View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2098_low_26 (Length: 244)
Name: NF2098_low_26
Description: NF2098
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2098_low_26 |
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Alignment Details
Target: chr7 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 21881033 - 21880792
Alignment:
| Q |
1 |
agacacctgtaataatttgagaagaataatgttatttaatgtaaccacatatgttagtatcgtgccgccatacaggccttcaatctaaagtgttggtcaa |
100 |
Q |
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| T |
21881033 |
agacacctataataatttgagaagaataatgttatttaatgtaaccacatatgttagtatcgtgccgccatacaggccttcaatctaaagtgttggtcaa |
21880934 |
T |
|
| Q |
101 |
atcggctcgttgtgacttacgtgttgaggacttgccatcttcatttggttcaagatatctttcaaaatacttatcattggtgtagccccaattcctagac |
200 |
Q |
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|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
21880933 |
atcggctcgttgtgacttacttgttgaggacttgccatcttcatttggttcaagatatctttcaaaatacttatcattggtgtggccccaattcctagac |
21880834 |
T |
|
| Q |
201 |
caatgagcaagagtacatcataatgcttatagctctgtgctg |
242 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||| |
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| T |
21880833 |
caatgagcaagagtacatcataatgcttatagctttgtgctg |
21880792 |
T |
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