View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2098_low_27 (Length: 241)

Name: NF2098_low_27
Description: NF2098
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2098_low_27
NF2098_low_27
[»] chr6 (68 HSPs)
chr6 (16-229)||(26802400-26802613)
chr6 (16-229)||(28781097-28781310)
chr6 (16-229)||(28786236-28786449)
chr6 (16-229)||(28792357-28792570)
chr6 (16-229)||(27718395-27718608)
chr6 (16-229)||(27611018-27611231)
chr6 (16-229)||(27724861-27725074)
chr6 (16-229)||(27698510-27698723)
chr6 (16-229)||(26646437-26646650)
chr6 (16-229)||(26752405-26752618)
chr6 (16-229)||(27678904-27679117)
chr6 (16-229)||(27593036-27593249)
chr6 (16-229)||(27604721-27604934)
chr6 (21-234)||(27677625-27677838)
chr6 (21-227)||(27706420-27706626)
chr6 (16-207)||(26655947-26656138)
chr6 (16-207)||(26761918-26762109)
chr6 (23-227)||(26884128-26884334)
chr6 (16-227)||(27531215-27531426)
chr6 (20-229)||(25579681-25579890)
chr6 (20-204)||(25481704-25481888)
chr6 (20-204)||(26142827-26143011)
chr6 (16-229)||(31284246-31284459)
chr6 (16-207)||(27338103-27338294)
chr6 (16-207)||(27398843-27399034)
chr6 (16-173)||(27229190-27229347)
chr6 (20-229)||(25538502-25538711)
chr6 (20-229)||(26055888-26056097)
chr6 (20-229)||(26075858-26076067)
chr6 (23-182)||(28234529-28234688)
chr6 (62-179)||(25506975-25507092)
chr6 (19-204)||(26048806-26048991)
chr6 (19-204)||(26069975-26070160)
chr6 (16-221)||(26622934-26623139)
chr6 (16-221)||(26728912-26729117)
chr6 (22-229)||(26823804-26824011)
chr6 (16-229)||(26861574-26861784)
chr6 (21-193)||(28181077-28181249)
chr6 (25-193)||(28226917-28227085)
chr6 (21-182)||(28185329-28185490)
chr6 (36-193)||(28325459-28325616)
chr6 (37-193)||(28242783-28242939)
chr6 (32-207)||(28149912-28150086)
chr6 (28-182)||(28139511-28139665)
chr6 (37-193)||(28297765-28297921)
chr6 (37-193)||(28514152-28514308)
chr6 (37-182)||(26937073-26937218)
chr6 (21-193)||(26848623-26848795)
chr6 (28-173)||(26893543-26893688)
chr6 (37-193)||(26341986-26342142)
chr6 (21-117)||(26949624-26949720)
chr6 (37-113)||(29826006-29826082)
chr6 (58-212)||(2184288-2184442)
chr6 (21-107)||(26635653-26635739)
chr6 (21-107)||(26741619-26741705)
chr6 (100-229)||(27427622-27427751)
chr6 (21-105)||(26811472-26811556)
chr6 (21-105)||(28491660-28491744)
chr6 (21-105)||(29804070-29804154)
chr6 (40-211)||(2184880-2185051)
chr6 (28-107)||(29467797-29467876)
chr6 (37-83)||(26617305-26617351)
chr6 (37-83)||(26723233-26723279)
chr6 (21-83)||(26959128-26959190)
chr6 (21-90)||(27665272-27665341)
chr6 (21-117)||(25071622-25071718)
chr6 (21-81)||(27214380-27214440)
chr6 (21-81)||(27234788-27234848)
[»] scaffold0277 (2 HSPs)
scaffold0277 (16-229)||(13648-13861)
scaffold0277 (16-229)||(4687-4900)
[»] scaffold0419 (1 HSPs)
scaffold0419 (16-229)||(7483-7696)
[»] scaffold0349 (2 HSPs)
scaffold0349 (16-229)||(14372-14584)
scaffold0349 (16-227)||(3439-3651)
[»] scaffold1254 (1 HSPs)
scaffold1254 (16-161)||(1-146)
[»] chr1 (3 HSPs)
chr1 (22-229)||(28164365-28164572)
chr1 (16-209)||(268380-268573)
chr1 (21-229)||(28127682-28127891)
[»] chr8 (2 HSPs)
chr8 (16-229)||(29273786-29273999)
chr8 (25-89)||(31903818-31903882)
[»] chr4 (7 HSPs)
chr4 (16-229)||(18699403-18699616)
chr4 (16-229)||(18679570-18679783)
chr4 (16-229)||(18731507-18731720)
chr4 (16-229)||(18655480-18655693)
chr4 (16-229)||(18724088-18724301)
chr4 (100-229)||(18073804-18073933)
chr4 (24-112)||(5091087-5091175)
[»] scaffold0038 (4 HSPs)
scaffold0038 (23-193)||(34690-34860)
scaffold0038 (25-193)||(27415-27583)
scaffold0038 (36-193)||(116774-116931)
scaffold0038 (37-193)||(42945-43101)
[»] scaffold0019 (1 HSPs)
scaffold0019 (21-193)||(58334-58506)
[»] chr2 (2 HSPs)
chr2 (37-193)||(3279667-3279823)
chr2 (21-117)||(17993812-17993908)
[»] chr5 (1 HSPs)
chr5 (21-107)||(16688974-16689060)
[»] scaffold0003 (1 HSPs)
scaffold0003 (100-229)||(59612-59741)


Alignment Details
Target: chr6 (Bit Score: 210; Significance: 1e-115; HSPs: 68)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 16 - 229
Target Start/End: Original strand, 26802400 - 26802613
Alignment:
Q  16 cttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaa 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26802400 cttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaa 26802499  T
Q  116 tttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26802500 tttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 26802599  T
Q  216 cttgcctgttttct 229  Q
    ||||||| ||||||    
T  26802600 cttgcctattttct 26802613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 16 - 229
Target Start/End: Original strand, 28781097 - 28781310
Alignment:
Q  16 cttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaa 115  Q
    |||| ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |    
T  28781097 cttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctagga 28781196  T
Q  116 tttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 215  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  28781197 tttttattcctgtgttttctatcaactatgccacttcaaaattttgcttggacgaacttgttcacattattcattgctacaagacaaaaggtcgcctcgt 28781296  T
Q  216 cttgcctgttttct 229  Q
     |||||||||||||    
T  28781297 tttgcctgttttct 28781310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 16 - 229
Target Start/End: Original strand, 28786236 - 28786449
Alignment:
Q  16 cttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaa 115  Q
    |||| ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |    
T  28786236 cttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctagga 28786335  T
Q  116 tttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 215  Q
    |||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  28786336 tttttattcctgtgttttctatcaactacgccacatcaaaattttgcttggacgaacttgttcacattattcattgctacaagacaaaaggtcgcctcgt 28786435  T
Q  216 cttgcctgttttct 229  Q
     |||||||||||||    
T  28786436 tttgcctgttttct 28786449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 16 - 229
Target Start/End: Original strand, 28792357 - 28792570
Alignment:
Q  16 cttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaa 115  Q
    |||| ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |    
T  28792357 cttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctagga 28792456  T
Q  116 tttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 215  Q
    |||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  28792457 tttttattcctgtgttttctatcaactacgccacatcaaaattttgcttggacgaacttgttcacattattcattgctacaagacaaaaggtcgcctcgt 28792556  T
Q  216 cttgcctgttttct 229  Q
     |||||||||||||    
T  28792557 tttgcctgttttct 28792570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 16 - 229
Target Start/End: Complemental strand, 27718608 - 27718395
Alignment:
Q  16 cttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaa 115  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |    
T  27718608 cttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctagga 27718509  T
Q  116 tttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 215  Q
    |||||||||||||||||||||||||||||||||||||    ||||| |||||||||||||| ||||| ||||| ||||| ||||||||||||||||||||    
T  27718508 tttttattcctgtgttttctatcaactatgcctcttcttcgttttgtttggacgaacttgtccacataattcactgctacaagacaaagggtcgcctcgt 27718409  T
Q  216 cttgcctgttttct 229  Q
     |||||||||||||    
T  27718408 tttgcctgttttct 27718395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 16 - 229
Target Start/End: Complemental strand, 27611231 - 27611018
Alignment:
Q  16 cttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaa 115  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||| |    
T  27611231 cttactgacaagggaatccataccttcattgatgacaatgatcttccaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctagga 27611132  T
Q  116 tttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 215  Q
    |||||||||||||||||||||||||||||||||||||    ||||| |||||||||||||| ||||| ||||| ||||| ||||||||||||||||||||    
T  27611131 tttttattcctgtgttttctatcaactatgcctcttcttcgttttgtttggacgaacttgtccacataattcactgctacaagacaaagggtcgcctcgt 27611032  T
Q  216 cttgcctgttttct 229  Q
     |||||||||||||    
T  27611031 tttgcctgttttct 27611018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 16 - 229
Target Start/End: Complemental strand, 27725074 - 27724861
Alignment:
Q  16 cttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaa 115  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |    
T  27725074 cttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctagga 27724975  T
Q  116 tttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 215  Q
    ||||||||||||||||||||||||||||||||| |||    ||||| |||||||||||||| ||||| ||||| ||||| ||||||||||||||||||||    
T  27724974 tttttattcctgtgttttctatcaactatgcctattcttcgttttgtttggacgaacttgtccacataattcactgctacaagacaaagggtcgcctcgt 27724875  T
Q  216 cttgcctgttttct 229  Q
     |||||||||||||    
T  27724874 tttgcctgttttct 27724861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 16 - 229
Target Start/End: Complemental strand, 27698723 - 27698510
Alignment:
Q  16 cttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaa 115  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |    
T  27698723 cttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctagga 27698624  T
Q  116 tttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 215  Q
    |||||||||||||||||||| |||||||||| |||||   |||||| |||||||||||||| ||||| ||||| |||||  |||||||||||||||||||    
T  27698623 tttttattcctgtgttttctctcaactatgcatcttcttcattttgtttggacgaacttgtccacataattcactgctacgagacaaagggtcgcctcgt 27698524  T
Q  216 cttgcctgttttct 229  Q
     |||||||||||||    
T  27698523 tttgcctgttttct 27698510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 16 - 229
Target Start/End: Original strand, 26646437 - 26646650
Alignment:
Q  16 cttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaa 115  Q
    |||| |||||||||||| || ||||||||||||||   ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  26646437 cttactgacaagggaattcacaccttcattgatgattgtgatcttaagagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagga 26646536  T
Q  116 tttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 215  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||| ||||||||||| |||||||||||||| |||||    
T  26646537 tttttattcctgtgttttctatcaactatgcctcttctaaattttgtttggacgaacttgtccacatcattcattgctacaagacaaagggtcgtctcgt 26646636  T
Q  216 cttgcctgttttct 229  Q
     ||||| |||||||    
T  26646637 tttgcccgttttct 26646650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 16 - 229
Target Start/End: Original strand, 26752405 - 26752618
Alignment:
Q  16 cttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaa 115  Q
    |||| |||||||||||| || ||||||||||||||   ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  26752405 cttactgacaagggaattcacaccttcattgatgattgtgatcttaagagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagga 26752504  T
Q  116 tttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 215  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||| ||||||||||| |||||||||||||| |||||    
T  26752505 tttttattcctgtgttttctatcaactatgcctcttctaaattttgtttggacgaacttgtccacatcattcattgctacaagacaaagggtcgtctcgt 26752604  T
Q  216 cttgcctgttttct 229  Q
     ||||| |||||||    
T  26752605 tttgcccgttttct 26752618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 16 - 229
Target Start/End: Original strand, 27678904 - 27679117
Alignment:
Q  16 cttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaa 115  Q
    |||| ||||||||||||| | |||||||||||| | |||| |||||||||||||||||||||||||||||||||  |||||||||||||||| ||||| |    
T  27678904 cttactgacaagggaatcaacaccttcattgataagaatggtcttcaaagaggagatgaaatcacaccatcacttctcaaggccattgaagagtctagga 27679003  T
Q  116 tttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 215  Q
    |||||||||||||||||||||||||||||||||||||   |||||| |||||||||||||| ||||| ||||| ||||| ||||||||||||||||||||    
T  27679004 tttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagggtcgcctcgt 27679103  T
Q  216 cttgcctgttttct 229  Q
      ||||||||||||    
T  27679104 tctgcctgttttct 27679117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 16 - 229
Target Start/End: Complemental strand, 27593249 - 27593036
Alignment:
Q  16 cttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaa 115  Q
    |||| ||||||||||||| | ||||||||||||||||||| ||||||||||||| |||||||||||||||||||  |||||||||||||||| ||||| |    
T  27593249 cttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctagga 27593150  T
Q  116 tttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 215  Q
    |||||||||||||||||||||||||||||||||||||    ||||| |||||||||||||  ||||| ||||||||||| ||||||||||||||||  ||    
T  27593149 tttttattcctgtgttttctatcaactatgcctcttcttcgttttgtttggacgaacttgaccacatcattcattgctacaagacaaagggtcgccctgt 27593050  T
Q  216 cttgcctgttttct 229  Q
     |||||||||||||    
T  27593049 tttgcctgttttct 27593036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 16 - 229
Target Start/End: Complemental strand, 27604934 - 27604721
Alignment:
Q  16 cttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaa 115  Q
    |||| |||||||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||  ||||||||||||| ||||| || |    
T  27604934 cttactgacaagggaattcataccttcattgatgaaaatgatcttcgaagaggagatgaaatcacaccagcacttctcaaggccattgatgaatccagga 27604835  T
Q  116 tttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 215  Q
    ||||||||||||||||||||||||| |||||||||||    ||||| ||||| |||||||||||||| ||||||||||| | ||||||||||||| ||||    
T  27604834 tttttattcctgtgttttctatcaaatatgcctcttcttccttttgtttggatgaacttgttcacatcattcattgctacacgacaaagggtcgcgtcgt 27604735  T
Q  216 cttgcctgttttct 229  Q
     |||||||||||||    
T  27604734 tttgcctgttttct 27604721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 21 - 234
Target Start/End: Complemental strand, 27677838 - 27677625
Alignment:
Q  21 tgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaattttt 120  Q
    ||||||||||||||| |||||||||||  |  |||| ||||||||||| ||||||||||||||||||||  |||||||||||||||| ||||| ||||||    
T  27677838 tgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggattttt 27677739  T
Q  121 attcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgtcttgc 220  Q
    ||| ||||||||||||||||||||||||||||   |||||| |||||||||||||| ||||| ||||| ||||| ||||||||||||||||||||  |||    
T  27677738 attgctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagggtcgcctcgttctgc 27677639  T
Q  221 ctgttttctgtgct 234  Q
    ||||||||| ||||    
T  27677638 ctgttttctttgct 27677625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 21 - 227
Target Start/End: Complemental strand, 27706626 - 27706420
Alignment:
Q  21 tgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaattttt 120  Q
    ||||||||||||||| |||||||||||  |  |||| ||||||||| | ||||||||||||||||||||  |||||||||||||||| ||||| ||||||    
T  27706626 tgacaagggaatccacaccttcattgacaatcatgaacttcaaagaagggatgaaatcacaccatcacttctcaaggccattgaagagtctaggattttt 27706527  T
Q  121 attcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgtcttgc 220  Q
    ||||||||||||||||||| ||||||||||||   |||||| |||||||||||||| ||||| ||||| ||||| ||||||||||||||||||||  |||    
T  27706526 attcctgtgttttctatcacctatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagggtcgcctcgttctgc 27706427  T
Q  221 ctgtttt 227  Q
    |||||||    
T  27706426 ctgtttt 27706420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 16 - 207
Target Start/End: Original strand, 26655947 - 26656138
Alignment:
Q  16 cttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaa 115  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||| | ||||||||||||||||| || |    
T  26655947 cttattgataagggaatccatactttcattgatgacaatgatcttctcagaggagatgaaatcacaccatcactcgttaaggccattgaagaatccagga 26656046  T
Q  116 tttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggt 207  Q
    ||||||||||  | ||||||  ||||||||| |||||   |||||| |||||||||||||| ||||| ||||||||||||||||||||||||    
T  26656047 tttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcattgctataagacaaagggt 26656138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 16 - 207
Target Start/End: Original strand, 26761918 - 26762109
Alignment:
Q  16 cttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaa 115  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||| | ||||||||||||||||| || |    
T  26761918 cttattgataagggaatccatactttcattgatgacaatgatcttctcagaggagatgaaatcacaccatcactcgttaaggccattgaagaatccagga 26762017  T
Q  116 tttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggt 207  Q
    ||||||||||  | ||||||  ||||||||| |||||   |||||| |||||||||||||| ||||| ||||||||||||||||||||||||    
T  26762018 tttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcattgctataagacaaagggt 26762109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 23 - 227
Target Start/End: Original strand, 26884128 - 26884334
Alignment:
Q  23 acaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttat 122  Q
    ||||||||||||| |||||||||||||| ||| |||||| |||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26884128 acaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttat 26884227  T
Q  123 tcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcaca--ttattcattgctataagacaaagggtcgcctcgtcttgc 220  Q
    |||  | ||||||| ||||||||| |||||   |||||| |||||||||||||| ||||  | ||||| |||||  ||||||||||||||||||| ||||    
T  26884228 tccaatattttctaccaactatgcatcttcttcattttgtttggacgaacttgtccacatgtcattcactgctacgagacaaagggtcgcctcgttttgc 26884327  T
Q  221 ctgtttt 227  Q
    |||||||    
T  26884328 ctgtttt 26884334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 16 - 227
Target Start/End: Complemental strand, 27531426 - 27531215
Alignment:
Q  16 cttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaa 115  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  || ||||||||| ||||||| |    
T  27531426 cttactgacaagggaatctataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactaaaaaatgccattgaaaaatctagga 27531327  T
Q  116 tttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 215  Q
    |||||||||| || ||||||   |||||||| |||||   |||||| |||||||||||||||||||| | |||||||||  | ||||||||| | || ||    
T  27531326 tttttattcccgtattttctgaaaactatgcatcttcttcattttgtttggacgaacttgttcacatcactcattgctacgatacaaagggttgtcttgt 27531227  T
Q  216 cttgcctgtttt 227  Q
     |||||||||||    
T  27531226 tttgcctgtttt 27531215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 20 - 229
Target Start/End: Original strand, 25579681 - 25579890
Alignment:
Q  20 ttgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 119  Q
    ||||||||||||| | ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||    
T  25579681 ttgacaagggaattcgtaccttctttgatgataatgatcttcaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatctaggatttt 25579780  T
Q  120 tattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgtcttg 219  Q
    ||||||  | ||||||  ||||||||| |||||   |||||| |||||||||||||| ||||| ||||| ||||| ||||||||| || || | || |||    
T  25579781 tattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagagttgcttagtattg 25579880  T
Q  220 cctgttttct 229  Q
    || |||||||    
T  25579881 cccgttttct 25579890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 20 - 204
Target Start/End: Original strand, 25481704 - 25481888
Alignment:
Q  20 ttgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 119  Q
    ||||||||||||| | ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||     
T  25481704 ttgacaagggaattcgtactttcattgatgaaaatgatcttcaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatctaggatttg 25481803  T
Q  120 tattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaag 204  Q
    ||||||  | ||||||  ||||||||| |||||   |||||| |||||||||||||| ||||| ||||| ||||| |||||||||    
T  25481804 tattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaag 25481888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 20 - 204
Target Start/End: Original strand, 26142827 - 26143011
Alignment:
Q  20 ttgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 119  Q
    ||||||||||||| | ||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||    
T  26142827 ttgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatctaggatttt 26142926  T
Q  120 tattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaag 204  Q
    ||||||  | ||||||  ||||||||| |||||   |||||| |||||||||||||| ||||| ||||| ||||| |||||||||    
T  26142927 tattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaag 26143011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 16 - 229
Target Start/End: Original strand, 31284246 - 31284459
Alignment:
Q  16 cttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaa 115  Q
    |||| ||||||||||||||| |||||||||||||| | ||| ||||||||||| |||||||||||||||||||||  ||| ||||||||||| ||||| |    
T  31284246 cttactgacaagggaatccacaccttcattgatgatagtgaacttcaaagaggggatgaaatcacaccatcactcgacaatgccattgaagagtctagga 31284345  T
Q  116 tttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 215  Q
    ||||||| || |||||||||  |||||||||||||||    ||||| |||||||||||||| ||||| ||||| |  ||||||  ||| |||||||||||    
T  31284346 tttttatccccgtgttttctgccaactatgcctcttcgtcgttttgtttggacgaacttgtccacatcattcacttgtataagcaaaatggtcgcctcgt 31284445  T
Q  216 cttgcctgttttct 229  Q
     ||||| |||||||    
T  31284446 tttgcccgttttct 31284459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 16 - 207
Target Start/End: Complemental strand, 27338294 - 27338103
Alignment:
Q  16 cttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaa 115  Q
    |||||||||||||||||| | ||||||||||||||||| |||||| ||||||||||||||| ||||||||||||  |||||||||||||||| ||||| |    
T  27338294 cttattgacaagggaatcaaaaccttcattgatgacaacgatcttgaaagaggagatgaaagcacaccatcacttgtcaaggccattgaagagtctagga 27338195  T
Q  116 tttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggt 207  Q
    |||| |||||  | ||||||   |||||||| |||||   ||||||||||||||||||||| ||||| ||||| ||||| ||||||| ||||    
T  27338194 ttttgattcccatattttctgcaaactatgcatcttcttcattttgcttggacgaacttgtccacatcattcactgctacaagacaaggggt 27338103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 16 - 207
Target Start/End: Complemental strand, 27399034 - 27398843
Alignment:
Q  16 cttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaa 115  Q
    |||||||||||||||||| | ||||||||||||||||| |||||| ||||||||||||||| ||||||||||||  |||||||||||||||| ||||| |    
T  27399034 cttattgacaagggaatcaaaaccttcattgatgacaacgatcttgaaagaggagatgaaagcacaccatcacttgtcaaggccattgaagagtctagga 27398935  T
Q  116 tttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggt 207  Q
    |||| |||||  | ||||||   |||||||| |||||   ||||||||||||||||||||| ||||| ||||| ||||| ||||||| ||||    
T  27398934 ttttgattcccatattttctgcaaactatgcatcttcttcattttgcttggacgaacttgtccacatcattcactgctacaagacaaggggt 27398843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 173
Target Start/End: Original strand, 27229190 - 27229347
Alignment:
Q  16 cttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaa 115  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||| | |    
T  27229190 cttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagacgaaatcacaccatcactcgtcaaggccattgacgaatctcgga 27229289  T
Q  116 tttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaact 173  Q
    ||||||||||  | ||||||  ||||||||| |||||   |||||| ||| |||||||    
T  27229290 tttttattcccatattttctgccaactatgcatcttcttcattttgtttgaacgaact 27229347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 20 - 229
Target Start/End: Original strand, 25538502 - 25538711
Alignment:
Q  20 ttgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 119  Q
    |||||||||||||   ||| ||||| ||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||| |||||||||||||||||    
T  25538502 ttgacaagggaattagtactttcatagatgataatgatcttgaaagaggagatgaaatcacaccatcacttgtcaaggccatcgaagaatctagaatttt 25538601  T
Q  120 tattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgtcttg 219  Q
    ||||||  | ||||||  ||||||||| |||||   |||||| |||||||||||||| || || ||||| ||||| ||||||||| || || | || |||    
T  25538602 tattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccagatcattcactgctacaagacaaagagttgcttagtattg 25538701  T
Q  220 cctgttttct 229  Q
    || |||||||    
T  25538702 cccgttttct 25538711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 20 - 229
Target Start/End: Original strand, 26055888 - 26056097
Alignment:
Q  20 ttgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 119  Q
    |||||||||||||  |||| ||||||||||| |||||||||||||||||||||||||||||| |||||||  |||||||||| ||||||||| | |||||    
T  26055888 ttgacaagggaattaatactttcattgatgaaaatgatcttcaaagaggagatgaaatcacatcatcacttgtcaaggccatcgaagaatctgggatttt 26055987  T
Q  120 tattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgtcttg 219  Q
    ||||||  | ||||||  ||||||||| |||||   |||||| |||||||||||||| ||||| ||||| ||||| || |||||| || || | || |||    
T  26055988 tattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaacacaaagagttgcttagtattg 26056087  T
Q  220 cctgttttct 229  Q
    || |||||||    
T  26056088 cccgttttct 26056097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 20 - 229
Target Start/End: Original strand, 26075858 - 26076067
Alignment:
Q  20 ttgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 119  Q
    |||||||||||||  |||| ||||||||||| |||||||||||||||||||||||||||||| |||||||  |||||||||| ||||||||| | |||||    
T  26075858 ttgacaagggaattaatactttcattgatgaaaatgatcttcaaagaggagatgaaatcacatcatcacttgtcaaggccatcgaagaatctgggatttt 26075957  T
Q  120 tattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgtcttg 219  Q
    ||||||  | ||||||  ||||||||| |||||   |||||| |||||||||||||| ||||| ||||| ||||| || |||||| || || | || |||    
T  26075958 tattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaacacaaagagttgcttagtattg 26076057  T
Q  220 cctgttttct 229  Q
    || |||||||    
T  26076058 cccgttttct 26076067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 23 - 182
Target Start/End: Original strand, 28234529 - 28234688
Alignment:
Q  23 acaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttat 122  Q
    ||||||||||||| ||||||||||||||||  || |||||| ||||||||||||| |||||||||||  |||||||||||||||| ||||| ||||| ||    
T  28234529 acaagggaatccacaccttcattgatgacagggagcttcaaggaggagatgaaataacaccatcacttttcaaggccattgaagagtctaggattttcat 28234628  T
Q  123 tcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacat 182  Q
    |||||| || |||||||| ||||| |||||   ||||||||||||||||||||| |||||    
T  28234629 tcctgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacat 28234688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 62 - 179
Target Start/End: Complemental strand, 25507092 - 25506975
Alignment:
Q  62 aaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctcttcaaaattttg 161  Q
    |||||||||||||||||||||||||| || |||  ||||||||||||||||| ||||||||||| ||  |||||||||||||||||||||||||||||||    
T  25507092 aaagaggagatgaaatcacaccatcagtcgtcatcgccattgaagaatctaggatttttattccggttctttctatcaactatgcctcttcaaaattttg 25506993  T
Q  162 cttggacgaacttgttca 179  Q
     ||||| |||||||||||    
T  25506992 tttggaggaacttgttca 25506975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 204
Target Start/End: Original strand, 26048806 - 26048991
Alignment:
Q  19 attgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaattt 118  Q
    ||||||||||||||   ||| ||||||||||| ||||||||| ||||||||||||||||||||||   |||  |||||||||| ||||||||||| ||||    
T  26048806 attgacaagggaatttgtactttcattgatgataatgatcttgaaagaggagatgaaatcacacccaaacttgtcaaggccatggaagaatctaggattt 26048905  T
Q  119 ttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaag 204  Q
    |||||||  | ||||||  ||||||||| |||||   |||||| |||||||||||||| ||||| ||||| ||||| |||||||||    
T  26048906 ttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaag 26048991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 204
Target Start/End: Original strand, 26069975 - 26070160
Alignment:
Q  19 attgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaattt 118  Q
    ||||||||||||||   ||| ||||||||||| ||||||||| ||||||||||||||||||||||   |||  |||||||||| ||||||||||| ||||    
T  26069975 attgacaagggaatttgtactttcattgatgataatgatcttgaaagaggagatgaaatcacacccaaacttgtcaaggccatggaagaatctaggattt 26070074  T
Q  119 ttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaag 204  Q
    |||||||  | ||||||  ||||||||| |||||   |||||| |||||||||||||| ||||| ||||| ||||| |||||||||    
T  26070075 ttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaag 26070160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 16 - 221
Target Start/End: Original strand, 26622934 - 26623139
Alignment:
Q  16 cttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaa 115  Q
    |||| ||||||||||||||| ||||||||||||||   ||| ||||||||||| || ||||||| |||||||||   ||| || || ||||| ||||| |    
T  26622934 cttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggacgaaatcaaaccatcacttgacaatgctatcgaagagtctagga 26623033  T
Q  116 tttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 215  Q
    ||||||||||||||||||||  ||||||||| | |||   |||||| ||||| |||||||| ||||| ||||| ||||| || ||||||||||| |||||    
T  26623034 tttttattcctgtgttttctcccaactatgcatattcttcattttgtttggatgaacttgtccacatcattcactgctacaaaacaaagggtcgtctcgt 26623133  T
Q  216 cttgcc 221  Q
     |||||    
T  26623134 tttgcc 26623139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 16 - 221
Target Start/End: Original strand, 26728912 - 26729117
Alignment:
Q  16 cttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaa 115  Q
    |||| ||||||||||||||| ||||||||||||||   ||| ||||||||||| || ||||||| |||||||||   ||| || || ||||| ||||| |    
T  26728912 cttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggacgaaatcaaaccatcacttgacaatgctatcgaagagtctagga 26729011  T
Q  116 tttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 215  Q
    ||||||||||||||||||||  ||||||||| | |||   |||||| ||||| |||||||| ||||| ||||| ||||| || ||||||||||| |||||    
T  26729012 tttttattcctgtgttttctcccaactatgcatattcttcattttgtttggatgaacttgtccacatcattcactgctacaaaacaaagggtcgtctcgt 26729111  T
Q  216 cttgcc 221  Q
     |||||    
T  26729112 tttgcc 26729117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 22 - 229
Target Start/End: Original strand, 26823804 - 26824011
Alignment:
Q  22 gacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaattttta 121  Q
    |||||||||||||| |||||  |||||||   ||| ||||||||||| ||| |||||  || ||||||||  || ||||||||||| ||||| |||||||    
T  26823804 gacaagggaatccacaccttttttgatgatcgtgaacttcaaagaggggataaaatcgaacaatcactcaataatgccattgaagagtctaggattttta 26823903  T
Q  122 ttcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgtcttgcc 221  Q
    ||||||||||||||  |||||||||||||||   |||||| |||||||||||||| ||||| ||||    ||| |||  |||||| |||||||| |||||    
T  26823904 ttcctgtgttttctgccaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcgcgtctacaaggaaaaggggcgcctcgttttgcc 26824003  T
Q  222 tgttttct 229  Q
    ||||||||    
T  26824004 tgttttct 26824011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 229
Target Start/End: Original strand, 26861574 - 26861784
Alignment:
Q  16 cttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaa 115  Q
    |||| |||||||||||| || |||||||| |||||   ||| ||||||||||| |||||||||| |  |||||||  ||| ||||||||||| |||||||    
T  26861574 cttactgacaagggaattcacaccttcatggatgatcgtgaacttcaaagaggggatgaaatcaaaagatcactcgacaatgccattgaagagtctagaa 26861673  T
Q  116 tttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 215  Q
    |||| |||||||||||||||  |||||||||||||||   |||||| ||||| |||||||| || || ||| | |||   |||  |||||||||| ||||    
T  26861674 ttttcattcctgtgttttctgccaactatgcctcttcgtcattttgtttggatgaacttgtccaaatcattaactgc---aaggaaaagggtcgcgtcgt 26861770  T
Q  216 cttgcctgttttct 229  Q
     |||||||||||||    
T  26861771 tttgcctgttttct 26861784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 193
Target Start/End: Original strand, 28181077 - 28181249
Alignment:
Q  21 tgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaattttt 120  Q
    ||||||||||||||  |||||||| |||||||  || |||||| |||| || ||||| ||| |||||||  |||||||||||||||| ||||| |||||     
T  28181077 tgacaagggaatccgaaccttcatggatgacagagagcttcaaggaggtgaagaaataacatcatcacttttcaaggccattgaagagtctaggattttc 28181176  T
Q  121 attcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgct 193  Q
    ||||| || || |||||||| ||||| |||||   ||||||||||||||||||||| ||||| ||||| ||||    
T  28181177 attcccgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcactgct 28181249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 25 - 193
Target Start/End: Original strand, 28226917 - 28227085
Alignment:
Q  25 aagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattc 124  Q
    |||||||| || || ||| ||||||| |  || |||||| |||| |||||||| ||| |||||||  |||||| ||||||||||||||| ||||| ||||    
T  28226917 aagggaattcacacattctttgatgatagagagcttcaaggaggtgatgaaataacatcatcacttttcaaggtcattgaagaatctaggattttcattc 28227016  T
Q  125 ctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgct 193  Q
    |||| || |||||||| ||||| |||||   ||||||||||||||||||||| ||||| ||||||||||    
T  28227017 ctgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcattgct 28227085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 21 - 182
Target Start/End: Original strand, 28185329 - 28185490
Alignment:
Q  21 tgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaattttt 120  Q
    ||||||||||||||  |||||||| |||||||  || |||||| |||| || ||||| ||| |||||||  |||||||||||||||| ||||| |||||     
T  28185329 tgacaagggaatccgaaccttcatggatgacagagagcttcaaggaggtgaagaaataacatcatcacttttcaaggccattgaagagtctaggattttc 28185428  T
Q  121 attcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacat 182  Q
    ||||| || || |||||||| ||||| |||||   ||||||||||||||||||||| |||||    
T  28185429 attcccgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacat 28185490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 36 - 193
Target Start/End: Original strand, 28325459 - 28325616
Alignment:
Q  36 taccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttct 135  Q
    |||||||||||||||||| || |||||| |||| || ||||| ||||| |||||  |||||||||||||||| ||||| ||||| |||||| | || |||    
T  28325459 taccttcattgatgacaaagaccttcaacgaggtgacgaaataacaccgtcacttttcaaggccattgaagagtctaggattttcattcctattttgtct 28325558  T
Q  136 atcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgct 193  Q
    ||||| ||||| |||||    ||||||||||| |||||||| ||||||||||| ||||    
T  28325559 atcaattatgcttcttcttccttttgcttggatgaacttgtccacattattcactgct 28325616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 37 - 193
Target Start/End: Original strand, 28242783 - 28242939
Alignment:
Q  37 accttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttcta 136  Q
    ||||||||||||||||  || |||| | |||| ||  |||| |||||||||||  |||||||||||||||| ||||| ||||| |||||||| || ||||    
T  28242783 accttcattgatgacagagaacttccaggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtcta 28242882  T
Q  137 tcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgct 193  Q
    |||| ||||| |||||   ||||||||||||||||||||| ||||| ||||| ||||    
T  28242883 tcaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcactgct 28242939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 32 - 207
Target Start/End: Original strand, 28149912 - 28150086
Alignment:
Q  32 tccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgtt 131  Q
    |||| |||||||||||||| |  || ||| || |||| || |||||||||||||||||| |||||||||||||||| || || ||||| |||||  | ||    
T  28149912 tccacaccttcattgatgatacggagctttaacgaggggacgaaatcacaccatcactc-tcaaggccattgaagagtccaggattttcattccaatctt 28150010  T
Q  132 ttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggt 207  Q
     |||||||||||| | |||||   |||||| |||||||||||||| ||||||||||| ||||  ||| ||||||||    
T  28150011 ctctatcaactatacttcttcttcattttgtttggacgaacttgtccacattattcactgcttcaaggcaaagggt 28150086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 182
Target Start/End: Original strand, 28139511 - 28139665
Alignment:
Q  28 ggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctg 127  Q
    |||||||| || || |||||||| |  || |||||| |||| || |||||  |||| |||||| | || ||||||||||||||||| ||||| || ||||    
T  28139511 ggaatccacacttttattgatgatagggagcttcaaggaggtgacgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctg 28139610  T
Q  128 tgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacat 182  Q
    ||||||| |||||||||||||||||    |||||||||||||||||||| |||||    
T  28139611 tgttttccatcaactatgcctcttcttcgttttgcttggacgaacttgtccacat 28139665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 193
Target Start/End: Complemental strand, 28297921 - 28297765
Alignment:
Q  37 accttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttcta 136  Q
    ||||||||||||||||  || ||| || |||| || ||||| |||||||||||  |||||  |||||||||  |||| ||||| |||||||| || ||||    
T  28297921 accttcattgatgacagagagcttaaaggaggtgacgaaataacaccatcacttttcaagcacattgaagagactaggattttcattcctgtcttatcta 28297822  T
Q  137 tcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgct 193  Q
     ||| ||||| |||||   ||||||||||||||||||||| ||||| ||||| ||||    
T  28297821 ccaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcactgct 28297765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 193
Target Start/End: Original strand, 28514152 - 28514308
Alignment:
Q  37 accttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttcta 136  Q
    ||||||||||||||||  || ||| || |||| || ||||| |||||||||||  |||||  |||||||||  |||| ||||| |||||||| || ||||    
T  28514152 accttcattgatgacagagagcttaaaggaggtgacgaaataacaccatcacttttcaagcacattgaagagactaggattttcattcctgtcttatcta 28514251  T
Q  137 tcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgct 193  Q
     ||| ||||| |||||   ||||||||||||||||||||| ||||| ||||| ||||    
T  28514252 ccaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcactgct 28514308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 182
Target Start/End: Original strand, 26937073 - 26937218
Alignment:
Q  37 accttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttcta 136  Q
    ||||||||||||||||| || || ||  ||||||| |||||||||||||||||  ||||||| |||||||| ||  | |||   || ||||| || ||||    
T  26937073 accttcattgatgacaaggagctccatggaggagaagaaatcacaccatcacttgtcaaggcaattgaagattccgggattgccatacctgtattctcta 26937172  T
Q  137 tcaactatgcctcttcaaaattttgcttggacgaacttgttcacat 182  Q
    ||||||||||| ||||   |||||| |||||||||||||| |||||    
T  26937173 tcaactatgccacttcttcattttgtttggacgaacttgtccacat 26937218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 21 - 193
Target Start/End: Original strand, 26848623 - 26848795
Alignment:
Q  21 tgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaattttt 120  Q
    |||||| |||||||  ||||||||||||||||| |||||||| || || ||||| |||||||| || ||| |||||  ||||||||| || || ||||      
T  26848623 tgacaatggaatccgaaccttcattgatgacaaggatcttcagagtggtgatgagatcacaccttcgctcctcaagaacattgaagactcgaggatttcc 26848722  T
Q  121 attcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgct 193  Q
    |||| ||| || |||   ||||||||| ||||    ||||| |||||||||||||| ||||| ||||||||||    
T  26848723 attcttgtattctctgagaactatgccacttcttcgttttgtttggacgaacttgtccacatcattcattgct 26848795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 173
Target Start/End: Complemental strand, 26893688 - 26893543
Alignment:
Q  28 ggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctg 127  Q
    ||||| || |||||||||||||| |  || ||||| ||||| || |||||| |||||||||| |||||||| |||||||| ||||  || |  ||||| |    
T  26893688 ggaattcacaccttcattgatgatacagagcttcatagaggtgacgaaatctcaccatcacttatcaaggcaattgaagagtctatgatatacattccag 26893589  T
Q  128 tgttttctatcaactatgcctcttcaaaattttgcttggacgaact 173  Q
    |  | |||||||||||||| ||||| | |||||| ||||| |||||    
T  26893588 tcctctctatcaactatgcttcttctatattttgtttggaagaact 26893543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 37 - 193
Target Start/End: Complemental strand, 26342142 - 26341986
Alignment:
Q  37 accttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttcta 136  Q
    |||||||||||||| |  || |||||  |||| ||  ||||||||| ||||||  |||| ||||||||||| || || ||||| |||||  | || || |    
T  26342142 accttcattgatgatagggagcttcatggaggtgacaaaatcacacaatcacttgtcaaagccattgaagagtccaggattttcattccaattttctcaa 26342043  T
Q  137 tcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgct 193  Q
    |||||||||| |||||    ||||| |||||||||||||| ||||| ||||||||||    
T  26342042 tcaactatgcttcttcttcgttttgtttggacgaacttgtccacatcattcattgct 26341986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 26949624 - 26949720
Alignment:
Q  21 tgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatt 117  Q
    ||||||||||||||  |||||||||||||| || || ||||| | ||| || ||||||||||| |||||| |||||   ||||||||||| ||||||    
T  26949624 tgacaagggaatccgaaccttcattgatgataaggagcttcagaaaggtgacgaaatcacaccttcactcctcaagagaattgaagaatcgagaatt 26949720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 37 - 113
Target Start/End: Original strand, 29826006 - 29826082
Alignment:
Q  37 accttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctag 113  Q
    ||||||||||||||||| || ||||||||||| || ||||||||||| |||||  | ||||| ||| ||||||||||    
T  29826006 accttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcaattcaagaatctag 29826082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 212
Target Start/End: Original strand, 2184288 - 2184442
Alignment:
Q  58 cttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctcttcaaaat 157  Q
    |||||| |||| | |||||| ||| ||||||| || || ||||||||||| || |||||||| || ||||| || || |  |||||||| |||||   ||    
T  2184288 cttcaacgagggggtgaaataacagcatcacttatgaaagccattgaagagtccagaattttcatccctgttttctcaaagaactatgcttcttcttcat 2184387  T
Q  158 tttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcct 212  Q
    |||| |||||||||||||| ||||| |||| || ||  ||| ||||||| |||||    
T  2184388 tttgtttggacgaacttgtccacatcattcgttactccaagtcaaagggacgcct 2184442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 107
Target Start/End: Original strand, 26635653 - 26635739
Alignment:
Q  21 tgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaaga 107  Q
    |||||| |||||| | ||||||||||||||||| || ||| ||| ||| |||||||||||||| || ||| |||||  |||||||||    
T  26635653 tgacaaaggaatcaacaccttcattgatgacaaggagcttaaaaaaggggatgaaatcacaccttcgctcctcaagagcattgaaga 26635739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 107
Target Start/End: Original strand, 26741619 - 26741705
Alignment:
Q  21 tgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaaga 107  Q
    |||||| |||||| | ||||||||||||||||| || ||| ||| ||| |||||||||||||| || ||| |||||  |||||||||    
T  26741619 tgacaaaggaatcaacaccttcattgatgacaaggagcttaaaaaaggggatgaaatcacaccttcgctcctcaagagcattgaaga 26741705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 229
Target Start/End: Complemental strand, 27427751 - 27427622
Alignment:
Q  100 attgaagaatctagaatttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataaga 199  Q
    ||||||||||| || ||||| |||||  | ||||||  ||||||||| |||||   || ||| ||||||  |||||| ||||| ||||| ||||| || |    
T  27427751 attgaagaatccaggattttgattcccatattttctgccaactatgcatcttcttcatcttgtttggacacacttgtccacatcattcactgctacaaaa 27427652  T
Q  200 caaagggtcgcctcgtcttgcctgttttct 229  Q
    | |||||| ||||||| |||||||||||||    
T  27427651 ccaagggttgcctcgttttgcctgttttct 27427622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 26811472 - 26811556
Alignment:
Q  21 tgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaa 105  Q
    |||||| |||||||  ||||||||||||||||| || ||||| ||||| || ||||||||||| || ||| |||||  |||||||    
T  26811472 tgacaaaggaatccgaaccttcattgatgacaaggagcttcagagaggtgacgaaatcacaccttcgctcctcaagagcattgaa 26811556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 28491744 - 28491660
Alignment:
Q  21 tgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaa 105  Q
    |||||| ||| ||| ||| ||||| || ||| | || ||||||| ||| || ||||||||||||||||||||||| |||||||||    
T  28491744 tgacaaaggagtccgtactttcatggacgacgaggagcttcaaaaaggtgaagaaatcacaccatcactcatcaaagccattgaa 28491660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 29804154 - 29804070
Alignment:
Q  21 tgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaa 105  Q
    |||||| ||| ||| ||| ||||| || ||| | || ||||||| ||| || ||||||||||||||||||||||| |||||||||    
T  29804154 tgacaaaggagtccgtactttcatggacgacgaggagcttcaaaaaggtgaagaaatcacaccatcactcatcaaagccattgaa 29804070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 211
Target Start/End: Original strand, 2184880 - 2185051
Alignment:
Q  40 ttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttctatca 139  Q
    ||||| |||||| | || |||||| |||| | |||||| |||||||| ||  | || |||||||||||||| |||||||| || ||||| || || |       
T  2184880 ttcatggatgacgaagagcttcaacgagggggtgaaataacaccatcgcttgtgaaagccattgaagaatccagaattttcatccctgttttctcaaagg 2184979  T
Q  140 actatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcc 211  Q
    ||||||| |||||   |||||| |||||||||||||| || || |||| |||||  ||| ||||||| ||||    
T  2184980 actatgcttcttcttcattttgtttggacgaacttgtccatatcattcgttgctccaagtcaaagggacgcc 2185051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 107
Target Start/End: Original strand, 29467797 - 29467876
Alignment:
Q  28 ggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaaga 107  Q
    ||||| || |||||||| |||||  | || ||||||| ||| || ||||||||||||||||||||||| || ||||||||    
T  29467797 ggaattcacaccttcatggatgatgaagaacttcaaaaaggcgaagaaatcacaccatcactcatcaaagctattgaaga 29467876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 26617305 - 26617351
Alignment:
Q  37 accttcattgatgacaatgatcttcaaagaggagatgaaatcacacc 83  Q
    ||||||||||||||||| || ||||| ||||| ||||||||||||||    
T  26617305 accttcattgatgacaaggagcttcagagaggtgatgaaatcacacc 26617351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 26723233 - 26723279
Alignment:
Q  37 accttcattgatgacaatgatcttcaaagaggagatgaaatcacacc 83  Q
    ||||||||||||||||| || ||||| ||||| ||||||||||||||    
T  26723233 accttcattgatgacaaggagcttcagagaggtgatgaaatcacacc 26723279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 26959128 - 26959190
Alignment:
Q  21 tgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacacc 83  Q
    |||||| |||||| | ||||||||||||||||| || ||| ||| ||| ||||||||||||||    
T  26959128 tgacaaaggaatcgacaccttcattgatgacaaagagcttaaaaaaggggatgaaatcacacc 26959190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 27665341 - 27665272
Alignment:
Q  21 tgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactc 90  Q
    |||||| |||||||| ||||||||||||||||| || |||| ||  || || ||||||||||| ||||||    
T  27665341 tgacaaaggaatccacaccttcattgatgacaaggagcttccaactggtgacgaaatcacaccttcactc 27665272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 25071622 - 25071718
Alignment:
Q  21 tgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatt 117  Q
    |||||| |||||||| ||||| ||||||||||| || ||| | ||||| || ||||||||||| || |||  ||||  ||||||||| || ||||||    
T  25071622 tgacaaaggaatccacacctttattgatgacaaagagcttaagagaggtgacgaaatcacaccttcgctccgcaagagcattgaagattcgagaatt 25071718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 27214380 - 27214440
Alignment:
Q  21 tgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcaca 81  Q
    |||||| |||||||  ||||||||||||||||| || ||||| ||||| || |||||||||    
T  27214380 tgacaaaggaatccgaaccttcattgatgacaaggagcttcagagaggtgacgaaatcaca 27214440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 27234848 - 27234788
Alignment:
Q  21 tgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcaca 81  Q
    |||||| |||||||  ||||||||||||||||| || ||||| ||||| || |||||||||    
T  27234848 tgacaaaggaatccgaaccttcattgatgacaaggagcttcagagaggtgacgaaatcaca 27234788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 170; Significance: 2e-91; HSPs: 2)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 16 - 229
Target Start/End: Complemental strand, 13861 - 13648
Alignment:
Q  16 cttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaa 115  Q
    |||| ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |    
T  13861 cttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctagga 13762  T
Q  116 tttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 215  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  13761 tttttattcctgtgttttctatcaactacgccacttcaaaattttgcttggacgaacttgttcacattattcattgctacaagacaaaaggtcgcctcgt 13662  T
Q  216 cttgcctgttttct 229  Q
     |||||||||||||    
T  13661 tttgcctgttttct 13648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 16 - 229
Target Start/End: Complemental strand, 4900 - 4687
Alignment:
Q  16 cttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaa 115  Q
    |||| ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||| |||||||| |    
T  4900 cttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatccctccgcaaggccattgatgaatctagga 4801  T
Q  116 tttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 215  Q
    |||||||||||||||||||||||  |||||||| |||    ||||| |||||||||||||| ||||| ||||| ||||| ||||||||||||||||||||    
T  4800 tttttattcctgtgttttctatcttctatgccttttcttcgttttgtttggacgaacttgtccacataattcactgctacaagacaaagggtcgcctcgt 4701  T
Q  216 cttgcctgttttct 229  Q
     |||||||||||||    
T  4700 tttgcctgttttct 4687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 166; Significance: 6e-89; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 16 - 229
Target Start/End: Original strand, 7483 - 7696
Alignment:
Q  16 cttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaa 115  Q
    |||| ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |    
T  7483 cttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctagga 7582  T
Q  116 tttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 215  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||||||||||    
T  7583 tttttattcctgtgttttctatcaactacgccacttcaaaattttgcttggacgaacttgttcacattattcattgctacaagacagaaggtcgcctcgt 7682  T
Q  216 cttgcctgttttct 229  Q
     |||||||||||||    
T  7683 tttgcctgttttct 7696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 150; Significance: 2e-79; HSPs: 2)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 16 - 229
Target Start/End: Complemental strand, 14584 - 14372
Alignment:
Q  16 cttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaa 115  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |    
T  14584 cttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctagga 14485  T
Q  116 tttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 215  Q
    ||||||||||||||||||||||||||||||||| |||    ||||| |||||||||||||| ||||| ||||| ||||| ||||||||||||||||||||    
T  14484 tttttattcctgtgttttctatcaactatgcct-ttcttcgttttgtttggacgaacttgtccacataattcactgctacaagacaaagggtcgcctcgt 14386  T
Q  216 cttgcctgttttct 229  Q
     |||||||||||||    
T  14385 tttgcctgttttct 14372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 16 - 227
Target Start/End: Complemental strand, 3651 - 3439
Alignment:
Q  16 cttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaa 115  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |    
T  3651 cttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctagga 3552  T
Q  116 tttttattcctgtgttttctatcaa-ctatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcg 214  Q
    ||||||||||||||||||||||||| ||||||||||||   |||||| |||||||||||||| ||||| ||||| ||||| |||||||||||||||||||    
T  3551 tttttattcctgtgttttctatcaacctatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagggtcgcctcg 3452  T
Q  215 tcttgcctgtttt 227  Q
    |  ||||||||||    
T  3451 ttctgcctgtttt 3439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1254 (Bit Score: 114; Significance: 6e-58; HSPs: 1)
Name: scaffold1254
Description:

Target: scaffold1254; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 16 - 161
Target Start/End: Complemental strand, 146 - 1
Alignment:
Q  16 cttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaa 115  Q
    |||| ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |    
T  146 cttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctagga 47  T
Q  116 tttttattcctgtgttttctatcaactatgcctcttcaaaattttg 161  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||    
T  46 tttttattcctgtgttttctatcaactacgccacttcaaaattttg 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 112; Significance: 9e-57; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 22 - 229
Target Start/End: Complemental strand, 28164572 - 28164365
Alignment:
Q  22 gacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaattttta 121  Q
    ||||||||||| || || |||||||||||   ||||||| | |||||||| ||||||||||| ||| ||||||||||||||||| ||||| |||||||||    
T  28164572 gacaagggaattcacacattcattgatgattgtgatcttgagagaggagaagaaatcacaccgtcattcatcaaggccattgaaaaatcttgaattttta 28164473  T
Q  122 ttcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgtcttgcc 221  Q
    |||||||||| ||||||||||||||||||||   |||||| |||||||||||||| ||||| ||||| ||||| ||||||||||||||||| || |||||    
T  28164472 ttcctgtgttatctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagggtcgcctagttttgcc 28164373  T
Q  222 tgttttct 229  Q
    ||||||||    
T  28164372 tgttttct 28164365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 16 - 209
Target Start/End: Complemental strand, 268573 - 268380
Alignment:
Q  16 cttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaa 115  Q
    |||| ||||||||||||||| ||||||||||||||   ||| ||||||||||| |||||||||| ||||||||||  ||| ||||||||||| ||||| |    
T  268573 cttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggatgaaatcaaaccatcactcgacaatgccattgaagagtctagga 268474  T
Q  116 tttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcg 209  Q
    |||||||||||||||||||||||||||||||||||||   |||||| |||||||||||||| ||||| ||||| ||||| |||| |||||||||    
T  268473 tttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagaaaaagggtcg 268380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 21 - 229
Target Start/End: Complemental strand, 28127891 - 28127682
Alignment:
Q  21 tgacaagggaatccataccttcattgatgacaatgatcttcaaagaggag-atgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 119  Q
    ||||||||||||||| || |||||||||||   | ||||| | ||||||| |  |||||||||| |||||  | ||||||||||||||||||||||||||    
T  28127891 tgacaagggaatccacacattcattgatgattgtaatcttgagagaggagaaaaaaatcacaccgtcacttttaaaggccattgaagaatctagaatttt 28127792  T
Q  120 tattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgtcttg 219  Q
    ||||||||| ||||||| |||||||||||||||   |||||| |||||||||||||| ||||| ||||| ||||| ||||||||||||||||| || |||    
T  28127791 tattcctgtattttctaccaactatgcctcttcttcattttgtttggacgaacttgtgcacatcattcactgctacaagacaaagggtcgcctagttttg 28127692  T
Q  220 cctgttttct 229  Q
    ||||||||||    
T  28127691 cctgttttct 28127682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 110; Significance: 1e-55; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 16 - 229
Target Start/End: Complemental strand, 29273999 - 29273786
Alignment:
Q  16 cttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaa 115  Q
    |||| ||||||||||||||| ||||||||||||||   ||| ||||||||||| |||||||||| | ||||||||  ||| | ||||||||| |||||||    
T  29273999 cttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgtcattgaagagtctagaa 29273900  T
Q  116 tttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 215  Q
    |||||||||||||||||||||||||||||||||||||   |||||| |||||||||||||| ||||| ||||| ||||| |||||||||||||| ||| |    
T  29273899 tttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagggtcgtctcat 29273800  T
Q  216 cttgcctgttttct 229  Q
     |||||||| ||||    
T  29273799 tttgcctgtcttct 29273786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 31903818 - 31903882
Alignment:
Q  25 aagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 89  Q
    ||||||||||| ||||| ||||| ||  | || |||||||||||| |||||||||||||||||||    
T  31903818 aagggaatccacacctttattgacgatgaagaacttcaaagaggacatgaaatcacaccatcact 31903882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 110; Significance: 1e-55; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 16 - 229
Target Start/End: Complemental strand, 18699616 - 18699403
Alignment:
Q  16 cttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaa 115  Q
    |||| ||||||||||||||| |||||||||||||||  ||| || ||||| || |||||||||| ||||||||||  ||| ||||||||||| ||||| |    
T  18699616 cttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagtggggatgaaatcaaaccatcactcgacaatgccattgaagagtctagga 18699517  T
Q  116 tttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 215  Q
    | || ||||||||||||||||||||||||||||||||   |||||| |||||||||||||||||||| ||||| ||||| |||||||| ||||| |||||    
T  18699516 tcttcattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgttcacatcattcactgctacaagacaaaaggtcgtctcgt 18699417  T
Q  216 cttgcctgttttct 229  Q
     |||||||||||||    
T  18699416 tttgcctgttttct 18699403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 16 - 229
Target Start/End: Complemental strand, 18679783 - 18679570
Alignment:
Q  16 cttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaa 115  Q
    |||| |||||| |||||||| |||||||||||||||  ||| || |||||||| |||||||||| ||||||||||  ||| ||||||||||| ||||| |    
T  18679783 cttactgacaaaggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattgaagagtctagga 18679684  T
Q  116 tttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 215  Q
    | || ||||||||||||||||||||||||||||||||   |||||| |||||||||||||| ||||| ||||| ||||| |||||||||||||| || ||    
T  18679683 tcttcattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagggtcgtcttgt 18679584  T
Q  216 cttgcctgttttct 229  Q
     |||||||||||||    
T  18679583 tttgcctgttttct 18679570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 16 - 229
Target Start/End: Complemental strand, 18731720 - 18731507
Alignment:
Q  16 cttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaa 115  Q
    |||| ||||||||||||||| |||||||||||||||  ||| || |||||||| |||||||||| ||||||||||  ||| ||||||||||| ||||| |    
T  18731720 cttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattgaagagtctagga 18731621  T
Q  116 tttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 215  Q
    | || ||||||||||||||||||||||||||||||||   |||||| |||||||||||||| ||||| || || ||||| |||||||||||||| || ||    
T  18731620 tcttcattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgt 18731521  T
Q  216 cttgcctgttttct 229  Q
     |||||||||||||    
T  18731520 tttgcctgttttct 18731507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 16 - 229
Target Start/End: Complemental strand, 18655693 - 18655480
Alignment:
Q  16 cttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaa 115  Q
    |||| ||||||||||||||| |||||||||||||||  ||| || ||||| || |||||||||| ||||||||||  ||| |||||| |||| ||||| |    
T  18655693 cttactgacaagggaatccacaccttcattgatgaccgtgagctgcaaagtggggatgaaatcaaaccatcactcgacaatgccattcaagagtctagga 18655594  T
Q  116 tttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 215  Q
    | |||||||||||||||||||||||||||||||||||   |||||| |||||||||||||| | ||| ||||| ||||| |||||||||||||| |||||    
T  18655593 tctttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccgcatcattcactgctacaagacaaagggtcgtctcgt 18655494  T
Q  216 cttgcctgttttct 229  Q
     || ||||||||||    
T  18655493 ttttcctgttttct 18655480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 16 - 229
Target Start/End: Complemental strand, 18724301 - 18724088
Alignment:
Q  16 cttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaa 115  Q
    |||| ||||||||||||||| |||||||||||||||  ||| || |||||||| |||||||||| ||||||||||  ||| ||||||||||| ||||| |    
T  18724301 cttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattgaagagtctagga 18724202  T
Q  116 tttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 215  Q
    | || ||||||||||||||||||||||||||||||||   |||||| ||| |||||||||| ||||| || || ||||| |||||||||||||| || ||    
T  18724201 tcttcattcctgtgttttctatcaactatgcctcttcttcattttgtttgaacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgt 18724102  T
Q  216 cttgcctgttttct 229  Q
     |||||||||||||    
T  18724101 tttgcctgttttct 18724088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 229
Target Start/End: Original strand, 18073804 - 18073933
Alignment:
Q  100 attgaagaatctagaatttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataaga 199  Q
    ||||||||||| || ||||| |||||  | ||||||  ||||||||| |||||   || ||| ||||||  |||||| ||||| ||||| ||||| || |    
T  18073804 attgaagaatccaggattttgattcccatattttctgccaactatgcatcttcttcatcttgtttggacacacttgtccacatcattcactgctacaaaa 18073903  T
Q  200 caaagggtcgcctcgtcttgcctgttttct 229  Q
    | |||||| ||||||| |||||||||||||    
T  18073904 ccaagggttgcctcgttttgcctgttttct 18073933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 112
Target Start/End: Complemental strand, 5091175 - 5091087
Alignment:
Q  24 caagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatcta 112  Q
    ||||||||| || ||||||||||||||||  || |||||  |||||||  |||| ||||| |||||  ||||||||||| |||||||||    
T  5091175 caagggaattcacaccttcattgatgacagagagcttcagcgaggagaccaaataacaccgtcacttctcaaggccattcaagaatcta 5091087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 87; Significance: 8e-42; HSPs: 4)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 23 - 193
Target Start/End: Original strand, 34690 - 34860
Alignment:
Q  23 acaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttat 122  Q
    ||||||||||||| ||||||||||||||||  || |||||| ||||||||||||| |||||||||||  |||||||||||||||| ||||| ||||| ||    
T  34690 acaagggaatccacaccttcattgatgacagggagcttcaaggaggagatgaaataacaccatcacttttcaaggccattgaagagtctaggattttcat 34789  T
Q  123 tcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgct 193  Q
    |||||| || |||||||| ||||| |||||   ||||||||||||||||||||| ||||| ||||| ||||    
T  34790 tcctgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcactgct 34860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 25 - 193
Target Start/End: Original strand, 27415 - 27583
Alignment:
Q  25 aagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattc 124  Q
    |||||||| || || ||| ||||||| |  || |||||| |||| |||||||| ||| |||||||  |||||| ||||||||||||||| ||||| ||||    
T  27415 aagggaattcacacattctttgatgatagagagcttcaaggaggtgatgaaataacatcatcacttttcaaggtcattgaagaatctaggattttcattc 27514  T
Q  125 ctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgct 193  Q
    |||| || |||||||| ||||| |||||   ||||||||||||||||||||| ||||| ||||||||||    
T  27515 ctgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcattgct 27583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 36 - 193
Target Start/End: Original strand, 116774 - 116931
Alignment:
Q  36 taccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttct 135  Q
    |||||||||||||||||| || |||||| |||| || ||||| ||||| |||||  |||||||||||||||| ||||| ||||| |||||| | || |||    
T  116774 taccttcattgatgacaaagaccttcaacgaggtgacgaaataacaccgtcacttttcaaggccattgaagagtctaggattttcattcctattttgtct 116873  T
Q  136 atcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgct 193  Q
    ||||| ||||| |||||    ||||||||||| |||||||| ||||||||||| ||||    
T  116874 atcaattatgcttcttcttccttttgcttggatgaacttgtccacattattcactgct 116931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 37 - 193
Target Start/End: Original strand, 42945 - 43101
Alignment:
Q  37 accttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttcta 136  Q
    ||||||||||||||||  || |||| | |||| ||  |||| |||||||||||  |||||||||||||||| ||||| ||||| |||||||| || ||||    
T  42945 accttcattgatgacagagaacttccaggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtcta 43044  T
Q  137 tcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgct 193  Q
    |||| ||||| |||||   ||||||||||||||||||||| ||||| ||||| ||||    
T  43045 tcaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcactgct 43101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 193
Target Start/End: Complemental strand, 58506 - 58334
Alignment:
Q  21 tgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaattttt 120  Q
    ||||||||||||||  |||||||| |||||||  || |||||| |||| || ||||| |||||||||||  ||||||||||| |||| ||||| |||||     
T  58506 tgacaagggaatccgaaccttcatggatgacagagagcttcaaggaggtgacgaaataacaccatcacttttcaaggccattaaagagtctaggattttc 58407  T
Q  121 attcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgct 193  Q
    ||||| || || |||||||||||||| |||||   |||||||||| |||||||||| ||||| ||||| ||||    
T  58406 attcccgtcttgtctatcaactatgcttcttcttcattttgcttgaacgaacttgtccacatcattcactgct 58334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 37 - 193
Target Start/End: Original strand, 3279667 - 3279823
Alignment:
Q  37 accttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttcta 136  Q
    |||||||||||||| |  || |||||  |||| ||||||||||||| ||||||  |||||||||| ||||| || |  ||||||||||| || || ||||    
T  3279667 accttcattgatgatagggagcttcatggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctcta 3279766  T
Q  137 tcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgct 193  Q
    |||||||||| ||||| | |||||| |||||||||||||| ||||| ||||||||||    
T  3279767 tcaactatgcttcttctatattttgtttggacgaacttgtccacatcattcattgct 3279823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 117
Target Start/End: Complemental strand, 17993908 - 17993812
Alignment:
Q  21 tgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatt 117  Q
    |||||||||||| |  |||||||| |||||||| || ||||| ||||| |||||||||||||| || ||| |||||  ||||||||| || ||||||    
T  17993908 tgacaagggaattcgaaccttcatcgatgacaaagagcttcagagaggtgatgaaatcacaccgtcgctcctcaagagcattgaagactcaagaatt 17993812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 107
Target Start/End: Original strand, 16688974 - 16689060
Alignment:
Q  21 tgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaaga 107  Q
    |||||||||||||| |  ||||||||||||||| || ||||| ||||| ||  |||||||||||||||| |||||||| ||||||||    
T  16688974 tgacaagggaatccgtgtcttcattgatgacaaggaacttcagagaggtgacaaaatcacaccatcacttatcaaggcaattgaaga 16689060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 229
Target Start/End: Original strand, 59612 - 59741
Alignment:
Q  100 attgaagaatctagaatttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataaga 199  Q
    ||||||||||| || ||||| |||||  | ||||||  ||||||||| |||||   || ||| ||||||  |||||| ||||| ||||| ||||| || |    
T  59612 attgaagaatccaggattttgattcccatattttctgccaactatgcatcttcttcatcttgtttggacacacttgtccacatcattcactgctacaaaa 59711  T
Q  200 caaagggtcgcctcgtcttgcctgttttct 229  Q
    | |||||| ||||||| |||||||||||||    
T  59712 ccaagggttgcctcgttttgcctgttttct 59741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University