View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2098_low_5 (Length: 427)
Name: NF2098_low_5
Description: NF2098
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2098_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 386; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 386; E-Value: 0
Query Start/End: Original strand, 1 - 414
Target Start/End: Original strand, 21881018 - 21881431
Alignment:
| Q |
1 |
attattacaggcgtctatatgtcaatgttgagtctttttcacatatgtgtcaatacttcatatgttctccaaaagtacctaaggaattagtttctcgatt |
100 |
Q |
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||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
21881018 |
attattataggtgtctatatgtcagtgttgagtctttttcacatatgtgtcaatacttcatatcttctccaaaagtacctaaggaattagtttctcgatt |
21881117 |
T |
|
| Q |
101 |
ttttagatgctctctcattaggttccacataaacataaaccgtaaatgaaaaacgaaagatctcataaactaaaagctaatcaaaattaggccaaaatta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
21881118 |
ttttagatgctctctcattaggttccacataaacataaaccgtaaatgaagaacgaaagatctcataaactaaaagctaaccaaaattaggccaaaatta |
21881217 |
T |
|
| Q |
201 |
acaaagttttatatactttttgtaggtgtatatttatagtttatgcataagtactaattcttagggttaacataacaggaaaagtctgagaagggctcct |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21881218 |
acaaagttttatatactttttgtaggtgtatatttatagtttatgcacaagtactaattcttagggttaacataacaggaaaagtctgagaagggctcct |
21881317 |
T |
|
| Q |
301 |
tcagtagcaatagctccgacgaagatagaaaaggtcctgaaagagcatacttttattgggtaacaagggaacaagcttcatttgaatggttcaaaggtgt |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21881318 |
tcagtagcaatagctccgacgaagatagaaaaggtcctgaaagagcatacttttattgggtaacaagggaacaagcttcatttgaatggttcaaaggtgt |
21881417 |
T |
|
| Q |
401 |
tatggatgatattg |
414 |
Q |
| |
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|||||||||||||| |
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| T |
21881418 |
tatggatgatattg |
21881431 |
T |
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