcggtatctagtaacacat 43802049  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    || ||||| ||||||||| ||||||| | ||||||| ||||||||||||    
T  43802050 cattgctacccaagtgacaagaatgttaagtgatctaacgaaacctttc 43802098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 98 - 241
Target Start/End: Original strand, 20390830 - 20390973
Alignment:
Q  98 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactg 197  Q
    |||||||||||||||| |||||||  || || |||||||| ||||||||||  ||||||||||  ||||||| |||||||||| ||||||||||||| ||    
T  20390830 ctttgtgtgtgaccctttaggttctagtcacattggcaatgatattaaatctaatatttaataccataaacaatgagcggtatgtagcaacacatcattg 20390929  T
Q  198 ctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    ||| ||||||||| ||||||||| ||||||||||||||||||||    
T  20390930 ctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 20390973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 8728374 - 8728237
Alignment:
Q  99 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgc 198  Q
    |||||||||||||| ||| ||||  || || |||||||||||||||||||  ||||||||||||||||||||||||| |||||||| ||||||||| |||    
T  8728374 tttgtgtgtgaccccataagttctagtcacattggcaataatattaaatctaatatttaatattataaacagtgagcagtatctaggaacacatcattgc 8728275  T
Q  199 tatccaagtgacgagaatgtcatgtgatctgacgaaac 236  Q
    || ||||||||  ||||||||| |||||||||||||||    
T  8728274 tacccaagtgaaaagaatgtcaagtgatctgacgaaac 8728237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 99 - 245
Target Start/End: Original strand, 31234339 - 31234485
Alignment:
Q  99 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgc 198  Q
    ||||||||||||||| ||||||   || |||||| |||||| |||||||   |||||||||||||||||| ||||| |||||||| ||||||||||||||    
T  31234339 tttgtgtgtgaccctgtaggttatggtcacgttgacaataaaattaaatattatatttaatattataaacggtgagtggtatctaacaacacatcactgc 31234438  T
Q  199 tatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtg 245  Q
    || | |||| || ||||||||||||||||||||||||||||| ||||    
T  31234439 taccaaagtcacaagaatgtcatgtgatctgacgaaacctttatgtg 31234485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 98 - 210
Target Start/End: Complemental strand, 35936036 - 35935924
Alignment:
Q  98 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactg 197  Q
    |||||||||||| |||||||||||  || ||||||||||||||||||||||  |||||||||| |||||||| ||| |||||||||||||||||||| ||    
T  35936036 ctttgtgtgtgatcctataggttctagtcacgttggcaataatattaaatctaatatttaataatataaacaatgaacggtatctagcaacacatcattg 35935937  T
Q  198 ctatccaagtgac 210  Q
     || |||||||||    
T  35935936 ttacccaagtgac 35935924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 12006002 - 12006110
Alignment:
Q  138 aatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacc 237  Q
    |||| ||||| |||||||||||| |||| |||||||||||||||||||||||||||||| ||| |||||||||||||||  || ||||| |||| |||||    
T  12006002 aataataaattacatatttaatagtatatacagtgagcggtatctagcaacacatcactactacccaagtgacgagaataccacgtgatatgac-aaacc 12006100  T
Q  238 tttctgtgat 247  Q
    ||||||||||    
T  12006101 tttctgtgat 12006110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 125 - 226
Target Start/End: Original strand, 10852045 - 10852146
Alignment:
Q  125 taacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctatccaagtgacgagaatgtcatgtg 224  Q
    |||| ||| ||||||| |||||| ||| |||||||||||||||| ||||||||||||||| ||||||||| |||||  ||| ||| |||||| |||||||    
T  10852045 taaccttgacaataatgttaaatgacacatttaatattataaaccgtgagcggtatctagaaacacatcattgctactcaattgatgagaatatcatgtg 10852144  T
Q  225 at 226  Q
    ||    
T  10852145 at 10852146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 99 - 228
Target Start/End: Complemental strand, 35132648 - 35132520
Alignment:
Q  99 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgc 198  Q
    ||||| ||||||| | |||||||| | ||||||| ||||||||||||||   ||||||||||| ||||| |||||||||||||||||||||||  | |||    
T  35132648 tttgtatgtgaccgtgtaggttcctgcaacgttg-caataatattaaatattatatttaatatcataaatagtgagcggtatctagcaacacactaatgc 35132550  T
Q  199 tatccaagtgacgagaatgtcatgtgatct 228  Q
    ||  ||| |||| ||||| |||||||||||    
T  35132549 tactcaaatgacaagaatatcatgtgatct 35132520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 99 - 247
Target Start/End: Original strand, 12013712 - 12013851
Alignment:
Q  99 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgc 198  Q
    ||||||||||||||||||||||  ||    ||||| |||||||| |||| |  ||||||||||||||||||||||||  |||||||||| | |||||| |    
T  12013712 tttgtgtgtgaccctataggttatcgccttgttggaaataatatgaaatta--tatttaatattataaacagtgagcattatctagcaatatatcactac 12013809  T
Q  199 tatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    ||      ||||||||||||||||||||||||| |||||||| ||||||    
T  12013810 ta------tgacgagaatgtcatgtgatctgac-aaacctttatgtgat 12013851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 247
Target Start/End: Original strand, 9916247 - 9916343
Alignment:
Q  151 atatttaatattataaacagtgagcggtatctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    ||||||||||||||||| |||||| | |||||| ||||| ||||||  ||  |||||||| ||||||||| ||||||||| ||||| ||| ||||||    
T  9916247 atatttaatattataaatagtgagtgatatctaacaacaaatcactattaatcaagtgacaagaatgtcaagtgatctgatgaaacatttatgtgat 9916343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 105 - 183
Target Start/End: Original strand, 14234606 - 14234684
Alignment:
Q  105 tgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatcta 183  Q
    ||||||||| ||||||| ||| || | | |||||||||||||||||| ||||||||||||||||| ||| |||| ||||    
T  14234606 tgtgaccctgtaggttctcgtgacatcgacaataatattaaatcacacatttaatattataaacattgaacggtgtcta 14234684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 23507636 - 23507549
Alignment:
Q  153 atttaatattataaacagtgagcggtatctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaaccttt 240  Q
    |||||||| | |||||| | || |||||||||||||  ||||||||||  ||||||||  |||||||||||||| ||| |||||||||    
T  23507636 atttaataatttaaacaataagaggtatctagcaacctatcactgctacacaagtgacatgaatgtcatgtgatatgaagaaaccttt 23507549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 226
Target Start/End: Complemental strand, 19959554 - 19959499
Alignment:
Q  171 tgagcggtatctagcaacacatcactgctatccaagtgacgagaatgtcatgtgat 226  Q
    |||| ||||||||| |||| ||||||  ||| ||||||||||||||||||||||||    
T  19959554 tgagtggtatctagaaacatatcactattatacaagtgacgagaatgtcatgtgat 19959499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 169
Target Start/End: Complemental strand, 19819835 - 19819768
Alignment:
Q  101 tgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaaca 169  Q
    ||||||| ||||||||||||  ||| || |||| ||||||||||||| | ||| |||||||||||||||    
T  19819835 tgtgtgtaaccctataggttaacgtcacattggtaataatattaaatgatata-ttaatattataaaca 19819768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 169
Target Start/End: Original strand, 24301359 - 24301391
Alignment:
Q  137 taatattaaatcacatatttaatattataaaca 169  Q
    |||||||||||| ||||||||||||||||||||    
T  24301359 taatattaaatctcatatttaatattataaaca 24301391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 158; Significance: 4e-84; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 82 - 247
Target Start/End: Original strand, 21329646 - 21329811
Alignment:
Q  82 ctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatc 181  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21329646 ctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatc 21329745  T
Q  182 tagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  21329746 tagcaacacatcactgctacccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 21329811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 81 - 247
Target Start/End: Original strand, 22791255 - 22791421
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22791255 tctcttatctatctgtcctttgtgtgtgaccctataggttcccgtaactttggcaataatattaaatcacatatttaatattataaacagtgagcagtat 22791354  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    ||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||| |||||    
T  22791355 ctagcaacacatcactgttacccaaatgacgagaatgtcatgtgatctgacgaaacctttcagtgat 22791421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 87 - 247
Target Start/End: Complemental strand, 41662074 - 41661916
Alignment:
Q  87 atctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagca 186  Q
    ||||||||| ||||||||||  | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41662074 atctatctgccctttgtgtg--atcctataggttcccgtaacgttgacaataatattaaatcacatatttaatattataaacagtgagcggtatctagca 41661977  T
Q  187 acacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||    
T  41661976 acacatcactgctacacaagtgacgagaatgtcatgtgatctgacgaaacctttccgtgat 41661916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 93 - 241
Target Start/End: Original strand, 24249618 - 24249766
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||| |||||||||||||||| |||||||  || ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  24249618 ctgttctttgtgtgtgaccctttaggttctagtcacgttggcaataatattaaatctaatatttaatattataaacaatgagcggtatctagcaacacat 24249717  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    || ||||| ||||||||| ||||||||| ||||||||||||||||||||    
T  24249718 cattgctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 24249766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 93 - 241
Target Start/End: Complemental strand, 30175093 - 30174945
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||| |||||||||||||||| |||||||  || ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  30175093 ctgttctttgtgtgtgaccctttaggttctagtcacgttggcaataatattaaatctaatatttaatattataaacaatgagcggtatctagcaacacat 30174994  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    ||  |||| ||||||||| ||||||||| ||||||||||||||||||||    
T  30174993 catggctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 30174945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 93 - 241
Target Start/End: Original strand, 24228799 - 24228947
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||| ||||||||||||||||||||||||  || ||||||||||||||||||||||  |||||||||  |||||| ||| ||||||||||||||||||||    
T  24228799 ctgttctttgtgtgtgaccctataggttctagtcacgttggcaataatattaaatctaatatttaatgctataaatagtaagcggtatctagcaacacat 24228898  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    || ||||| ||||||||| ||||||||| ||||||||||||||||||||    
T  24228899 cattgctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 24228947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 81 - 236
Target Start/End: Complemental strand, 18620610 - 18620455
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| |||||| || ||||||||||||||||||||||||||  |||||||   ||||||||||||||||||||||||||||||||| ||||||||||||    
T  18620610 tctctcatctatatggcctttgtgtgtgaccctataggttcctataacgttaaaaataatattaaatcacatatttaatattataaatagtgagcggtat 18620511  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaac 236  Q
    |||| ||  |||||||| ||||||||||||||||| |||||||||| || ||||||    
T  18620510 ctagaaattcatcactgttatccaagtgacgagaacgtcatgtgatatgccgaaac 18620455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 100 - 240
Target Start/End: Complemental strand, 29801182 - 29801042
Alignment:
Q  100 ttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgct 199  Q
    |||||||||| | |||||||||  || ||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  29801182 ttgtgtgtgatcatataggttcttgtcacgttggcaataatattaaatcttatatttaatattataaacagtgagtggtatctagcaacacatcactgct 29801083  T
Q  200 atccaagtgacgagaatgtcatgtgatctgacgaaaccttt 240  Q
    | | ||||||| |||||||||  ||||||||||||||||||    
T  29801082 acctaagtgacaagaatgtcaattgatctgacgaaaccttt 29801042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 152 - 246
Target Start/End: Complemental strand, 18797245 - 18797151
Alignment:
Q  152 tatttaatattataaacagtgagcggtatctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtga 246  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  18797245 tatttaatattataaacagtgagcggtatctagcaacacatcattgctacccaagtgacgagaatgtcatgtgatctgacgaaacctttccgtga 18797151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 130 - 236
Target Start/End: Original strand, 15341623 - 15341729
Alignment:
Q  130 ttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctg 229  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||| |||| ||||||||| ||||||||| ||||||||    
T  15341623 ttggcaataatattaaatcatatatttaatattataaatagtgagcggtatctagcaacacaccaccgctacccaagtgacaagaatgtcaagtgatctg 15341722  T
Q  230 acgaaac 236  Q
    |||||||    
T  15341723 acgaaac 15341729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 99 - 240
Target Start/End: Original strand, 24763262 - 24763403
Alignment:
Q  99 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgc 198  Q
    ||||||||||||||  |||||||  || ||||||||||||||||||||||  ||||||||||||||||||| ||||| |||||||||||||||||| ||     
T  24763262 tttgtgtgtgaccccttaggttctagtcacgttggcaataatattaaatctaatatttaatattataaacaatgagccgtatctagcaacacatcattgt 24763361  T
Q  199 tatccaagtgacgagaatgtcatgtgatctgacgaaaccttt 240  Q
    ||| ||||||||  ||||||||| |||||||| |||||||||    
T  24763362 tattcaagtgacacgaatgtcatatgatctgatgaaaccttt 24763403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 99 - 240
Target Start/End: Complemental strand, 36270951 - 36270811
Alignment:
Q  99 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgc 198  Q
    ||||||||||||| | ||||||| ||||| |||| |||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||     
T  36270951 tttgtgtgtgaccatgtaggttctcgtaatgttgacaataatattaaattacatatttaatattataaatagtgagcgatatctagcaacacatcactgt 36270852  T
Q  199 tatccaagtgacgagaatgtcatgtgatctgacgaaaccttt 240  Q
     |   ||||||||||||||||| |||||||||| ||||||||    
T  36270851 aacttaagtgacgagaatgtcacgtgatctgac-aaaccttt 36270811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 138 - 240
Target Start/End: Original strand, 20687044 - 20687146
Alignment:
Q  138 aatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacc 237  Q
    |||||||||||  |||||||||| ||||||||||||||| ||||||||||||| ||||||||| |||| |||| ||||||||| ||||||| ||||||||    
T  20687044 aatattaaatcttatatttaatactataaacagtgagcgatatctagcaacacctcactgctacccaaatgacaagaatgtcaagtgatcttacgaaacc 20687143  T
Q  238 ttt 240  Q
    |||    
T  20687144 ttt 20687146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 19617145 - 19617009
Alignment:
Q  99 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgc 198  Q
    |||||||||||||  ||||||||  || | |||||||||||||||||| |  | ||||||||||||||||| | |||||||||||||||||||| | |||    
T  19617145 tttgtgtgtgaccacataggttctagtcatgttggcaataatattaaaactaa-atttaatattataaacaataagcggtatctagcaacacattattgc 19617047  T
Q  199 tatccaagtgacgagaatgtcatgtgatctgacgaaac 236  Q
    || ||||||||| ||||||||| ||||| |||||||||    
T  19617046 tacccaagtgacaagaatgtcaagtgatatgacgaaac 19617009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 101 - 247
Target Start/End: Complemental strand, 31848165 - 31848019
Alignment:
Q  101 tgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgcta 200  Q
    ||||||||||| | ||||||| |||||  |||| ||||| |||| || | |||||||| |||||||||||||||||||||||||||| |||||| | ||     
T  31848165 tgtgtgtgaccatgtaggttctcgtaatattggtaataacattatataatatatttaacattataaacagtgagcggtatctagcaatacatcattactt 31848066  T
Q  201 tccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    ||||||||||||| |||||| ||||  |||| |||| ||| ||||||    
T  31848065 tccaagtgacgaggatgtcaagtgacatgacaaaacttttatgtgat 31848019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 196
Target Start/End: Complemental strand, 12298542 - 12298448
Alignment:
Q  102 gtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcact 196  Q
    ||||||| || | ||||||| |||||||||| |||| ||||||||||||||||||||||||||||||| | || |||||||| ||||||||||||    
T  12298542 gtgtgtgcccttgtaggttctcgtaacgttgacaatgatattaaatcacatatttaatattataaacaataagtggtatctaacaacacatcact 12298448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 152 - 247
Target Start/End: Original strand, 22182960 - 22183054
Alignment:
Q  152 tatttaatattataaacagtgagcggtatctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||||||||| |||| ||||||||| ||||||| ||||||| |||||| || ||||||||| ||||||| || |||||||| ||||||    
T  22182960 tatttaatattataaacaatgagaggtatctagtaacacattactgctacccaagtaacaagaatgtcacgtgatcttac-aaacctttttgtgat 22183054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 134 - 247
Target Start/End: Original strand, 6991569 - 6991682
Alignment:
Q  134 caataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacga 233  Q
    ||||||||||||||   ||  ||||||||| | |||| ||||||||||||| ||||||||||  ||| | ||||||| |||||||||| |||||||||||    
T  6991569 caataatattaaattttattgttaatattacatacagagagcggtatctagaaacacatcacgactacctaagtgacaagaatgtcatatgatctgacga 6991668  T
Q  234 aacctttctgtgat 247  Q
    ||| |||| |||||    
T  6991669 aacttttccgtgat 6991682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 101 - 166
Target Start/End: Complemental strand, 18822799 - 18822734
Alignment:
Q  101 tgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataa 166  Q
    ||||||||| ||||||||||  |||| | ||| ||||||||||||| || ||||||||||||||||    
T  18822799 tgtgtgtgatcctataggttttcgtatcattgacaataatattaaaccatatatttaatattataa 18822734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 220
Target Start/End: Complemental strand, 41332880 - 41332799
Alignment:
Q  139 atattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctatccaagtgacgagaatgtca 220  Q
    ||||||||||   ||||| |||||||||| |||||| ||||||||||||||||||| || ||| ||| ||| | ||||||||    
T  41332880 atattaaatcttttatttgatattataaatagtgagtggtatctagcaacacatcattgttattcaaatgatgtgaatgtca 41332799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 199
Target Start/End: Complemental strand, 23662211 - 23662128
Alignment:
Q  116 aggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgct 199  Q
    |||||| | ||||||||  |||||||||||| ||||| |||||| ||||||| |||||  |||||||| |||||| ||| ||||    
T  23662211 aggttctcataacgttgagaataatattaaaccacatgtttaatgttataaatagtgataggtatctaacaacacgtcattgct 23662128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 236
Target Start/End: Original strand, 41315554 - 41315583
Alignment:
Q  207 tgacgagaatgtcatgtgatctgacgaaac 236  Q
    ||||||||||||||||||||||||||||||    
T  41315554 tgacgagaatgtcatgtgatctgacgaaac 41315583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 169
Target Start/End: Original strand, 40300567 - 40300634
Alignment:
Q  101 tgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaaca 169  Q
    ||||||||||| | ||| ||| |||||| |||  ||||||||||||||| ||| |||||||||||||||    
T  40300567 tgtgtgtgaccttgtagtttctcgtaacattgataataatattaaatcatata-ttaatattataaaca 40300634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 155; Significance: 2e-82; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 81 - 247
Target Start/End: Complemental strand, 6094933 - 6094767
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6094933 tctcttatctatctgtcctttgtgtgtgaccctataggttcctgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 6094834  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  6094833 ctagcaacacatcactgctacccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 6094767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 81 - 247
Target Start/End: Complemental strand, 21941475 - 21941309
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  21941475 tctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacattgacaataatattaaatcacatatttaatattataaacagtgagcggtat 21941376  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  21941375 ctagcaacacatcactgctacccaagtgacgagaatgtcatgtgatctgtcgaaacctttctgtgat 21941309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 87 - 247
Target Start/End: Complemental strand, 15327002 - 15326842
Alignment:
Q  87 atctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagca 186  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  15327002 atctatctgtcctttgtgtgtgaccctatatgttcccgtaacgttggcaataatattaaatcacgtatttaatattataaacagtgagcggtatctagca 15326903  T
Q  187 acacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||| |||| |||||    
T  15326902 acacatcactgctaccaaagtgacgagaatgtcatgtgatctgacgaaacatttccgtgat 15326842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 87 - 247
Target Start/End: Complemental strand, 15507371 - 15507211
Alignment:
Q  87 atctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagca 186  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  15507371 atctatctgtcctttgtgtgtgaccctatatgttcccgtaacgttggcaataatattaaatcacgtatttaatattataaacagtgagcggtatctagca 15507272  T
Q  187 acacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||| |||| |||||    
T  15507271 acacatcactgctaccaaagtgacgagaatgtcatgtgatctgacgaaacatttccgtgat 15507211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 81 - 247
Target Start/End: Complemental strand, 28548857 - 28548691
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||  | |||||||||||||||||||||||||||||    
T  28548857 tctctcatctatctgtcctttgtgtgtgacccaataggttcccgtagcgttgacaataatattaaatttcgtatttaatattataaacagtgagcggtat 28548758  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    ||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||| |||||    
T  28548757 ctagcaacacatcactgttacccaagtgacgagaatgtcatttgatctgacgaaacctttccgtgat 28548691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 81 - 247
Target Start/End: Complemental strand, 24643457 - 24643291
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| ||||||||||| ||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||| | ||||||    
T  24643457 tctctcatctatctgtcatttgtttgtgaccctataggctcccgtaacgttgacaataatattaaatcacatatttaatactataaacagtaaacggtat 24643358  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||| |||||    
T  24643357 ctagcaacacatcacttctacccaagtgacgagaatgtcatgtgatctgaggaaacctttccgtgat 24643291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 93 - 238
Target Start/End: Original strand, 8370838 - 8370983
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||| ||||||||||||||||||||||||  || ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  8370838 ctgttctttgtgtgtgaccctataggttctagtcacgttggcaataatattaaatctgatatttaatattataaacaatgagcggtatctagcaacacat 8370937  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctgacgaaacct 238  Q
    || ||||| ||||||||| ||||||||| |||||||||||||||||    
T  8370938 cattgctacccaagtgacaagaatgtcaagtgatctgacgaaacct 8370983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 93 - 241
Target Start/End: Complemental strand, 25611912 - 25611764
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||| ||||||||||||||||||||||||  || ||||||||||||||||||||||  | ||||||||||||||||| ||||||||||||||||||||||    
T  25611912 ctgttctttgtgtgtgaccctataggttctagtcacgttggcaataatattaaatcttacatttaatattataaacaatgagcggtatctagcaacacat 25611813  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    || ||||| ||||||||| ||||||||| ||||||||||||||||||||    
T  25611812 cattgctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 25611764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 93 - 241
Target Start/End: Complemental strand, 26241202 - 26241054
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||| ||||||||||||||||||||||||  || || |||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  26241202 ctgttctttgtgtgtgaccctataggttctagtcacattggcaataatattaaatctgatatttaatattataaacaatgagcggtatctagcaacacat 26241103  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    || ||||| ||||||||| ||||||||| ||||||||||||||||||||    
T  26241102 cattgctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 26241054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 93 - 240
Target Start/End: Original strand, 24796414 - 24796561
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    ||||||||||||||| || ||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||| |||||||| |||||||| ||||||    
T  24796414 ctgtcctttgtgtgtaactctataggttccggtaacgttgacaatattattaaatcacatatttaatattataaatagtgagcgatatctagccacacat 24796513  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctgacgaaaccttt 240  Q
    || || ||| |||||||||||||| |||||||||||||||||||||||    
T  24796514 cagtgatatgcaagtgacgagaatttcatgtgatctgacgaaaccttt 24796561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 93 - 241
Target Start/End: Complemental strand, 21970050 - 21969902
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||| |||||||||||||||| |||||||  || ||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||     
T  21970050 ctgttctttgtgtgtgaccctttaggttctagtcacgttggcaataatattaaatctgatatttaatattataaacattgagcggtatctagcaacacac 21969951  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    || ||||||||||||||| ||||| ||| ||||||||||||||||||||    
T  21969950 cattgctatccaagtgacaagaatatcaagtgatctgacgaaacctttc 21969902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 93 - 241
Target Start/End: Original strand, 22130195 - 22130343
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||| |||||||||||||||| |||||||  || ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  22130195 ctgttctttgtgtgtgaccctttaggttctagtcacgttggcaataatattaaatctaatatttaatattataaacaatgagcggtatctagcaacacat 22130294  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    ||  |||| ||||||||| ||| ||||| ||||||||||||||||||||    
T  22130295 catggctacccaagtgacaagagtgtcaagtgatctgacgaaacctttc 22130343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 93 - 240
Target Start/End: Complemental strand, 6431604 - 6431457
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||| ||||||||||| ||||||||||||  || ||||||||||||||||||||||  |||||||||| |||||||| ||||||||||||||||||||||    
T  6431604 ctgttctttgtgtgtggccctataggttctagtcacgttggcaataatattaaatctaatatttaatactataaacaatgagcggtatctagcaacacat 6431505  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctgacgaaaccttt 240  Q
    || ||||| | ||||||| ||||||||| |||||||||||||||||||    
T  6431504 cattgctacctaagtgacaagaatgtcaagtgatctgacgaaaccttt 6431457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 98 - 241
Target Start/End: Original strand, 27007108 - 27007251
Alignment:
Q  98 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactg 197  Q
    |||||||||||||||| |||||||  || ||||||||||| ||||||||||  ||||||||||| ||||||| |||||||||||||||||||||||| ||    
T  27007108 ctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatctaatatttaatatcataaacaatgagcggtatctagcaacacatcattg 27007207  T
Q  198 ctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    ||| ||||||||| ||||||||| ||||||||||||||||||||    
T  27007208 ctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 27007251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 98 - 241
Target Start/End: Original strand, 27014251 - 27014394
Alignment:
Q  98 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactg 197  Q
    |||||||||||||||| |||||||  || ||||||||||| ||||||||||  ||||||||||| ||||||| |||||||||||||||||||||||| ||    
T  27014251 ctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatctaatatttaatatcataaacaatgagcggtatctagcaacacatcattg 27014350  T
Q  198 ctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    ||| ||||||||| ||||||||| ||||||||||||||||||||    
T  27014351 ctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 27014394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 98 - 241
Target Start/End: Original strand, 22659084 - 22659227
Alignment:
Q  98 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactg 197  Q
    ||||||||||||||||||||||||   | ||||||||||||||||||||||  |||||||||| |||||||| |||||||||||||||||||||||| |     
T  22659084 ctttgtgtgtgaccctataggttctaatcacgttggcaataatattaaatctaatatttaatactataaacaatgagcggtatctagcaacacatcattt 22659183  T
Q  198 ctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    ||| ||||||||| ||||||||| ||||||||||||||| ||||    
T  22659184 ctacccaagtgacaagaatgtcaagtgatctgacgaaacttttc 22659227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 98 - 241
Target Start/End: Original strand, 27880078 - 27880221
Alignment:
Q  98 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacat-atttaatattataaacagtgagcggtatctagcaacacatcact 196  Q
    |||||||||||||||| |||||||  || ||||||||||| |||||||||| ||| ||||||||| ||||||| |||||||||||||||||||||||| |    
T  27880078 ctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatc-catcatttaatatcataaacaatgagcggtatctagcaacacatcatt 27880176  T
Q  197 gctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    |||| ||||||||| ||||||||| ||||||||||||||||||||    
T  27880177 gctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 27880221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 98 - 241
Target Start/End: Original strand, 28020259 - 28020402
Alignment:
Q  98 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacat-atttaatattataaacagtgagcggtatctagcaacacatcact 196  Q
    |||||||||||||||| |||||||  || ||||||||||| |||||||||| ||| ||||||||| ||||||| |||||||||||||||||||||||| |    
T  28020259 ctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatc-catcatttaatatcataaacaatgagcggtatctagcaacacatcatt 28020357  T
Q  197 gctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    |||| ||||||||| ||||||||| ||||||||||||||||||||    
T  28020358 gctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 28020402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 93 - 241
Target Start/End: Original strand, 45533859 - 45534007
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||| |||||||||||||||| |||||||  || ||||||||||| ||||||||||  |||| |||||  ||||||| ||||||||||||||||||||||    
T  45533859 ctgttctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatctaatatctaataccataaacaatgagcggtatctagcaacacat 45533958  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    || ||||| ||||||||| ||||||||| ||||||||||||||||||||    
T  45533959 cattgctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 45534007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 98 - 241
Target Start/End: Complemental strand, 21917387 - 21917244
Alignment:
Q  98 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactg 197  Q
    |||||||||||||||| |||||||  || ||||||||||| ||||||||||   |||||||||| ||||||| |||||||| ||||||||||||||| ||    
T  21917387 ctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatccattatttaatatcataaacaatgagcggtgtctagcaacacatcattg 21917288  T
Q  198 ctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    ||| ||||||||| ||||||||| ||||||||||||||||||||    
T  21917287 ctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 21917244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 99 - 240
Target Start/End: Complemental strand, 18836057 - 18835916
Alignment:
Q  99 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgc 198  Q
    ||||||||||||||||| |||||  |  |||||||||||||||||||||   ||||||||||||||||||| |||   |||||||||||||||||| |||    
T  18836057 tttgtgtgtgaccctattggttctagccacgttggcaataatattaaatttaatatttaatattataaacaatgactagtatctagcaacacatcattgc 18835958  T
Q  199 tatccaagtgacgagaatgtcatgtgatctgacgaaaccttt 240  Q
    || ||||||||| ||||||||| ||||| |||||||||||||    
T  18835957 tacccaagtgacaagaatgtcaagtgatttgacgaaaccttt 18835916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 92 - 240
Target Start/End: Original strand, 2962515 - 2962663
Alignment:
Q  92 tctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacaca 191  Q
    ||||| |||| |||||||||||||||||||  || ||||||| ||||||||||||||  ||||||| || |||||| | ||||| ||||||| |||||||    
T  2962515 tctgttctttttgtgtgaccctataggttctagtcacgttggtaataatattaaatctaatatttattactataaataatgagcagtatctaacaacaca 2962614  T
Q  192 tcactgctatccaagtgacgagaatgtcatgtgatctgacgaaaccttt 240  Q
    ||| ||||| ||||||||| ||||||||| ||||||| |||||||||||    
T  2962615 tcattgctacccaagtgacaagaatgtcaagtgatctaacgaaaccttt 2962663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 101 - 236
Target Start/End: Original strand, 8781467 - 8781602
Alignment:
Q  101 tgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgcta 200  Q
    |||||||||||||||| ||||| ||||| ||| ||||||||||||||    ||||||||||||||||||  |||||||||||||||||||||||||| |     
T  8781467 tgtgtgtgaccctataagttcctgtaacattgacaataatattaaattttttatttaatattataaacaacgagcggtatctagcaacacatcactgatt 8781566  T
Q  201 tccaagtgacgagaatgtcatgtgatctgacgaaac 236  Q
     ||||||||| ||||||||| ||||||| |||||||    
T  8781567 cccaagtgacaagaatgtcaagtgatctaacgaaac 8781602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 99 - 247
Target Start/End: Original strand, 14978900 - 14979045
Alignment:
Q  99 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgc 198  Q
    ||||||||||| | | |||||||  ||||| ||| ||||||||||||||| | |  ||||||||||||||||||||||||||||||  |||| |||||||    
T  14978900 tttgtgtgtgatcttgtaggttcttgtaacattgacaataatattaaatctcgt--ttaatattataaacagtgagcggtatctagatacacgtcactgc 14978997  T
Q  199 tatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    || | || |||||||||||||| ||||| |||| |||||||| ||||||    
T  14978998 tacctaaatgacgagaatgtcaagtgatatgac-aaacctttttgtgat 14979045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 81 - 138
Target Start/End: Complemental strand, 22172245 - 22172188
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaata 138  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  22172245 tctctcatctttctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaata 22172188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 22172193 - 22172130
Alignment:
Q  184 gcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||| |||||| ||||| |||||||||||||||||||| ||||||||| |||||||||||||||    
T  22172193 gcaatacatcaatgctacccaagtgacgagaatgtcatatgatctgacaaaacctttctgtgat 22172130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 134 - 240
Target Start/End: Original strand, 32872300 - 32872406
Alignment:
Q  134 caataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacga 233  Q
    |||||||||||||||   |||||||||||||||| ||  |  |||||||| ||||||||||||||||   ||||||  | |||||||  |||||||||||    
T  32872300 caataatattaaatcttgtatttaatattataaagagcaataggtatctaacaacacatcactgctactaaagtgataaaaatgtcacatgatctgacga 32872399  T
Q  234 aaccttt 240  Q
     ||||||    
T  32872400 caccttt 32872406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 20534880 - 20534937
Alignment:
Q  179 atctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaac 236  Q
    |||||||||||  ||||||||| ||||||||| |||||||||  ||||||||||||||    
T  20534880 atctagcaacatttcactgctacccaagtgacaagaatgtcaaatgatctgacgaaac 20534937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 192
Target Start/End: Original strand, 38231130 - 38231195
Alignment:
Q  125 taacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||||||| ||||||||||||| ||  |||||| ||||||||||| ||||| ||||||||| ||||||    
T  38231130 taacgttgacaataatattaaacca--tatttagtattataaacaatgagcagtatctagctacacat 38231195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 22646489 - 22646434
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatc 148  Q
    |||| |||||||||||||||| |||||||  || ||||||||||| ||||||||||    
T  22646489 ctgttctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatc 22646434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 247
Target Start/End: Original strand, 8967751 - 8967865
Alignment:
Q  123 cgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctatccaagtgacgagaatgtcatg 222  Q
    |||||| ||| ||||||||||||||   ||||||||||||||||| ||||| |  ||||||||          ||||| ||||||| |||||||||||||    
T  8967751 cgtaacattgacaataatattaaattttatatttaatattataaaaagtgaacaatatctagc----------tgctacccaagtggcgagaatgtcatg 8967840  T
Q  223 tgatctgacgaaacctttctgtgat 247  Q
    ||||||||  ||| |||| ||||||    
T  8967841 tgatctgattaaatctttttgtgat 8967865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 104 - 169
Target Start/End: Original strand, 27098592 - 27098656
Alignment:
Q  104 gtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaaca 169  Q
    ||||||| |||||||||  | | ||||||| ||||||||||||||| ||| |||||||||||||||    
T  27098592 gtgtgactctataggttttcttcacgttggtaataatattaaatcatata-ttaatattataaaca 27098656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 38231898 - 38231943
Alignment:
Q  202 ccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    ||||||||| ||||||||| ||||||| |||||| |||||||||||    
T  38231898 ccaagtgacaagaatgtcaagtgatctaacgaaatctttctgtgat 38231943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 247
Target Start/End: Complemental strand, 2375767 - 2375679
Alignment:
Q  159 tattataaacagtgagcggtatctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    ||||||||||| |||| ||||||||  ||||||||||||||| ||| | ||  ||||||||| ||||| | || |||| ||| ||||||    
T  2375767 tattataaacaatgagtggtatctaagaacacatcactgctacccacgcgagaagaatgtcacgtgatttcacaaaacttttttgtgat 2375679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 181
Target Start/End: Original strand, 37031890 - 37031958
Alignment:
Q  113 tataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatc 181  Q
    |||||||||  |||| ||||||||||| |||||||   |||||||||||||| || ||||| |||||||    
T  37031890 tataggttcttgtaatgttggcaataaaattaaattttatatttaatattatgaatagtgaacggtatc 37031958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 155; Significance: 2e-82; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 81 - 247
Target Start/End: Original strand, 11535459 - 11535625
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11535459 tctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 11535558  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  11535559 ctagcaacacatcactgctatccaagtgatgggaatgtcatgtgatctgacgaaacctttctgtgat 11535625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 81 - 247
Target Start/End: Original strand, 11542377 - 11542543
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11542377 tctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 11542476  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  11542477 ctagcaacacatcactgctacccaagtgacgggaatgtcatgtgatctgacgaaacctttctgtgat 11542543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 81 - 247
Target Start/End: Complemental strand, 18561808 - 18561642
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  18561808 tctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttgacaataatattaaatcacatatttaatattataaacagtgagcggtat 18561709  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  18561708 ctagcaacacatcactgctacccaagtgacgagaatgtcatgtgatctgacgaaacttttctgtgat 18561642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 88 - 247
Target Start/End: Complemental strand, 15153246 - 15153087
Alignment:
Q  88 tctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaa 187  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15153246 tctatctgtcctttgtgtgtgaccctataggttcacgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaa 15153147  T
Q  188 cacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  15153146 cacatcactgctacccaagtgacgagaaagtcatgtgatctgacgaaacctttctgtgat 15153087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 81 - 247
Target Start/End: Original strand, 24850956 - 24851122
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  24850956 tctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttgacaataatattaaatcacatatttaatattataaacagtgagcggtat 24851055  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  24851056 ctagcaacacatcattgctacccaagtgacgagaatgtcatatgatctgacgaaacctttctgtgat 24851122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 81 - 247
Target Start/End: Complemental strand, 29328594 - 29328428
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  29328594 tctctcatctatctgttctttgtgtgtgaccctataggttcccgtaacgttgacaataatattaaatcacatatttaatattataaacagtgagcggtat 29328495  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  29328494 ctagcaacacatcgctgctacccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 29328428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 81 - 247
Target Start/End: Complemental strand, 12751636 - 12751470
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| ||||||||||| |||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||    
T  12751636 tctctcatctatctgtcatttgtgggtgaccctataggttcccgtaacgttggtattaatattaaatcacatatttaatattataagcagtgagcggtat 12751537  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  12751536 ctagcaacacatcactgctacccaagtgacgagaatgtcatgtgatctgacgaaacctttctatgat 12751470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 81 - 247
Target Start/End: Complemental strand, 12739344 - 12739178
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| || |||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12739344 tctctcatatatccgtcctttgtgtgtgaccttatcggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 12739245  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||||||||||| ||||||||||| || || ||| ||||||||||||||||||||||||    
T  12739244 ctagcaacacatcactgctacccaagtgacgaaaaagtaatgagatctgacgaaacctttctgtgat 12739178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 81 - 240
Target Start/End: Complemental strand, 13392959 - 13392800
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| |||||| |||| ||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||    
T  13392959 tctctcatctatatgtcatttgtgtgtgaccatataggttcccgtaacgttgacaaaaatattaaatcacatatttaatattataaacagtgagtggtat 13392860  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaaccttt 240  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  13392859 ctagcaacacatcacttctacccaagtgacgagaatgtcatgtgatctgacgaaaccttt 13392800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 93 - 241
Target Start/End: Complemental strand, 8465716 - 8465568
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||| ||||||||||||||||||||||||  || ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  8465716 ctgttctttgtgtgtgaccctataggttctggtcacgttggcaataatattaaatctgatatttaatattataaacaatgagcggtatctagcaacacat 8465617  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    || ||||| ||||||||| ||||||||| ||||||||||||||||||||    
T  8465616 cattgctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 8465568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 93 - 241
Target Start/End: Complemental strand, 18400820 - 18400672
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||| |||||||||||||||| |||||||  || ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  18400820 ctgttctttgtgtgtgaccctttaggttctagtcacgttggcaataatattaaatctaatatttaatattataaacaatgagcggtatctagcaacacat 18400721  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    ||  |||| ||||||||| ||||||||| ||||||||||||||||||||    
T  18400720 catggctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 18400672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 93 - 241
Target Start/End: Complemental strand, 18407804 - 18407656
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||| |||||||||||||||| |||||||  || ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  18407804 ctgttctttgtgtgtgaccctttaggttctagtcacgttggcaataatattaaatctaatatttaatattataaacaatgagcggtatctagcaacacat 18407705  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    ||  |||| ||||||||| ||||||||| ||||||||||||||||||||    
T  18407704 catggctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 18407656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 24442968 - 24443105
Alignment:
Q  99 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgc 198  Q
    ||||| |||||||||||||||||  || ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  24442968 tttgtttgtgaccctataggttcttgtcacgttggcaataatattaaatcttatatttaatattataaacagtgagcggtatctaacaagacatcactgc 24443067  T
Q  199 tatccaagtgacgagaatgtcatgtgatctgacgaaac 236  Q
    || ||||||||||||||||| | |||||||||||||||    
T  24443068 tacccaagtgacgagaatgttaagtgatctgacgaaac 24443105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 100 - 236
Target Start/End: Original strand, 15168886 - 15169022
Alignment:
Q  100 ttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgct 199  Q
    ||||||||||||||||||| ||  |||||||||||||||||||||||||  ||||||||||||||||||||||| | ||||||||||| |||||||||||    
T  15168886 ttgtgtgtgaccctataggctcttgtaacgttggcaataatattaaatcttatatttaatattataaacagtgatcagtatctagcaatacatcactgct 15168985  T
Q  200 atccaagtgacgagaatgtcatgtgatctgacgaaac 236  Q
    | ||||||||| ||||||||| |||||||||||||||    
T  15168986 acccaagtgacaagaatgtcaagtgatctgacgaaac 15169022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 93 - 241
Target Start/End: Original strand, 48808082 - 48808230
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||| |||||||||||||||| |||||||  || ||||||||||| ||||||||||  ||||||||||| ||||||| ||||||||||||||||||||||    
T  48808082 ctgttctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatctaatatttaatatcataaacaatgagcggtatctagcaacacat 48808181  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    || ||||| ||||||||| ||||||||| ||||||||||||||||||||    
T  48808182 cattgctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 48808230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 98 - 240
Target Start/End: Original strand, 47166449 - 47166591
Alignment:
Q  98 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactg 197  Q
    ||||||||||||||||||||||||  || | ||||||||||||||||||||  ||||||||||||||||||| ||||| |||||||||||||||||| ||    
T  47166449 ctttgtgtgtgaccctataggttctagtcatgttggcaataatattaaatctaatatttaatattataaacaatgagcagtatctagcaacacatcattg 47166548  T
Q  198 ctatccaagtgacgagaatgtcatgtgatctgacgaaaccttt 240  Q
    ||| ||||||||| ||||||||| ||||||| |||||||||||    
T  47166549 ctacccaagtgacaagaatgtcaagtgatctaacgaaaccttt 47166591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 99 - 240
Target Start/End: Complemental strand, 34129285 - 34129144
Alignment:
Q  99 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgc 198  Q
    ||||||||||||||||||| |||  || ||||||||||||||||||||||  |||||||||| ||||| || |||||||||||||||||||||||| |||    
T  34129285 tttgtgtgtgaccctatagattctagtcacgttggcaataatattaaatctaatatttaataatataaccaatgagcggtatctagcaacacatcattgc 34129186  T
Q  199 tatccaagtgacgagaatgtcatgtgatctgacgaaaccttt 240  Q
    |||||||||||| ||||||||| ||||| |||||||||||||    
T  34129185 tatccaagtgacaagaatgtcaagtgatatgacgaaaccttt 34129144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 93 - 241
Target Start/End: Complemental strand, 19231605 - 19231457
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||| ||||||||||||||||||||||||  || ||||||||||||||||||||||  |||||||||| |||||||| |||| |||||||||||||||||    
T  19231605 ctgttctttgtgtgtgaccctataggttctagtcacgttggcaataatattaaatctaatatttaataatataaacaatgagtggtatctagcaacacat 19231506  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    |  ||||| ||||||||| ||||||||| |||||||||| |||||||||    
T  19231505 ctttgctacccaagtgacaagaatgtcaagtgatctgacaaaacctttc 19231457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 98 - 241
Target Start/End: Original strand, 18138929 - 18139072
Alignment:
Q  98 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactg 197  Q
    |||||||||||||||| |||||||  || ||||||||||| ||||||||||  ||||||||||  ||||||| |||||||||||||||||||||||| ||    
T  18138929 ctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatctaatatttaataccataaacaatgagcggtatctagcaacacatcattg 18139028  T
Q  198 ctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    ||| ||||||||| ||||||||| ||||||||||||||||||||    
T  18139029 ctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 18139072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 98 - 241
Target Start/End: Complemental strand, 30254849 - 30254706
Alignment:
Q  98 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactg 197  Q
    |||||||||||||||| |||||||  || ||||||||||| ||||||||||  |||||||||| |||||||| |||||||||||||||||||||||| ||    
T  30254849 ctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatctaatatttaatactataaacaatgagcggtatctagcaacacatcattg 30254750  T
Q  198 ctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    ||| ||| ||||| ||||||||| ||||||||||||||||||||    
T  30254749 ctacccacgtgacaagaatgtcaagtgatctgacgaaacctttc 30254706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 99 - 234
Target Start/End: Original strand, 41680559 - 41680694
Alignment:
Q  99 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgc 198  Q
    |||||||||||||||||||||||  || ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||| |||| |||    
T  41680559 tttgtgtgtgaccctataggttctagtcacgttggcaataatattaaatctaatatttaatattataaacaatgagcggtatctagcaacatatcattgc 41680658  T
Q  199 tatccaagtgacgagaatgtcatgtgatctgacgaa 234  Q
    || ||||||||| ||||||||| ||||| |||||||    
T  41680659 tacccaagtgacaagaatgtcaagtgatatgacgaa 41680694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 93 - 241
Target Start/End: Original strand, 18257150 - 18257299
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||| ||||||||||||||| ||||||||  || |||||| |||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  18257150 ctgttctttgtgtgtgaccccataggttcaagtcacgttgacaataatattaaatcctatatttaatattataaacaatgagcggtatctagcaacacat 18257249  T
Q  193 cactgctatcc-aagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    || ||||| || ||||||| ||||||||| |||||||||| |||||||||    
T  18257250 cattgctacccaaagtgacaagaatgtcaagtgatctgacaaaacctttc 18257299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 93 - 241
Target Start/End: Complemental strand, 15730467 - 15730319
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||| |||||||||||||||| |||||||  || ||||||||||| ||||||||||  |||| |||||  ||||||| ||||||||||||||||||||||    
T  15730467 ctgttctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatctaatatctaataccataaacaatgagcggtatctagcaacacat 15730368  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    || ||||| ||||||||| ||||||||| ||||||||||||||||||||    
T  15730367 cattgctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 15730319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 93 - 240
Target Start/End: Original strand, 18258708 - 18258855
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||| |||||||||||||||||||| ||   || |||||| |||||||||||||||  |||||||||| |||||||| ||||||||||||||||||||||    
T  18258708 ctgttctttgtgtgtgaccctatagattttagtcacgttgacaataatattaaatctaatatttaatactataaacaatgagcggtatctagcaacacat 18258807  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctgacgaaaccttt 240  Q
    || || || ||||||||| ||||||||| |||||||||||||||||||    
T  18258808 cattgttacccaagtgacaagaatgtcaagtgatctgacgaaaccttt 18258855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 98 - 241
Target Start/End: Complemental strand, 2205263 - 2205120
Alignment:
Q  98 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacat-atttaatattataaacagtgagcggtatctagcaacacatcact 196  Q
    |||||||||||||||| |||||||  || ||||||||||| |||||||||| ||| ||||||||| ||||||| |||||||||||||||| ||||||| |    
T  2205263 ctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatc-catcatttaatatcataaacaatgagcggtatctagcagcacatcatt 2205165  T
Q  197 gctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    |||| ||||||||| ||||||||| ||||||||||||||||||||    
T  2205164 gctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 2205120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 99 - 240
Target Start/End: Original strand, 19393018 - 19393158
Alignment:
Q  99 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgc 198  Q
    |||||||||||||||||||||||  || | ||||| ||||||||||||||  |||||||||| |||||| | |||| ||||||||||||||||||| |||    
T  19393018 tttgtgtgtgaccctataggttctagtcatgttggaaataatattaaatctaatatttaatactataaaaa-tgaggggtatctagcaacacatcattgc 19393116  T
Q  199 tatccaagtgacgagaatgtcatgtgatctgacgaaaccttt 240  Q
    |||||||||||  ||||||||| ||||||||| |||||||||    
T  19393117 tatccaagtgagaagaatgtcaagtgatctgatgaaaccttt 19393158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 100 - 236
Target Start/End: Original strand, 25845114 - 25845251
Alignment:
Q  100 ttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaac-agtgagcggtatctagcaacacatcactgc 198  Q
    ||||||||||| ||||||||||  ||||| |||||| ||||||||||||  ||||||||||||| |||| | ||||| | ||||||||||||||||||||    
T  25845114 ttgtgtgtgacactataggttcttgtaacattggcattaatattaaatcttatatttaatattagaaactaatgagcagcatctagcaacacatcactgc 25845213  T
Q  199 tatccaagtgacgagaatgtcatgtgatctgacgaaac 236  Q
    || ||||||||| |||| |||| ||||| |||||||||    
T  25845214 tacccaagtgacaagaaagtcaagtgatatgacgaaac 25845251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 98 - 240
Target Start/End: Complemental strand, 28131274 - 28131132
Alignment:
Q  98 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactg 197  Q
    ||||||||||||| |||||||||   || ||||||||||||||||||||||  ||||||||||  ||||||| ||||||||||||| | ||||||   ||    
T  28131274 ctttgtgtgtgactctataggttatagtcacgttggcaataatattaaatctaatatttaatagaataaacaatgagcggtatctaacgacacatagttg 28131175  T
Q  198 ctatccaagtgacgagaatgtcatgtgatctgacgaaaccttt 240  Q
     || ||||||||| ||||||||| ||||| |||||||||||||    
T  28131174 ttacccaagtgacaagaatgtcaagtgatatgacgaaaccttt 28131132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 11546418 - 11546496
Alignment:
Q  162 tataaacagtgagcggtatctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaaccttt 240  Q
    ||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||    
T  11546418 tataaacagtgagtggtatttagcaacacatcactgttatccaagtgacgagaatgtcatatgatctgacgaaaacttt 11546496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 100 - 194
Target Start/End: Complemental strand, 12410207 - 12410113
Alignment:
Q  100 ttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatca 194  Q
    ||||||||||||||||| ||||  ||||||| || ||||||||||||||  ||||||||||||| |||||||||||||||||||||||| |||||    
T  12410207 ttgtgtgtgaccctataagttcttgtaacgtgggaaataatattaaatcttatatttaatattacaaacagtgagcggtatctagcaactcatca 12410113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 100 - 236
Target Start/End: Complemental strand, 12393339 - 12393203
Alignment:
Q  100 ttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgct 199  Q
    |||||||||| |||||||||||  |||| || || ||||||||||||||  ||||||||||||| |||||||||| | ||||||||||||||||| || |    
T  12393339 ttgtgtgtgaacctataggttcttgtaatgtgggaaataatattaaatcttatatttaatattacaaacagtgagagatatctagcaacacatcattgtt 12393240  T
Q  200 atccaagtgacgagaatgtcatgtgatctgacgaaac 236  Q
    | | ||||||| ||||| | | ||||| |||||||||    
T  12393239 acctaagtgacaagaatcttaagtgatatgacgaaac 12393203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 86 - 152
Target Start/End: Original strand, 11557443 - 11557507
Alignment:
Q  86 aatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacat 152  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  11557443 aatctatctgtcctttgtg--tgaccctataggttcccgtaacgttggcaataatattaaatcacat 11557507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 100 - 240
Target Start/End: Complemental strand, 19389271 - 19389131
Alignment:
Q  100 ttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgct 199  Q
    ||||||| ||||||||| ||||   |||| || | ||||||||||||||  ||||||||||||||||||||| ||   ||| |||| ||||||||  |||    
T  19389271 ttgtgtgcgaccctataagttctattaacattagaaataatattaaatcttatatttaatattataaacagtaagttatatttagctacacatcaaggct 19389172  T
Q  200 atccaagtgacgagaatgtcatgtgatctgacgaaaccttt 240  Q
    | ||||||||| ||||||||| ||||| |||||||||||||    
T  19389171 acccaagtgacaagaatgtcaagtgatatgacgaaaccttt 19389131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 99 - 199
Target Start/End: Original strand, 31189962 - 31190062
Alignment:
Q  99 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgc 198  Q
    |||||||||||||| ||||||||  || |||||| |||||||||| |||   ||||||||||||||||||| ||||||||||| ||||||| |||| |||    
T  31189962 tttgtgtgtgaccccataggttctagtcacgttgacaataatatttaatataatatttaatattataaacaatgagcggtatccagcaacaaatcattgc 31190061  T
Q  199 t 199  Q
    |    
T  31190062 t 31190062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 101 - 231
Target Start/End: Original strand, 47833385 - 47833516
Alignment:
Q  101 tgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtg-agcggtatctagcaacacatcactgct 199  Q
    ||||||||| | | |||| || |||||||||   ||| ||||||||| ||| |||||||||||||||||||| || |||||  | ||| |||||||| ||    
T  47833385 tgtgtgtgatcatctaggctctcgtaacgttaataatcatattaaataacacatttaatattataaacagtgaaggggtattcaacaatacatcactact 47833484  T
Q  200 atccaagtgacgagaatgtcatgtgatctgac 231  Q
    ||| ||||||||||||||| ||||||| ||||    
T  47833485 atcaaagtgacgagaatgttatgtgatttgac 47833516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 101 - 238
Target Start/End: Complemental strand, 39112586 - 39112449
Alignment:
Q  101 tgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgcta 200  Q
    ||||||||||  |||||||||  |||| |||| |||| ||| || |||  ||||||||||||||||| | |  | ||||||||||||||||| | || ||    
T  39112586 tgtgtgtgactatataggttcttgtaatgttgacaatgatactacatcttatatttaatattataaagaataggtggtatctagcaacacataaatgata 39112487  T
Q  201 tccaagtgacgagaatgtcatgtgatctgacgaaacct 238  Q
    ||||||| || | |||||||| |||| |||||||||||    
T  39112486 tccaagtaacaataatgtcatttgatttgacgaaacct 39112449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 14592573 - 14592463
Alignment:
Q  130 ttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctg 229  Q
    |||||||||||||||||||  ||||||||||||||||||| ||||| |||| ||| |||| |||| |  || | ||||||| || ||| || ||||| ||    
T  14592573 ttggcaataatattaaatctaatatttaatattataaacaatgagcagtatttagtaacatatcatttttacctaagtgacaagtatgccaagtgatatg 14592474  T
Q  230 acgaaaccttt 240  Q
    | |||||||||    
T  14592473 aggaaaccttt 14592463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 240
Target Start/End: Complemental strand, 16012125 - 16012012
Alignment:
Q  127 acgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctatccaagtgacgagaatgtcatgtgat 226  Q
    ||||||||||||||||||||||   ||| |||||||||||||| |||||  ||||||  |||| |||| | ||||| ||||||| || |||||| |||||    
T  16012125 acgttggcaataatattaaatctagtatctaatattataaacaatgagcactatctaataacatatcatttctatctaagtgacaagtatgtcaagtgat 16012026  T
Q  227 ctgacgaaaccttt 240  Q
     ||  |||||||||    
T  16012025 atgtggaaaccttt 16012012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 160
Target Start/End: Original strand, 10666649 - 10666716
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaata 160  Q
    |||| ||||||||||||||||||||||||  || ||||||  ||||||||||||||  ||||||||||    
T  10666649 ctgttctttgtgtgtgaccctataggttctagtcacgttgaaaataatattaaatctaatatttaata 10666716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 241
Target Start/End: Complemental strand, 7396948 - 7396858
Alignment:
Q  151 atatttaatattataaacagtgagcggtatctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    ||||||| |||||||||| ||||||   || ||||||||||| ||||||| | || |||| ||||||||||||||| | |||||| |||||    
T  7396948 atatttattattataaactgtgagcccgatgtagcaacacattactgctacctaaatgacaagaatgtcatgtgatataacgaaatctttc 7396858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 137 - 230
Target Start/End: Original strand, 23387713 - 23387806
Alignment:
Q  137 taatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctga 230  Q
    ||||||||||| ||| |||||||||||| |||| ||||  |||| ||   | |||||| || |||||||||||| ||||||||||||| |||||    
T  23387713 taatattaaattacacatttaatattattaacaatgagaagtatataaagaaacatcattgttatccaagtgacaagaatgtcatgtggtctga 23387806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 155; Significance: 2e-82; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 81 - 247
Target Start/End: Original strand, 24694855 - 24695021
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  24694855 tctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttgggaataatattaaatcacatatttaatattataaacagtgagcggtat 24694954  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  24694955 ctagcaacacatcactgctacccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 24695021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 81 - 247
Target Start/End: Original strand, 24701619 - 24701785
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  24701619 tctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttgggaataatattaaatcacatatttaatattataaacagtgagcggtat 24701718  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  24701719 ctagcaacacatcactgctacccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 24701785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 81 - 247
Target Start/End: Original strand, 19713895 - 19714061
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| ||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19713895 tctctcatctatctgtcatttgcgtgtgactctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 19713994  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  19713995 ctagcaacacatcactgctacccaagtgacgagaatgtcatgtgatctgacgaaacctttatgtgat 19714061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 81 - 247
Target Start/End: Original strand, 19706616 - 19706782
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| ||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  19706616 tctctcatctatctgtcatttgtgtgtgaccctataggtttccgtaacgtttgcaataatattaaatcacatatttaatattataaacactgagcggtat 19706715  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  19706716 ctagcaacacatcactgctacccaagtgacgagaatgtcatgtgatctgatgaaacctttctgtgat 19706782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 93 - 241
Target Start/End: Original strand, 25804970 - 25805118
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||| ||||||||||||||||||||||||  || ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  25804970 ctgttctttgtgtgtgaccctataggttctggtcacgttggcaataatattaaatctgatatttaatattataaacaatgagcggtatctagcaacacat 25805069  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    || ||||| ||||||||| ||||||||| ||||||||||||||||||||    
T  25805070 cattgctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 25805118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 93 - 241
Target Start/End: Complemental strand, 22941968 - 22941820
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||| ||||||||||||||||||||||||  || ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  22941968 ctgttctttgtgtgtgaccctataggttctagtcacgttggcaataatattaaatctgatatttaatattataaacaatgagcggtatctagcaacacat 22941869  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    || ||||| ||||||||| ||||||| | ||||||||||||||||||||    
T  22941868 cattgctacccaagtgacaagaatgtaaagtgatctgacgaaacctttc 22941820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 127 - 240
Target Start/End: Original strand, 18567943 - 18568056
Alignment:
Q  127 acgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctatccaagtgacgagaatgtcatgtgat 226  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  18567943 acgttgacaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcacggctacccaagtgacgagaatgtcatgtgat 18568042  T
Q  227 ctgacgaaaccttt 240  Q
    ||||| ||||||||    
T  18568043 ctgaccaaaccttt 18568056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 93 - 241
Target Start/End: Complemental strand, 20941744 - 20941596
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||| ||||||||||||||||||||||||  || ||||||| |||||||||||||   ||||||||||||||||||| ||||||||||||||||||||||    
T  20941744 ctgttctttgtgtgtgaccctataggttctagtcacgttggaaataatattaaatttgatatttaatattataaacaatgagcggtatctagcaacacat 20941645  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    || ||||| ||||||||| ||||||||| ||||||||||||||||||||    
T  20941644 cattgctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 20941596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 98 - 241
Target Start/End: Complemental strand, 23546633 - 23546490
Alignment:
Q  98 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactg 197  Q
    |||||||||||||||| |||||||  || ||||||||||| ||||||||||  ||||||||||| ||||||| |||||||||||||||||||||||| ||    
T  23546633 ctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatctaatatttaatatcataaacaatgagcggtatctagcaacacatcattg 23546534  T
Q  198 ctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    ||| ||||||||| ||||||||| ||||||||||||||||||||    
T  23546533 ctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 23546490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 94 - 246
Target Start/End: Complemental strand, 39539346 - 39539193
Alignment:
Q  94 tgtcctttgtgtgtgaccc-tataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    ||||||||||||||||||| | |||  |||  |||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||     
T  39539346 tgtcctttgtgtgtgacccctgtagaatccaataacattggcaataatattaaatcacatatttaatattataaatagttagcggtatctagcaacacaa 39539247  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtga 246  Q
    ||| |||| ||||||||||||||| ||||||||||||||||||| ||| |||||    
T  39539246 caccgctacccaagtgacgagaatatcatgtgatctgacgaaacatttatgtga 39539193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 93 - 241
Target Start/End: Complemental strand, 31097533 - 31097385
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||| ||||||||||||||||||||||||  || ||||||||||||||||||||||  ||||||||||||||||||| ||| ||||||||||||||||||    
T  31097533 ctgttctttgtgtgtgaccctataggttctagtcacgttggcaataatattaaatccgatatttaatattataaacaatgaacggtatctagcaacacat 31097434  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    || ||||| ||||||||| ||||||||| ||||| ||| ||||| ||||    
T  31097433 cattgctacccaagtgacaagaatgtcaagtgatatgatgaaacttttc 31097385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 98 - 241
Target Start/End: Complemental strand, 32610 - 32467
Alignment:
Q  98 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactg 197  Q
    |||||||||||||||| |||||||  || ||||||||||| ||||||||||   |||||||||| ||||||| |||||||||||||||||||||||| ||    
T  32610 ctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatccattatttaatatcataaacaatgagcggtatctagcaacacatcattg 32511  T
Q  198 ctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    ||| ||||||||| ||||||||| ||||||||||||||||||||    
T  32510 ctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 32467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 93 - 240
Target Start/End: Original strand, 12764574 - 12764721
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||| ||||||||||||||||||||||||  || ||||||| ||||||||||||||  ||||||| || |||||| | ||||||||||||||||||||||    
T  12764574 ctgttctttgtgtgtgaccctataggttctagtcacgttggtaataatattaaatctaatatttattactataaataatgagcggtatctagcaacacat 12764673  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctgacgaaaccttt 240  Q
    || ||||| ||||||||| ||||||||| |||||||||||||||||||    
T  12764674 cattgctacccaagtgacaagaatgtcaagtgatctgacgaaaccttt 12764721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 99 - 240
Target Start/End: Original strand, 9811323 - 9811464
Alignment:
Q  99 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgc 198  Q
    |||||||||||||||||||||||  || ||||||| ||||||||||||||  ||||||| || |||||| | |||||||||||||||||||||||| |||    
T  9811323 tttgtgtgtgaccctataggttctagtcacgttggtaataatattaaatctaatatttattactataaataatgagcggtatctagcaacacatcattgc 9811422  T
Q  199 tatccaagtgacgagaatgtcatgtgatctgacgaaaccttt 240  Q
    || ||||||||| ||||||||| |||||||||||||||||||    
T  9811423 tacccaagtgacaagaatgtcaagtgatctgacgaaaccttt 9811464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 93 - 241
Target Start/End: Original strand, 12789249 - 12789397
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||| |||||||||||||||| |||||||  || ||||||||||| ||||||||||  |||| |||||  ||||||| ||||||||||||||||||||||    
T  12789249 ctgttctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatctaatatctaataccataaacaatgagcggtatctagcaacacat 12789348  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    || ||||| ||||||||| ||||||||| ||||||||||||||||||||    
T  12789349 cattgctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 12789397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 99 - 247
Target Start/End: Original strand, 17282873 - 17283021
Alignment:
Q  99 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgc 198  Q
    |||||||||||||||  ||||||  ||| ||||| |||||||||||||||  ||||||||||||||||||||||||| || ||||||| |||||||||||    
T  17282873 tttgtgtgtgaccctgcaggttcttgtagcgttgacaataatattaaatccaatatttaatattataaacagtgagcagtgtctagcagcacatcactgc 17282972  T
Q  199 tatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    || ||||||||| ||||||||| ||||||||||||||| ||| ||||||    
T  17282973 tacccaagtgacaagaatgtcaagtgatctgacgaaacttttatgtgat 17283021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 93 - 241
Target Start/End: Original strand, 24932892 - 24933040
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||| |||||||||||||||| |||||||  || ||||||||||| ||||||||||  |||| |||||  ||||||| ||||||||||||||||||||||    
T  24932892 ctgttctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatctaatatctaataccataaacaatgagcggtatctagcaacacat 24932991  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    || ||||| ||||||||| ||||||||| ||||||||||||||||||||    
T  24932992 cattgctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 24933040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 99 - 240
Target Start/End: Original strand, 31651370 - 31651511
Alignment:
Q  99 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgc 198  Q
    ||||||||| |||| ||||||||  |||||||||| |||||||| |||||  || |||||||||||||| ||||||||||||||| |||||||||| |||    
T  31651370 tttgtgtgtcaccccataggttcttgtaacgttggtaataatatgaaatcctatgtttaatattataaagagtgagcggtatctaacaacacatcattgc 31651469  T
Q  199 tatccaagtgacgagaatgtcatgtgatctgacgaaaccttt 240  Q
    || ||||||||| ||||||||| |||||| ||||||||||||    
T  31651470 tacccaagtgacaagaatgtcaagtgatccgacgaaaccttt 31651511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 99 - 247
Target Start/End: Original strand, 17298320 - 17298466
Alignment:
Q  99 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgc 198  Q
    ||||||||| ||||| |||||||   || ||||| |||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||    
T  17298320 tttgtgtgt-accctgtaggttcttatagcgttgacaataatattaaatcttatatttaatattataaacagtgagcggtgtctagcaacacatcactgc 17298418  T
Q  199 tatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||  ||||||||| ||||| ||||||||| ||| ||||||    
T  17298419 tatccaagtga-aagaatgtcaagtgatttgacgaaacttttatgtgat 17298466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 98 - 240
Target Start/End: Complemental strand, 5098361 - 5098219
Alignment:
Q  98 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactg 197  Q
    ||||||||||||| || ||  |||  || |||||| |||||||||||||||  |||||||||| |||||||| |||||||||||||||||||||||| ||    
T  5098361 ctttgtgtgtgactctttatattctagtcacgttgacaataatattaaatctaatatttaatactataaacaatgagcggtatctagcaacacatcattg 5098262  T
Q  198 ctatccaagtgacgagaatgtcatgtgatctgacgaaaccttt 240  Q
    ||| ||||||||| ||||||||| ||||||||||| |||||||    
T  5098261 ctacccaagtgacaagaatgtcaagtgatctgacggaaccttt 5098219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 98 - 236
Target Start/End: Original strand, 7865019 - 7865157
Alignment:
Q  98 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactg 197  Q
    ||||||||||||||||||||||||  || ||||||| ||||||||||||||  ||||||| || |||||| | |||||| |||||| |||||||||| ||    
T  7865019 ctttgtgtgtgaccctataggttctagtcacgttggtaataatattaaatctaatatttattactataaataatgagcgttatctaacaacacatcattg 7865118  T
Q  198 ctatccaagtgacgagaatgtcatgtgatctgacgaaac 236  Q
    ||| ||||||||| ||||||||| |||||||||||||||    
T  7865119 ctacccaagtgacaagaatgtcaagtgatctgacgaaac 7865157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 17314396 - 17314533
Alignment:
Q  99 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgc 198  Q
    ||||||||| ||||| |||||||  ||| | ||| |||||||||||||||  ||||||||||||||||||| | |||||| |||||||||||||||||||    
T  17314396 tttgtgtgtaaccctgtaggttcttgtagcattgacaataatattaaatcttatatttaatattataaacaataagcggtgtctagcaacacatcactgc 17314495  T
Q  199 tatccaagtgacgagaatgtcatgtgatctgacgaaac 236  Q
    || ||||||||  ||||||||| |||||||||||||||    
T  17314496 tacccaagtgaaaagaatgtcaagtgatctgacgaaac 17314533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 98 - 236
Target Start/End: Complemental strand, 26245815 - 26245676
Alignment:
Q  98 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaat-cacatatttaatattataaacagtgagcggtatctagcaacacatcact 196  Q
    |||||||| ||| |||||||||||  || ||||||||||||||||||||| |  || || ||||  ||||||| |||||||||||||||||||||||| |    
T  26245815 ctttgtgtctgatcctataggttctagtcacgttggcaataatattaaattctaatgttcaataccataaacaatgagcggtatctagcaacacatcatt 26245716  T
Q  197 gctatccaagtgacgagaatgtcatgtgatctgacgaaac 236  Q
    |||| ||||||||| ||||||||| |||||||||||||||    
T  26245715 gctacccaagtgacaagaatgtcaagtgatctgacgaaac 26245676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 100 - 240
Target Start/End: Complemental strand, 39535895 - 39535762
Alignment:
Q  100 ttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgct 199  Q
    ||||||||||||| ||||||||  || ||||||||||||||||||       |||||||||||||||||| |||||||||||||||||||||||| ||||    
T  39535895 ttgtgtgtgaccccataggttctagtcacgttggcaataatatta-------tatttaatattataaacaatgagcggtatctagcaacacatcattgct 39535803  T
Q  200 atccaagtgacgagaatgtcatgtgatctgacgaaaccttt 240  Q
    | |   ||||| ||||||||| |||||||||||||||||||    
T  39535802 accagtgtgacaagaatgtcaagtgatctgacgaaaccttt 39535762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 151 - 240
Target Start/End: Original strand, 22546763 - 22546852
Alignment:
Q  151 atatttaatattataaacagtgagcggtatctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaaccttt 240  Q
    ||||||||||||||||| | |||| ||||| || |||||||||||   |||||||||||| |||||||||||| || |||||||||||||    
T  22546763 atatttaatattataaataatgagtggtatgtaacaacacatcacgcatatccaagtgacaagaatgtcatgtaatatgacgaaaccttt 22546852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 145 - 236
Target Start/End: Original strand, 33476767 - 33476858
Alignment:
Q  145 aatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaac 236  Q
    ||||||| ||||| |||||||||||||||| | |||||| ||| ||||||||| ||| |||||||||||||| |||| |||| ||| |||||    
T  33476767 aatcacacatttagtattataaacagtgagtgatatctaacaatacatcactgttattcaagtgacgagaatatcatttgatttgatgaaac 33476858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 247
Target Start/End: Original strand, 28719234 - 28719320
Alignment:
Q  161 ttataaacagtgagcggtatctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    ||||||||| ||||  |||||||||||||||||| ||||| ||||||||| ||||| |||  | |||||||||||||||| ||||||    
T  28719234 ttataaacaatgagatgtatctagcaacacatcattgctacccaagtgacaagaatatcaaataatctgacgaaacctttatgtgat 28719320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 241
Target Start/End: Original strand, 20099922 - 20099977
Alignment:
Q  186 aacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    ||||||||| ||||| ||||||||| |||||||||| ||||||||||||| |||||    
T  20099922 aacacatcattgctacccaagtgacaagaatgtcatatgatctgacgaaatctttc 20099977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 150; Significance: 2e-79; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 81 - 246
Target Start/End: Original strand, 107 - 272
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  107 tctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 206  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtga 246  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||    
T  207 ctagcaacacatcactgctaaccaagtgacgagaatgtcatgtgatatgacgaaacctttatgtga 272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 81 - 246
Target Start/End: Original strand, 5618 - 5783
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5618 tctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 5717  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtga 246  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||    
T  5718 ctagcaacacatcactgctacccaagtgacgagaatgtcatgtgatatgacgaaacctttatgtga 5783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 81 - 247
Target Start/End: Complemental strand, 19097 - 18931
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19097 tctctcatctatctgtcctttctgtgtgaccctataggttcctgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 18998  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||    
T  18997 ctagcaacacatcactgctacccaagtgacgagaatgtcatgtgatttgacgagacctttctgtgat 18931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 81 - 240
Target Start/End: Complemental strand, 6332 - 6173
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  6332 tctctcatctatctgtcttttgtgtgtgaccctataggttcccgtaacgttgacaataatattaaatcacatatttaatattataaatagtgagcggtat 6233  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaaccttt 240  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||    
T  6232 ctagcaacacatcactgctacccaagtgacgagaatgtcatgtgatctggcaaaaccttt 6173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 81 - 247
Target Start/End: Original strand, 229788 - 229954
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtat 180  Q
    ||||| || ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||    
T  229788 tctctcatgtatctgtcctttgtgtgtgaccctataggttgccgtaacgttgacaataatattaaatcacatatttcaaattataaacagtgagcggtat 229887  T
Q  181 ctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    | |||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||| ||||||    
T  229888 ccagcaacacatcattgctacccaagtgacgagaatgtcatgtgatctgacgaaacatttatgtgat 229954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 93 - 241
Target Start/End: Complemental strand, 900 - 752
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||| ||||||||||||||||||||||||  || ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  900 ctgttctttgtgtgtgaccctataggttctagtcacgttggcaataatattaaatctgatatttaatattataaacaatgagcggtatctagcaacacat 801  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    || ||||| ||||||||| ||||||||| ||||||| ||||||||||||    
T  800 cattgctacccaagtgacaagaatgtcaagtgatcttacgaaacctttc 752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 97; Significance: 9e-48; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 93 - 241
Target Start/End: Complemental strand, 879 - 731
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||| |||||||||||||||| |||||||  || ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  879 ctgttctttgtgtgtgaccctttaggttctagtcacgttggcaataatattaaatctgatatttaatattataaacaatgagcggtatctagcaacacat 780  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    || ||||| ||||||||| ||||||||| ||||||||||||| ||||||    
T  779 cattgctacccaagtgacaagaatgtcaagtgatctgacgaatcctttc 731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 97; Significance: 9e-48; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 93 - 241
Target Start/End: Complemental strand, 120446 - 120298
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||| |||||||||||||||| |||||||  || ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  120446 ctgttctttgtgtgtgaccctttaggttctagtcacgttggcaataatattaaatctaatatttaatattataaacaatgagcggtatctagcaacacat 120347  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    ||  |||| ||||||||| ||||||||| ||||||||||||||||||||    
T  120346 catggctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 120298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 98 - 241
Target Start/End: Original strand, 3266 - 3409
Alignment:
Q  98 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactg 197  Q
    |||||||||||||||| |||||||  || ||||||||||| ||||||||||  ||||||||||  ||||||| |||||||||||||||||||||||| ||    
T  3266 ctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatctaatatttaataccataaacaatgagcggtatctagcaacacatcattg 3365  T
Q  198 ctatccaagtgacgagaatgtcatgtgatctgacgaaacctttc 241  Q
    ||| ||||||||| ||||||||| ||||||||||||||||||||    
T  3366 ctacccaagtgacaagaatgtcaagtgatctgacgaaacctttc 3409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 126 - 240
Target Start/End: Original strand, 12567 - 12681
Alignment:
Q  126 aacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctatccaagtgacgagaatgtcatgtga 225  Q
    |||||||||||||||||||||||  |||||||||| |||||||| |||||||||||||||||||||||| ||||| ||||||||| ||||||||| ||||    
T  12567 aacgttggcaataatattaaatctaatatttaatactataaacaatgagcggtatctagcaacacatcattgctaaccaagtgacaagaatgtcaagtga 12666  T
Q  226 tctgacgaaaccttt 240  Q
    |||||||||||||||    
T  12667 tctgacgaaaccttt 12681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 93 - 240
Target Start/End: Original strand, 66993 - 67140
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 192  Q
    |||| |||||||||||| |||||||||||  || |||||| |||||||||||||||  |||||||||| |||||||| ||||||||||||||||||||||    
T  66993 ctgttctttgtgtgtgatcctataggttctagtcacgttgacaataatattaaatctaatatttaatactataaacaatgagcggtatctagcaacacat 67092  T
Q  193 cactgctatccaagtgacgagaatgtcatgtgatctgacgaaaccttt 240  Q
    || ||||| ||||||||  ||||||||| |||||||||  ||||||||    
T  67093 cattgctacccaagtgaaaagaatgtcaagtgatctgaaaaaaccttt 67140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 98 - 240
Target Start/End: Complemental strand, 54475 - 54333
Alignment:
Q  98 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactg 197  Q
    ||||||||||||||||||| ||||  || ||||||||||||||| ||||||  ||||| |||| |||||||| |||||||||||||||||||||||| ||    
T  54475 ctttgtgtgtgaccctataagttctagtcacgttggcaataatactaaatctaatattcaatactataaacaatgagcggtatctagcaacacatcattg 54376  T
Q  198 ctatccaagtgacgagaatgtcatgtgatctgacgaaaccttt 240  Q
    ||| | || |||| ||||||||| |||| ||||||||||||||    
T  54375 ctacctaaatgacaagaatgtcaagtgaactgacgaaaccttt 54333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 39578 - 39715
Alignment:
Q  99 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgc 198  Q
    |||||||||||||||||||||||  || |||||||||||||||||||||   |||||||||||||||||||  |||| ||||||| ||||||| || |||    
T  39578 tttgtgtgtgaccctataggttctagtcacgttggcaataatattaaatgtaatatttaatattataaacaacgagcagtatctaacaacacaacattgc 39677  T
Q  199 tatccaagtgacgagaatgtcatgtgatctgacgaaac 236  Q
    || ||||||||| ||||||||| ||||||||| |||||    
T  39678 tacccaagtgacaagaatgtcaagtgatctgatgaaac 39715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 99 - 220
Target Start/End: Complemental strand, 27253 - 27132
Alignment:
Q  99 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgc 198  Q
    |||||||||||||| |||||||   || |||||||||||||||||||||   ||||||||||||||||||| |||| ||||||||||||||||||| |||    
T  27253 tttgtgtgtgaccccataggttttagtcacgttggcaataatattaaatataatatttaatattataaacaatgagaggtatctagcaacacatcattgc 27154  T
Q  199 tatccaagtgacgagaatgtca 220  Q
    || ||||||||| ||| |||||    
T  27153 taaccaagtgacaagagtgtca 27132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1303 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold1303
Description:

Target: scaffold1303; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 81 - 160
Target Start/End: Original strand, 1359 - 1438
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaata 160  Q
    ||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  1359 tctctcatctatctgtcatttgtgtgtgaccctataggttctcgtaacgttggcaataatattaaatcacgtatttaata 1438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 93 - 182
Target Start/End: Original strand, 8099 - 8188
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatct 182  Q
    |||| ||||||||||||||||||||||||  || ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||    
T  8099 ctgttctttgtgtgtgaccctataggttctagtcacgttggcaataatattaaatctgatatttaatattataaacaatgagcggtatct 8188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 175 - 247
Target Start/End: Original strand, 25481 - 25553
Alignment:
Q  175 cggtatctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  25481 cggtatctagcaagacatcactgctacccaagtgacgagaatgtcatgtgatctgacgaaacctttatgtgat 25553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 103 - 240
Target Start/End: Original strand, 108718 - 108855
Alignment:
Q  103 tgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctatc 202  Q
    ||||| |||||||||||||   | |||||| |||||||||||||||   | |||||||||||||  | ||||| |||||||| ||||||||||||||| |    
T  108718 tgtgtaaccctataggttcttttcacgttgacaataatattaaatctattctttaatattataatgaatgagcagtatctagaaacacatcactgctacc 108817  T
Q  203 caagtgacgagaatgtcatgtgatctgacgaaaccttt 240  Q
    ||||| || ||||||||| |||||| || |||||||||    
T  108818 caagtaacaagaatgtcaagtgatccgaggaaaccttt 108855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 93 - 178
Target Start/End: Complemental strand, 128213 - 128128
Alignment:
Q  93 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggt 178  Q
    |||| ||||||||||||||||||||||||  || |||||| |||||||||||||||  |||||||||| |||||||| ||||||||    
T  128213 ctgttctttgtgtgtgaccctataggttctagtcacgttgacaataatattaaatctaatatttaatactataaacaatgagcggt 128128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 152 - 239
Target Start/End: Complemental strand, 24511 - 24424
Alignment:
Q  152 tatttaatattataaacagtgagcggtatctagcaacacatcactgctatccaagtgacgagaatgtcatgtgatctgacgaaacctt 239  Q
    |||| ||||||||||||| |||| ||||||||||||||| |||||| || ||||||||| || ||  || ||||| ||||||||||||    
T  24511 tattcaatattataaacactgaggggtatctagcaacacgtcactgttacccaagtgacaaggatagcaagtgatttgacgaaacctt 24424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 81500 - 81545
Alignment:
Q  202 ccaagtgacgagaatgtcatgtgatctgacgaaacctttctgtgat 247  Q
    ||||||||||||||||||||||||||| ||||||| |||| |||||    
T  81500 ccaagtgacgagaatgtcatgtgatctaacgaaacttttccgtgat 81545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 247
Target Start/End: Complemental strand, 9830 - 9703
Alignment:
Q  126 aacgttggcaataatattaaatcacatatttaatattataaac-agtgagcggtatct-agc-aacacatcactgctatcc-aagtgacgagaatgtcat 221  Q
    |||||||||||| ||||||||||  |||| |||||  |||||| | |||||||||||| ||| ||||||||| ||||| || ||||||| |||||||||     
T  9830 aacgttggcaatgatattaaatctaatatctaataccataaacaaatgagcggtatctaagcaaacacatcattgctacccaaagtgacaagaatgtcaa 9731  T
Q  222 g-tgatctgacg-aaacctttctgtgat 247  Q
    | |||||||||| |||||||||| ||||    
T  9730 gttgatctgacgaaaacctttctatgat 9703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 199 - 240
Target Start/End: Complemental strand, 15802 - 15761
Alignment:
Q  199 tatccaagtgacgagaatgtcatgtgatctgacgaaaccttt 240  Q
    |||||||||||| ||||||| ||||||||| |||||||||||    
T  15802 tatccaagtgacaagaatgtgatgtgatctaacgaaaccttt 15761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 149
Target Start/End: Complemental strand, 15910 - 15842
Alignment:
Q  81 tctctaatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatca 149  Q
    ||||| || ||| |||||| ||||||||||| |||||||| |||| || |||  |||||||||||||||    
T  15910 tctctcatttatttgtcctatgtgtgtgaccatataggtttccgtcacattgttaataatattaaatca 15842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University