View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2098_low_34 (Length: 234)
Name: NF2098_low_34
Description: NF2098
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2098_low_34 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 23 - 234
Target Start/End: Original strand, 8018541 - 8018752
Alignment:
| Q |
23 |
ggatatgtttttattttggaagttcaatagaggtgttactcctaccagtttggtttatttatcacactcatgcatttaattcaagagaagaggtaggagt |
122 |
Q |
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| T |
8018541 |
ggatatgtttttattttggaagttcaatagaggtgttactcctaccagtttggtttatttatcacactcatgcatttaattcaagagaagaggtaggagt |
8018640 |
T |
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| Q |
123 |
annnnnnnnggttaatattaacctattttaagtatggtgaaatatattttatacaaaccttgtttatcacttcccattaatatattgttgtttgtttttg |
222 |
Q |
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| T |
8018641 |
attttttttggttaatattaacctattttaagtatggtgaaatatattttatacaaaccttgtttatcacttcccattaatatattgttgtttgtttttg |
8018740 |
T |
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| Q |
223 |
ttgaaagaatga |
234 |
Q |
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| T |
8018741 |
ttgaaagaatga |
8018752 |
T |
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