View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2098_low_31 (Length: 236)
Name: NF2098_low_31
Description: NF2098
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2098_low_31 |
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Alignment Details
Target: chr2 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 6 - 221
Target Start/End: Complemental strand, 32192870 - 32192651
Alignment:
| Q |
6 |
aaaataaattggaagaaattccttttcttcttggtggtcggaactacgaaagaaactaaacatgttaaaatcaaccataccatcgagaatcatgtttgtc |
105 |
Q |
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| T |
32192870 |
aaaataaattggaagaaattccttttcttcttggtggtcggaactacgaaagaaactaaacatgttaaaatcaaccataccatcgagaatcatgtttgtc |
32192771 |
T |
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| Q |
106 |
tcttcaaagattggaagcaggaatgcactatacaaaaatataactgacctaaaacaagaaagagcacttttatttttacatgatgttcaaagtgtggcca |
205 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
32192770 |
tcttcaaagattggaaccaggaatgcactatacaaaaatataactgacctaaaacaagaaagagcacttttatttttacatgatgttaaaagtgtggcca |
32192671 |
T |
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| Q |
206 |
----gttgtacccaaaaaat |
221 |
Q |
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|||||||||||||||| |
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| T |
32192670 |
atatgttgtacccaaaaaat |
32192651 |
T |
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