View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20990_high_4 (Length: 353)
Name: NF20990_high_4
Description: NF20990
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20990_high_4 |
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Alignment Details
Target: chr6 (Bit Score: 299; Significance: 1e-168; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 23 - 345
Target Start/End: Original strand, 15114353 - 15114675
Alignment:
| Q |
23 |
atcatcaaaacattatctttctccgtctttttactcaccaaaagattcaaaatctcatgtaaaaccccaacaacccacttatccgattcctcactcgaac |
122 |
Q |
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| T |
15114353 |
atcatcaaaacattatctttctccgtctttttactcaccaaaagattcaaaatctcatgtaaaaccccaacaacccacttatccgattcctcactcgaac |
15114452 |
T |
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| Q |
123 |
cactcaaattcacaccattctcatacggactcacatacctcaaaccattccactccttcacccatttctcatacttcttatccatctcaaaacccgtcga |
222 |
Q |
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| T |
15114453 |
cactcaaattcaccccattctcatacggactcacatacctcaaaccattccactccttcacccatttctcatacttcttatccatctcaaaacccgtcga |
15114552 |
T |
|
| Q |
223 |
aaattgcaccggaaaacccaattccttcccttgccctttcgctttatcgccatatttcttctccaaaaacgacaccgcgtgttgtttactccaacaaacc |
322 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||| |
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| T |
15114553 |
aaattgcaccggaaaacccaattccttcccttgccctttcgctttatcgccatatttcttctccaaaaacgacacagagtgttttttactccaacaaacc |
15114652 |
T |
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| Q |
323 |
aattccaaaacagcagtattatc |
345 |
Q |
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| T |
15114653 |
agttccaaaacagcattattatc |
15114675 |
T |
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