View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20991_low_1 (Length: 512)

Name: NF20991_low_1
Description: NF20991
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20991_low_1
NF20991_low_1
[»] chr4 (71 HSPs)
chr4 (1-501)||(752841-753341)
chr4 (324-501)||(715515-715692)
chr4 (374-471)||(23292926-23293021)
chr4 (304-468)||(28084475-28084640)
chr4 (374-471)||(28964188-28964283)
chr4 (300-470)||(3947702-3947874)
chr4 (342-474)||(49431018-49431148)
chr4 (413-473)||(29205529-29205589)
chr4 (381-471)||(16073425-16073513)
chr4 (412-471)||(3064868-3064927)
chr4 (324-471)||(19482643-19482798)
chr4 (374-471)||(35157925-35158020)
chr4 (376-472)||(21945529-21945623)
chr4 (385-472)||(34306743-34306828)
chr4 (374-471)||(8423658-8423753)
chr4 (374-467)||(12797282-12797373)
chr4 (413-470)||(30982808-30982865)
chr4 (374-473)||(42640553-42640645)
chr4 (374-469)||(4157173-4157266)
chr4 (374-469)||(4157460-4157553)
chr4 (374-441)||(29205468-29205533)
chr4 (413-473)||(36635391-36635451)
chr4 (423-478)||(24343584-24343639)
chr4 (413-471)||(5414101-5414159)
chr4 (374-471)||(11596297-11596387)
chr4 (386-471)||(12895214-12895297)
chr4 (423-469)||(22440559-22440605)
chr4 (425-471)||(53381530-53381576)
chr4 (434-471)||(5775304-5775341)
chr4 (413-470)||(14465006-14465063)
chr4 (300-365)||(28720827-28720892)
chr4 (424-473)||(37203324-37203373)
chr4 (60-141)||(48575478-48575559)
chr4 (342-473)||(2361913-2362041)
chr4 (423-471)||(16184902-16184950)
chr4 (423-471)||(18513175-18513223)
chr4 (435-470)||(4383449-4383484)
chr4 (423-470)||(17425348-17425395)
chr4 (428-471)||(40784029-40784072)
chr4 (437-475)||(10499223-10499261)
chr4 (413-471)||(24613630-24613688)
chr4 (434-472)||(28470447-28470485)
chr4 (413-471)||(35161097-35161155)
chr4 (415-473)||(47264060-47264118)
chr4 (374-471)||(12895055-12895151)
chr4 (434-471)||(30299011-30299048)
chr4 (434-471)||(30327879-30327916)
chr4 (416-472)||(11931355-11931411)
chr4 (435-471)||(18844423-18844459)
chr4 (423-471)||(23386230-23386277)
chr4 (423-471)||(30094084-30094132)
chr4 (423-466)||(3712458-3712501)
chr4 (423-470)||(5922532-5922579)
chr4 (413-472)||(18966570-18966629)
chr4 (437-471)||(12708227-12708261)
chr4 (417-471)||(12884347-12884401)
chr4 (413-471)||(22234819-22234877)
chr4 (416-466)||(30838285-30838335)
chr4 (63-101)||(38740287-38740325)
chr4 (436-473)||(3144585-3144622)
chr4 (414-471)||(7214466-7214523)
chr4 (54-127)||(24364096-24364169)
chr4 (58-95)||(43868276-43868313)
chr4 (435-471)||(824216-824252)
chr4 (61-101)||(2052054-2052094)
chr4 (423-471)||(17876237-17876285)
chr4 (409-469)||(28000672-28000732)
chr4 (413-473)||(32273459-32273519)
chr4 (435-479)||(35239202-35239246)
chr4 (411-471)||(36409444-36409504)
chr4 (411-471)||(36423610-36423670)
[»] scaffold0793 (1 HSPs)
scaffold0793 (1-501)||(4791-5291)
[»] chr3 (65 HSPs)
chr3 (376-475)||(20503491-20503588)
chr3 (374-469)||(28918025-28918120)
chr3 (374-471)||(27505270-27505370)
chr3 (374-471)||(40993275-40993370)
chr3 (374-471)||(55401099-55401194)
chr3 (374-471)||(10954976-10955074)
chr3 (374-471)||(41961579-41961685)
chr3 (374-469)||(4987222-4987326)
chr3 (376-470)||(15999951-16000049)
chr3 (423-471)||(34185052-34185100)
chr3 (374-471)||(49651716-49651821)
chr3 (381-471)||(7171532-7171620)
chr3 (423-478)||(11610580-11610635)
chr3 (374-469)||(25775533-25775624)
chr3 (423-476)||(40052383-40052436)
chr3 (418-470)||(8789489-8789541)
chr3 (298-470)||(14216841-14217021)
chr3 (298-470)||(14222970-14223150)
chr3 (413-464)||(3631745-3631796)
chr3 (381-471)||(26492145-26492233)
chr3 (374-471)||(35222962-35223057)
chr3 (436-473)||(8842413-8842450)
chr3 (435-471)||(4990912-4990948)
chr3 (423-471)||(25074866-25074914)
chr3 (413-469)||(29508511-29508567)
chr3 (413-471)||(5440967-5441026)
chr3 (428-471)||(14979225-14979268)
chr3 (381-475)||(16789043-16789145)
chr3 (413-476)||(28812587-28812650)
chr3 (423-469)||(24204983-24205029)
chr3 (404-470)||(32804485-32804551)
chr3 (428-470)||(34910393-34910435)
chr3 (434-475)||(3730104-3730145)
chr3 (300-365)||(14223896-14223961)
chr3 (415-472)||(18427012-18427069)
chr3 (435-472)||(21861658-21861695)
chr3 (421-470)||(37077439-37077488)
chr3 (423-471)||(3163971-3164019)
chr3 (423-471)||(4466540-4466588)
chr3 (413-469)||(13806308-13806363)
chr3 (384-471)||(13845465-13845550)
chr3 (423-471)||(21211365-21211413)
chr3 (56-100)||(49158655-49158699)
chr3 (423-471)||(52369858-52369906)
chr3 (423-470)||(1389909-1389956)
chr3 (423-466)||(1509638-1509681)
chr3 (297-328)||(3164112-3164143)
chr3 (420-471)||(8039764-8039815)
chr3 (437-472)||(11252061-11252096)
chr3 (311-365)||(11665905-11665960)
chr3 (427-474)||(14829776-14829823)
chr3 (416-470)||(15864897-15864950)
chr3 (417-471)||(17276792-17276846)
chr3 (57-95)||(27481143-27481181)
chr3 (63-101)||(30958171-30958209)
chr3 (63-101)||(30973983-30974021)
chr3 (434-471)||(8903517-8903554)
chr3 (423-468)||(12100340-12100385)
chr3 (62-99)||(27825291-27825328)
chr3 (436-469)||(40150527-40150560)
chr3 (427-471)||(2408590-2408634)
chr3 (413-461)||(6525633-6525681)
chr3 (435-467)||(21256952-21256984)
chr3 (58-110)||(39657978-39658029)
chr3 (63-139)||(41115275-41115351)
[»] chr2 (68 HSPs)
chr2 (374-469)||(2438661-2438754)
chr2 (376-471)||(18840953-18841046)
chr2 (301-471)||(38117099-38117261)
chr2 (413-473)||(26769583-26769643)
chr2 (374-470)||(28596493-28596587)
chr2 (381-471)||(15972904-15972992)
chr2 (374-472)||(37559001-37559097)
chr2 (413-471)||(42511322-42511380)
chr2 (300-459)||(14996171-14996332)
chr2 (423-471)||(37419825-37419873)
chr2 (376-472)||(11223792-11223896)
chr2 (300-365)||(23717977-23718042)
chr2 (300-365)||(24105649-24105714)
chr2 (413-472)||(24009356-24009415)
chr2 (413-476)||(30717454-30717517)
chr2 (413-476)||(35056940-35057003)
chr2 (374-463)||(5040758-5040845)
chr2 (413-471)||(15907851-15907909)
chr2 (374-471)||(18622630-18622721)
chr2 (301-464)||(21624217-21624374)
chr2 (374-471)||(30404790-30404885)
chr2 (374-458)||(29176446-29176528)
chr2 (387-458)||(12224260-12224329)
chr2 (423-471)||(15909570-15909618)
chr2 (300-468)||(21091674-21091839)
chr2 (300-365)||(21374742-21374809)
chr2 (413-473)||(34784909-34784969)
chr2 (374-472)||(974771-974871)
chr2 (423-466)||(23058389-23058432)
chr2 (416-471)||(41843510-41843565)
chr2 (428-470)||(3444827-3444869)
chr2 (423-469)||(19942336-19942382)
chr2 (374-471)||(20242667-20242762)
chr2 (300-365)||(21782861-21782927)
chr2 (413-471)||(34993922-34993980)
chr2 (435-472)||(10535684-10535721)
chr2 (416-469)||(15657939-15657992)
chr2 (414-471)||(21782744-21782801)
chr2 (434-471)||(34221463-34221500)
chr2 (413-470)||(44860392-44860449)
chr2 (374-449)||(5367216-5367289)
chr2 (423-471)||(18631351-18631399)
chr2 (435-471)||(19536361-19536397)
chr2 (434-470)||(23354582-23354618)
chr2 (57-97)||(26627185-26627225)
chr2 (417-473)||(28412422-28412478)
chr2 (413-469)||(36756275-36756331)
chr2 (427-471)||(44635568-44635612)
chr2 (435-470)||(18255945-18255980)
chr2 (436-471)||(20539632-20539667)
chr2 (434-469)||(23354926-23354961)
chr2 (413-476)||(27084330-27084393)
chr2 (58-100)||(33502768-33502811)
chr2 (435-470)||(34691770-34691805)
chr2 (435-470)||(34714182-34714217)
chr2 (434-468)||(17776680-17776714)
chr2 (300-365)||(20539717-20539783)
chr2 (434-472)||(22084755-22084793)
chr2 (423-473)||(24975253-24975303)
chr2 (423-473)||(32749752-32749802)
chr2 (413-471)||(36096304-36096362)
chr2 (413-467)||(37411188-37411242)
chr2 (423-469)||(42832234-42832280)
chr2 (64-101)||(7630539-7630576)
chr2 (300-328)||(1886957-1886985)
chr2 (61-101)||(13238936-13238976)
chr2 (413-470)||(35449568-35449627)
chr2 (435-471)||(39323321-39323357)
[»] chr6 (65 HSPs)
chr6 (342-471)||(4877935-4878061)
chr6 (374-474)||(34595158-34595256)
chr6 (374-471)||(28152122-28152217)
chr6 (302-469)||(12696277-12696446)
chr6 (342-468)||(32978842-32978966)
chr6 (300-471)||(8365448-8365628)
chr6 (413-471)||(10339054-10339112)
chr6 (413-471)||(17327590-17327648)
chr6 (374-470)||(17841530-17841624)
chr6 (296-471)||(8776908-8777092)
chr6 (376-471)||(28715321-28715414)
chr6 (302-470)||(9658832-9658998)
chr6 (374-471)||(10770607-10770709)
chr6 (374-470)||(31384944-31385048)
chr6 (374-471)||(16766721-16766827)
chr6 (413-471)||(18367908-18367966)
chr6 (301-470)||(31959111-31959268)
chr6 (374-471)||(32511606-32511701)
chr6 (300-458)||(3398569-3398729)
chr6 (322-473)||(9107297-9107456)
chr6 (321-471)||(16833280-16833427)
chr6 (423-468)||(8389411-8389456)
chr6 (423-468)||(9025448-9025493)
chr6 (422-471)||(13360313-13360362)
chr6 (423-471)||(7248440-7248488)
chr6 (374-469)||(7265535-7265628)
chr6 (423-471)||(7938171-7938219)
chr6 (376-471)||(7977770-7977863)
chr6 (413-473)||(8714052-8714112)
chr6 (348-471)||(24645479-24645600)
chr6 (423-471)||(34894968-34895016)
chr6 (413-472)||(3209460-3209519)
chr6 (437-471)||(7723199-7723233)
chr6 (436-474)||(10842617-10842655)
chr6 (434-471)||(8805524-8805561)
chr6 (435-471)||(426478-426514)
chr6 (413-469)||(5000557-5000613)
chr6 (435-471)||(5732474-5732510)
chr6 (413-473)||(5970035-5970095)
chr6 (376-471)||(6898221-6898314)
chr6 (423-471)||(9629465-9629513)
chr6 (435-471)||(10649371-10649407)
chr6 (419-471)||(12868616-12868668)
chr6 (425-472)||(7378052-7378099)
chr6 (416-471)||(12236723-12236778)
chr6 (428-471)||(34446647-34446690)
chr6 (60-146)||(1499989-1500075)
chr6 (300-365)||(1681702-1681774)
chr6 (437-483)||(5569834-5569880)
chr6 (425-471)||(6389806-6389851)
chr6 (423-473)||(7625187-7625237)
chr6 (60-110)||(13428857-13428907)
chr6 (60-101)||(2915143-2915184)
chr6 (435-472)||(9911481-9911518)
chr6 (417-466)||(24138496-24138545)
chr6 (421-470)||(24807113-24807162)
chr6 (428-469)||(26178620-26178661)
chr6 (434-475)||(28648365-28648406)
chr6 (434-471)||(32839571-32839608)
chr6 (426-471)||(34073278-34073323)
chr6 (435-471)||(2117139-2117175)
chr6 (416-468)||(7996325-7996377)
chr6 (416-468)||(8022424-8022476)
chr6 (423-471)||(9027238-9027286)
chr6 (296-328)||(34225888-34225920)
[»] chr7 (59 HSPs)
chr7 (374-471)||(5409771-5409871)
chr7 (376-472)||(21880178-21880272)
chr7 (300-471)||(32093954-32094130)
chr7 (300-471)||(43027404-43027578)
chr7 (374-476)||(9778524-9778629)
chr7 (300-471)||(21864756-21864927)
chr7 (299-471)||(24105628-24105797)
chr7 (374-474)||(24339666-24339775)
chr7 (413-471)||(598269-598327)
chr7 (374-471)||(15680833-15680928)
chr7 (329-470)||(20549771-20549909)
chr7 (376-466)||(13770717-13770810)
chr7 (413-471)||(29763129-29763187)
chr7 (374-471)||(33994236-33994331)
chr7 (417-467)||(40287306-40287356)
chr7 (374-471)||(2334274-2334379)
chr7 (423-471)||(6490787-6490835)
chr7 (423-471)||(40131939-40131987)
chr7 (411-470)||(20545185-20545244)
chr7 (423-470)||(32287404-32287451)
chr7 (413-471)||(7438778-7438836)
chr7 (423-471)||(1433530-1433578)
chr7 (423-471)||(14729774-14729822)
chr7 (435-471)||(35862034-35862070)
chr7 (301-365)||(49107773-49107837)
chr7 (381-470)||(7197238-7197325)
chr7 (376-449)||(8234172-8234243)
chr7 (417-471)||(17852065-17852119)
chr7 (374-471)||(18212973-18213068)
chr7 (437-471)||(30813882-30813916)
chr7 (434-471)||(3991395-3991432)
chr7 (427-468)||(8842282-8842323)
chr7 (417-470)||(18035806-18035858)
chr7 (423-464)||(18215144-18215185)
chr7 (296-473)||(25481842-25482023)
chr7 (434-471)||(28973881-28973918)
chr7 (434-471)||(29812598-29812635)
chr7 (413-470)||(32308192-32308249)
chr7 (423-471)||(7133212-7133260)
chr7 (420-471)||(1401091-1401142)
chr7 (422-473)||(5307326-5307377)
chr7 (423-466)||(11722073-11722116)
chr7 (440-471)||(19213881-19213912)
chr7 (423-466)||(43250075-43250118)
chr7 (374-459)||(26733328-26733411)
chr7 (438-476)||(27945104-27945142)
chr7 (435-472)||(7328638-7328675)
chr7 (413-462)||(14077383-14077432)
chr7 (413-462)||(14387411-14387460)
chr7 (438-471)||(23128603-23128636)
chr7 (434-471)||(38134335-38134372)
chr7 (423-472)||(38804488-38804537)
chr7 (301-329)||(2334205-2334233)
chr7 (415-459)||(10043007-10043051)
chr7 (434-470)||(11272531-11272567)
chr7 (300-328)||(17851375-17851403)
chr7 (413-469)||(22868108-22868164)
chr7 (417-469)||(26033392-26033444)
chr7 (435-471)||(28155637-28155673)
[»] chr5 (62 HSPs)
chr5 (374-471)||(21576685-21576780)
chr5 (374-469)||(21190998-21191091)
chr5 (374-472)||(31084347-31084448)
chr5 (374-471)||(21194063-21194158)
chr5 (381-459)||(15382510-15382592)
chr5 (413-471)||(17123109-17123166)
chr5 (376-469)||(43001826-43001922)
chr5 (374-471)||(43564905-43565000)
chr5 (413-468)||(39268541-39268596)
chr5 (413-471)||(7677777-7677835)
chr5 (342-472)||(42893353-42893480)
chr5 (418-471)||(14873588-14873641)
chr5 (423-472)||(19820327-19820376)
chr5 (381-469)||(30502330-30502416)
chr5 (381-469)||(30542673-30542759)
chr5 (376-471)||(27932261-27932354)
chr5 (419-471)||(38464313-38464365)
chr5 (415-478)||(32766865-32766928)
chr5 (435-473)||(22423762-22423800)
chr5 (374-471)||(28588614-28588709)
chr5 (413-479)||(30098398-30098464)
chr5 (425-471)||(39698625-39698671)
chr5 (434-471)||(35017125-35017162)
chr5 (435-471)||(10298633-10298669)
chr5 (423-463)||(17088362-17088402)
chr5 (413-469)||(23015926-23015982)
chr5 (423-470)||(3966585-3966632)
chr5 (374-472)||(4105283-4105379)
chr5 (299-365)||(22013363-22013430)
chr5 (413-471)||(16304366-16304424)
chr5 (413-471)||(21522822-21522880)
chr5 (413-471)||(21533388-21533446)
chr5 (413-467)||(30183621-30183675)
chr5 (413-470)||(6401570-6401627)
chr5 (423-472)||(19552475-19552524)
chr5 (423-471)||(2419938-2419986)
chr5 (423-471)||(2436982-2437030)
chr5 (423-471)||(17593663-17593711)
chr5 (413-469)||(19579773-19579829)
chr5 (374-469)||(21351852-21351940)
chr5 (413-469)||(24238603-24238659)
chr5 (435-471)||(24906252-24906288)
chr5 (423-471)||(39695951-39695998)
chr5 (424-471)||(37328775-37328822)
chr5 (436-474)||(2548464-2548502)
chr5 (437-471)||(6770621-6770655)
chr5 (300-365)||(19820437-19820503)
chr5 (413-467)||(36642696-36642749)
chr5 (436-474)||(36838615-36838653)
chr5 (299-329)||(39205847-39205877)
chr5 (435-469)||(41995547-41995581)
chr5 (413-471)||(42029813-42029871)
chr5 (436-473)||(14674333-14674370)
chr5 (427-476)||(15884052-15884101)
chr5 (300-333)||(17593789-17593822)
chr5 (413-466)||(35904730-35904783)
chr5 (296-333)||(43554488-43554525)
chr5 (300-328)||(6401442-6401470)
chr5 (300-328)||(14674231-14674259)
chr5 (423-471)||(17393305-17393353)
chr5 (415-467)||(30098982-30099034)
chr5 (423-471)||(32444850-32444898)
[»] chr1 (72 HSPs)
chr1 (374-471)||(22515827-22515922)
chr1 (374-469)||(1486646-1486744)
chr1 (381-471)||(37598862-37598950)
chr1 (300-472)||(38078600-38078771)
chr1 (374-471)||(1815281-1815376)
chr1 (374-471)||(18337353-18337448)
chr1 (374-470)||(40258874-40258968)
chr1 (374-471)||(47989521-47989627)
chr1 (381-469)||(42359391-42359477)
chr1 (322-475)||(5944254-5944417)
chr1 (385-471)||(46348323-46348407)
chr1 (374-476)||(51410049-51410149)
chr1 (413-471)||(9828116-9828174)
chr1 (413-471)||(40917821-40917879)
chr1 (413-471)||(6427536-6427594)
chr1 (374-474)||(1704932-1705027)
chr1 (416-471)||(18556385-18556440)
chr1 (374-471)||(36878485-36878585)
chr1 (413-471)||(5898206-5898264)
chr1 (423-469)||(16297223-16297269)
chr1 (425-471)||(21365992-21366038)
chr1 (413-471)||(32461393-32461451)
chr1 (421-471)||(40747707-40747757)
chr1 (418-471)||(19562556-19562608)
chr1 (434-471)||(35702542-35702579)
chr1 (374-471)||(113323-113412)
chr1 (423-471)||(2218299-2218347)
chr1 (423-471)||(15765829-15765877)
chr1 (376-471)||(18190048-18190141)
chr1 (427-471)||(22881567-22881611)
chr1 (435-471)||(22947813-22947849)
chr1 (423-471)||(29144320-29144368)
chr1 (423-471)||(34741918-34741965)
chr1 (423-471)||(46940748-46940796)
chr1 (428-471)||(27965940-27965983)
chr1 (425-471)||(16812629-16812675)
chr1 (384-469)||(17778580-17778670)
chr1 (413-471)||(25934688-25934746)
chr1 (413-471)||(31694639-31694697)
chr1 (426-471)||(6574051-6574096)
chr1 (413-470)||(10577676-10577733)
chr1 (416-473)||(32899955-32900012)
chr1 (435-471)||(7918154-7918190)
chr1 (435-471)||(9630561-9630597)
chr1 (411-471)||(18471354-18471414)
chr1 (421-477)||(22794012-22794068)
chr1 (417-473)||(34712321-34712377)
chr1 (374-457)||(40181895-40181976)
chr1 (423-467)||(48040418-48040462)
chr1 (435-471)||(48450550-48450586)
chr1 (423-470)||(10233327-10233374)
chr1 (301-332)||(23653318-23653349)
chr1 (435-470)||(48415667-48415702)
chr1 (417-471)||(9690213-9690267)
chr1 (423-473)||(17831460-17831510)
chr1 (413-471)||(30173691-30173749)
chr1 (434-472)||(35919225-35919263)
chr1 (300-334)||(43112938-43112972)
chr1 (423-473)||(52903317-52903367)
chr1 (300-365)||(5376543-5376608)
chr1 (413-466)||(9629834-9629887)
chr1 (413-470)||(12919006-12919063)
chr1 (300-333)||(23439945-23439978)
chr1 (413-466)||(26830648-26830701)
chr1 (434-471)||(30359447-30359484)
chr1 (417-462)||(38503394-38503439)
chr1 (40-113)||(51363130-51363203)
chr1 (387-470)||(5927281-5927362)
chr1 (56-100)||(22548205-22548249)
chr1 (420-471)||(25361963-25362012)
chr1 (413-469)||(33202964-33203020)
chr1 (439-471)||(48547938-48547970)
[»] scaffold0053 (1 HSPs)
scaffold0053 (322-473)||(8771-8919)
[»] scaffold0652 (1 HSPs)
scaffold0652 (381-470)||(403-490)
[»] chr8 (68 HSPs)
chr8 (381-471)||(36450694-36450782)
chr8 (374-471)||(18407743-18407838)
chr8 (415-471)||(11803333-11803389)
chr8 (374-468)||(40332215-40332307)
chr8 (300-471)||(4298830-4298994)
chr8 (413-478)||(29510226-29510291)
chr8 (385-467)||(5813627-5813707)
chr8 (374-472)||(31557020-31557116)
chr8 (413-471)||(8343388-8343446)
chr8 (413-471)||(22652048-22652106)
chr8 (377-469)||(926730-926820)
chr8 (374-469)||(3025575-3025668)
chr8 (413-471)||(6065586-6065644)
chr8 (374-471)||(8342996-8343086)
chr8 (425-471)||(15816058-15816104)
chr8 (413-471)||(21465484-21465542)
chr8 (413-459)||(22943301-22943347)
chr8 (413-471)||(34450961-34451019)
chr8 (426-471)||(17751730-17751775)
chr8 (426-471)||(17760717-17760762)
chr8 (434-474)||(25566912-25566952)
chr8 (413-473)||(29447516-29447576)
chr8 (423-471)||(30067968-30068016)
chr8 (423-471)||(39820500-39820547)
chr8 (427-474)||(13436907-13436954)
chr8 (413-476)||(14134760-14134823)
chr8 (413-472)||(26902103-26902162)
chr8 (436-471)||(31514938-31514973)
chr8 (413-471)||(3951476-3951534)
chr8 (413-471)||(4673354-4673412)
chr8 (421-471)||(13397620-13397670)
chr8 (428-466)||(31109463-31109501)
chr8 (423-469)||(44067598-44067644)
chr8 (421-470)||(24205749-24205798)
chr8 (413-470)||(29447040-29447097)
chr8 (375-471)||(33405324-33405418)
chr8 (423-472)||(40064033-40064082)
chr8 (436-472)||(11927014-11927050)
chr8 (412-472)||(11944736-11944796)
chr8 (414-466)||(14639735-14639787)
chr8 (429-469)||(16987990-16988030)
chr8 (382-469)||(20679337-20679422)
chr8 (423-471)||(27213596-27213644)
chr8 (423-470)||(13009423-13009469)
chr8 (56-99)||(18355755-18355798)
chr8 (322-471)||(22197671-22197828)
chr8 (384-470)||(43737752-43737836)
chr8 (413-463)||(126295-126345)
chr8 (436-470)||(3658237-3658271)
chr8 (437-471)||(11833935-11833969)
chr8 (421-471)||(13403175-13403225)
chr8 (429-471)||(16641909-16641951)
chr8 (413-471)||(18964251-18964309)
chr8 (374-471)||(24858036-24858135)
chr8 (61-103)||(35550305-35550347)
chr8 (413-455)||(44462151-44462193)
chr8 (413-455)||(44469684-44469726)
chr8 (60-101)||(2031906-2031947)
chr8 (381-469)||(15023199-15023285)
chr8 (434-471)||(24413499-24413536)
chr8 (434-471)||(37283755-37283792)
chr8 (299-328)||(43737900-43737929)
chr8 (415-471)||(949205-949261)
chr8 (435-471)||(9383049-9383085)
chr8 (376-408)||(22596020-22596052)
chr8 (443-471)||(27067231-27067259)
chr8 (435-471)||(34127172-34127208)
chr8 (423-471)||(38487157-38487205)
[»] scaffold0003 (2 HSPs)
scaffold0003 (413-475)||(241666-241728)
scaffold0003 (423-471)||(236914-236962)
[»] scaffold0004 (2 HSPs)
scaffold0004 (413-470)||(92883-92940)
scaffold0004 (374-410)||(123652-123688)
[»] scaffold0380 (1 HSPs)
scaffold0380 (413-471)||(8662-8720)
[»] scaffold0136 (1 HSPs)
scaffold0136 (413-471)||(3778-3836)
[»] scaffold0512 (1 HSPs)
scaffold0512 (387-471)||(4976-5058)
[»] scaffold0450 (1 HSPs)
scaffold0450 (413-474)||(8561-8622)
[»] scaffold0361 (1 HSPs)
scaffold0361 (374-472)||(14554-14647)
[»] scaffold0050 (1 HSPs)
scaffold0050 (376-468)||(70304-70394)
[»] scaffold0171 (2 HSPs)
scaffold0171 (298-362)||(23369-23433)
scaffold0171 (322-401)||(23483-23562)
[»] scaffold0475 (1 HSPs)
scaffold0475 (428-471)||(3384-3427)
[»] scaffold0083 (1 HSPs)
scaffold0083 (376-474)||(45467-45563)
[»] scaffold0086 (1 HSPs)
scaffold0086 (413-471)||(3000-3058)
[»] scaffold0019 (1 HSPs)
scaffold0019 (413-471)||(71797-71855)
[»] scaffold0027 (1 HSPs)
scaffold0027 (436-471)||(46741-46776)
[»] scaffold0021 (1 HSPs)
scaffold0021 (413-471)||(2978-3036)
[»] scaffold0623 (1 HSPs)
scaffold0623 (413-470)||(5926-5983)
[»] scaffold0306 (1 HSPs)
scaffold0306 (300-469)||(13350-13523)
[»] scaffold0152 (1 HSPs)
scaffold0152 (300-469)||(21804-21977)
[»] scaffold0057 (1 HSPs)
scaffold0057 (435-471)||(24119-24155)
[»] scaffold0036 (1 HSPs)
scaffold0036 (413-469)||(9678-9734)
[»] scaffold0168 (1 HSPs)
scaffold0168 (436-471)||(21243-21278)
[»] scaffold0128 (1 HSPs)
scaffold0128 (423-470)||(32775-32822)
[»] scaffold0103 (1 HSPs)
scaffold0103 (423-470)||(51894-51941)
[»] scaffold0011 (1 HSPs)
scaffold0011 (422-473)||(17540-17591)
[»] scaffold0009 (1 HSPs)
scaffold0009 (425-464)||(188473-188512)
[»] scaffold0007 (1 HSPs)
scaffold0007 (435-478)||(225190-225233)
[»] scaffold0227 (1 HSPs)
scaffold0227 (428-473)||(15047-15092)
[»] scaffold0008 (1 HSPs)
scaffold0008 (436-469)||(263303-263336)
[»] scaffold0020 (1 HSPs)
scaffold0020 (423-471)||(135263-135311)


Alignment Details
Target: chr4 (Bit Score: 445; Significance: 0; HSPs: 71)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 445; E-Value: 0
Query Start/End: Original strand, 1 - 501
Target Start/End: Complemental strand, 753341 - 752841
Alignment:
Q  1 cgctcttttgctttctctgatcctatcataatttagtgcatgtttggttcacggatgataaaaattgattttgaatgaatctattttgtaaaattgattt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  753341 cgctcttttgctttctctgatcctatcataatttagtgcatgtttggttcacggatgataaaaattgattttgaatgaatctattttgtaaaattgattt 753242  T
Q  101 ttacttaaaatgacccgaatgtaaaatgatttatgtttgaacacatctacctaaagttaacaataaatttcgtgttaacaataaatgtactgtnnnnnnn 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||           
T  753241 ttacttaaaatgacccgaatgtaaaatgatttatgtttgaacacatttacctaaagttaacaataaatttcgtgttaacaataaatgtactgtaaaaaaa 753142  T
Q  201 ncaataaattttagggtaaaaatcaagtttagactcaatgattacaaattctatattcaagttaaaatcaactatggaggcaaaattaattattaatatc 300  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  753141 acaataaattttagggtaaaaatcaagtttagactcaatgattacaaattctatattcaagttaaaatcaactatggaggcaaaattaattattaatatc 753042  T
Q  301 tatgaagcacggatacagacacggacacgacacatactctaacacaccgacacagctaataatttnnnnnnnntcacattattcagtgtaattacaagtg 400  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||| ||||||||||||||||||||    
T  753041 tatgaagcacggatacagacacggacacgacacatactctaacacaccgacacagctaataatttaaaaaaaatcacataattcagtgtaattacaagtg 752942  T
Q  401 ttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagattattatgagtattagaaaagtttgatg 500  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  752941 ttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagattattatgagtattagaaaagtttgatg 752842  T
Q  501 a 501  Q
    |    
T  752841 a 752841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 324 - 501
Target Start/End: Complemental strand, 715692 - 715515
Alignment:
Q  324 gacacgacacatactctaacacaccgacacagctaataatttnnnnnnnntcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacat 423  Q
    ||||||||||||||||||||||||||||||||||||||||||        |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  715692 gacacgacacatactctaacacaccgacacagctaataatttaaaaaaaatcacataattcagtgtaattacaagtgttggtgtcttgtacacgacacat 715593  T
Q  424 gtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagattattatgagtattagaaaagtttgatga 501  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  715592 gtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagattattatgagtattagaaaagtttgatga 715515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 374 - 471
Target Start/End: Complemental strand, 23293021 - 23292926
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||| ||||||| ||||||||||||| ||||||  | ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  23293021 tcacataattcagtataattacaagtgtcggtgtc--ggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 23292926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 304 - 468
Target Start/End: Original strand, 28084475 - 28084640
Alignment:
Q  304 gaagcacggatacagacac-ggacacgacacatactctaacacaccgacacagctaataatttnnnnnnnntcacattattcagtgtaattacaagtgtt 402  Q
    ||||||| ||||| ||||| |||||||||||| || || |||| ||||||||||||| |||||        |||||| ||||| |||||||||||||||     
T  28084475 gaagcacagatacggacaccggacacgacacagacgctgacacgccgacacagctaagaatttgaaaaaaatcacataattcaatgtaattacaagtgtc 28084574  T
Q  403 ggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttca 468  Q
     ||||| |||    ||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  28084575 tgtgtcgtgtcggtgacacgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttca 28084640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 374 - 471
Target Start/End: Complemental strand, 28964283 - 28964188
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||| |||||||||||||||||||||  |||||  | ||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||    
T  28964283 tcacataattcagtgtaattacaagtgtctgtgtc--ggacacgacacatatccgacactgggacacgcctaatccgaggagtgtccatgcttcatag 28964188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 300 - 470
Target Start/End: Complemental strand, 3947874 - 3947702
Alignment:
Q  300 ctatgaagcacggatacagacacggacacgacacatactctaacacaccgacacagctaataatttnnnnnnnntcacattattcagtgtaattacaagt 399  Q
    ||||||||| | ||||| ||||||||||| ||||| || |  |||  |||||||||||||||||||        || ||| |||||||||||||||||||    
T  3947874 ctatgaagctcagatacggacacggacaccacacagacacggacatgccgacacagctaataatttgaaaaaa-tcgcataattcagtgtaattacaagt 3947776  T
Q  400 gttggtgtcttgt---acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 470  Q
    ||  ||||| |||   ||||||||| ||||||||||  |||||| |||||||||||||||||||||||||||||    
T  3947775 gtcagtgtcgtgtcggacacgacacgtgtccgacaccaggacacacctaatccgaggagtgtccgtgcttcata 3947702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 342 - 474
Target Start/End: Original strand, 49431018 - 49431148
Alignment:
Q  342 acacaccgacacagctaataatttnnnnnnnntcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacg 441  Q
    |||| |||||||||||||||||||        |||||| |||||||||||||| |||||| ||||||  | ||||||||| ||||| |||| ||||||||    
T  49431018 acacgccgacacagctaataatttgaaaaaaatcacataattcagtgtaattaaaagtgtcggtgtc--ggacacgacacgtgtccaacaccgggacacg 49431115  T
Q  442 cctaatccgaggagtgtccgtgcttcatagatt 474  Q
    ||| ||||||||||||||| ||||| |||||||    
T  49431116 ccttatccgaggagtgtccatgctttatagatt 49431148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 413 - 473
Target Start/End: Original strand, 29205529 - 29205589
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagat 473  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  29205529 acacgacacatgtccgacactgggacacgcctaatccgaggagtgttcgtgcttcatagat 29205589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 381 - 471
Target Start/End: Original strand, 16073425 - 16073513
Alignment:
Q  381 attcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||||||||||||||| ||||||  | |||||| |||||||||||||   ||||||||||||||||||||||||| ||||||||||    
T  16073425 attcagtgtaattacaagtgtcggtgtc--ggacacgatacatgtccgacactaagacacgcctaatccgaggagtgtccatgcttcatag 16073513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 412 - 471
Target Start/End: Complemental strand, 3064927 - 3064868
Alignment:
Q  412 tacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||    
T  3064927 tacacgacacatgtccgactctgagacacgcctaatccgaggagtgtccgtgcttcatag 3064868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 324 - 471
Target Start/End: Original strand, 19482643 - 19482798
Alignment:
Q  324 gacacgacacatactctaacacaccgacacagctaataatttnnnnnnnntcacattattcagtgtaattacaagtgttggtgtcttgt---------ac 414  Q
    ||||||||||| || || |||| |||||||| ||||||||||        |||||| |||| ||||||||||||||||||||||| |||         ||    
T  19482643 gacacgacacagacactgacacgccgacacaactaataatttgaaaata-tcacataattcggtgtaattacaagtgttggtgtcgtgtcggtattggac 19482741  T
Q  415 acgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||| |||||||||| ||||||| ||||||||||||||||| ||||||||||||    
T  19482742 acgacacgtgtccgacactgggacacacctaatccgaggagtgttcgtgcttcatag 19482798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 374 - 471
Target Start/End: Complemental strand, 35158020 - 35157925
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||| ||| |||||||||| |||||| |||||||   ||||||||||||||| |||| || |||||| ||||||||| ||||||||||||||||||    
T  35158020 tcacataatttagtgtaattataagtgtcggtgtctg--acacgacacatgtccaacaccggaacacgcttaatccgagaagtgtccgtgcttcatag 35157925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 376 - 472
Target Start/End: Original strand, 21945529 - 21945623
Alignment:
Q  376 acattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcataga 472  Q
    |||| ||||||||||||||||||||| ||||||  | ||| |||||||||||||||| |  |||||||||||||||||||||||  |||||| ||||    
T  21945529 acataattcagtgtaattacaagtgtcggtgtc--ggacatgacacatgtccgacaccgcaacacgcctaatccgaggagtgtctatgcttcttaga 21945623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 385 - 472
Target Start/End: Complemental strand, 34306828 - 34306743
Alignment:
Q  385 agtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcataga 472  Q
    ||||||||||||||||| ||||||  | ||||||||| |||||||||| | ||||||||||||| ||||| ||| |||||||||||||    
T  34306828 agtgtaattacaagtgtcggtgtc--ggacacgacacgtgtccgacaccgagacacgcctaatctgaggaatgttcgtgcttcataga 34306743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 374 - 471
Target Start/End: Complemental strand, 8423753 - 8423658
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||| |||||||||||||| || ||| ||||||  | ||||||||  |||||||||| ||||||||||||||| ||| ||||||||||| ||||||    
T  8423753 tcacataattcagtgtaattataaatgtcggtgtc--ggacacgacagctgtccgacaccgggacacgcctaatcggagaagtgtccgtgcgtcatag 8423658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 374 - 467
Target Start/End: Complemental strand, 12797373 - 12797282
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttc 467  Q
    |||||| ||||||||||||||||||||| ||||||  | |||||| ||||||| ||||| |||||| | |||||||||||| ||| ||||||||    
T  12797373 tcacataattcagtgtaattacaagtgtcggtgtc--ggacacgatacatgtctgacaccgggacaagtctaatccgaggaatgttcgtgcttc 12797282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 413 - 470
Target Start/End: Complemental strand, 30982865 - 30982808
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 470  Q
    ||||||||| |||||||||| |||||||||||||||| | ||||||||||||||||||    
T  30982865 acacgacacgtgtccgacaccgggacacgcctaatccaaagagtgtccgtgcttcata 30982808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 374 - 473
Target Start/End: Original strand, 42640553 - 42640645
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagat 473  Q
    |||||| ||||||||||||||||||||| ||||||        ||||| |||||| |||  |||||||||||||||||||||| ||||||||||||||||    
T  42640553 tcacataattcagtgtaattacaagtgtcggtgtcg-------gacacgtgtccggcaccaggacacgcctaatccgaggagtttccgtgcttcatagat 42640645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 374 - 469
Target Start/End: Original strand, 4157173 - 4157266
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 469  Q
    |||||| ||| |||| |||||||||||| ||||||  | |||||||||||||||||||| | || || |||||| ||||||||||| |||||||||    
T  4157173 tcacataatttagtgcaattacaagtgtcggtgtc--ggacacgacacatgtccgacaccgagaaacacctaattcgaggagtgtctgtgcttcat 4157266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 374 - 469
Target Start/End: Original strand, 4157460 - 4157553
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 469  Q
    |||||| ||| |||| |||||||||||| ||||||  | |||||||||||||||||||| | || ||||||||| |||||||||||  ||||||||    
T  4157460 tcacataatttagtgcaattacaagtgtcggtgtc--ggacacgacacatgtccgacaccgagaaacgcctaattcgaggagtgtctatgcttcat 4157553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 374 - 441
Target Start/End: Original strand, 29205468 - 29205533
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacg 441  Q
    |||||| ||||||||||||||||||||| ||||  ||| |||||||||||||||||||| ||||||||    
T  29205468 tcacataattcagtgtaattacaagtgtcggtg--ttggacacgacacatgtccgacaccgggacacg 29205533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 413 - 473
Target Start/End: Original strand, 36635391 - 36635451
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagat 473  Q
    |||||||||  ||| ||||| |||||||||||||||||| |||||||||||||||||||||    
T  36635391 acacgacacgcgtcagacaccgggacacgcctaatccgaagagtgtccgtgcttcatagat 36635451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 423 - 478
Target Start/End: Original strand, 24343584 - 24343639
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagattatta 478  Q
    |||||||||| |||||||||||| || |||||||||||||||||||||||| ||||    
T  24343584 tgtccgacaccgggacacgcctattctgaggagtgtccgtgcttcatagatcatta 24343639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 413 - 471
Target Start/End: Complemental strand, 5414159 - 5414101
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||| |||| ||||||||||||| ||| |||| |||||||||||||||||||||    
T  5414159 acacgacacgtgtctgacacagggacacaccttatccaaggagtgtccgtgcttcatag 5414101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 374 - 471
Target Start/End: Complemental strand, 11596387 - 11596297
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||| ||||||||||||||||||||| |||||| |||      ||  |||||||||  ||||||||||||||| ||||||||||||||||||||||    
T  11596387 tcacataattcagtgtaattacaagtgtaggtgtcgtgt------cat-tgtccgacatcgggacacgcctaatctgaggagtgtccgtgcttcatag 11596297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 386 - 471
Target Start/End: Complemental strand, 12895297 - 12895214
Alignment:
Q  386 gtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||| |||||| ||||||  | ||||||||  | |||||||  ||||||||||||||||||||||||| ||||||||||||    
T  12895297 gtgtaattataagtgtcggtgtc--ggacacgacatgtatccgacatcgggacacgcctaatccgaggagtgttcgtgcttcatag 12895214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 423 - 469
Target Start/End: Complemental strand, 22440605 - 22440559
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 469  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||    
T  22440605 tgtccgacactaggacacgcctaatccgaggagtgtccgtgcttcat 22440559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 425 - 471
Target Start/End: Complemental strand, 53381576 - 53381530
Alignment:
Q  425 tccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||    
T  53381576 tccgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 53381530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 434 - 471
Target Start/End: Complemental strand, 5775341 - 5775304
Alignment:
Q  434 gggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||||||||||||||||||||||||||||||||    
T  5775341 gggacacgcctaatccgaggagtgtccgtgcttcatag 5775304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 413 - 470
Target Start/End: Complemental strand, 14465063 - 14465006
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 470  Q
    ||||||||| ||| |||||| |||||||| |||||| |||||||||||||||||||||    
T  14465063 acacgacacgtgttcgacactgggacacgtctaatctgaggagtgtccgtgcttcata 14465006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 300 - 365
Target Start/End: Original strand, 28720827 - 28720892
Alignment:
Q  300 ctatgaagcacggatacagacacggacacgacacatactctaacacaccgacacagctaataattt 365  Q
    |||||||||||| |||||||||||||||||||||  || || |||  |||||||||||||||||||    
T  28720827 ctatgaagcacgtatacagacacggacacgacacgaacactgacatgccgacacagctaataattt 28720892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 424 - 473
Target Start/End: Original strand, 37203324 - 37203373
Alignment:
Q  424 gtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagat 473  Q
    ||||||||| |||||||| |||||||||| ||||||||||||||||||||    
T  37203324 gtccgacaccgggacacgtctaatccgagaagtgtccgtgcttcatagat 37203373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 60 - 141
Target Start/End: Complemental strand, 48575559 - 48575478
Alignment:
Q  60 aaaaattgattttgaatgaatctattttgtaaaattgatttttacttaaaatgacccgaatgtaaaatgatttatgtttgaa 141  Q
    ||||||| |||||||||||||  ||||||||||||||||||||  | |||||||   |||||||||||| ||||| ||||||    
T  48575559 aaaaattaattttgaatgaattgattttgtaaaattgatttttgataaaaatgagttgaatgtaaaatggtttatttttgaa 48575478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 473
Target Start/End: Complemental strand, 2362041 - 2361913
Alignment:
Q  342 acacaccgacacagctaataatttnnnnnnnntcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacg 441  Q
    ||||||||||||||||||||||||        | |||| ||| |||||||||| |||||| ||||||  | ||||||| | |||| ||||| | |||||     
T  2362041 acacaccgacacagctaataatttgaaaaaatt-acataatttagtgtaattaaaagtgtcggtgtc--ggacacgactcgtgtctgacaccgagacaca 2361945  T
Q  442 cctaatccgaggagtgtccgtgcttcatagat 473  Q
    ||||||| || |||||||||||||||||||||    
T  2361944 cctaatctgacgagtgtccgtgcttcatagat 2361913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 423 - 471
Target Start/End: Original strand, 16184902 - 16184950
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||||| |||||||||||||||||||||||||  |||||||||||    
T  16184902 tgtccgacactgggacacgcctaatccgaggagtgtttgtgcttcatag 16184950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 423 - 471
Target Start/End: Complemental strand, 18513223 - 18513175
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||||  |||||||||||||| ||||||||||||||||||||||    
T  18513223 tgtccgacaccaggacacgcctaatctgaggagtgtccgtgcttcatag 18513175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 435 - 470
Target Start/End: Original strand, 4383449 - 4383484
Alignment:
Q  435 ggacacgcctaatccgaggagtgtccgtgcttcata 470  Q
    ||||||||||||||||||||||||||||||||||||    
T  4383449 ggacacgcctaatccgaggagtgtccgtgcttcata 4383484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 423 - 470
Target Start/End: Complemental strand, 17425395 - 17425348
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 470  Q
    |||| |||||| ||||||||||||||||||||||||| ||||||||||    
T  17425395 tgtcagacacaaggacacgcctaatccgaggagtgtctgtgcttcata 17425348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 428 - 471
Target Start/End: Original strand, 40784029 - 40784072
Alignment:
Q  428 gacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||    
T  40784029 gacaccgggacacacctaatccgaggagtgtccgtgcttcatag 40784072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 437 - 475
Target Start/End: Complemental strand, 10499261 - 10499223
Alignment:
Q  437 acacgcctaatccgaggagtgtccgtgcttcatagatta 475  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  10499261 acacgcctaatccgaggattgtccgtgcttcatagatta 10499223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 413 - 471
Target Start/End: Complemental strand, 24613688 - 24613630
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||| |||| |||||  ||||||| ||||||| |||||||||||||||||||||    
T  24613688 acacgacacgtgtctgacaccaggacacgtctaatcctaggagtgtccgtgcttcatag 24613630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 434 - 472
Target Start/End: Original strand, 28470447 - 28470485
Alignment:
Q  434 gggacacgcctaatccgaggagtgtccgtgcttcataga 472  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  28470447 gggacatgcctaatccgaggagtgtccgtgcttcataga 28470485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 413 - 471
Target Start/End: Original strand, 35161097 - 35161155
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||| |||||||||| || |||| ||||||||||  ||||||||||||||||||    
T  35161097 acacgacacgtgtccgacaccggaacacacctaatccgaaaagtgtccgtgcttcatag 35161155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 415 - 473
Target Start/End: Original strand, 47264060 - 47264118
Alignment:
Q  415 acgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagat 473  Q
    |||||||||||| |||||  ||||||||||||||||| ||| ||| |||||||||||||    
T  47264060 acgacacatgtctgacaccaggacacgcctaatccgaagagcgtctgtgcttcatagat 47264118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 374 - 471
Target Start/End: Complemental strand, 12895151 - 12895055
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgt---acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 470  Q
    |||||| |||||  |||||||||||||| |||||| |||   |||||||||    ||||||| |||| ||||||||| ||| ||||||||||||||||||    
T  12895151 tcacataattcaaagtaattacaagtgtcggtgtcgtgtcggacacgacac----ccgacaccgggatacgcctaattcgaagagtgtccgtgcttcata 12895056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 434 - 471
Target Start/End: Original strand, 30299011 - 30299048
Alignment:
Q  434 gggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||| |||||||||||||||||||||||||||||    
T  30299011 gggacacgtctaatccgaggagtgtccgtgcttcatag 30299048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 434 - 471
Target Start/End: Original strand, 30327879 - 30327916
Alignment:
Q  434 gggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||| |||||||||||||||||||||||||||||    
T  30327879 gggacacgtctaatccgaggagtgtccgtgcttcatag 30327916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 472
Target Start/End: Original strand, 11931355 - 11931411
Alignment:
Q  416 cgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcataga 472  Q
    |||| ||||||||||||  |||||| ||||||||  |||||||||||||||||||||    
T  11931355 cgacgcatgtccgacaccaggacacacctaatccatggagtgtccgtgcttcataga 11931411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 435 - 471
Target Start/End: Complemental strand, 18844459 - 18844423
Alignment:
Q  435 ggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||||||||||||| ||||||||||||||||||    
T  18844459 ggacacgcctaatccgagaagtgtccgtgcttcatag 18844423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 423 - 471
Target Start/End: Original strand, 23386230 - 23386277
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||| ||||||| |||||||| ||||||||||||||||||||||    
T  23386230 tgtccgaca-agggacatgcctaatcagaggagtgtccgtgcttcatag 23386277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 423 - 471
Target Start/End: Original strand, 30094084 - 30094132
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||| ||||| |||||||||||||||||| ||||||||||||| |||||    
T  30094084 tgtcggacaccgggacacgcctaatccgaagagtgtccgtgctacatag 30094132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 466
Target Start/End: Complemental strand, 3712501 - 3712458
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgctt 466  Q
    |||||||||| |||||||| |||||| |||||||||||||||||    
T  3712501 tgtccgacaccgggacacggctaatctgaggagtgtccgtgctt 3712458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 470
Target Start/End: Complemental strand, 5922579 - 5922532
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 470  Q
    |||||||||| ||||||||||||||| ||||||||||  |||||||||    
T  5922579 tgtccgacactgggacacgcctaatctgaggagtgtctctgcttcata 5922532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 413 - 472
Target Start/End: Original strand, 18966570 - 18966629
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcataga 472  Q
    |||| |||| |||||||||  |||| ||||||||||  ||||||||||||||||||||||    
T  18966570 acacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtccgtgcttcataga 18966629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 437 - 471
Target Start/End: Original strand, 12708227 - 12708261
Alignment:
Q  437 acacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||||||||||||| |||||||||||||||    
T  12708227 acacgcctaatccgaggagcgtccgtgcttcatag 12708261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 417 - 471
Target Start/End: Complemental strand, 12884401 - 12884347
Alignment:
Q  417 gacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||| ||| |||||  ||| |||| |||||||||||||||||||||||||||||    
T  12884401 gacacgtgttcgacatcggggcacgtctaatccgaggagtgtccgtgcttcatag 12884347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 413 - 471
Target Start/End: Complemental strand, 22234877 - 22234819
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||| ||||||||||  ||||||  |||||||||| ||||| ||||||||||||    
T  22234877 acacgacacgtgtccgacaccaggacacagctaatccgagaagtgttcgtgcttcatag 22234819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 416 - 466
Target Start/End: Original strand, 30838285 - 30838335
Alignment:
Q  416 cgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgctt 466  Q
    |||||| ||||||||||   ||||||||||| |||||||||||||||||||    
T  30838285 cgacacgtgtccgacaccaagacacgcctaacccgaggagtgtccgtgctt 30838335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 63 - 101
Target Start/End: Original strand, 38740287 - 38740325
Alignment:
Q  63 aattgattttgaatgaatctattttgtaaaattgatttt 101  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  38740287 aattgattttgaatgaattgattttgtaaaattgatttt 38740325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 473
Target Start/End: Complemental strand, 3144622 - 3144585
Alignment:
Q  436 gacacgcctaatccgaggagtgtccgtgcttcatagat 473  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  3144622 gacacacctaatccgagaagtgtccgtgcttcatagat 3144585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 471
Target Start/End: Complemental strand, 7214523 - 7214466
Alignment:
Q  414 cacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||||||||||||| |||| | ||||||||||| || |||  |||||||||||    
T  7214523 cacgacacatgtccgacaccgggaaatgcctaatccgatgattgtttgtgcttcatag 7214466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 127
Target Start/End: Original strand, 24364096 - 24364169
Alignment:
Q  54 gatgataaaaattgattttgaatgaatctattttgtaaaattgatttttacttaaaatgacccgaatgtaaaat 127  Q
    ||||| |||||||||||||||||||||  ||| ||||||||||||| | ||| ||| |||   |||||||||||    
T  24364096 gatgacaaaaattgattttgaatgaattgattatgtaaaattgattctcactaaaagtgatttgaatgtaaaat 24364169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 95
Target Start/End: Complemental strand, 43868313 - 43868276
Alignment:
Q  58 ataaaaattgattttgaatgaatctattttgtaaaatt 95  Q
    |||||||||||||||||||||||  |||||||||||||    
T  43868313 ataaaaattgattttgaatgaattgattttgtaaaatt 43868276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 471
Target Start/End: Complemental strand, 824252 - 824216
Alignment:
Q  435 ggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  824252 ggacacgtctaatccgaggactgtccgtgcttcatag 824216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 101
Target Start/End: Original strand, 2052054 - 2052094
Alignment:
Q  61 aaaattgattttgaatgaatctattttgtaaaattgatttt 101  Q
    |||||||||||| |||||||| |||||||||||||| ||||    
T  2052054 aaaattgattttaaatgaatcaattttgtaaaattgttttt 2052094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 471
Target Start/End: Original strand, 17876237 - 17876285
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||||  |||||| |||||||| ||||||||| |||||||||||    
T  17876237 tgtccgacaccaggacacacctaatccaaggagtgtctgtgcttcatag 17876285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 409 - 469
Target Start/End: Complemental strand, 28000732 - 28000672
Alignment:
Q  409 ttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 469  Q
    |||| |||||||| |||| ||||| | ||||| ||||||| || |||||||||||||||||    
T  28000732 ttgttcacgacacgtgtctgacaccgagacacacctaatctgatgagtgtccgtgcttcat 28000672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 413 - 473
Target Start/End: Complemental strand, 32273519 - 32273459
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagat 473  Q
    ||||||||| | ||||| || |||||||| | ||||| ||||||||| |||||||||||||    
T  32273519 acacgacacgtatccgatacggggacacgacaaatccaaggagtgtcggtgcttcatagat 32273459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 479
Target Start/End: Original strand, 35239202 - 35239246
Alignment:
Q  435 ggacacgcctaatccgaggagtgtccgtgcttcatagattattat 479  Q
    ||||||| |||||||||||||||||||||| |||||  |||||||    
T  35239202 ggacacgtctaatccgaggagtgtccgtgcctcatacgttattat 35239246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 471
Target Start/End: Complemental strand, 36409504 - 36409444
Alignment:
Q  411 gtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||||||||||| |||| |||||||| ||||    |||||||||||||||| ||||    
T  36409504 gtacacgacacatgtcctacaccgggacacgtctaaggtaaggagtgtccgtgctttatag 36409444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 471
Target Start/End: Complemental strand, 36423670 - 36423610
Alignment:
Q  411 gtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||||||||||| |||| |||||||| ||||    |||||||||||||||| ||||    
T  36423670 gtacacgacacatgtcctacaccgggacacgtctaaggtaaggagtgtccgtgctttatag 36423610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 441; Significance: 0; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 441; E-Value: 0
Query Start/End: Original strand, 1 - 501
Target Start/End: Complemental strand, 5291 - 4791
Alignment:
Q  1 cgctcttttgctttctctgatcctatcataatttagtgcatgtttggttcacggatgataaaaattgattttgaatgaatctattttgtaaaattgattt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  5291 cgctcttttgctttctctgatcctatcataatttagtgcatgtttggttcatggatgataaaaattgattttgaatgaatctattttgtaaaattgattt 5192  T
Q  101 ttacttaaaatgacccgaatgtaaaatgatttatgtttgaacacatctacctaaagttaacaataaatttcgtgttaacaataaatgtactgtnnnnnnn 200  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           
T  5191 ttacttaaaatgactcgaatgtaaaatgatttatgtttgaacacatctacctaaagttaacaataaatttcgtgttaacaataaatgtactgtaaaaaaa 5092  T
Q  201 ncaataaattttagggtaaaaatcaagtttagactcaatgattacaaattctatattcaagttaaaatcaactatggaggcaaaattaattattaatatc 300  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5091 acaataaattttagggtaaaaatcaagtttagactcaatgattacaaattctatattcaagttaaaatcaactatggaggcaaaattaattattaatatc 4992  T
Q  301 tatgaagcacggatacagacacggacacgacacatactctaacacaccgacacagctaataatttnnnnnnnntcacattattcagtgtaattacaagtg 400  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||| ||||||||||||||||||||    
T  4991 tatgaagcacggatacagacacggacacgacacatactctaacacaccgacacagctaataatttaaaaaaaatcacataattcagtgtaattacaagtg 4892  T
Q  401 ttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagattattatgagtattagaaaagtttgatg 500  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4891 ttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagattattatgagtattagaaaagtttgatg 4792  T
Q  501 a 501  Q
    |    
T  4791 a 4791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 69; Significance: 1e-30; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 376 - 475
Target Start/End: Original strand, 20503491 - 20503588
Alignment:
Q  376 acattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagatta 475  Q
    |||| ||||||||||||||||||||| |||||  || |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  20503491 acataattcagtgtaattacaagtgtcggtgt--tggacacgacacatgtctgacaccgggacacgcctaatccgaggagtgtccgtgcttcatagatta 20503588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 374 - 469
Target Start/End: Original strand, 28918025 - 28918120
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 469  Q
    |||||| ||||||||||||||||||||| |||||| || ||||||||| |||||||||| |||||||||||||||| |||||||||| ||||||||    
T  28918025 tcacataattcagtgtaattacaagtgtcggtgtcgtggacacgacacgtgtccgacactgggacacgcctaatccaaggagtgtccctgcttcat 28918120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 374 - 471
Target Start/End: Original strand, 27505270 - 27505370
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgt---acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 470  Q
    |||||| ||| ||||||||||||||||| |||||| |||   ||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||    
T  27505270 tcacataattaagtgtaattacaagtgtcggtgtcgtgtctgacacgacacgtgtccgacaccgggacatgcctaatccgaggagtgtccgtgcttcata 27505369  T
Q  471 g 471  Q
    |    
T  27505370 g 27505370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 374 - 471
Target Start/End: Complemental strand, 40993370 - 40993275
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||| |||||||||||||| | |||| ||||||  | |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  40993370 tcacataattcagtgtaattatatgtgtcggtgtc--ggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtccatgcttcatag 40993275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 374 - 471
Target Start/End: Original strand, 55401099 - 55401194
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||| ||| ||||||||||||||||| ||||||  | ||||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||    
T  55401099 tcacataatttagtgtaattacaagtgtcggtgtc--ggacacgacacgtgtccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 55401194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 374 - 471
Target Start/End: Original strand, 10954976 - 10955074
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgagg---agtgtccgtgcttcata 470  Q
    |||||| |||||||||||| |||||||| ||||||  | ||||||||| |||||||||| ||||||||||||||||||||   |||||||||||||||||    
T  10954976 tcacataattcagtgtaatcacaagtgtcggtgtc--ggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcata 10955073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 374 - 471
Target Start/End: Complemental strand, 41961685 - 41961579
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgt---------acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgc 464  Q
    ||||||||||| |||||||||||||||| |||||| |||         ||||||||| |||||||||| ||||||||||||||||||| |||||||||||    
T  41961685 tcacattattcggtgtaattacaagtgtcggtgtcgtgtcggtatcggacacgacacgtgtccgacactgggacacgcctaatccgagaagtgtccgtgc 41961586  T
Q  465 ttcatag 471  Q
    |||||||    
T  41961585 ttcatag 41961579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 374 - 469
Target Start/End: Complemental strand, 4987326 - 4987222
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgt---------acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgc 464  Q
    |||||| |||||||||||||||||||||||||| | |||         ||||||||| |||||||||| ||||||||||||||||||||||||||||| |    
T  4987326 tcacataattcagtgtaattacaagtgttggtgacgtgtcggtgttggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtac 4987227  T
Q  465 ttcat 469  Q
    |||||    
T  4987226 ttcat 4987222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 376 - 470
Target Start/End: Complemental strand, 16000049 - 15999951
Alignment:
Q  376 acattattcagtgtaattacaagtgttggtgtctt----gtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 470  Q
    |||| ||||||||||| ||||||||| ||||||      ||||||||||| |||||||||| |||||||||||||||| |||||||||||||| |||||    
T  16000049 acataattcagtgtaactacaagtgtcggtgtcggacacgtacacgacacgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgcatcata 15999951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 423 - 471
Target Start/End: Complemental strand, 34185100 - 34185052
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  34185100 tgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 34185052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 374 - 471
Target Start/End: Complemental strand, 49651821 - 49651716
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgt--------acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgct 465  Q
    |||||| ||||| ||||||||||||||| |||||| |||        ||||||||||| |||||||| ||||||| ||||||||||| ||||||||||||    
T  49651821 tcacataattcactgtaattacaagtgtcggtgtcgtgtcggaccggacacgacacatatccgacaccgggacacacctaatccgagaagtgtccgtgct 49651722  T
Q  466 tcatag 471  Q
    ||||||    
T  49651721 tcatag 49651716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 381 - 471
Target Start/End: Original strand, 7171532 - 7171620
Alignment:
Q  381 attcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||| |||||||||||||||||||||||  | ||||||||| |||||||||| | |||||||||||||| ||||||||   ||||||||||    
T  7171532 attcggtgtaattacaagtgttggtgtc--ggacacgacacgtgtccgacaccgcgacacgcctaatccaaggagtgtatatgcttcatag 7171620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 423 - 478
Target Start/End: Original strand, 11610580 - 11610635
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagattatta 478  Q
    |||||||||  ||||||||||||||| |||||||||||||||||||||||||||||    
T  11610580 tgtccgacatcgggacacgcctaatctgaggagtgtccgtgcttcatagattatta 11610635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 374 - 469
Target Start/End: Original strand, 25775533 - 25775624
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 469  Q
    |||||| ||||||||||||||||||||| ||||||  | ||||| |   ||||||||||  |||||||||||||||||||||||| ||||||||||    
T  25775533 tcacataattcagtgtaattacaagtgtcggtgtc--ggacacgtcg--tgtccgacaccaggacacgcctaatccgaggagtgttcgtgcttcat 25775624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 423 - 476
Target Start/End: Original strand, 40052383 - 40052436
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagattat 476  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||| ||||    
T  40052383 tgtccgacaccgggacacgcctaatccgaggagtgttcgtgcttcataggttat 40052436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 418 - 470
Target Start/End: Complemental strand, 8789541 - 8789489
Alignment:
Q  418 acacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 470  Q
    ||||||||| ||||| | |||||||||||||||||||||||||||||||||||    
T  8789541 acacatgtcggacaccgagacacgcctaatccgaggagtgtccgtgcttcata 8789489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 298 - 470
Target Start/End: Original strand, 14216841 - 14217021
Alignment:
Q  298 atctatgaagcacggatacagacacggacacgacacatactctaacacaccgacacagctaataatttnnnnnnnntcacattattcagtgtaattacaa 397  Q
    ||||||||||||||||| | ||||| ||||||||||  || || ||||  ||||||| ||||||||||        ||| || |||||||||||||||||    
T  14216841 atctatgaagcacggatgcggacacagacacgacacggacactgacacgtcgacacaactaataattttaaaata-tcatataattcagtgtaattacaa 14216939  T
Q  398 gtgttggtgtcttgt---------acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 470  Q
    ||||  ||||| |||         ||||||||| ||| |||||| ||||||| ||||||||||| |||||||||||||||||    
T  14216940 gtgtccgtgtcgtgttagtgtcggacacgacacgtgtacgacactgggacacacctaatccgagaagtgtccgtgcttcata 14217021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 298 - 470
Target Start/End: Original strand, 14222970 - 14223150
Alignment:
Q  298 atctatgaagcacggatacagacacggacacgacacatactctaacacaccgacacagctaataatttnnnnnnnntcacattattcagtgtaattacaa 397  Q
    ||||||||||||||||| | ||||| ||||||||||  || || ||||  ||||||| ||||||||||        ||| || |||||||||||||||||    
T  14222970 atctatgaagcacggatgcggacacagacacgacacggacactgacacgtcgacacaactaataattttaaaata-tcatataattcagtgtaattacaa 14223068  T
Q  398 gtgttggtgtcttgt---------acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 470  Q
    ||||  ||||| |||         ||||||||| ||| |||||| ||||||| ||||||||||| |||||||||||||||||    
T  14223069 gtgtccgtgtcgtgttagtgtcggacacgacacgtgtacgacactgggacacacctaatccgagaagtgtccgtgcttcata 14223150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 413 - 464
Target Start/End: Original strand, 3631745 - 3631796
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgc 464  Q
    ||||||||||||||||||||  ||||||||||| ||||||||||||||||||    
T  3631745 acacgacacatgtccgacaccaggacacgcctagtccgaggagtgtccgtgc 3631796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 381 - 471
Target Start/End: Complemental strand, 26492233 - 26492145
Alignment:
Q  381 attcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||||||||||||| | ||||||  | |||||||||||||| |||||   |||||| |||||||||||| |||||| |||||||||    
T  26492233 attcagtgtaattacaagtatcggtgtc--ggacacgacacatgtctgacaccaagacacgtctaatccgaggaatgtccgcgcttcatag 26492145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 374 - 471
Target Start/End: Original strand, 35222962 - 35223057
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||| ||||| |||||||| | |||| ||||||  | ||| ||||| |||| ||||| ||||||||| | ||||||||||||||||||||||||||    
T  35222962 tcacataattcaatgtaattatatgtgtcggtgtc--ggacatgacacgtgtctgacacggggacacgctttatccgaggagtgtccgtgcttcatag 35223057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 436 - 473
Target Start/End: Original strand, 8842413 - 8842450
Alignment:
Q  436 gacacgcctaatccgaggagtgtccgtgcttcatagat 473  Q
    ||||||||||||||||||||||||||||||||||||||    
T  8842413 gacacgcctaatccgaggagtgtccgtgcttcatagat 8842450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 435 - 471
Target Start/End: Complemental strand, 4990948 - 4990912
Alignment:
Q  435 ggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||||||||||||||||||||||||||||||||    
T  4990948 ggacacgcctaatccgaggagtgtccgtgcttcatag 4990912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 423 - 471
Target Start/End: Original strand, 25074866 - 25074914
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||||| ||||||| ||||||||||||||||| ||||||||||||    
T  25074866 tgtccgacactgggacacacctaatccgaggagtgttcgtgcttcatag 25074914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 413 - 469
Target Start/End: Original strand, 29508511 - 29508567
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 469  Q
    |||||||||| ||||||||| |||||||| ||||||| || ||||||||||||||||    
T  29508511 acacgacacacgtccgacaccgggacacgtctaatccaagaagtgtccgtgcttcat 29508567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 413 - 471
Target Start/End: Complemental strand, 5441026 - 5440967
Alignment:
Q  413 acacgacacatgtccgacacagggacacg-cctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||||||||| |||| | |||||| |||||| |||||||||||||||||||||||    
T  5441026 acacgacacatgtccaacaccgagacacggcctaattcgaggagtgtccgtgcttcatag 5440967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 428 - 471
Target Start/End: Original strand, 14979225 - 14979268
Alignment:
Q  428 gacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||    
T  14979225 gacaccgggacacgcctaacccgaggagtgtccgtgcttcatag 14979268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 381 - 475
Target Start/End: Original strand, 16789043 - 16789145
Alignment:
Q  381 attcagtgtaattacaagtgttggtgtcttgt---------acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||||||||| ||||||||||||| |||         ||| ||||||||||| |||| ||||||| ||||||  ||||||||||||||||||||||    
T  16789043 attcagtgtaattataagtgttggtgtcgtgtcagtgtcggacatgacacatgtccaacac-gggacacacctaatttgaggagtgtccgtgcttcatag 16789141  T
Q  472 atta 475  Q
    ||||    
T  16789142 atta 16789145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 413 - 476
Target Start/End: Original strand, 28812587 - 28812650
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagattat 476  Q
    |||||| ||||||||||||   ||||||||||||||||||||||||| |||| |||||| ||||    
T  28812587 acacgatacatgtccgacagcaggacacgcctaatccgaggagtgtctgtgcctcataggttat 28812650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 423 - 469
Target Start/End: Complemental strand, 24205029 - 24204983
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 469  Q
    ||||||||||  ||||||||||||| |||||||||||||||||||||    
T  24205029 tgtccgacaccaggacacgcctaattcgaggagtgtccgtgcttcat 24204983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 470
Target Start/End: Complemental strand, 32804551 - 32804485
Alignment:
Q  404 gtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 470  Q
    |||||| | |||||||||||||||| ||| |  | |||||||||| |||||||||||||||||||||    
T  32804551 gtgtctcggacacgacacatgtccgccactgaaaaacgcctaatctgaggagtgtccgtgcttcata 32804485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 428 - 470
Target Start/End: Original strand, 34910393 - 34910435
Alignment:
Q  428 gacacagggacacgcctaatccgaggagtgtccgtgcttcata 470  Q
    ||||| |||||||| ||||||||||||||||||||||||||||    
T  34910393 gacaccgggacacgtctaatccgaggagtgtccgtgcttcata 34910435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 434 - 475
Target Start/End: Complemental strand, 3730145 - 3730104
Alignment:
Q  434 gggacacgcctaatccgaggagtgtccgtgcttcatagatta 475  Q
    ||||||| ||||||||||||||||||| ||||||||||||||    
T  3730145 gggacacacctaatccgaggagtgtccatgcttcatagatta 3730104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 300 - 365
Target Start/End: Complemental strand, 14223961 - 14223896
Alignment:
Q  300 ctatgaagcacggatacagacacggacacgacacatactctaacacaccgacacagctaataattt 365  Q
    |||||||||||| | |||||||||||||||||||| || |  |||| ||||||||| |||||||||    
T  14223961 ctatgaagcacgaacacagacacggacacgacacagacaccgacacgccgacacagataataattt 14223896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 415 - 472
Target Start/End: Original strand, 18427012 - 18427069
Alignment:
Q  415 acgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcataga 472  Q
    ||||||| |||||| ||| ||||||| ||||||| |||||||||||||| ||||||||    
T  18427012 acgacacgtgtccggcaccgggacacacctaatctgaggagtgtccgtgtttcataga 18427069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 435 - 472
Target Start/End: Original strand, 21861658 - 21861695
Alignment:
Q  435 ggacacgcctaatccgaggagtgtccgtgcttcataga 472  Q
    |||||| |||||||||||||||||||||||||||||||    
T  21861658 ggacacacctaatccgaggagtgtccgtgcttcataga 21861695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 421 - 470
Target Start/End: Original strand, 37077439 - 37077488
Alignment:
Q  421 catgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 470  Q
    |||||||||||| ||||||| |||||||| |||| |||||||||||||||    
T  37077439 catgtccgacacggggacacacctaatccaaggaatgtccgtgcttcata 37077488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 423 - 471
Target Start/End: Complemental strand, 3164019 - 3163971
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||||| | |||||||||||| |||||||||||| ||||||||||    
T  3164019 tgtccgacaccgagacacgcctaattcgaggagtgtccatgcttcatag 3163971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 423 - 471
Target Start/End: Complemental strand, 4466588 - 4466540
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||||| |||||||| || || |||||||||||||||||||||||    
T  4466588 tgtccgacactgggacacggcttattcgaggagtgtccgtgcttcatag 4466540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 469
Target Start/End: Original strand, 13806308 - 13806363
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 469  Q
    |||| ||||||| ||||| | |||||||||||||||||| |||||||||||||||||    
T  13806308 acacaacacatgaccgaccccgggacacgcctaatccga-gagtgtccgtgcttcat 13806363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 471
Target Start/End: Complemental strand, 13845550 - 13845465
Alignment:
Q  384 cagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||||| | |||| ||||||  | |||||| || |||| ||||| | ||||||||| |||| |||||||||||||||||||||    
T  13845550 cagtgtaattatatgtgtcggtgtc--ggacacgagacgtgtctgacacggagacacgccttatccaaggagtgtccgtgcttcatag 13845465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 423 - 471
Target Start/End: Original strand, 21211365 - 21211413
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||||| ||||||| |||||||||||||||||  |||||||||||    
T  21211365 tgtccgacactgggacactcctaatccgaggagtgtttgtgcttcatag 21211413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 56 - 100
Target Start/End: Complemental strand, 49158699 - 49158655
Alignment:
Q  56 tgataaaaattgattttgaatgaatctattttgtaaaattgattt 100  Q
    ||||| |||||||||||||||||||  ||||||||||||||||||    
T  49158699 tgatataaattgattttgaatgaattgattttgtaaaattgattt 49158655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 423 - 471
Target Start/End: Original strand, 52369858 - 52369906
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||| |||| ||||||| |||| |||||||||||||||||||||||||    
T  52369858 tgtccaacaccgggacacacctattccgaggagtgtccgtgcttcatag 52369906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 470
Target Start/End: Original strand, 1389909 - 1389956
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 470  Q
    ||||||||||  ||||| ||||||||| ||||||||||||||||||||    
T  1389909 tgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 1389956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 466
Target Start/End: Original strand, 1509638 - 1509681
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgctt 466  Q
    |||||||||| || |||||||||||| |||||||||||||||||    
T  1509638 tgtccgacaccggtacacgcctaatcggaggagtgtccgtgctt 1509681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 328
Target Start/End: Complemental strand, 3164143 - 3164112
Alignment:
Q  297 tatctatgaagcacggatacagacacggacac 328  Q
    ||||||||||||||||||||||||||||||||    
T  3164143 tatctatgaagcacggatacagacacggacac 3164112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 420 - 471
Target Start/End: Complemental strand, 8039815 - 8039764
Alignment:
Q  420 acatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||||||| ||||||||| |||||||| |||| || |||||||||||    
T  8039815 acatgtccgacaccgggacacgcttaatccgaagagtatctgtgcttcatag 8039764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 437 - 472
Target Start/End: Original strand, 11252061 - 11252096
Alignment:
Q  437 acacgcctaatccgaggagtgtccgtgcttcataga 472  Q
    ||||||||||||||||||||||| ||||||||||||    
T  11252061 acacgcctaatccgaggagtgtctgtgcttcataga 11252096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 365
Target Start/End: Original strand, 11665905 - 11665960
Alignment:
Q  311 ggatacagacac-ggacacgacacatactctaacacaccgacacagctaataattt 365  Q
    |||||||||||| |||||||||||| || ||||||||||||||  |||||||||||    
T  11665905 ggatacagacaccggacacgacacacacactaacacaccgacaacgctaataattt 11665960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 427 - 474
Target Start/End: Original strand, 14829776 - 14829823
Alignment:
Q  427 cgacacagggacacgcctaatccgaggagtgtccgtgcttcatagatt 474  Q
    |||||| ||||||||||||||| ||||| |||||||||||| ||||||    
T  14829776 cgacaccgggacacgcctaatctgaggaatgtccgtgcttcgtagatt 14829823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 416 - 470
Target Start/End: Original strand, 15864897 - 15864950
Alignment:
Q  416 cgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 470  Q
    |||||| |||| ||||| |||||||||||||||| | ||||||||||||||||||    
T  15864897 cgacacgtgtctgacac-gggacacgcctaatccaaagagtgtccgtgcttcata 15864950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 417 - 471
Target Start/End: Original strand, 17276792 - 17276846
Alignment:
Q  417 gacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||| |||||||||| | ||| | ||||||||||| ||||||||||||||||||    
T  17276792 gacacgtgtccgacaccgagacgcacctaatccgagaagtgtccgtgcttcatag 17276846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 57 - 95
Target Start/End: Original strand, 27481143 - 27481181
Alignment:
Q  57 gataaaaattgattttgaatgaatctattttgtaaaatt 95  Q
    ||||||| |||||||||||||||| ||||||||||||||    
T  27481143 gataaaatttgattttgaatgaatttattttgtaaaatt 27481181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 63 - 101
Target Start/End: Complemental strand, 30958209 - 30958171
Alignment:
Q  63 aattgattttgaatgaatctattttgtaaaattgatttt 101  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  30958209 aattgattttgaatgaattgattttgtaaaattgatttt 30958171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 63 - 101
Target Start/End: Complemental strand, 30974021 - 30973983
Alignment:
Q  63 aattgattttgaatgaatctattttgtaaaattgatttt 101  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  30974021 aattgattttgaatgaattgattttgtaaaattgatttt 30973983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 471
Target Start/End: Original strand, 8903517 - 8903554
Alignment:
Q  434 gggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||| ||||||||||||||||| ||||||||||||    
T  8903517 gggacacacctaatccgaggagtgttcgtgcttcatag 8903554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 423 - 468
Target Start/End: Original strand, 12100340 - 12100385
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttca 468  Q
    |||||||||| ||||||| |||| ||||||||||| ||||||||||    
T  12100340 tgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 12100385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 99
Target Start/End: Original strand, 27825291 - 27825328
Alignment:
Q  62 aaattgattttgaatgaatctattttgtaaaattgatt 99  Q
    ||||||||||||||||||| |||||| |||||||||||    
T  27825291 aaattgattttgaatgaatttattttataaaattgatt 27825328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 469
Target Start/End: Complemental strand, 40150560 - 40150527
Alignment:
Q  436 gacacgcctaatccgaggagtgtccgtgcttcat 469  Q
    ||||| ||||||||||||||||||||||||||||    
T  40150560 gacacacctaatccgaggagtgtccgtgcttcat 40150527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 427 - 471
Target Start/End: Complemental strand, 2408634 - 2408590
Alignment:
Q  427 cgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||| |||||||||||||||  |||||| ||||||||||||||    
T  2408634 cgacaccgggacacgcctaatctaaggagtctccgtgcttcatag 2408590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 413 - 461
Target Start/End: Complemental strand, 6525681 - 6525633
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccg 461  Q
    |||| |||||||||||| || | ||||| ||||||||||||||||||||    
T  6525681 acacaacacatgtccgataccgagacacacctaatccgaggagtgtccg 6525633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 467
Target Start/End: Complemental strand, 21256984 - 21256952
Alignment:
Q  435 ggacacgcctaatccgaggagtgtccgtgcttc 467  Q
    |||||| ||||||||||||||||||||||||||    
T  21256984 ggacacacctaatccgaggagtgtccgtgcttc 21256952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 39657978 - 39658029
Alignment:
Q  58 ataaaaattgattttgaatgaatctattttgtaaaattgatttttacttaaaa 110  Q
    ||||||||||||||||||| |||  ||| ||||||||||| ||||||||||||    
T  39657978 ataaaaattgattttgaataaattgattatgtaaaattga-ttttacttaaaa 39658029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 63 - 139
Target Start/End: Original strand, 41115275 - 41115351
Alignment:
Q  63 aattgattttgaatgaatctattttgtaaaattgatttttacttaaaatgacccgaatgtaaaatgatttatgtttg 139  Q
    |||||||| |||||||||  |||||||| ||||||||||  || | |||||   |||||||||||| ||||||||||    
T  41115275 aattgattatgaatgaattgattttgtataattgattttggctaacaatgagttgaatgtaaaatggtttatgtttg 41115351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 1e-30; HSPs: 68)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 374 - 469
Target Start/End: Complemental strand, 2438754 - 2438661
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 469  Q
    |||||| ||||||||||||||||||||| ||||||  | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  2438754 tcacataattcagtgtaattacaagtgtcggtgtc--ggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 2438661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 376 - 471
Target Start/End: Complemental strand, 18841046 - 18840953
Alignment:
Q  376 acattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||| ||| ||||||||||||||||| ||||||    |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  18841046 acataattaagtgtaattacaagtgtcggtgtcag--acacgacacatgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 18840953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 301 - 471
Target Start/End: Complemental strand, 38117261 - 38117099
Alignment:
Q  301 tatgaagcacggatacagacac-ggacacgacacatactctaacacaccgacacagctaataatttnnnnnnnntcacattattcagtgtaattacaagt 399  Q
    |||||||||||||||| ||||| |||||||||||      | |||| |||||||||||||||||||        ||||||  ||| ||||||||||||||    
T  38117261 tatgaagcacggatacggacaccggacacgacac------tgacacgccgacacagctaataatttgaaaaaa-tcacatacttcggtgtaattacaagt 38117169  T
Q  400 gttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||||  | |||| |||| |||||||||| |||||||||||||||||||| |||||||||||||||||    
T  38117168 gttggtgtc--ggacacaacacgtgtccgacaccgggacacgcctaatccgaggggtgtccgtgcttcatag 38117099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 413 - 473
Target Start/End: Original strand, 26769583 - 26769643
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagat 473  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  26769583 acacgacacgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttcatagat 26769643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 374 - 470
Target Start/End: Original strand, 28596493 - 28596587
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 470  Q
    |||||| | |||||||||||| |||||| ||||||  | ||||||||| ||||||||||  |||||| |||||||||||||||||||||||||||||    
T  28596493 tcacataagtcagtgtaattataagtgtcggtgtc--ggacacgacacgtgtccgacactcggacactcctaatccgaggagtgtccgtgcttcata 28596587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 381 - 471
Target Start/End: Original strand, 15972904 - 15972992
Alignment:
Q  381 attcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||||||||||||||| ||||||  | ||||||||| |||||||| | ||||||| |||||||||| || ||||||||||||||||    
T  15972904 attcagtgtaattacaagtgtcggtgtc--ggacacgacacgtgtccgacgccgggacacacctaatccgaagaatgtccgtgcttcatag 15972992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 374 - 472
Target Start/End: Original strand, 37559001 - 37559097
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcataga 472  Q
    |||||| ||||| ||||||||||||||| ||||||  | ||  ||||| |||||||||| || |||||| |||||||||||||||||||||||||||||    
T  37559001 tcacataattcaatgtaattacaagtgtcggtgtc--ggacttgacacgtgtccgacaccggtacacgcttaatccgaggagtgtccgtgcttcataga 37559097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 413 - 471
Target Start/End: Complemental strand, 42511380 - 42511322
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  42511380 acacaacacgtgtccgacacagggacacggctaatccgaggagtgtccgtgcttcatag 42511322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 300 - 459
Target Start/End: Complemental strand, 14996332 - 14996171
Alignment:
Q  300 ctatgaagcacggatacagacacggacacgacacatactctaacacaccgacacagctaataatttnnnnnnnntcacattattcagtgtaattacaagt 399  Q
    ||||||||||||||||| ||| | |||| |||||  || || |||  |||||||||||||||||||        ||| || ||| |||||||||||||||    
T  14996332 ctatgaagcacggatacggacgcagacatgacacggacactgacaagccgacacagctaataatttgaaaaaaatcatataatttagtgtaattacaagt 14996233  T
Q  400 gttggtgtcttgt---acacgacacatgtccgacacagggacacgcctaatccgaggagtgtc 459  Q
    || ||||||||||   |||| |||| |||| ||||| || |||||||||||||||||||||||    
T  14996232 gtcggtgtcttgtcggacac-acacgtgtctgacaccggaacacgcctaatccgaggagtgtc 14996171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 423 - 471
Target Start/End: Original strand, 37419825 - 37419873
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  37419825 tgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 37419873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 376 - 472
Target Start/End: Complemental strand, 11223896 - 11223792
Alignment:
Q  376 acattattcagtgtaattacaagtgttggtgtcttgta---------cacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgctt 466  Q
    |||| ||||||||||||||||||||| |||||| ||||         |||||||| |||| ||||| ||||||||||||||| |||||||||||||||||    
T  11223896 acataattcagtgtaattacaagtgtcggtgtcatgtaggtgtcggacacgacac-tgtctgacaccgggacacgcctaatctgaggagtgtccgtgctt 11223798  T
Q  467 cataga 472  Q
    ||||||    
T  11223797 cataga 11223792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 300 - 365
Target Start/End: Original strand, 23717977 - 23718042
Alignment:
Q  300 ctatgaagcacggatacagacacggacacgacacatactctaacacaccgacacagctaataattt 365  Q
    |||||||||||||||||||||||||||| |||||  || || |||||||||||| |||||||||||    
T  23717977 ctatgaagcacggatacagacacggacatgacacggacactgacacaccgacaccgctaataattt 23718042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 300 - 365
Target Start/End: Original strand, 24105649 - 24105714
Alignment:
Q  300 ctatgaagcacggatacagacacggacacgacacatactctaacacaccgacacagctaataattt 365  Q
    |||||||||||||||||||||||||||| |||||  || || |||||||||||| |||||||||||    
T  24105649 ctatgaagcacggatacagacacggacatgacacggacactgacacaccgacaccgctaataattt 24105714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 413 - 472
Target Start/End: Original strand, 24009356 - 24009415
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcataga 472  Q
    ||||||||| |||| ||||| ||||||||||| |||| ||||||||||||||||||||||    
T  24009356 acacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcataga 24009415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 413 - 476
Target Start/End: Complemental strand, 30717517 - 30717454
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagattat 476  Q
    ||||||||| ||| |||||| |||| ||||||||||| ||||||||||||||||||||| ||||    
T  30717517 acacgacacgtgttcgacactgggatacgcctaatccaaggagtgtccgtgcttcatagcttat 30717454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 413 - 476
Target Start/End: Original strand, 35056940 - 35057003
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagattat 476  Q
    ||||||||| |||||||||| |  |||||||||||| |||||||||||||||||||||| ||||    
T  35056940 acacgacacgtgtccgacacggaaacacgcctaatctgaggagtgtccgtgcttcatagcttat 35057003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 374 - 463
Target Start/End: Original strand, 5040758 - 5040845
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtg 463  Q
    |||||| ||||| ||||||||||||||| ||||||  | ||||||||  |||||||| | |||||||||||| ||| |||||||||||||    
T  5040758 tcacataattcaatgtaattacaagtgtcggtgtc--ggacacgacatgtgtccgacgccgggacacgcctagtccaaggagtgtccgtg 5040845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 413 - 471
Target Start/End: Complemental strand, 15907909 - 15907851
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||||| |||||||| |||||||||| |||| || |||||||||||||||||||    
T  15907909 acacgacacatatccgacaccgggacacgcccaatctgatgagtgtccgtgcttcatag 15907851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 374 - 471
Target Start/End: Original strand, 18622630 - 18622721
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||| |||||||||||||| | ||||||||||| |||      || |||||| |||| ||||||| | ||||||||||||||||||||||||||||    
T  18622630 tcacataattcagtgtaattatacgtgttggtgtcgtgt------catatgtcctacaccgggacacacttaatccgaggagtgtccgtgcttcatag 18622721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 301 - 464
Target Start/End: Original strand, 21624217 - 21624374
Alignment:
Q  301 tatgaagcacggatacagacacgga-cacgacacatactctaacacaccgacacagctaataatttnnnnnnnntcacattattcagtgtaattacaagt 399  Q
    |||||||| ||||||| ||||| || ||||||||| || || |||| |||||||||||||||||||        |  ||| |||||||||||||||||||    
T  21624217 tatgaagcccggatacggacaccgaacacgacacagacactgacacgccgacacagctaataattttaaaaaaatagcataattcagtgtaattacaagt 21624316  T
Q  400 gttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgc 464  Q
    || ||||||        ||||| |||||||||  ||||||| |||||||| ||||||||||||||    
T  21624317 gtcggtgtc-------ggacacgtgtccgacagcgggacacacctaatccaaggagtgtccgtgc 21624374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 374 - 471
Target Start/End: Complemental strand, 30404885 - 30404790
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||| ||||||||||||||||||||| || |||  | ||||||||||||||||||||  ||||| |||||||| ||| || ||  |||||||||||    
T  30404885 tcacataattcagtgtaattacaagtgtcggcgtc--ggacacgacacatgtccgacaccaggacatgcctaatctgagaagcgtttgtgcttcatag 30404790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 374 - 458
Target Start/End: Complemental strand, 29176528 - 29176446
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgt 458  Q
    |||||| |||||||||||||| |||||||||||  ||| ||||| |||||||||||||| | ||||| |||||||| || |||||    
T  29176528 tcacataattcagtgtaattataagtgttggtg--ttggacacggcacatgtccgacactgagacacacctaatccaagaagtgt 29176446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 387 - 458
Target Start/End: Original strand, 12224260 - 12224329
Alignment:
Q  387 tgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgt 458  Q
    ||||||||||||||| ||||||  | |||||| || |||||||||| |||||||||||||||| ||||||||    
T  12224260 tgtaattacaagtgtcggtgtc--ggacacgatacgtgtccgacactgggacacgcctaatccaaggagtgt 12224329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 423 - 471
Target Start/End: Complemental strand, 15909618 - 15909570
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||||||||||||||||||| ||| |||||| ||||||||||||    
T  15909618 tgtccgacacagggacacgcctaattcgaagagtgttcgtgcttcatag 15909570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 300 - 468
Target Start/End: Original strand, 21091674 - 21091839
Alignment:
Q  300 ctatgaagcacggatacagacacggacacgacacatactctaacacaccgacacagctaataatttnnnnnnnntcacattattcagtgtaattacaagt 399  Q
    |||||||||||||||||| |||||||||| | ||  || || |||||||||||| |||||||||||        | ||||  ||||||||||||||||||    
T  21091674 ctatgaagcacggatacaaacacggacacaagacggacactgacacaccgacaccgctaataattt-aagaaaataacatacttcagtgtaattacaagt 21091772  T
Q  400 gttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttca 468  Q
    ||  |||||    ||| | ||| |||| ||||| ||||||| |||| ||||| ||||||||||||||||    
T  21091773 gtcagtgtc--agacaagccacctgtcggacaccgggacacacctattccgaagagtgtccgtgcttca 21091839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 300 - 365
Target Start/End: Complemental strand, 21374809 - 21374742
Alignment:
Q  300 ctatgaagcacggatacagacacggacac--gacacatactctaacacaccgacacagctaataattt 365  Q
    ||||||||||||||||| |||||||||||  |||||  || ||||||| |||||||||||||||||||    
T  21374809 ctatgaagcacggatacggacacggacaccggacacggacactaacacgccgacacagctaataattt 21374742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 413 - 473
Target Start/End: Complemental strand, 34784969 - 34784909
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagat 473  Q
    ||||||||| |||| ||||| ||||||||||| || ||||||||||| |||||||||||||    
T  34784969 acacgacacctgtctgacacggggacacgccttattcgaggagtgtctgtgcttcatagat 34784909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 374 - 472
Target Start/End: Original strand, 974771 - 974871
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtc---ttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 470  Q
    |||||||||||||||||||||||||||| ||||||   ||| ||||||||  ||| | |||  ||||||||| ||||||| || ||||| ||||||||||    
T  974771 tcacattattcagtgtaattacaagtgtcggtgtcgtgttggacacgacatgtgt-ctacaacgggacacgcttaatccggggggtgtctgtgcttcata 974869  T
Q  471 ga 472  Q
    ||    
T  974870 ga 974871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 423 - 466
Target Start/End: Complemental strand, 23058432 - 23058389
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgctt 466  Q
    |||||||||| ||||||||||||||||||| |||||||||||||    
T  23058432 tgtccgacaccgggacacgcctaatccgagaagtgtccgtgctt 23058389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 416 - 471
Target Start/End: Original strand, 41843510 - 41843565
Alignment:
Q  416 cgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||| |||||||||| ||||||||| | |||||||||||||| |||||||||||    
T  41843510 cgacacgtgtccgacacggggacacgctttatccgaggagtgtctgtgcttcatag 41843565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 428 - 470
Target Start/End: Complemental strand, 3444869 - 3444827
Alignment:
Q  428 gacacagggacacgcctaatccgaggagtgtccgtgcttcata 470  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  3444869 gacactgggacatgcctaatccgaggagtgtccgtgcttcata 3444827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 423 - 469
Target Start/End: Original strand, 19942336 - 19942382
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 469  Q
    |||| ||||| ||||||||||||||||||||||||||| ||||||||    
T  19942336 tgtctgacaccgggacacgcctaatccgaggagtgtccatgcttcat 19942382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 374 - 471
Target Start/End: Complemental strand, 20242762 - 20242667
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||| |||||||||||||| | |||| ||||||  | |||| |||| |||| |||||  |||||||||| |||||| ||||||| |||||||||||    
T  20242762 tcacataattcagtgtaattatatgtgtcggtgtc--ggacacaacacgtgtctgacacgaggacacgccttatccgaagagtgtctgtgcttcatag 20242667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 300 - 365
Target Start/End: Complemental strand, 21782927 - 21782861
Alignment:
Q  300 ctatgaagcacggatacagacac-ggacacgacacatactctaacacaccgacacagctaataattt 365  Q
    |||||||||||| |||||||||| |||||||||||| || || |||| ||||||| |||||||||||    
T  21782927 ctatgaagcacgaatacagacactggacacgacacaaacactgacacgccgacactgctaataattt 21782861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 413 - 471
Target Start/End: Complemental strand, 34993980 - 34993922
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||  |||||||||| |||||||||||||| | |||||||| ||||||||||||    
T  34993980 acacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgcttcatag 34993922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 435 - 472
Target Start/End: Complemental strand, 10535721 - 10535684
Alignment:
Q  435 ggacacgcctaatccgaggagtgtccgtgcttcataga 472  Q
    |||||||||||||||||||||||| |||||||||||||    
T  10535721 ggacacgcctaatccgaggagtgttcgtgcttcataga 10535684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 416 - 469
Target Start/End: Original strand, 15657939 - 15657992
Alignment:
Q  416 cgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 469  Q
    |||||| |||||||| | |||||||||||| |||||||||||||| ||||||||    
T  15657939 cgacacgtgtccgacgccgggacacgcctagtccgaggagtgtccatgcttcat 15657992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 414 - 471
Target Start/End: Complemental strand, 21782801 - 21782744
Alignment:
Q  414 cacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||| ||||| |||| |||||||| |||||| | ||||||||||||||||||||    
T  21782801 cacgacacgtgtccaacaccgggacacgtctaatctgtggagtgtccgtgcttcatag 21782744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 434 - 471
Target Start/End: Complemental strand, 34221500 - 34221463
Alignment:
Q  434 gggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  34221500 gggacacgcctaatccgaggagtttccgtgcttcatag 34221463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 413 - 470
Target Start/End: Original strand, 44860392 - 44860449
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 470  Q
    ||||||||  |||||||||  ||||||| |||||| ||||||||||||||||||||||    
T  44860392 acacgacatgtgtccgacatcgggacacacctaattcgaggagtgtccgtgcttcata 44860449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 374 - 449
Target Start/End: Original strand, 5367216 - 5367289
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatcc 449  Q
    |||||| |||||||||||||| | |||| ||||||  | ||||||||||| |||||| | ||||||||||||||||    
T  5367216 tcacataattcagtgtaattatatgtgtcggtgtc--ggacacgacacatatccgactccgggacacgcctaatcc 5367289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 423 - 471
Target Start/End: Complemental strand, 18631399 - 18631351
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||| ||||| |||||||||||||| ||||||||||||| |||||||||    
T  18631399 tgtcagacactgggacacgcctaatgcgaggagtgtccgagcttcatag 18631351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 435 - 471
Target Start/End: Complemental strand, 19536397 - 19536361
Alignment:
Q  435 ggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||||||||||||||||||||| ||||||||||    
T  19536397 ggacacgcctaatccgaggagtgtccatgcttcatag 19536361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 434 - 470
Target Start/End: Complemental strand, 23354618 - 23354582
Alignment:
Q  434 gggacacgcctaatccgaggagtgtccgtgcttcata 470  Q
    |||||||||||||||||||||||||||||| ||||||    
T  23354618 gggacacgcctaatccgaggagtgtccgtggttcata 23354582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 97
Target Start/End: Original strand, 26627185 - 26627225
Alignment:
Q  57 gataaaaattgattttgaatgaatctattttgtaaaattga 97  Q
    ||||||| |||||||||||||||| ||||||||||||||||    
T  26627185 gataaaatttgattttgaatgaatttattttgtaaaattga 26627225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 417 - 473
Target Start/End: Original strand, 28412422 - 28412478
Alignment:
Q  417 gacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagat 473  Q
    ||||| |||||||||| |||||||| ||||| ||||||| ||| |||||||||||||    
T  28412422 gacacgtgtccgacactgggacacggctaattcgaggagcgtcagtgcttcatagat 28412478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 469
Target Start/End: Complemental strand, 36756331 - 36756275
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 469  Q
    |||| ||||||||||||||| |  ||||||||||||| ||||||||| |||||||||    
T  36756331 acacaacacatgtccgacaccgcaacacgcctaatcctaggagtgtctgtgcttcat 36756275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 427 - 471
Target Start/End: Original strand, 44635568 - 44635612
Alignment:
Q  427 cgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||| | ||||||||||||| ||||||||||||||||||||||    
T  44635568 cgacaccgagacacgcctaatctgaggagtgtccgtgcttcatag 44635612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 435 - 470
Target Start/End: Complemental strand, 18255980 - 18255945
Alignment:
Q  435 ggacacgcctaatccgaggagtgtccgtgcttcata 470  Q
    ||||||||||||||| ||||||||||||||||||||    
T  18255980 ggacacgcctaatccaaggagtgtccgtgcttcata 18255945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 436 - 471
Target Start/End: Complemental strand, 20539667 - 20539632
Alignment:
Q  436 gacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||| ||||||||||||||||||||||||||    
T  20539667 gacacgcctgatccgaggagtgtccgtgcttcatag 20539632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 434 - 469
Target Start/End: Complemental strand, 23354961 - 23354926
Alignment:
Q  434 gggacacgcctaatccgaggagtgtccgtgcttcat 469  Q
    ||||||||||||||||||||||||||| ||||||||    
T  23354961 gggacacgcctaatccgaggagtgtccttgcttcat 23354926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 413 - 476
Target Start/End: Original strand, 27084330 - 27084393
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagattat 476  Q
    ||||||||| ||||| |||| | ||||||||||||| ||||||||||  |||||||||| ||||    
T  27084330 acacgacacgtgtccaacaccgagacacgcctaatcggaggagtgtctctgcttcatagcttat 27084393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 100
Target Start/End: Original strand, 33502768 - 33502811
Alignment:
Q  58 ataaaaattgattttgaatgaatct-attttgtaaaattgattt 100  Q
    ||||||||||||||||||||||| | ||||||||||||||||||    
T  33502768 ataaaaattgattttgaatgaatttgattttgtaaaattgattt 33502811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 435 - 470
Target Start/End: Complemental strand, 34691805 - 34691770
Alignment:
Q  435 ggacacgcctaatccgaggagtgtccgtgcttcata 470  Q
    ||||||||||||||||||||||||||||| ||||||    
T  34691805 ggacacgcctaatccgaggagtgtccgtgtttcata 34691770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 435 - 470
Target Start/End: Complemental strand, 34714217 - 34714182
Alignment:
Q  435 ggacacgcctaatccgaggagtgtccgtgcttcata 470  Q
    ||||||||||||||||||||||||||||| ||||||    
T  34714217 ggacacgcctaatccgaggagtgtccgtgtttcata 34714182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 434 - 468
Target Start/End: Original strand, 17776680 - 17776714
Alignment:
Q  434 gggacacgcctaatccgaggagtgtccgtgcttca 468  Q
    |||||| ||||||||||||||||||||||||||||    
T  17776680 gggacaggcctaatccgaggagtgtccgtgcttca 17776714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 300 - 365
Target Start/End: Complemental strand, 20539783 - 20539717
Alignment:
Q  300 ctatgaagcacggatacagacac-ggacacgacacatactctaacacaccgacacagctaataattt 365  Q
    ||||||||||||||||| ||||| |||||||||||  || || ||||  ||||||||||||||||||    
T  20539783 ctatgaagcacggatacggacactggacacgacacggacactgacacgtcgacacagctaataattt 20539717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 434 - 472
Target Start/End: Complemental strand, 22084793 - 22084755
Alignment:
Q  434 gggacacgcctaatccgaggagtgtccgtgcttcataga 472  Q
    |||||||||||||||||| ||||||| ||||||||||||    
T  22084793 gggacacgcctaatccgatgagtgtctgtgcttcataga 22084755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 423 - 473
Target Start/End: Complemental strand, 24975303 - 24975253
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagat 473  Q
    |||||||||| ||||||   |||||| ||||||||||||||||||||||||    
T  24975303 tgtccgacactgggacaaatctaatctgaggagtgtccgtgcttcatagat 24975253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 423 - 473
Target Start/End: Complemental strand, 32749802 - 32749752
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagat 473  Q
    |||||||||| ||||||||||| |||  ||||||||||| |||||||||||    
T  32749802 tgtccgacactgggacacgccttatctaaggagtgtccgcgcttcatagat 32749752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 413 - 471
Target Start/End: Complemental strand, 36096362 - 36096304
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||| |||| ||||| ||||||||||| | || | |||||||||||||||||||    
T  36096362 acacgacacgtgtctgacacggggacacgccttaaccaaagagtgtccgtgcttcatag 36096304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 413 - 467
Target Start/End: Complemental strand, 37411242 - 37411188
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttc 467  Q
    ||||||| | |||||||||| |||||||||||| ||||||||||| | |||||||    
T  37411242 acacgacgcgtgtccgacactgggacacgcctagtccgaggagtgcctgtgcttc 37411188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 423 - 469
Target Start/End: Complemental strand, 42832280 - 42832234
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 469  Q
    |||||||| | |||||||||||||||| |||||||||| ||||||||    
T  42832280 tgtccgactccgggacacgcctaatccaaggagtgtccttgcttcat 42832234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 7630576 - 7630539
Alignment:
Q  64 attgattttgaatgaatctattttgtaaaattgatttt 101  Q
    |||||||||||||||||  |||||||||||||||||||    
T  7630576 attgattttgaatgaattgattttgtaaaattgatttt 7630539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 300 - 328
Target Start/End: Complemental strand, 1886985 - 1886957
Alignment:
Q  300 ctatgaagcacggatacagacacggacac 328  Q
    |||||||||||||||||||||||||||||    
T  1886985 ctatgaagcacggatacagacacggacac 1886957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 101
Target Start/End: Complemental strand, 13238976 - 13238936
Alignment:
Q  61 aaaattgattttgaatgaatctattttgtaaaattgatttt 101  Q
    |||||||||||||| |||||  |||||||||||||||||||    
T  13238976 aaaattgattttgattgaattcattttgtaaaattgatttt 13238936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 413 - 470
Target Start/End: Original strand, 35449568 - 35449627
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcct--aatccgaggagtgtccgtgcttcata 470  Q
    ||||||||||||||||||||  | ||||| ||  ||||||||||||||| ||||||||||    
T  35449568 acacgacacatgtccgacaccagaacacgtctctaatccgaggagtgtctgtgcttcata 35449627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 471
Target Start/End: Original strand, 39323321 - 39323357
Alignment:
Q  435 ggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||| |||||||| ||||||||||||||||||||||    
T  39323321 ggacaggcctaatctgaggagtgtccgtgcttcatag 39323357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 2e-29; HSPs: 65)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 342 - 471
Target Start/End: Original strand, 4877935 - 4878061
Alignment:
Q  342 acacaccgacacagctaataatttnnnnnnnntcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacg 441  Q
    ||||||||||||||||||||||||        |||||| ||| ||| ||||||||||||| ||||||  | ||||||||||||||||||||||| |||||    
T  4877935 acacaccgacacagctaataatttgaaaaaagtcacataattaagtataattacaagtgtcggtgtc--ggacacgacacatgtccgacacagg-acacg 4878031  T
Q  442 cctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||||||||||||||||||||||||    
T  4878032 cctaatccgaggagtgtccgtgcttcatag 4878061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 374 - 474
Target Start/End: Original strand, 34595158 - 34595256
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagat 473  Q
    |||||| ||||||||||||||||||||| ||||||  | ||||||||| |||| ||||| ||||||| ||||||||||||||||||||||||||||||||    
T  34595158 tcacataattcagtgtaattacaagtgtcggtgtc--ggacacgacacgtgtctgacaccgggacacacctaatccgaggagtgtccgtgcttcatagat 34595255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 374 - 471
Target Start/End: Original strand, 28152122 - 28152217
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||| ||||||||||||||||||||| ||||||  | ||||||||| |||||||||| |||||| |||||||||||||||||| ||||||||||||    
T  28152122 tcacataattcagtgtaattacaagtgtcggtgtc--ggacacgacacgtgtccgacaccgggacaggcctaatccgaggagtgttcgtgcttcatag 28152217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 302 - 469
Target Start/End: Original strand, 12696277 - 12696446
Alignment:
Q  302 atgaagcacggatacagacacggacacgacacatactctaacacaccgacacagctaataatttnnnnnnnntcacattattcagtgtaattacaagtgt 401  Q
    ||||||||||||||| ||||||||||||||||  || || |||| |||||||||||||||||||        | |||| |||||||||||||||||||||    
T  12696277 atgaagcacggatacggacacggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatt-acataattcagtgtaattacaagtgt 12696375  T
Q  402 tggtgtcttgt---acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 469  Q
      ||||| |||   ||||||||| |||| ||||| ||||||| ||| |||| ||||||||| |||||||||    
T  12696376 cagtgtcgtgtcggacacgacacgtgtctgacaccgggacacaccttatccaaggagtgtctgtgcttcat 12696446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 342 - 468
Target Start/End: Complemental strand, 32978966 - 32978842
Alignment:
Q  342 acacaccgacacagctaataatttnnnnnnnntcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacg 441  Q
    |||| |||||||||||||||||||         ||||| ||| ||||||||||||||||| ||||||  | |||||||||||||||||||| ||||||||    
T  32978966 acacgccgacacagctaataatttgaaaaaaaacacataattaagtgtaattacaagtgtcggtgtc--ggacacgacacatgtccgacaccgggacacg 32978869  T
Q  442 cctaatccgaggagtgtccgtgcttca 468  Q
     ||||||| ||||||||||||||||||    
T  32978868 tctaatccaaggagtgtccgtgcttca 32978842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 300 - 471
Target Start/End: Complemental strand, 8365628 - 8365448
Alignment:
Q  300 ctatgaagcacggatacagacacg-gacacgacacatactctaacacaccgacacagctaataatttnnnnnnnntcacattattcagtgtaattacaag 398  Q
    ||||||||||||||||| |||||  ||||||||||  || || |||| |||||||| ||||||||||        |||||| |||| |||||||||||||    
T  8365628 ctatgaagcacggatacggacaccagacacgacacggacactgacacgccgacacaactaataatttgaaaata-tcacataattcggtgtaattacaag 8365530  T
Q  399 tgttggtgtcttgt---------acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||| |||||| |||         ||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  8365529 tgtcggtgtcgtgtcggtatcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtctccgtgcttcatag 8365448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 413 - 471
Target Start/End: Complemental strand, 10339112 - 10339054
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  10339112 acacgacacatgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 10339054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 413 - 471
Target Start/End: Complemental strand, 17327648 - 17327590
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  17327648 acacgacacgtgtctgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 17327590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 374 - 470
Target Start/End: Complemental strand, 17841624 - 17841530
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 470  Q
    |||||| ||| ||||||||||||||||  ||||||  | ||||||||  |||||||||| | |||||||||||||||||||||||||||||||||||    
T  17841624 tcacataatttagtgtaattacaagtgacggtgtc--ggacacgacatgtgtccgacactgagacacgcctaatccgaggagtgtccgtgcttcata 17841530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 296 - 471
Target Start/End: Complemental strand, 8777092 - 8776908
Alignment:
Q  296 atatctatgaagcacggatacagacacggaca-------cgacacatactctaacacaccgacacagctaataatttnnnnnnnntcacattattcagtg 388  Q
    ||||||||||||||||||||| ||||||||||       ||||||  || || |||| |||||||| ||||||||||        |||||  ||||||||    
T  8777092 atatctatgaagcacggatacggacacggacaacggacacgacacggacactgacacgccgacacaactaataatttgaaaaaa-tcacaaaattcagtg 8776994  T
Q  389 taattacaagtgttggtgtcttgtac---acgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||||||||||||||    ||   ||||||| |||||||||| | ||||| ||||||||||||||||||||||||||||||    
T  8776993 taattacaagtgttggtgtcggacacgacacgacacgtgtccgacaccgagacacacctaatccgaggagtgtccgtgcttcatag 8776908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 376 - 471
Target Start/End: Original strand, 28715321 - 28715414
Alignment:
Q  376 acattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||| ||||||||||||||||||||| ||||||  | ||||||||| ||| |||||| |||||||||||||| |||| ||||| ||||||||||||    
T  28715321 acataattcagtgtaattacaagtgtcggtgtc--ggacacgacacgtgttcgacaccgggacacgcctaattcgagaagtgtacgtgcttcatag 28715414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 302 - 470
Target Start/End: Original strand, 9658832 - 9658998
Alignment:
Q  302 atgaagcacggatacagacacggacacgacacatactctaacacaccgacacagctaataatttnnnnnnnntcacattattcagtgtaattacaagtgt 401  Q
    ||||||||||||||||||||| ||||||||||  || || |||| ||||||| |||||||||||        |||||| |||||||||||||| |  |||    
T  9658832 atgaagcacggatacagacacagacacgacacggacactgacacgccgacaccgctaataattt-aagaaaatcacataattcagtgtaattatatttgt 9658930  T
Q  402 tggtgtcttgtacacgacacatgtccgacacagggacacgcctaa-tccgaggagtgtccgtgcttcata 470  Q
     ||||  ||  ||||||||| |||| ||||| || |||||||||| ||| ||||||||||||||||||||    
T  9658931 cggtg--ttagacacgacacgtgtctgacaccggaacacgcctaattccaaggagtgtccgtgcttcata 9658998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 374 - 471
Target Start/End: Complemental strand, 10770709 - 10770607
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgt---acacgacaca--tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttca 468  Q
    |||||| ||||||||||||||||||||| |||||| |||   ||||||||||  |||||||  | |||||| |||||||| |||||||||||||||||||    
T  10770709 tcacataattcagtgtaattacaagtgtcggtgtcgtgtcagacacgacacacgtgtccgatgccgggacatgcctaatctgaggagtgtccgtgcttca 10770610  T
Q  469 tag 471  Q
    |||    
T  10770609 tag 10770607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 374 - 470
Target Start/End: Original strand, 31384944 - 31385048
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgta--------cacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgct 465  Q
    |||||| |||||||||||||||||||||  ||||| ||||        |||||||| ||||| |||| |||||||||||||||| |||||||||||||||    
T  31384944 tcacataattcagtgtaattacaagtgtcagtgtcgtgtagtgttggacacgacacgtgtcctacaccgggacacgcctaatccaaggagtgtccgtgct 31385043  T
Q  466 tcata 470  Q
    |||||    
T  31385044 tcata 31385048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 374 - 471
Target Start/End: Original strand, 16766721 - 16766827
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgt---------acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgc 464  Q
    |||||| ||||||||||||||||||||| |||||| |||         |||| |||| |||||||||| |||||||||||||||||| || |||||||||    
T  16766721 tcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacaacacgtgtccgacaccgggacacgcctaatccgaagaatgtccgtgc 16766820  T
Q  465 ttcatag 471  Q
    |||||||    
T  16766821 ttcatag 16766827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 413 - 471
Target Start/End: Original strand, 18367908 - 18367966
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||||||||| ||||| ||||||||||| |||| |||||||||||||||||||||    
T  18367908 acacgacacatgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 18367966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 301 - 470
Target Start/End: Original strand, 31959111 - 31959268
Alignment:
Q  301 tatgaagcacggatacagacacggacacgacacatactctaacacaccgacacagctaataatttnnnnnnnntcacattattcagtgtaattacaagtg 400  Q
    |||||||||||||||| |||||||||| |||||  || || |||| ||| |||||||||||||||        |||||| || |||||||||||||||||    
T  31959111 tatgaagcacggatacggacacggacatgacacgaacactgacacgccgtcacagctaataatttgaaaaaa-tcacataatgcagtgtaattacaagtg 31959209  T
Q  401 ttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 470  Q
    | ||           |||||  |||||||||| ||||||| |||||||||||||||||||||||||||||    
T  31959210 tcgg-----------cgacatgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 31959268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 374 - 471
Target Start/End: Complemental strand, 32511701 - 32511606
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||| |||||||||||||| |||||||||||||  | | |||||| ||||| ||||  ||  ||||||||||| ||||||||||||||||||||||    
T  32511701 tcacataattcagtgtaattataagtgttggtgtc--ggatacgacatatgtctgacatcggagcacgcctaatcggaggagtgtccgtgcttcatag 32511606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 300 - 458
Target Start/End: Original strand, 3398569 - 3398729
Alignment:
Q  300 ctatgaagcacggatacagaca-cggacacgacacatactctaacacaccgacacagctaataatttnnnnnnnntcacattattcagtgtaattacaag 398  Q
    |||||||||| |||||| |||| || |||||||||  || || |||| |||||||||||||||||||        ||| || |||||||||||||| |||    
T  3398569 ctatgaagcatggatacggacatcgaacacgacacggacactgacacgccgacacagctaataatttgaaaaa--tcatataattcagtgtaattataag 3398666  T
Q  399 tgttggtgtcttgt---acacgacacatgtccgacacagggacacgcctaatccgaggagtgt 458  Q
    | | |||||| |||   |||||||||||||||||||| || ||||| |||||| |||||||||    
T  3398667 tatcggtgtcgtgttggacacgacacatgtccgacaccggaacacgtctaatcagaggagtgt 3398729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 322 - 473
Target Start/End: Complemental strand, 9107456 - 9107297
Alignment:
Q  322 cggacacgacacatactctaacacaccgacacagctaataatttnnnnnnnntcacattattcagtgtaattacaagtgttggtgtcttgt--------- 412  Q
    ||||||||||||  || ||||||| |||||||||||||||||||        |||||  ||||||||||||||||||||| |||||| |||             
T  9107456 cggacacgacacggacactaacacgccgacacagctaataatttgaaaaaa-tcacaaaattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcgg 9107358  T
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagat 473  Q
    |||| ||   |||||||||| ||||||| |||||||||||||||| |||||||||||||||    
T  9107357 acacaacgtgtgtccgacaccgggacacacctaatccgaggagtgcccgtgcttcatagat 9107297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 321 - 471
Target Start/End: Original strand, 16833280 - 16833427
Alignment:
Q  321 acggacacgacacatactctaacacaccgacacagctaataatttnnnnnnnntcacattattcagtgtaattacaagtgttggtgtcttgtacacgaca 420  Q
    |||||||||||||| || || |||| |||||||| ||||||||||        ||||||  |||||||||||||||||||| |||||  |  ||||||||    
T  16833280 acggacacgacacagacactgacacgccgacacaactaataatttgaaaaaa-tcacatacttcagtgtaattacaagtgtcggtgt--tagacacgaca 16833376  T
Q  421 catgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |  |||||||||  |||||| || ||||||||||||||| || ||||||||    
T  16833377 cgcgtccgacaccaggacacaccgaatccgaggagtgtctgtacttcatag 16833427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 423 - 468
Target Start/End: Complemental strand, 8389456 - 8389411
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttca 468  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||    
T  8389456 tgtccgacaccgggacacacctaatccgaggagtgtccgtgcttca 8389411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 423 - 468
Target Start/End: Complemental strand, 9025493 - 9025448
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttca 468  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||    
T  9025493 tgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttca 9025448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 422 - 471
Target Start/End: Complemental strand, 13360362 - 13360313
Alignment:
Q  422 atgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||||| | |||||||||||||||| |||||||||||||||||||    
T  13360362 atgtccgacactgagacacgcctaatccgaagagtgtccgtgcttcatag 13360313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 423 - 471
Target Start/End: Original strand, 7248440 - 7248488
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||||| |||||||| | |||||||||||||||||||||||||||    
T  7248440 tgtccgacaccgggacacgtcaaatccgaggagtgtccgtgcttcatag 7248488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 374 - 469
Target Start/End: Complemental strand, 7265628 - 7265535
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 469  Q
    |||||| |||||||||||||| | |||| ||||||  | |||| | ||||||||||||| || | | ||||||||||||||| |||||||||||||    
T  7265628 tcacataattcagtgtaattatatgtgtcggtgtc--ggacacaatacatgtccgacaccggaatatgcctaatccgaggagcgtccgtgcttcat 7265535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 423 - 471
Target Start/End: Original strand, 7938171 - 7938219
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||||| | ||||||||| ||||||||||||||||||||||||||    
T  7938171 tgtccgacaccgagacacgcctgatccgaggagtgtccgtgcttcatag 7938219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 376 - 471
Target Start/End: Complemental strand, 7977863 - 7977770
Alignment:
Q  376 acattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||| ||||||||||||||||||||| ||||||  | |||| ||| ||||||||||  |  ||||||||||||  |||||||| ||||||||||||    
T  7977863 acataattcagtgtaattacaagtgtcggtgtc--ggacacaacatatgtccgacaacgaaacacgcctaatctaaggagtgttcgtgcttcatag 7977770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 413 - 473
Target Start/End: Original strand, 8714052 - 8714112
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagat 473  Q
    ||||||||||| |||||||  |||||||||| |||||||||||||||  ||||||||||||    
T  8714052 acacgacacatttccgacatcgggacacgcccaatccgaggagtgtctttgcttcatagat 8714112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 471
Target Start/End: Original strand, 24645479 - 24645600
Alignment:
Q  348 cgacacagctaataatttnnnnnnnntcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaat 447  Q
    ||||||||||||||||||        |||||| ||||||| || |||||||||| ||||||    ||||||||| ||||||||||   |||||| |||||    
T  24645479 cgacacagctaataatttgaaaaaaatcacataattcagtatagttacaagtgtcggtgtcag--acacgacacgtgtccgacaccaagacacgtctaat 24645576  T
Q  448 ccgaggagtgtccgtgcttcatag 471  Q
    |||| ||||||| |||||||||||    
T  24645577 ccgaagagtgtctgtgcttcatag 24645600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 423 - 471
Target Start/End: Complemental strand, 34895016 - 34894968
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  34895016 tgtccgacacagggacacacctaatatgaggagtgtccgtgcttcatag 34894968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 413 - 472
Target Start/End: Original strand, 3209460 - 3209519
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcataga 472  Q
    |||||||||  |||||||||  ||||||||||||||||||||||||  ||||||||||||    
T  3209460 acacgacacgcgtccgacacccggacacgcctaatccgaggagtgtttgtgcttcataga 3209519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 437 - 471
Target Start/End: Complemental strand, 7723233 - 7723199
Alignment:
Q  437 acacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||||||||||||||||||||||||||||||    
T  7723233 acacgcctaatccgaggagtgtccgtgcttcatag 7723199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 436 - 474
Target Start/End: Original strand, 10842617 - 10842655
Alignment:
Q  436 gacacgcctaatccgaggagtgtccgtgcttcatagatt 474  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  10842617 gacacggctaatccgaggagtgtccgtgcttcatagatt 10842655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 434 - 471
Target Start/End: Complemental strand, 8805561 - 8805524
Alignment:
Q  434 gggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||| |||||||||||||||||||||||||||||||    
T  8805561 gggacatgcctaatccgaggagtgtccgtgcttcatag 8805524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 435 - 471
Target Start/End: Complemental strand, 426514 - 426478
Alignment:
Q  435 ggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||||||||| ||||||||||||||||||||||    
T  426514 ggacacgcctaatctgaggagtgtccgtgcttcatag 426478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 469
Target Start/End: Complemental strand, 5000613 - 5000557
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 469  Q
    ||||||||||| ||||||||  ||||||| ||||||||| |||||| ||||||||||    
T  5000613 acacgacacatatccgacaccaggacacgtctaatccgaagagtgttcgtgcttcat 5000557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 435 - 471
Target Start/End: Complemental strand, 5732510 - 5732474
Alignment:
Q  435 ggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||||||||||||||||||||| ||||||||||    
T  5732510 ggacacgcctaatccgaggagtgtccatgcttcatag 5732474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 473
Target Start/End: Complemental strand, 5970095 - 5970035
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagat 473  Q
    ||||||||||| |||||||  |||||||||| ||||||||||||| |  ||||||||||||    
T  5970095 acacgacacatttccgacatcgggacacgcccaatccgaggagtgactatgcttcatagat 5970035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 471
Target Start/End: Complemental strand, 6898314 - 6898221
Alignment:
Q  376 acattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||| ||| ||||||||||||||||| ||||||  | ||||||  | ||||| |||| |  ||||||||||||||| |||||| ||||||||||||    
T  6898314 acataattaagtgtaattacaagtgtcggtgtc--ggacacgaagcgtgtccaacaccgaaacacgcctaatccgatgagtgttcgtgcttcatag 6898221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 423 - 471
Target Start/End: Original strand, 9629465 - 9629513
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||||| | |||||| |||||||||||||||||| ||||||||||    
T  9629465 tgtccgacactgagacacgtctaatccgaggagtgtccatgcttcatag 9629513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 435 - 471
Target Start/End: Original strand, 10649371 - 10649407
Alignment:
Q  435 ggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||||||||| |||||||||||||||||||||    
T  10649371 ggacacgcctaatccaaggagtgtccgtgcttcatag 10649407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 471
Target Start/End: Complemental strand, 12868668 - 12868616
Alignment:
Q  419 cacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||||||||| || |||||||||||||||  |||||| |||||||||||    
T  12868668 cacatgtccgacacgggaacacgcctaatccgataagtgtcggtgcttcatag 12868616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 425 - 472
Target Start/End: Original strand, 7378052 - 7378099
Alignment:
Q  425 tccgacacagggacacgcctaatccgaggagtgtccgtgcttcataga 472  Q
    |||||||| |||||||| |||||| ||| |||||||||||||||||||    
T  7378052 tccgacaccgggacacggctaatctgagaagtgtccgtgcttcataga 7378099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 471
Target Start/End: Original strand, 12236723 - 12236778
Alignment:
Q  416 cgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||||| || ||| ||||||||||||| | ||||||||| ||||||||||||    
T  12236723 cgacacatgttcggcaccgggacacgcctaacctgaggagtgttcgtgcttcatag 12236778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 428 - 471
Target Start/End: Original strand, 34446647 - 34446690
Alignment:
Q  428 gacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||| ||||||| |||||||| |||||||||||||||||||||    
T  34446647 gacactgggacacacctaatccaaggagtgtccgtgcttcatag 34446690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 60 - 146
Target Start/End: Complemental strand, 1500075 - 1499989
Alignment:
Q  60 aaaaattgattttgaatgaatctattttgtaaaattgatttttacttaaaatgacccgaatgtaaaatgatttatgtttgaacacat 146  Q
    ||||||||||||||| |||||  |||||||||||||||||||  || |||  ||   || |||||| ||||||||||||||| ||||    
T  1500075 aaaaattgattttgactgaattgattttgtaaaattgattttggctaaaagcgagttgagtgtaaattgatttatgtttgaatacat 1499989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 300 - 365
Target Start/End: Original strand, 1681702 - 1681774
Alignment:
Q  300 ctatgaagcacggatacagacacggacac-------gacacatactctaacacaccgacacagctaataattt 365  Q
    ||||||||||||||||||||||| |||||       ||||||||| ||||||| |||||||| ||||||||||    
T  1681702 ctatgaagcacggatacagacacagacaccgaacacgacacatacactaacacgccgacacaactaataattt 1681774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 437 - 483
Target Start/End: Original strand, 5569834 - 5569880
Alignment:
Q  437 acacgcctaatccgaggagtgtccgtgcttcatagattattatgagt 483  Q
    |||||||||||| |||||||||||||||||||| |||| | ||||||    
T  5569834 acacgcctaatctgaggagtgtccgtgcttcatcgattttcatgagt 5569880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 425 - 471
Target Start/End: Original strand, 6389806 - 6389851
Alignment:
Q  425 tccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||| ||||||| ||||||||||| ||||||||||||||||||    
T  6389806 tccgacac-gggacactcctaatccgagaagtgtccgtgcttcatag 6389851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 423 - 473
Target Start/End: Original strand, 7625187 - 7625237
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagat 473  Q
    |||||||||| || |||||| |||||| |||||||| ||||||||||||||    
T  7625187 tgtccgacaccggaacacgcttaatccaaggagtgttcgtgcttcatagat 7625237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 60 - 110
Target Start/End: Original strand, 13428857 - 13428907
Alignment:
Q  60 aaaaattgattttgaatgaatctattttgtaaaattgatttttacttaaaa 110  Q
    ||||||||||| ||||| |||  ||||||||||||||||||||| ||||||    
T  13428857 aaaaattgattgtgaataaatgaattttgtaaaattgatttttagttaaaa 13428907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 101
Target Start/End: Original strand, 2915143 - 2915184
Alignment:
Q  60 aaaaattgattttgaatgaatctattttgtaaaattgatttt 101  Q
    ||||||||||||||||||||| |||||| ||||||| |||||    
T  2915143 aaaaattgattttgaatgaatatattttctaaaattcatttt 2915184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 435 - 472
Target Start/End: Complemental strand, 9911518 - 9911481
Alignment:
Q  435 ggacacgcctaatccgaggagtgtccgtgcttcataga 472  Q
    |||||||||||||||||||||||| | |||||||||||    
T  9911518 ggacacgcctaatccgaggagtgttcatgcttcataga 9911481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 466
Target Start/End: Original strand, 24138496 - 24138545
Alignment:
Q  417 gacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgctt 466  Q
    ||||| |||| ||||||| |||| ||||||||||| ||||||||||||||    
T  24138496 gacacgtgtctgacacagagacatgcctaatccgaagagtgtccgtgctt 24138545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 421 - 470
Target Start/End: Original strand, 24807113 - 24807162
Alignment:
Q  421 catgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 470  Q
    |||||||||| | ||| ||| |||||||||||||||||| ||||||||||    
T  24807113 catgtccgacgctggggcacacctaatccgaggagtgtcagtgcttcata 24807162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 428 - 469
Target Start/End: Complemental strand, 26178661 - 26178620
Alignment:
Q  428 gacacagggacacgcctaatccgaggagtgtccgtgcttcat 469  Q
    ||||| ||||||||||||||| |||||||||| |||||||||    
T  26178661 gacaccgggacacgcctaatcggaggagtgtctgtgcttcat 26178620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 475
Target Start/End: Original strand, 28648365 - 28648406
Alignment:
Q  434 gggacacgcctaatccgaggagtgtccgtgcttcatagatta 475  Q
    |||||||||||||||||| |||||||| |||| |||||||||    
T  28648365 gggacacgcctaatccgatgagtgtccttgctccatagatta 28648406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 471
Target Start/End: Complemental strand, 32839608 - 32839571
Alignment:
Q  434 gggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||||||||||||| |||||| |||||||||||    
T  32839608 gggacacgcctaatccgagaagtgtctgtgcttcatag 32839571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 426 - 471
Target Start/End: Complemental strand, 34073323 - 34073278
Alignment:
Q  426 ccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||| |||||||  ||||| |||||||||||||||||||||||    
T  34073323 ccgacaccgggacacctctaattcgaggagtgtccgtgcttcatag 34073278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 471
Target Start/End: Original strand, 2117139 - 2117175
Alignment:
Q  435 ggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||| |||||||| ||||||||||||||||||||||    
T  2117139 ggacatgcctaatcggaggagtgtccgtgcttcatag 2117175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 416 - 468
Target Start/End: Complemental strand, 7996377 - 7996325
Alignment:
Q  416 cgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttca 468  Q
    |||||| ||||  |||| |||||||||||||||| |||||| |||||||||||    
T  7996377 cgacacgtgtctaacacggggacacgcctaatccaaggagtctccgtgcttca 7996325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 416 - 468
Target Start/End: Original strand, 8022424 - 8022476
Alignment:
Q  416 cgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttca 468  Q
    |||||| ||||  |||| |||||||||||||||| |||||| |||||||||||    
T  8022424 cgacacgtgtctaacacggggacacgcctaatccaaggagtctccgtgcttca 8022476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 471
Target Start/End: Original strand, 9027238 - 9027286
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||||| |||||||| ||||||| ||||||||  |||||||||||    
T  9027238 tgtccgacaccgggacacggctaatccaaggagtgtttgtgcttcatag 9027286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 296 - 328
Target Start/End: Complemental strand, 34225920 - 34225888
Alignment:
Q  296 atatctatgaagcacggatacagacacggacac 328  Q
    ||||||||||||||||||||| |||||||||||    
T  34225920 atatctatgaagcacggatacggacacggacac 34225888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 63; Significance: 4e-27; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 374 - 471
Target Start/End: Complemental strand, 5409871 - 5409771
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgt---acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 470  Q
    |||||| |||||||| |||||||||||| |||||| |||   ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  5409871 tcacataattcagtgcaattacaagtgtcggtgtcgtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcata 5409772  T
Q  471 g 471  Q
    |    
T  5409771 g 5409771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 376 - 472
Target Start/End: Original strand, 21880178 - 21880272
Alignment:
Q  376 acattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcataga 472  Q
    |||| ||||||||||||||||||||| ||||||  | ||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||    
T  21880178 acataattcagtgtaattacaagtgtcggtgtc--ggacacgacacatgtccgacaccaggacacgcctaatccgagaagtgtccgtgcttcataga 21880272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 300 - 471
Target Start/End: Complemental strand, 32094130 - 32093954
Alignment:
Q  300 ctatgaagcacggatacagacacg-gacacgacacatactctaacacaccgacacagctaataatttnnnnnnnntcacattattcagtgtaattacaag 398  Q
    ||||| ||||||||||| |||||  ||||||||||| || ||||||  || ||||| ||||||||||        |||||| |||||||||||||||||     
T  32094130 ctatggagcacggatacggacacaagacacgacacaaacactaacatgccaacacaactaataatttgaaaaaaatcacataattcagtgtaattacaaa 32094031  T
Q  399 tgttggtgtcttgt---acacgacacatgtccgacacaggg-acacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||| |||||| |||   ||||||||| |||||||||| ||| |||||||||||||||||||||| ||||||||||||    
T  32094030 tgtcggtgtcgtgtcggacacgacacgtgtccgacaccggggacacgcctaatccgaggagtgttcgtgcttcatag 32093954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 300 - 471
Target Start/End: Complemental strand, 43027578 - 43027404
Alignment:
Q  300 ctatgaagcacggatacagacac-ggacacgacacatactctaacacaccgacacagctaataatttnnnnnnnntcacattattcagtgtaattacaag 398  Q
    ||||||||||||||| | ||||| |||||||||||  || || ||||  |||| |||||||||||||        |||||| || |||||||| ||||||    
T  43027578 ctatgaagcacggatgcggacactggacacgacacggacactgacacggcgacccagctaataatttgaaaaaa-tcacataatgcagtgtaaatacaag 43027480  T
Q  399 tgttggtgtcttgt---acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||| |||||| |||   ||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||||    
T  43027479 tgtcggtgtcgtgtcagacacgacacgtgtccgacaccgggacacgcctaatccgatgagtgtccgtgcttcatag 43027404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 374 - 476
Target Start/End: Original strand, 9778524 - 9778629
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgt---acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 470  Q
    |||||| ||||||| ||||||||||||| |||||| |||   |||| |||| |||||||||| |||||||||||||||| ||||||||||||||||||||    
T  9778524 tcacataattcagtataattacaagtgtcggtgtcgtgtcggacacaacacgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgcttcata 9778623  T
Q  471 gattat 476  Q
    | ||||    
T  9778624 ggttat 9778629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 300 - 471
Target Start/End: Original strand, 21864756 - 21864927
Alignment:
Q  300 ctatgaagcacggatacagaca-cggacacgacacatactctaacacaccgacacagctaataatttnnnnnnnn-tcacattattcagtgtaattacaa 397  Q
    |||||||||||||||||| ||| ||||||||||||  || |  |||||| |||||||||||||||||         ||| || ||| |||||||||||||    
T  21864756 ctatgaagcacggatacacacatcggacacgacacggacacggacacacggacacagctaataatttgaaaaaaaatcatataatttagtgtaattacaa 21864855  T
Q  398 gtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||| | ||||  | ||||||||| |||||||||| |||||||| ||||| ||||||||||| |||||||||||    
T  21864856 gtgtcgctgtc--ggacacgacacgtgtccgacaccgggacacgtctaattcgaggagtgtctgtgcttcatag 21864927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 299 - 471
Target Start/End: Original strand, 24105628 - 24105797
Alignment:
Q  299 tctatgaagcacggatacagacacggacacgacacatactctaacacaccgacacagctaataatttnnnnnnnntcacattattcagtgtaattacaag 398  Q
    |||||||||||||||||| || |||||||||||||  || || |||| |||||||||||||||||||        |  ||| ||||||||||||||||||    
T  24105628 tctatgaagcacggatacggatacggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatt-gcatgattcagtgtaattacaag 24105726  T
Q  399 tgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||| || |||  |  ||| |||  |||||||||| ||||||||||||| |||||||||||  |||||||||||    
T  24105727 tgtcggagtc--gggcacaacatgtgtccgacaccgggacacgcctaacccgaggagtgtttgtgcttcatag 24105797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 374 - 474
Target Start/End: Original strand, 24339666 - 24339775
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgt---------acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgc 464  Q
    |||||| ||||||||||||||||||||| |||||| |||         ||||||||| | |||||||| |||||||||||||||||||||||| ||||||    
T  24339666 tcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacgtatccgacaccgggacacgcctaatccgaggagtgcccgtgc 24339765  T
Q  465 ttcatagatt 474  Q
    ||||||||||    
T  24339766 ttcatagatt 24339775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 413 - 471
Target Start/End: Original strand, 598269 - 598327
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  598269 acacgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatag 598327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 374 - 471
Target Start/End: Original strand, 15680833 - 15680928
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||| ||| |||||||||| |||||| ||||||  | ||||||||| |||||||||| | |||||| ||||| |||||||||||||||||||||||    
T  15680833 tcacataatttagtgtaattataagtgtcggtgtc--ggacacgacacgtgtccgacaccgagacacgtctaattcgaggagtgtccgtgcttcatag 15680928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 329 - 470
Target Start/End: Original strand, 20549771 - 20549909
Alignment:
Q  329 gacacatactctaacacaccgacacagctaataatttnnnnnnnntcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccg 428  Q
    ||||||||| || |||||||||||| |||||||||||        |||| | |||||||||||||| | |||| ||||||  | |||| |||||||||||    
T  20549771 gacacatacactgacacaccgacaccgctaataatttgagaaaa-tcacgtaattcagtgtaattatatgtgtcggtgtc--ggacacaacacatgtccg 20549867  T
Q  429 acacagggacacgcctaatccgaggagtgtccgtgcttcata 470  Q
    |||  | |||||||||||||||||||||| ||||||||||||    
T  20549868 acaatgagacacgcctaatccgaggagtgcccgtgcttcata 20549909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 376 - 466
Target Start/End: Original strand, 13770717 - 13770810
Alignment:
Q  376 acattattcagtgtaattacaagtgttggtgtcttgt---acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgctt 466  Q
    |||| ||||||||||||||||||||| | |||| |||   |||| |||| |||||||||| || ||||||||||||||| ||||||||||||||    
T  13770717 acataattcagtgtaattacaagtgtcgttgtcgtgtcggacacaacacgtgtccgacaccggaacacgcctaatccgaagagtgtccgtgctt 13770810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 413 - 471
Target Start/End: Complemental strand, 29763187 - 29763129
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||| |||||||||   |||||||||||||||||||||||||||||||||||||    
T  29763187 acacgacacgtgtccgacatcaggacacgcctaatccgaggagtgtccgtgcttcatag 29763129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 374 - 471
Target Start/End: Original strand, 33994236 - 33994331
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||| |||||||| |||||||||||| ||||||    ||||||||||||||| |||| | |||||||||||||| |||||||| |||| |||||||    
T  33994236 tcacataattcagtgcaattacaagtgtcggtgtcag--acacgacacatgtccaacaccgagacacgcctaatccaaggagtgttcgtgtttcatag 33994331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 417 - 467
Target Start/End: Complemental strand, 40287356 - 40287306
Alignment:
Q  417 gacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttc 467  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  40287356 gacacatgtccgacaccgggacatgcctaatccgaggagtgtccgtgcttc 40287306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 374 - 471
Target Start/End: Original strand, 2334274 - 2334379
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgt--------acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgct 465  Q
    |||||| ||| ||||||||||||||||| |||||| |||        |||||||||||||||||||| |  ||||| ||||||||||||||||||||| |    
T  2334274 tcacataatttagtgtaattacaagtgtcggtgtcgtgtcgtgtcggacacgacacatgtccgacactgaaacacgtctaatccgaggagtgtccgtgtt 2334373  T
Q  466 tcatag 471  Q
    ||||||    
T  2334374 tcatag 2334379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 423 - 471
Target Start/End: Original strand, 6490787 - 6490835
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  6490787 tgtccgacaccgggacacgcttaatccgaggagtgtccgtgcttcatag 6490835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 423 - 471
Target Start/End: Complemental strand, 40131987 - 40131939
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  40131987 tgtccgacacagggacacgtctaatccgaggagtgtctgtgcttcatag 40131939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 411 - 470
Target Start/End: Complemental strand, 20545244 - 20545185
Alignment:
Q  411 gtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 470  Q
    |||||||||||||||||||||| ||||||||  |||| ||||||||||| ||||||||||    
T  20545244 gtacacgacacatgtccgacacggggacacgtttaattcgaggagtgtctgtgcttcata 20545185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 423 - 470
Target Start/End: Complemental strand, 32287451 - 32287404
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 470  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||    
T  32287451 tgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 32287404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 413 - 471
Target Start/End: Original strand, 7438778 - 7438836
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||||||| ||||||  ||||||||||||| | |||||||||||||||||||||    
T  7438778 acacgacacatgtgcgacactaggacacgcctaattcaaggagtgtccgtgcttcatag 7438836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 423 - 471
Target Start/End: Original strand, 1433530 - 1433578
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||||  ||||||| |||||||||||||||||||||||||||||    
T  1433530 tgtccgacaccaggacacgtctaatccgaggagtgtccgtgcttcatag 1433578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 423 - 471
Target Start/End: Original strand, 14729774 - 14729822
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||||| ||||||||| ||||||||||||||||||| ||||||||    
T  14729774 tgtccgacaccgggacacgcttaatccgaggagtgtccgtacttcatag 14729822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 435 - 471
Target Start/End: Original strand, 35862034 - 35862070
Alignment:
Q  435 ggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||||||||||||||||||||||||||||||||    
T  35862034 ggacacgcctaatccgaggagtgtccgtgcttcatag 35862070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 301 - 365
Target Start/End: Original strand, 49107773 - 49107837
Alignment:
Q  301 tatgaagcacggatacagacacggacacgacacatactctaacacaccgacacagctaataattt 365  Q
    |||||| ||||||||| |||| |||||||||||  ||||| |||||||||||| |||||||||||    
T  49107773 tatgaaacacggatacggacaaggacacgacacggactctgacacaccgacaccgctaataattt 49107837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 381 - 470
Target Start/End: Complemental strand, 7197325 - 7197238
Alignment:
Q  381 attcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 470  Q
    ||||| ||||||||||||||| ||||||  | |||| ||||||||||||||| |||| || | || |||||| | |||||||||||||||    
T  7197325 attcaatgtaattacaagtgtcggtgtc--ggacacaacacatgtccgacaccgggatactcttattccgagaaatgtccgtgcttcata 7197238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 376 - 449
Target Start/End: Original strand, 8234172 - 8234243
Alignment:
Q  376 acattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatcc 449  Q
    |||| |||||||||| |||||||||  ||||||  | |||||||||||||||||||| | ||||||||||||||    
T  8234172 acataattcagtgtagttacaagtgccggtgtc--ggacacgacacatgtccgacaccgagacacgcctaatcc 8234243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 417 - 471
Target Start/End: Original strand, 17852065 - 17852119
Alignment:
Q  417 gacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||| |||||||||| | ||||| |||||| |||||||||||||||||||||||    
T  17852065 gacacgtgtccgacaccgagacacacctaattcgaggagtgtccgtgcttcatag 17852119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 374 - 471
Target Start/End: Complemental strand, 18213068 - 18212973
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||| ||| |||||||||| | |||| ||||||  | ||||||| | | || ||||| ||||||||||| |||||||||||||| |||||||||||    
T  18213068 tcacataatttagtgtaattatatgtgtcggtgtc--ggacacgacccctttctgacacggggacacgccttatccgaggagtgtctgtgcttcatag 18212973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 437 - 471
Target Start/End: Original strand, 30813882 - 30813916
Alignment:
Q  437 acacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||||||||||||||||||||||||||||||    
T  30813882 acacgcctaatccgaggagtgtccgtgcttcatag 30813916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 434 - 471
Target Start/End: Original strand, 3991395 - 3991432
Alignment:
Q  434 gggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||||||||||||||||||||||| |||||||||    
T  3991395 gggacacgcctaatccgaggagtgtccgggcttcatag 3991432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 427 - 468
Target Start/End: Complemental strand, 8842323 - 8842282
Alignment:
Q  427 cgacacagggacacgcctaatccgaggagtgtccgtgcttca 468  Q
    |||||| |||||||||||||||| ||||||||||||||||||    
T  8842323 cgacaccgggacacgcctaatccaaggagtgtccgtgcttca 8842282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 417 - 470
Target Start/End: Complemental strand, 18035858 - 18035806
Alignment:
Q  417 gacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 470  Q
    |||||||||| ||||| || ||||| ||||||||||||||||||||||||||||    
T  18035858 gacacatgtctgacac-ggaacacgtctaatccgaggagtgtccgtgcttcata 18035806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 423 - 464
Target Start/End: Complemental strand, 18215185 - 18215144
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgc 464  Q
    |||||||||| ||||||||||||||| |||||||||||||||    
T  18215185 tgtccgacaccgggacacgcctaatctgaggagtgtccgtgc 18215144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 296 - 473
Target Start/End: Original strand, 25481842 - 25482023
Alignment:
Q  296 atatctatgaagcacggatacagacacggacac--gacacat-----actctaacacaccgacacagctaataatttnnnnnnnntcacattattcagtg 388  Q
    ||||||||||||||||||||||||||||||||   ||||||      ||  | |||| |||||||||||||||||||        |||||| ||||||||    
T  25481842 atatctatgaagcacggatacagacacggacatcggacacaacatggacaatgacacgccgacacagctaataatttgaaaaaa-tcacataattcagtg 25481940  T
Q  389 taattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagat 473  Q
    ||||||||||||||||||||  | |||||| |  |||||||||  |  |||||| |||| | | |||| ||||||||||||||||    
T  25481941 taattacaagtgttggtgtc--ggacacgatatgtgtccgacattgaaacacgcttaattcaaagagtatccgtgcttcatagat 25482023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 434 - 471
Target Start/End: Complemental strand, 28973918 - 28973881
Alignment:
Q  434 gggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||||||||||||||| |||||||||||||||||    
T  28973918 gggacacgcctaatccgaggtgtgtccgtgcttcatag 28973881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 434 - 471
Target Start/End: Complemental strand, 29812635 - 29812598
Alignment:
Q  434 gggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  29812635 gggacacgcctaatccgagaagtgtccgtgcttcatag 29812598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 413 - 470
Target Start/End: Original strand, 32308192 - 32308249
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 470  Q
    |||||||||||||||||||| | |||||  |||||||||||||||| | |||||||||    
T  32308192 acacgacacatgtccgacaccgagacacagctaatccgaggagtgttcatgcttcata 32308249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 423 - 471
Target Start/End: Complemental strand, 7133260 - 7133212
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||||| ||||||| ||||||| |||||| |||||||||||||||    
T  7133260 tgtccgacactgggacacacctaatctgaggagcgtccgtgcttcatag 7133212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 420 - 471
Target Start/End: Original strand, 1401091 - 1401142
Alignment:
Q  420 acatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||||||  ||||||| ||||||| ||||||||||| ||||||||||    
T  1401091 acatgtccgacatcgggacacacctaatctgaggagtgtccatgcttcatag 1401142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 422 - 473
Target Start/End: Original strand, 5307326 - 5307377
Alignment:
Q  422 atgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagat 473  Q
    |||| ||||||  ||||||||||||||| |||||||| ||||||||||||||    
T  5307326 atgtgcgacactaggacacgcctaatccaaggagtgtacgtgcttcatagat 5307377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 466
Target Start/End: Complemental strand, 11722116 - 11722073
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgctt 466  Q
    |||||||||||||||||||   ||||||||||||||||||||||    
T  11722116 tgtccgacacagggacacgttgaatccgaggagtgtccgtgctt 11722073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 440 - 471
Target Start/End: Original strand, 19213881 - 19213912
Alignment:
Q  440 cgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||||||||||||||||||||||||||    
T  19213881 cgcctaatccgaggagtgtccgtgcttcatag 19213912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 466
Target Start/End: Original strand, 43250075 - 43250118
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgctt 466  Q
    ||||||||||  ||||||||||||| ||||||||||||||||||    
T  43250075 tgtccgacaccaggacacgcctaattcgaggagtgtccgtgctt 43250118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 374 - 459
Target Start/End: Original strand, 26733328 - 26733411
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtc 459  Q
    |||||| ||||||| |||||| | |||| ||||||  | ||||||| ||||||||| || || ||||||||||||||||| |||||    
T  26733328 tcacataattcagtctaattaaatgtgtcggtgtc--ggacacgacgcatgtccgatacgggaacacgcctaatccgaggggtgtc 26733411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 438 - 476
Target Start/End: Original strand, 27945104 - 27945142
Alignment:
Q  438 cacgcctaatccgaggagtgtccgtgcttcatagattat 476  Q
    |||||||||  ||||||||||||||||||||||||||||    
T  27945104 cacgcctaactcgaggagtgtccgtgcttcatagattat 27945142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 435 - 472
Target Start/End: Complemental strand, 7328675 - 7328638
Alignment:
Q  435 ggacacgcctaatccgaggagtgtccgtgcttcataga 472  Q
    ||||||||||||||||| |||||| |||||||||||||    
T  7328675 ggacacgcctaatccgatgagtgttcgtgcttcataga 7328638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 462
Target Start/End: Complemental strand, 14077432 - 14077383
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgt 462  Q
    ||||||| ||||||||||||  |||||||||| | |||||||||||||||    
T  14077432 acacgacgcatgtccgacaccaggacacgccttaaccgaggagtgtccgt 14077383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 462
Target Start/End: Complemental strand, 14387460 - 14387411
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgt 462  Q
    ||||||| ||||||||||||  |||||||||| | |||||||||||||||    
T  14387460 acacgacgcatgtccgacaccaggacacgccttaaccgaggagtgtccgt 14387411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 471
Target Start/End: Complemental strand, 23128636 - 23128603
Alignment:
Q  438 cacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||||||||||||||||| |||||||||||    
T  23128636 cacgcctaatccgaggagtgtctgtgcttcatag 23128603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 471
Target Start/End: Complemental strand, 38134372 - 38134335
Alignment:
Q  434 gggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||||||||||||||||||||  |||||||||||    
T  38134372 gggacacgcctaatccgaggagtgtatgtgcttcatag 38134335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 423 - 472
Target Start/End: Complemental strand, 38804537 - 38804488
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcataga 472  Q
    |||||||| | |||||| ||||||||||||||||||  ||||||||||||    
T  38804537 tgtccgacgccgggacatgcctaatccgaggagtgtatgtgcttcataga 38804488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 301 - 329
Target Start/End: Original strand, 2334205 - 2334233
Alignment:
Q  301 tatgaagcacggatacagacacggacacg 329  Q
    |||||||||||||||||||||||||||||    
T  2334205 tatgaagcacggatacagacacggacacg 2334233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 415 - 459
Target Start/End: Original strand, 10043007 - 10043051
Alignment:
Q  415 acgacacatgtccgacacagggacacgcctaatccgaggagtgtc 459  Q
    |||||||||||||||||| |||||||| ||||||| |||| ||||    
T  10043007 acgacacatgtccgacaccgggacacgtctaatccaaggaatgtc 10043051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 434 - 470
Target Start/End: Complemental strand, 11272567 - 11272531
Alignment:
Q  434 gggacacgcctaatccgaggagtgtccgtgcttcata 470  Q
    ||||||||||||||||||||||| || ||||||||||    
T  11272567 gggacacgcctaatccgaggagtatctgtgcttcata 11272531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 300 - 328
Target Start/End: Original strand, 17851375 - 17851403
Alignment:
Q  300 ctatgaagcacggatacagacacggacac 328  Q
    |||||||||||||||||||||||||||||    
T  17851375 ctatgaagcacggatacagacacggacac 17851403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 413 - 469
Target Start/End: Original strand, 22868108 - 22868164
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 469  Q
    |||| |||| |||| ||||| ||||||| | ||||||||||||||||| ||||||||    
T  22868108 acacaacacgtgtcagacaccgggacacacataatccgaggagtgtccatgcttcat 22868164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 469
Target Start/End: Complemental strand, 26033444 - 26033392
Alignment:
Q  417 gacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 469  Q
    ||||| ||||||| || | ||||| |||||||||||||||||||||| |||||    
T  26033444 gacacgtgtccgataccgcgacacacctaatccgaggagtgtccgtgtttcat 26033392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 471
Target Start/End: Original strand, 28155637 - 28155673
Alignment:
Q  435 ggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  28155637 ggacacgcctaatccaaggaatgtccgtgcttcatag 28155673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 9e-25; HSPs: 62)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 374 - 471
Target Start/End: Complemental strand, 21576780 - 21576685
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||| ||||||||||||||||||||| | ||||  | ||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  21576780 tcacataattcagtgtaattacaagtgtcgatgtc--ggacacgacacgtgtctgacactgggacacgcctaatccgaggagtgtccgtgcttcatag 21576685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 374 - 469
Target Start/End: Complemental strand, 21191091 - 21190998
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 469  Q
    |||||| ||||||||||||||||||||| ||||||  | |||| |||| |||||||| | ||||||||||||||||||||||||||||||||||||    
T  21191091 tcacataattcagtgtaattacaagtgtcggtgtc--ggacacaacacgtgtccgactccgggacacgcctaatccgaggagtgtccgtgcttcat 21190998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 374 - 472
Target Start/End: Original strand, 31084347 - 31084448
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgt---acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 470  Q
    |||||| ||||| ||||||||||||||| | |||| |||   ||||||||| |||||||||| |||||| ||||||||||||||||||||||| ||||||    
T  31084347 tcacataattcaatgtaattacaagtgtcgatgtcgtgtcggacacgacacgtgtccgacactgggacatgcctaatccgaggagtgtccgtggttcata 31084446  T
Q  471 ga 472  Q
    ||    
T  31084447 ga 31084448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 374 - 471
Target Start/End: Complemental strand, 21194158 - 21194063
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||| |||||||||||||| | || |||||||  || |||||||||||||| ||||| ||| ||||||||||||||||||||||||||||| ||||    
T  21194158 tcacatcattcagtgtaattataggtattggtgt--tggacacgacacatgtcagacaccggggcacgcctaatccgaggagtgtccgtgctttatag 21194063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 381 - 459
Target Start/End: Original strand, 15382510 - 15382592
Alignment:
Q  381 attcagtgtaattacaagtgttggtgtc----ttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtc 459  Q
    ||||||| ||||||||||||| ||||||    ||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  15382510 attcagtataattacaagtgtcggtgtcggtgttggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtc 15382592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 413 - 471
Target Start/End: Original strand, 17123109 - 17123166
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  17123109 acacgaaacatgtccgacac-gggacacgcctaatccgaggagtgtccgtgcttcatag 17123166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 376 - 469
Target Start/End: Original strand, 43001826 - 43001922
Alignment:
Q  376 acattattcagtgtaattacaagtgttggtgtcttgt---acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 469  Q
    |||| ||||||||||||||||||||||||||   |||   ||||||||| ||||  ||||  |||||||||||||||||||||||||||||||||||    
T  43001826 acataattcagtgtaattacaagtgttggtgatgtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 43001922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 374 - 471
Target Start/End: Original strand, 43564905 - 43565000
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||| ||| |||||||||| |||||| ||||||  | ||||||||  |||||||| | ||||||||||||||||||| ||||||||||||||||||    
T  43564905 tcacataatttagtgtaattataagtgtcggtgtc--ggacacgacatgtgtccgacgccgggacacgcctaatccgagaagtgtccgtgcttcatag 43565000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 413 - 468
Target Start/End: Complemental strand, 39268596 - 39268541
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttca 468  Q
    ||||||||  |||||||||| |||||||||||||||||||||||||||||||||||    
T  39268596 acacgacatgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttca 39268541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 413 - 471
Target Start/End: Original strand, 7677777 - 7677835
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||| |||||||||||||| |||||||||||||||||||||| ||| |||||||||||    
T  7677777 acacgtcacatgtccgacaccgggacacgcctaatccgaggagagtcggtgcttcatag 7677835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 342 - 472
Target Start/End: Original strand, 42893353 - 42893480
Alignment:
Q  342 acacaccgacacagctaataatttnnnnnnnntcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacg 441  Q
    ||||||||||||||||||||||||        |||||| || |||||||||||||||||| ||||||    |||| |||| ||||||||||  |||||||    
T  42893353 acacaccgacacagctaataatttgaaaaaa-tcacataatccagtgtaattacaagtgtcggtgtcag--acacaacacgtgtccgacaccaggacacg 42893449  T
Q  442 cctaatccgaggagtgtccgtgcttcataga 472  Q
    ||||||  ||||||||||| |||||||||||    
T  42893450 cctaatatgaggagtgtccatgcttcataga 42893480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 418 - 471
Target Start/End: Original strand, 14873588 - 14873641
Alignment:
Q  418 acacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||| ||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  14873588 acacgtgtccaacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 14873641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 423 - 472
Target Start/End: Complemental strand, 19820376 - 19820327
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcataga 472  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  19820376 tgtccgacaccgggacacgcctaatcagaggagtgtccgtgcttcataga 19820327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 381 - 469
Target Start/End: Complemental strand, 30502416 - 30502330
Alignment:
Q  381 attcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 469  Q
    |||||||||||||| | |||| ||||||  | |||||||||||||||||||| |||||| ||||||||| |||| ||| ||||||||||    
T  30502416 attcagtgtaattatatgtgtcggtgtc--ggacacgacacatgtccgacactgggacatgcctaatccaaggattgttcgtgcttcat 30502330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 381 - 469
Target Start/End: Complemental strand, 30542759 - 30542673
Alignment:
Q  381 attcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 469  Q
    |||||||||||||| | |||| ||||||  | |||||||||||||||||||| |||||| ||||||||| |||| ||| ||||||||||    
T  30542759 attcagtgtaattatatgtgtcggtgtc--ggacacgacacatgtccgacactgggacatgcctaatccaaggattgttcgtgcttcat 30542673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 376 - 471
Target Start/End: Original strand, 27932261 - 27932354
Alignment:
Q  376 acattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||| ||||||||||||||||| | ||||||||  | ||||||||| |||| |||||  ||||||||||||| ||||||||||  |||||||||||    
T  27932261 acataattcagtgtaattacaaatcttggtgtc--ggacacgacacgtgtcggacaccaggacacgcctaattcgaggagtgtttgtgcttcatag 27932354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 419 - 471
Target Start/End: Complemental strand, 38464365 - 38464313
Alignment:
Q  419 cacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||||||||| ||||||| |||||||||||||||||| |||||||||||    
T  38464365 cacatgtccgacaccgggacacacctaatccgaggagtgtctgtgcttcatag 38464313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 415 - 478
Target Start/End: Complemental strand, 32766928 - 32766865
Alignment:
Q  415 acgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagattatta 478  Q
    ||||||| ||||||||||  ||| ||| |||||| |||||||||||||||||||||||||||||    
T  32766928 acgacacgtgtccgacaccaggatacgtctaatctgaggagtgtccgtgcttcatagattatta 32766865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 435 - 473
Target Start/End: Complemental strand, 22423800 - 22423762
Alignment:
Q  435 ggacacgcctaatccgaggagtgtccgtgcttcatagat 473  Q
    |||||||||||||||||||||||||||||||||||||||    
T  22423800 ggacacgcctaatccgaggagtgtccgtgcttcatagat 22423762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 374 - 471
Target Start/End: Complemental strand, 28588709 - 28588614
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||| |||||||||||||| | |||| ||||||  | ||||||||||| || |||||  |||||||| |||||||| |||||||| ||||||||||    
T  28588709 tcacataattcagtgtaattataggtgtcggtgtc--ggacacgacacatatctgacaccaggacacgcttaatccgaagagtgtccatgcttcatag 28588614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 413 - 479
Target Start/End: Original strand, 30098398 - 30098464
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagattattat 479  Q
    ||||||||| |||| |||||  |||||| ||||||||||||| |||||||||||||||| |||||||    
T  30098398 acacgacacgtgtcagacaccaggacacacctaatccgaggaatgtccgtgcttcatagtttattat 30098464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 425 - 471
Target Start/End: Original strand, 39698625 - 39698671
Alignment:
Q  425 tccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||    
T  39698625 tccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 39698671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 434 - 471
Target Start/End: Original strand, 35017125 - 35017162
Alignment:
Q  434 gggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||||||||||||||||||||||||||||||||    
T  35017125 gggacacgcctaatccgaggagtgtccgtgcttcatag 35017162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 435 - 471
Target Start/End: Original strand, 10298633 - 10298669
Alignment:
Q  435 ggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||||||||||||||||||||||||||||||||    
T  10298633 ggacacgcctaatccgaggagtgtccgtgcttcatag 10298669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 423 - 463
Target Start/End: Original strand, 17088362 - 17088402
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtg 463  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  17088362 tgtccgacaccgggacacgcctaatccgaggagtgtccgtg 17088402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 413 - 469
Target Start/End: Complemental strand, 23015982 - 23015926
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 469  Q
    ||||||||  |||||||||  |||||||||||||||||||||||||||| |||||||    
T  23015982 acacgacatgtgtccgacattgggacacgcctaatccgaggagtgtccgagcttcat 23015926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 423 - 470
Target Start/End: Original strand, 3966585 - 3966632
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 470  Q
    ||||| ||| ||||||||| ||||||||||||||||||||||||||||    
T  3966585 tgtccaacagagggacacgtctaatccgaggagtgtccgtgcttcata 3966632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 374 - 472
Target Start/End: Original strand, 4105283 - 4105379
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcataga 472  Q
    |||||| ||||||||||||||||||||| ||| ||    || ||| |  |||| || || |||||||||||||||||||||||||||||||||| ||||    
T  4105283 tcacataattcagtgtaattacaagtgtaggtatcag--actcgatatgtgtctgatactgggacacgcctaatccgaggagtgtccgtgcttcgtaga 4105379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 299 - 365
Target Start/End: Original strand, 22013363 - 22013430
Alignment:
Q  299 tctatgaagcacggatacagacac-ggacacgacacatactctaacacaccgacacagctaataattt 365  Q
    |||||||||||||||||| ||||| |||||||||||  || || |||| |||||||||||||||||||    
T  22013363 tctatgaagcacggatacggacaccggacacgacacggacactgacacgccgacacagctaataattt 22013430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 413 - 471
Target Start/End: Complemental strand, 16304424 - 16304366
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||| || ||||||| | |||||| |||||||||||| ||||||||||||||||    
T  16304424 acacgacacgtgcccgacaccgagacacgtctaatccgaggaatgtccgtgcttcatag 16304366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 413 - 471
Target Start/End: Original strand, 21522822 - 21522880
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||| |||||| ||| |||||||||||||||| | |||||||||||| ||||||    
T  21522822 acacgacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgcatcatag 21522880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 413 - 471
Target Start/End: Original strand, 21533388 - 21533446
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||| |||||| ||| |||||||||||||||| | |||||||||||| ||||||    
T  21533388 acacgacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgcatcatag 21533446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 413 - 467
Target Start/End: Original strand, 30183621 - 30183675
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttc 467  Q
    ||||||||| |||||||||| |||||||||||||| |||| |||||| |||||||    
T  30183621 acacgacacgtgtccgacactgggacacgcctaattcgagaagtgtctgtgcttc 30183675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 413 - 470
Target Start/End: Original strand, 6401570 - 6401627
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 470  Q
    ||||||||| |||| ||||| |||| |||||| |||| ||||||||||||||||||||    
T  6401570 acacgacacgtgtctgacacggggatacgccttatccaaggagtgtccgtgcttcata 6401627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 423 - 472
Target Start/End: Complemental strand, 19552524 - 19552475
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcataga 472  Q
    ||||||||||  |||||| |||||||||||||||||||||| ||||||||    
T  19552524 tgtccgacacttggacacacctaatccgaggagtgtccgtgtttcataga 19552475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 423 - 471
Target Start/End: Original strand, 2419938 - 2419986
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||| | ||||||| |||||||||| |||||||||||||||||||    
T  2419938 tgtccgaccccgggacacacctaatccgatgagtgtccgtgcttcatag 2419986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 423 - 471
Target Start/End: Original strand, 2436982 - 2437030
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||||   ||||||||||||||||||||||| ||||||||||||    
T  2436982 tgtccgacaccaagacacgcctaatccgaggagtgttcgtgcttcatag 2437030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 423 - 471
Target Start/End: Complemental strand, 17593711 - 17593663
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||| |||| ||||||||| ||||||||||||||||||| ||||||||    
T  17593711 tgtccaacaccgggacacgcttaatccgaggagtgtccgtacttcatag 17593663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 469
Target Start/End: Original strand, 19579773 - 19579829
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 469  Q
    |||||||| |||||  |||| ||||||||||||||||||||||||| |||| |||||    
T  19579773 acacgacatatgtctaacaccgggacacgcctaatccgaggagtgtacgtgtttcat 19579829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 374 - 469
Target Start/End: Complemental strand, 21351940 - 21351852
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 469  Q
    |||||| ||||||||||||||||||||| |||||| |||   ||     |||||||||| || ||||| ||||||||| |||||||||||||||||    
T  21351940 tcacataattcagtgtaattacaagtgtcggtgtcatgt---cgg----tgtccgacactggaacacgtctaatccgaagagtgtccgtgcttcat 21351852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 469
Target Start/End: Complemental strand, 24238659 - 24238603
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 469  Q
    ||||||||| ||||| |||| |||||| || |||||| |||||||||||||||||||    
T  24238659 acacgacacgtgtccaacactgggacatgcataatcctaggagtgtccgtgcttcat 24238603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 435 - 471
Target Start/End: Complemental strand, 24906288 - 24906252
Alignment:
Q  435 ggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||||||| |||||||||||||||||||||||    
T  24906288 ggacacgcctaattcgaggagtgtccgtgcttcatag 24906252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 423 - 471
Target Start/End: Complemental strand, 39695998 - 39695951
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||||| |||||||||||||||| ||||||||| |||||||||||    
T  39695998 tgtccgacac-gggacacgcctaatcctaggagtgtcggtgcttcatag 39695951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 424 - 471
Target Start/End: Complemental strand, 37328822 - 37328775
Alignment:
Q  424 gtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||| || |||| |||| ||||||||||||||||||||||||||||    
T  37328822 gtccgataccgggatacgcttaatccgaggagtgtccgtgcttcatag 37328775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 436 - 474
Target Start/End: Original strand, 2548464 - 2548502
Alignment:
Q  436 gacacgcctaatccgaggagtgtccgtgcttcatagatt 474  Q
    ||||| |||||||||||||||||| ||||||||||||||    
T  2548464 gacacacctaatccgaggagtgtctgtgcttcatagatt 2548502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 437 - 471
Target Start/End: Original strand, 6770621 - 6770655
Alignment:
Q  437 acacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||||||||| |||||||||||||||||||    
T  6770621 acacgcctaatccgaagagtgtccgtgcttcatag 6770655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 300 - 365
Target Start/End: Complemental strand, 19820503 - 19820437
Alignment:
Q  300 ctatgaagcacggatacagacac-ggacacgacacatactctaacacaccgacacagctaataattt 365  Q
    ||||||||||||||||| ||||| |||||||||||  || || |||| ||||||| |||||||||||    
T  19820503 ctatgaagcacggatacggacaccggacacgacacggacactgacactccgacaccgctaataattt 19820437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 413 - 467
Target Start/End: Complemental strand, 36642749 - 36642696
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttc 467  Q
    ||||||||| |||||||||| ||||||||||||||  |||||||||| |||||||    
T  36642749 acacgacacgtgtccgacac-gggacacgcctaattggaggagtgtcggtgcttc 36642696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 436 - 474
Target Start/End: Original strand, 36838615 - 36838653
Alignment:
Q  436 gacacgcctaatccgaggagtgtccgtgcttcatagatt 474  Q
    |||||||||||||| ||||||||| ||||||||||||||    
T  36838615 gacacgcctaatccaaggagtgtctgtgcttcatagatt 36838653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 299 - 329
Target Start/End: Original strand, 39205847 - 39205877
Alignment:
Q  299 tctatgaagcacggatacagacacggacacg 329  Q
    |||||||||||||||||||||||||||||||    
T  39205847 tctatgaagcacggatacagacacggacacg 39205877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 435 - 469
Target Start/End: Original strand, 41995547 - 41995581
Alignment:
Q  435 ggacacgcctaatccgaggagtgtccgtgcttcat 469  Q
    ||||||||||||||| |||||||||||||||||||    
T  41995547 ggacacgcctaatcctaggagtgtccgtgcttcat 41995581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 413 - 471
Target Start/End: Original strand, 42029813 - 42029871
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||||||||| | |||   ||||||||| ||||||||||||||||||| ||||||    
T  42029813 acacgacacatgtctgtcacgtagacacgccttatccgaggagtgtccgtgcatcatag 42029871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 473
Target Start/End: Original strand, 14674333 - 14674370
Alignment:
Q  436 gacacgcctaatccgaggagtgtccgtgcttcatagat 473  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  14674333 gacacacctaatccgaggagtgtctgtgcttcatagat 14674370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 427 - 476
Target Start/End: Original strand, 15884052 - 15884101
Alignment:
Q  427 cgacacagggacacgcctaatccgaggagtgtccgtgcttcatagattat 476  Q
    |||||| || ||||||||||||||||||||||| ||| ||||||| ||||    
T  15884052 cgacactggaacacgcctaatccgaggagtgtctgtgtttcatagcttat 15884101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 333
Target Start/End: Complemental strand, 17593822 - 17593789
Alignment:
Q  300 ctatgaagcacggatacagacacggacacgacac 333  Q
    |||||||||||||||||| |||||||||||||||    
T  17593822 ctatgaagcacggatacaaacacggacacgacac 17593789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 466
Target Start/End: Original strand, 35904730 - 35904783
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgctt 466  Q
    |||| |||||||||||||||  |||||||| ||||||||  |||||||||||||    
T  35904730 acacaacacatgtccgacactaggacacgcttaatccgataagtgtccgtgctt 35904783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 333
Target Start/End: Original strand, 43554488 - 43554525
Alignment:
Q  296 atatctatgaagcacggatacagacacggacacgacac 333  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  43554488 atatatatgaagcacggacacagacacggacacgacac 43554525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 300 - 328
Target Start/End: Original strand, 6401442 - 6401470
Alignment:
Q  300 ctatgaagcacggatacagacacggacac 328  Q
    |||||||||||||||||||||||||||||    
T  6401442 ctatgaagcacggatacagacacggacac 6401470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 300 - 328
Target Start/End: Original strand, 14674231 - 14674259
Alignment:
Q  300 ctatgaagcacggatacagacacggacac 328  Q
    |||||||||||||||||||||||||||||    
T  14674231 ctatgaagcacggatacagacacggacac 14674259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 471
Target Start/End: Complemental strand, 17393353 - 17393305
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||||| ||||||| | ||||||||||| ||| ||||||||||||    
T  17393353 tgtccgacaccgggacactcgtaatccgaggaatgttcgtgcttcatag 17393305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 415 - 467
Target Start/End: Complemental strand, 30099034 - 30098982
Alignment:
Q  415 acgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttc 467  Q
    ||||||| |||| ||||| ||||||||||| |||| |||||||| ||||||||    
T  30099034 acgacacgtgtctgacacggggacacgccttatccaaggagtgttcgtgcttc 30098982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 471
Target Start/End: Original strand, 32444850 - 32444898
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||| |||||||||||| | ||||||||| ||||||| |||||||||||    
T  32444850 tgtcagacacagggacatgtctaatccgaagagtgtcagtgcttcatag 32444898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 9e-25; HSPs: 72)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 374 - 471
Target Start/End: Complemental strand, 22515922 - 22515827
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||| ||| ||||||||||||||||| ||||||  | ||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||    
T  22515922 tcacataatttagtgtaattacaagtgtcggtgtc--ggacacgacacatatccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 22515827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 374 - 469
Target Start/End: Complemental strand, 1486744 - 1486646
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgt---acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 469  Q
    |||||| |||||||||||||| |||||| |||||| |||   ||||||||| |||||||||| |||||||||||||||||||||||||| |||||||||    
T  1486744 tcacataattcagtgtaattataagtgtcggtgtcgtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtctgtgcttcat 1486646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 381 - 471
Target Start/End: Original strand, 37598862 - 37598950
Alignment:
Q  381 attcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||||||||| |||||| ||||||  | ||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||    
T  37598862 attcagtgtaattataagtgtcggtgtc--ggacacgacacgtgtccgacaatgggacacgcctaatccgaggagtgtccgtgcttcatag 37598950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 300 - 472
Target Start/End: Complemental strand, 38078771 - 38078600
Alignment:
Q  300 ctatgaagcacggatacagacacggacac--gacacatactctaacacaccgacacagctaataatttnnnnnnnntcacattattcagtgtaattacaa 397  Q
    ||||||||||||||||| |||||||||||  |||||  || || ||||  ||||||||||||||||||        |||||| ||||| |||||||||||    
T  38078771 ctatgaagcacggatacggacacggacaccggacacgaacactgacacgtcgacacagctaataatttgaaaaaa-tcacataattcaatgtaattacaa 38078673  T
Q  398 gtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcataga 472  Q
    |||| ||||||  | ||||||||||||| | ||||  |||||||||||||||||||||| | |||||||||||||    
T  38078672 gtgtcggtgtc--ggacacgacacatgttcaacaccaggacacgcctaatccgaggagtattcgtgcttcataga 38078600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 374 - 471
Target Start/End: Original strand, 1815281 - 1815376
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||| ||||||||||||||||||||| ||||||    |||||||||||||||||||| ||||||||||||||| |||||||| ||||| |||||||    
T  1815281 tcacataattcagtgtaattacaagtgtcggtgtccg--acacgacacatgtccgacaccgggacacgcctaatctgaggagtgaccgtgattcatag 1815376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 374 - 471
Target Start/End: Original strand, 18337353 - 18337448
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||| ||||||||||||||||||||| ||||||  | |||| |||| |||||||||| |||||| |||| ||||||||||||||||||||||||||    
T  18337353 tcacataattcagtgtaattacaagtgtcggtgtc--ggacacaacacgtgtccgacactgggacatgcctgatccgaggagtgtccgtgcttcatag 18337448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 374 - 470
Target Start/End: Complemental strand, 40258968 - 40258874
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 470  Q
    |||||| ||||||||||||||||||||| ||||||    ||||||||| ||||||||||  |||||||||||||||||||||||||| |||||||||    
T  40258968 tcacataattcagtgtaattacaagtgtcggtgtcag--acacgacacctgtccgacaccaggacacgcctaatccgaggagtgtccatgcttcata 40258874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 374 - 471
Target Start/End: Original strand, 47989521 - 47989627
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgt---------acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgc 464  Q
    |||||| ||||||||||||||||||||| |||||| |||         |||||||||||||| ||||  |||||||||||||||||||||||||||||||    
T  47989521 tcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacatgtctgacatcgggacacgcctaatccgaggagtgtccgtgc 47989620  T
Q  465 ttcatag 471  Q
    |||||||    
T  47989621 ttcatag 47989627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 381 - 469
Target Start/End: Complemental strand, 42359477 - 42359391
Alignment:
Q  381 attcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 469  Q
    ||||||||||||||||||||| ||||||  | ||| |||   |||||||||| ||||||||||||||||||||||||||||||||||||    
T  42359477 attcagtgtaattacaagtgtcggtgtc--ggacaagacgtgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 42359391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 322 - 475
Target Start/End: Original strand, 5944254 - 5944417
Alignment:
Q  322 cggacacgacacatactctaacacaccgacacagctaataatttnnnnnnnn-tcacattattcagtgtaattacaagtgttggtgtcttgt-------- 412  Q
    ||||||||||||| || || |||| ||| |||||||||||||||         |||||| |||||||||||||| |||||| |||||| |||            
T  5944254 cggacacgacacagacactgacacgccgccacagctaataatttgaaaaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgtcgatgacg 5944353  T
Q  413 -acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagatta 475  Q
     |||| ||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||    
T  5944354 gacacaacacatgtccgacaccgggatacgcctaatccgaggagtgttcgtgcttcatagatta 5944417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 385 - 471
Target Start/End: Complemental strand, 46348407 - 46348323
Alignment:
Q  385 agtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||||||||||| ||||||  | ||||||||| |||||||||| | ||||||||| |||||||| |||||||||||||||||    
T  46348407 agtgtaattacaagtgtcggtgtc--ggacacgacacgtgtccgacaccgagacacgcctgatccgaggtgtgtccgtgcttcatag 46348323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 374 - 476
Target Start/End: Original strand, 51410049 - 51410149
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagat 473  Q
    |||||| ||||||||||||||||||||| ||||||  | ||||||||| | |||||||| | |||||||||||||| |||||| | |||||||||||| |    
T  51410049 tcacataattcagtgtaattacaagtgtcggtgtc--ggacacgacacgtatccgacaccgagacacgcctaatccaaggagtattcgtgcttcataggt 51410146  T
Q  474 tat 476  Q
    |||    
T  51410147 tat 51410149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 413 - 471
Target Start/End: Original strand, 9828116 - 9828174
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||||    
T  9828116 acacgacacgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcatag 9828174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 413 - 471
Target Start/End: Original strand, 40917821 - 40917879
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  40917821 acacgacacgtgtccgacaccgggacacgcctaatccgaggactgtccgtgcttcatag 40917879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 413 - 471
Target Start/End: Original strand, 6427536 - 6427594
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||| |||||||||| ||||||||||||||| || |||||||||||||||||||    
T  6427536 acacgacacgtgtccgacaccgggacacgcctaatctgatgagtgtccgtgcttcatag 6427594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 374 - 474
Target Start/End: Complemental strand, 1705027 - 1704932
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagat 473  Q
    |||||| |||||| |||||||||||||| |||||| |||  |||     |||||||||| | |||||||||||||| |||||||||| ||||||||||||    
T  1705027 tcacataattcagggtaattacaagtgtcggtgtcgtgtcaacg-----tgtccgacaccgagacacgcctaatccaaggagtgtccatgcttcatagat 1704933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 416 - 471
Target Start/End: Complemental strand, 18556440 - 18556385
Alignment:
Q  416 cgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||| | |||||||| ||||||||||||||||||| ||||||||||||||||||    
T  18556440 cgacacgtatccgacactgggacacgcctaatccgagaagtgtccgtgcttcatag 18556385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 374 - 471
Target Start/End: Original strand, 36878485 - 36878585
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacaca-----gggacacgcctaatccgaggagtgtccgtgcttca 468  Q
    |||||| |||||||||||||| | |||| |||||||   |||||| |||||||||||||      |||||||||||||||| ||||||||||||||||||    
T  36878485 tcacataattcagtgtaattataggtgtcggtgtctg--acacgaaacatgtccgacacgacacggggacacgcctaatcccaggagtgtccgtgcttca 36878582  T
Q  469 tag 471  Q
    |||    
T  36878583 tag 36878585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 413 - 471
Target Start/End: Complemental strand, 5898264 - 5898206
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||| ||||| |||| |||||||| |||||||||||||||||||||||| ||||    
T  5898264 acacgacacgtgtccaacaccgggacacgtctaatccgaggagtgtccgtgctttatag 5898206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 423 - 469
Target Start/End: Complemental strand, 16297269 - 16297223
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 469  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||    
T  16297269 tgtccgacaccaggacacgcctaatccgaggagtgtccgtgcttcat 16297223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 425 - 471
Target Start/End: Complemental strand, 21366038 - 21365992
Alignment:
Q  425 tccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||    
T  21366038 tccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 21365992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 413 - 471
Target Start/End: Complemental strand, 32461451 - 32461393
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||| |||| ||||| |||||||||||||||| || ||||||||||||||||||    
T  32461451 acacgacacgtgtctgacactgggacacgcctaatccaagaagtgtccgtgcttcatag 32461393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 421 - 471
Target Start/End: Complemental strand, 40747757 - 40747707
Alignment:
Q  421 catgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||| |||||||||||| |||||||||||||| |||||||||||||||    
T  40747757 catgtcccacacagggacacccctaatccgaggagcgtccgtgcttcatag 40747707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 418 - 471
Target Start/End: Complemental strand, 19562608 - 19562556
Alignment:
Q  418 acacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||| |||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  19562608 acacgtgtccgacacagggacacacctaatccgaggagtgt-cgtgcttcatag 19562556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 434 - 471
Target Start/End: Complemental strand, 35702579 - 35702542
Alignment:
Q  434 gggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||||||||||||||||||||||||||||||||    
T  35702579 gggacacgcctaatccgaggagtgtccgtgcttcatag 35702542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 374 - 471
Target Start/End: Original strand, 113323 - 113412
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||| ||||||||||||||||||||| |||||| |||        | ||||| |||| |||||||||||||||||||||||| || ||||||||||    
T  113323 tcacataattcagtgtaattacaagtgtaggtgtcgtgt--------cgtgtccaacaccgggacacgcctaatccgaggagtgcccatgcttcatag 113412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 423 - 471
Target Start/End: Original strand, 2218299 - 2218347
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||||  |||||||||||||| ||||||||||||||||||||||    
T  2218299 tgtccgacactaggacacgcctaatctgaggagtgtccgtgcttcatag 2218347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 423 - 471
Target Start/End: Original strand, 15765829 - 15765877
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  15765829 tgtctgacactgggacacgcctaatccgaagagtgtccgtgcttcatag 15765877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 376 - 471
Target Start/End: Complemental strand, 18190141 - 18190048
Alignment:
Q  376 acattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||| ||||||||||||||||||||| | ||||    |||| |||| |||||||||| ||||||| |||||||||||||||||  | |||||||||    
T  18190141 acataattcagtgtaattacaagtgtcgatgtcag--acacaacacgtgtccgacaccgggacacacctaatccgaggagtgtatgcgcttcatag 18190048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 427 - 471
Target Start/End: Complemental strand, 22881611 - 22881567
Alignment:
Q  427 cgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||| |||||||| |||||||||||||||||||||||||||||    
T  22881611 cgacaccgggacacgtctaatccgaggagtgtccgtgcttcatag 22881567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 435 - 471
Target Start/End: Original strand, 22947813 - 22947849
Alignment:
Q  435 ggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||||||||||||||||||||||||||||||||    
T  22947813 ggacacgcctaatccgaggagtgtccgtgcttcatag 22947849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 423 - 471
Target Start/End: Complemental strand, 29144368 - 29144320
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||||| || ||||||||||||||| |||||||||||||||||||    
T  29144368 tgtccgacaccggaacacgcctaatccgaagagtgtccgtgcttcatag 29144320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 423 - 471
Target Start/End: Original strand, 34741918 - 34741965
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||    
T  34741918 tgtccgacac-gggacacgcctaatccgaagagtgtccgtgcttcatag 34741965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 423 - 471
Target Start/End: Complemental strand, 46940796 - 46940748
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||||| || |||||||||||||||||||||| ||||||||||||    
T  46940796 tgtccgacaccggaacacgcctaatccgaggagtgttcgtgcttcatag 46940748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 428 - 471
Target Start/End: Complemental strand, 27965983 - 27965940
Alignment:
Q  428 gacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||    
T  27965983 gacaccgggacacgcctaatccgaggagtgtccatgcttcatag 27965940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 425 - 471
Target Start/End: Original strand, 16812629 - 16812675
Alignment:
Q  425 tccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||| || ||||||||||||||| ||||||||||||||||||||||    
T  16812629 tccgaaaccgggacacgcctaatctgaggagtgtccgtgcttcatag 16812675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 469
Target Start/End: Original strand, 17778580 - 17778670
Alignment:
Q  384 cagtgtaattacaagtgttggtgtcttgta-----cacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 469  Q
    |||||||||||||||||| |||||| |||      | |||||| |||||||||| |||||| |||||||||||| ||||| ||||||||||    
T  17778580 cagtgtaattacaagtgtcggtgtcgtgtcggtgtcgcgacacgtgtccgacaccgggacatgcctaatccgagaagtgttcgtgcttcat 17778670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 413 - 471
Target Start/End: Original strand, 25934688 - 25934746
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||| |||| ||||| |||| |||||| |||| |||||||||||||||||||||    
T  25934688 acacgacacgtgtctgacacggggatacgccttatccaaggagtgtccgtgcttcatag 25934746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 413 - 471
Target Start/End: Complemental strand, 31694697 - 31694639
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||| |||||| | |||||| || |||||||||||| ||||||||||||||||||||||    
T  31694697 acacaacacatattcgacaccggaacacgcctaatctgaggagtgtccgtgcttcatag 31694639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 426 - 471
Target Start/End: Original strand, 6574051 - 6574096
Alignment:
Q  426 ccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||| |||||||||||||||| ||||||| |||||||||||||    
T  6574051 ccgacactgggacacgcctaatccaaggagtgaccgtgcttcatag 6574096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 413 - 470
Target Start/End: Complemental strand, 10577733 - 10577676
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 470  Q
    ||||||| | |||| ||||| ||||||||||| |||| ||||||||||||||||||||    
T  10577733 acacgacgcgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 10577676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 416 - 473
Target Start/End: Original strand, 32899955 - 32900012
Alignment:
Q  416 cgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagat 473  Q
    |||| |||||| ||||| ||||||| ||||||||||||| ||||| ||||||||||||    
T  32899955 cgacgcatgtcggacaccgggacacccctaatccgaggattgtccttgcttcatagat 32900012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 435 - 471
Target Start/End: Complemental strand, 7918190 - 7918154
Alignment:
Q  435 ggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||| ||||||||||||||||||||||||||||||    
T  7918190 ggacacacctaatccgaggagtgtccgtgcttcatag 7918154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 435 - 471
Target Start/End: Complemental strand, 9630597 - 9630561
Alignment:
Q  435 ggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||||||||||||||||||| ||||||||||||    
T  9630597 ggacacgcctaatccgaggagtgttcgtgcttcatag 9630561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 471
Target Start/End: Original strand, 18471354 - 18471414
Alignment:
Q  411 gtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||||| |||||||||| |  |||| |||||| |||||||||||||| ||||||||    
T  18471354 gtacacgacacgtgtccgacaccgaaacacacctaattcgaggagtgtccgtacttcatag 18471414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 421 - 477
Target Start/End: Complemental strand, 22794068 - 22794012
Alignment:
Q  421 catgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagattatt 477  Q
    |||||||||| | ||||||| |||||| |||||||||| |||||||||||| |||||    
T  22794068 catgtccgactccgggacacacctaattcgaggagtgtacgtgcttcatagcttatt 22794012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 417 - 473
Target Start/End: Complemental strand, 34712377 - 34712321
Alignment:
Q  417 gacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagat 473  Q
    ||||| ||||| |||| |||||||| ||||| | |||||||||||||||||||||||    
T  34712377 gacacgtgtcctacactgggacacgtctaattcaaggagtgtccgtgcttcatagat 34712321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 374 - 457
Target Start/End: Original strand, 40181895 - 40181976
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtg 457  Q
    |||||| |||||||||||||| | || | ||||||  | |||| |||| ||||| |||| ||||||||||||||||||||||||    
T  40181895 tcacataattcagtgtaattatatgtatcggtgtc--ggacacaacacgtgtcctacaccgggacacgcctaatccgaggagtg 40181976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 423 - 467
Target Start/End: Complemental strand, 48040462 - 48040418
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttc 467  Q
    |||||||||| ||||||||||||||  ||||||||||||||||||    
T  48040462 tgtccgacactgggacacgcctaattggaggagtgtccgtgcttc 48040418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 435 - 471
Target Start/End: Complemental strand, 48450586 - 48450550
Alignment:
Q  435 ggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||| |||||||||||||||||||||||||||||    
T  48450586 ggacacgtctaatccgaggagtgtccgtgcttcatag 48450550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 470
Target Start/End: Original strand, 10233327 - 10233374
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 470  Q
    ||||||||||  |||||| ||||||| |||||||||||||||||||||    
T  10233327 tgtccgacaccaggacacacctaatcagaggagtgtccgtgcttcata 10233374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 332
Target Start/End: Original strand, 23653318 - 23653349
Alignment:
Q  301 tatgaagcacggatacagacacggacacgaca 332  Q
    ||||||||||||||||||||||||||||||||    
T  23653318 tatgaagcacggatacagacacggacacgaca 23653349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 435 - 470
Target Start/End: Complemental strand, 48415702 - 48415667
Alignment:
Q  435 ggacacgcctaatccgaggagtgtccgtgcttcata 470  Q
    ||||||||||||||| ||||||||||||||||||||    
T  48415702 ggacacgcctaatccaaggagtgtccgtgcttcata 48415667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 417 - 471
Target Start/End: Complemental strand, 9690267 - 9690213
Alignment:
Q  417 gacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||| |||||||||| |||||||||||||||||  ||||||  |||||||||||    
T  9690267 gacacgtgtccgacaccgggacacgcctaatccggagagtgtttgtgcttcatag 9690213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 423 - 473
Target Start/End: Complemental strand, 17831510 - 17831460
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagat 473  Q
    |||||||||| |||||||||||||||  |||||||||| || |||||||||    
T  17831510 tgtccgacaccgggacacgcctaatcttaggagtgtccatgtttcatagat 17831460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 413 - 471
Target Start/End: Complemental strand, 30173749 - 30173691
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||||||||||||| |  |||||||||||| |||| || | ||||||||||||||    
T  30173749 acacgacacatgtccgactctaggacacgcctaacccgacgaatatccgtgcttcatag 30173691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 434 - 472
Target Start/End: Complemental strand, 35919263 - 35919225
Alignment:
Q  434 gggacacgcctaatccgaggagtgtccgtgcttcataga 472  Q
    ||||||||||||||| ||||| |||||||||||||||||    
T  35919263 gggacacgcctaatcggaggactgtccgtgcttcataga 35919225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 300 - 334
Target Start/End: Original strand, 43112938 - 43112972
Alignment:
Q  300 ctatgaagcacggatacagacacggacacgacaca 334  Q
    ||||||||||||| |||||||||||||||||||||    
T  43112938 ctatgaagcacgggtacagacacggacacgacaca 43112972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 423 - 473
Target Start/End: Original strand, 52903317 - 52903367
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagat 473  Q
    |||||||||| |||||||| || || ||| |||||||||||||||||||||    
T  52903317 tgtccgacaccgggacacggcttattcgaagagtgtccgtgcttcatagat 52903367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 365
Target Start/End: Complemental strand, 5376608 - 5376543
Alignment:
Q  300 ctatgaagcacggatacagacacggacacgacacatactctaacacaccgacacagctaataattt 365  Q
    |||||| ||||| |||||||  ||||||||||||  || ||||||| ||||||| |||||||||||    
T  5376608 ctatgaggcacgtatacagatccggacacgacacggacactaacacgccgacaccgctaataattt 5376543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 466
Target Start/End: Complemental strand, 9629887 - 9629834
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgctt 466  Q
    |||||||||||||||||||| |||||||| ||  ||| || |||||||||||||    
T  9629887 acacgacacatgtccgacaccgggacacgtctcgtccaagaagtgtccgtgctt 9629834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 470
Target Start/End: Original strand, 12919006 - 12919063
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 470  Q
    ||||||||| |||| ||||| |||||||| || ||||||| ||||| |||||||||||    
T  12919006 acacgacacgtgtctgacacggggacacggcttatccgagaagtgttcgtgcttcata 12919063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 333
Target Start/End: Original strand, 23439945 - 23439978
Alignment:
Q  300 ctatgaagcacggatacagacacggacacgacac 333  Q
    |||||||||||||| |||||||||||||||||||    
T  23439945 ctatgaagcacggacacagacacggacacgacac 23439978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 466
Target Start/End: Original strand, 26830648 - 26830701
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgctt 466  Q
    |||| |||| ||| ||| || ||||||||||||||| |||||||||||||||||    
T  26830648 acactacacgtgttcgataccgggacacgcctaatcagaggagtgtccgtgctt 26830701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 471
Target Start/End: Original strand, 30359447 - 30359484
Alignment:
Q  434 gggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||||| |||| ||||||||||||||||||||||    
T  30359447 gggacacgccaaatctgaggagtgtccgtgcttcatag 30359484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 462
Target Start/End: Original strand, 38503394 - 38503439
Alignment:
Q  417 gacacatgtccgacacagggacacgcctaatccgaggagtgtccgt 462  Q
    |||||||||| ||| ||||||||| |||||||||||| ||||||||    
T  38503394 gacacatgtctgacgcagggacacacctaatccgaggtgtgtccgt 38503439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 51363203 - 51363130
Alignment:
Q  40 atgtttggttcacggatgataaaaattgattttgaatgaatctattttgtaaaattgatttttacttaaaatga 113  Q
    |||||||||||   ||| | |||| || |||| ||||||||| ||||||||||||||||||| ||| |||||||    
T  51363203 atgtttggttctgcgatcacaaaatttaatttcgaatgaatcgattttgtaaaattgattttgactaaaaatga 51363130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 470
Target Start/End: Complemental strand, 5927362 - 5927281
Alignment:
Q  387 tgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 470  Q
    |||||||||||||||  |||||  | ||| |||| ||||||||||  |  ||| |||||||| |||||||||||||||||||||    
T  5927362 tgtaattacaagtgtcagtgtc--ggacatgacaaatgtccgacatcgaaacatgcctaatctgaggagtgtccgtgcttcata 5927281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 56 - 100
Target Start/End: Original strand, 22548205 - 22548249
Alignment:
Q  56 tgataaaaattgattttgaatgaatctattttgtaaaattgattt 100  Q
    ||||||||||||||||| | |||||  ||||||||||||||||||    
T  22548205 tgataaaaattgattttaagtgaattgattttgtaaaattgattt 22548249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 471
Target Start/End: Original strand, 25361963 - 25362012
Alignment:
Q  420 acatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||||||| || ||||  ||||||||| |||||||||||||||||||    
T  25361963 acatgtccgacaccggaacac--ctaatccgaagagtgtccgtgcttcatag 25362012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 413 - 469
Target Start/End: Original strand, 33202964 - 33203020
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 469  Q
    |||||| |||| |||||||| | ||||||||||||||||||||| |  |||||||||    
T  33202964 acacgatacatatccgacaccgtgacacgcctaatccgaggagtatatgtgcttcat 33203020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 439 - 471
Target Start/End: Complemental strand, 48547970 - 48547938
Alignment:
Q  439 acgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||| |||||||||||||||||||||||    
T  48547970 acgcctaattcgaggagtgtccgtgcttcatag 48547938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 322 - 473
Target Start/End: Original strand, 8771 - 8919
Alignment:
Q  322 cggacacgacacatactctaacacaccgacacagctaataatttnnnnnnnntcacattattcagtgtaattacaagtgttggtgtcttgtacacgacac 421  Q
    ||||||||||||  || || |||| |||||||||||||||||||        ||| |||||| ||||||||||||||||| ||||||  | |||||||||    
T  8771 cggacacgacacggacactgacacgccgacacagctaataatttgaaaaaa-tcatattatttagtgtaattacaagtgtcggtgtc--ggacacgacac 8867  T
Q  422 atgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagat 473  Q
     |||||||||| | ||||||||||||| ||||||| ||||||||||||||||    
T  8868 gtgtccgacaccgagacacgcctaatctgaggagtctccgtgcttcatagat 8919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 381 - 470
Target Start/End: Complemental strand, 490 - 403
Alignment:
Q  381 attcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 470  Q
    ||||||||||||||||||||| ||||||  | ||||||| | |||||||||| ||||||| |||||||||||||||||||||||||||||    
T  490 attcagtgtaattacaagtgtcggtgtc--ggacacgacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 1e-20; HSPs: 68)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 381 - 471
Target Start/End: Complemental strand, 36450782 - 36450694
Alignment:
Q  381 attcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||||||||||||||| ||||||  | ||||||| | ||||||||||  ||||||||||||||||||||||||| |||||||||||    
T  36450782 attcagtgtaattacaagtgtaggtgtc--ggacacgacgcgtgtccgacaccaggacacgcctaatccgaggagtgtctgtgcttcatag 36450694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 374 - 471
Target Start/End: Original strand, 18407743 - 18407838
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||| ||||||||||||||||||||| | || |  | ||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||    
T  18407743 tcacataattcagtgtaattacaagtgtcgctgcc--ggacacgacacatgtccgacactaggacacgcctaattggaggagtgtccgtgcttcatag 18407838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 415 - 471
Target Start/End: Original strand, 11803333 - 11803389
Alignment:
Q  415 acgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  11803333 acgacacatgtccgacacaggtacacgtctaatccgaggagtgtccgtgcttcatag 11803389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 374 - 468
Target Start/End: Original strand, 40332215 - 40332307
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttca 468  Q
    |||||| ||||||||||||||||||||| |||||   | ||||||||| ||||| |||| ||||| |||||||||||||||||||||||| ||||    
T  40332215 tcacataattcagtgtaattacaagtgtcggtgtg--ggacacgacacgtgtcccacaccgggacgcgcctaatccgaggagtgtccgtgtttca 40332307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 300 - 471
Target Start/End: Complemental strand, 4298994 - 4298830
Alignment:
Q  300 ctatgaagcacggatacagacacggacacgacacatactctaacacaccgacacagctaataatttnnnnnnnntcacattattcagtgtaattacaagt 399  Q
    ||||||||||||||||  ||||||||||||||||| |  ||||||| ||||||||| |||||||||        |||||| ||| | |||||||||||||    
T  4298994 ctatgaagcacggatatggacacggacacgacacagatactaacacgccgacacagttaataattt-gaaaaaatcacataatttaatgtaattacaagt 4298896  T
Q  400 gttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    || ||||||    | | ||||| ||| |||||| ||||||||||||||| ||||||||| ||||||||||||    
T  4298895 gtcggtgtc----agatgacacgtgttcgacac-gggacacgcctaatctgaggagtgt-cgtgcttcatag 4298830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 413 - 478
Target Start/End: Complemental strand, 29510291 - 29510226
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagattatta 478  Q
    ||||||| | |||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||    
T  29510291 acacgacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcataggttatta 29510226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 385 - 467
Target Start/End: Original strand, 5813627 - 5813707
Alignment:
Q  385 agtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttc 467  Q
    ||||||| ||||||||| ||||||  | ||||||||| |||||||||| ||||||||||||||  ||||||||||||||||||    
T  5813627 agtgtaaatacaagtgtcggtgtc--ggacacgacacgtgtccgacaccgggacacgcctaattggaggagtgtccgtgcttc 5813707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 374 - 472
Target Start/End: Original strand, 31557020 - 31557116
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcataga 472  Q
    |||||| ||||||||||||||||||| | ||||||    ||||||||||||||||||||  ||||||||||||||| ||| |||||| ||| |||||||    
T  31557020 tcacataattcagtgtaattacaagtttcggtgtcag--acacgacacatgtccgacaccaggacacgcctaatccaaggtgtgtccatgcctcataga 31557116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 413 - 471
Target Start/End: Original strand, 8343388 - 8343446
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||| |||||||||| |||||||||||||||||| ||||||| |||||||||||    
T  8343388 acacgacacgtgtccgacaccgggacacgcctaatccgaagagtgtctgtgcttcatag 8343446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 413 - 471
Target Start/End: Original strand, 22652048 - 22652106
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||  |||||||||| |||||||| |||||||||||||||||||||||||||||    
T  22652048 acacgacatgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcatag 22652106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 377 - 469
Target Start/End: Complemental strand, 926820 - 926730
Alignment:
Q  377 cattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 469  Q
    |||| ||||||||||||| |||||| ||||||  | || |||||| |||||||||| |||||| || | ||||||||||||||||||||||||    
T  926820 cattgttcagtgtaattataagtgtcggtgtc--ggacgcgacacgtgtccgacaccgggacatgctttatccgaggagtgtccgtgcttcat 926730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 374 - 469
Target Start/End: Original strand, 3025575 - 3025668
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 469  Q
    |||||| |||||||||||||| | ||||  |||||  | ||||||||| |||| ||||| | |||||| |||||||||||||||||||||||||||    
T  3025575 tcacataattcagtgtaattataggtgtcagtgtc--ggacacgacacgtgtctgacactgtgacacggctaatccgaggagtgtccgtgcttcat 3025668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 413 - 471
Target Start/End: Complemental strand, 6065644 - 6065586
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||||||||||||||| || |||||| |||| | |||||||||||||||||||||    
T  6065644 acacgacacatgtccgacaccggaacacgcataattcaaggagtgtccgtgcttcatag 6065586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 374 - 471
Target Start/End: Original strand, 8342996 - 8343086
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||| ||| ||||||||||||||||| ||||||  ||||| |     |||||||||| |||||||||||||||||| ||||||| |||||||||||    
T  8342996 tcacataatttagtgtaattacaagtgtcggtgtc--gtacatg-----tgtccgacaccgggacacgcctaatccgaagagtgtctgtgcttcatag 8343086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 425 - 471
Target Start/End: Complemental strand, 15816104 - 15816058
Alignment:
Q  425 tccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||    
T  15816104 tccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatag 15816058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 413 - 471
Target Start/End: Original strand, 21465484 - 21465542
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||| ||||| ||||||||| |||||||||  ||||||||||||||||||||||    
T  21465484 acacgacacgtgtccaacacagggatacgcctaatttgaggagtgtccgtgcttcatag 21465542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 22943347 - 22943301
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtc 459  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||    
T  22943347 acacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtc 22943301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 413 - 471
Target Start/End: Complemental strand, 34451019 - 34450961
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||| |||| ||||| ||||||||||| |||| |||||||||||||||||||||    
T  34451019 acacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 34450961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 426 - 471
Target Start/End: Original strand, 17751730 - 17751775
Alignment:
Q  426 ccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||    
T  17751730 ccgacaccgggacacgcctaatccgaggagtgtccgcgcttcatag 17751775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 426 - 471
Target Start/End: Original strand, 17760717 - 17760762
Alignment:
Q  426 ccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||    
T  17760717 ccgacaccgggacacgcctaatccgaggagtgtccgcgcttcatag 17760762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 434 - 474
Target Start/End: Original strand, 25566912 - 25566952
Alignment:
Q  434 gggacacgcctaatccgaggagtgtccgtgcttcatagatt 474  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  25566912 gggacacgcctaatccgaggagtgtctgtgcttcatagatt 25566952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 413 - 473
Target Start/End: Original strand, 29447516 - 29447576
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagat 473  Q
    ||||||||  |||||||||| |||||| | |||||| ||||||||||||||||||||||||    
T  29447516 acacgacatgtgtccgacaccgggacaggtctaatcggaggagtgtccgtgcttcatagat 29447576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 423 - 471
Target Start/End: Complemental strand, 30068016 - 30067968
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||||| ||||||| |||||||||| |||||||||||||||||||    
T  30068016 tgtccgacactgggacacacctaatccgatgagtgtccgtgcttcatag 30067968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 423 - 471
Target Start/End: Original strand, 39820500 - 39820547
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  39820500 tgtccgacac-gggacacgcctaatccgagaagtgtccgtgcttcatag 39820547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 427 - 474
Target Start/End: Complemental strand, 13436954 - 13436907
Alignment:
Q  427 cgacacagggacacgcctaatccgaggagtgtccgtgcttcatagatt 474  Q
    |||||| |||||||||||||||| ||||||||| ||||||||||||||    
T  13436954 cgacaccgggacacgcctaatccaaggagtgtctgtgcttcatagatt 13436907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 413 - 476
Target Start/End: Original strand, 14134760 - 14134823
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagattat 476  Q
    ||||||||| |||||| |||  ||||||||||||| ||||||||||||||| ||||||| ||||    
T  14134760 acacgacacgtgtccgtcaccaggacacgcctaattcgaggagtgtccgtgtttcatagcttat 14134823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 413 - 472
Target Start/End: Complemental strand, 26902162 - 26902103
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcataga 472  Q
    ||||||||| |||| | ||| ||||||||||| ||| |||||||||||||||||||||||    
T  26902162 acacgacacgtgtctggcacggggacacgccttatctgaggagtgtccgtgcttcataga 26902103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 436 - 471
Target Start/End: Original strand, 31514938 - 31514973
Alignment:
Q  436 gacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||||||||||||||||||||||||||||||    
T  31514938 gacacgcctaatccgaggagtgtccgtgcttcatag 31514973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 413 - 471
Target Start/End: Complemental strand, 3951534 - 3951476
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||| |||| ||||| || ||||||||||||| |||||| ||||||||||||||    
T  3951534 acacgacacgtgtctgacacgggaacacgcctaatccaaggagtttccgtgcttcatag 3951476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 413 - 471
Target Start/End: Complemental strand, 4673412 - 4673354
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||| ||| |||||||| || ||||||||||||| ||||||||| |||||||||||    
T  4673412 acacgacgcatatccgacaccggaacacgcctaatccaaggagtgtctgtgcttcatag 4673354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 421 - 471
Target Start/End: Original strand, 13397620 - 13397670
Alignment:
Q  421 catgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||||||| | |||||||||||| | |||||||||||||||||||||    
T  13397620 catgtccgacaccgagacacgcctaattcaaggagtgtccgtgcttcatag 13397670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 428 - 466
Target Start/End: Complemental strand, 31109501 - 31109463
Alignment:
Q  428 gacacagggacacgcctaatccgaggagtgtccgtgctt 466  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  31109501 gacactgggacacgcctaatccgaggagtgtccgtgctt 31109463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 423 - 469
Target Start/End: Original strand, 44067598 - 44067644
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 469  Q
    ||||||||||  ||||||||||||| |||||||||||||||||||||    
T  44067598 tgtccgacaccaggacacgcctaattcgaggagtgtccgtgcttcat 44067644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 421 - 470
Target Start/End: Complemental strand, 24205798 - 24205749
Alignment:
Q  421 catgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 470  Q
    |||||| ||||| || ||||||||||||||||||||||||||| ||||||    
T  24205798 catgtctgacaccggaacacgcctaatccgaggagtgtccgtgtttcata 24205749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 413 - 470
Target Start/End: Complemental strand, 29447097 - 29447040
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 470  Q
    ||||||||  |||| |||||  ||||||||||||||| ||||||||||||||||||||    
T  29447097 acacgacatgtgtctgacaccaggacacgcctaatcctaggagtgtccgtgcttcata 29447040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 375 - 471
Target Start/End: Complemental strand, 33405418 - 33405324
Alignment:
Q  375 cacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||| ||| |||||||||| | |||| ||||||  | |||||||||||||| |||||  ||||||| ||||||| | ||||||||||||| |||||    
T  33405418 cacataatttagtgtaattatatgtgtcggtgtc--ggacacgacacatgtctgacacctggacacggctaatccaatgagtgtccgtgctccatag 33405324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 423 - 472
Target Start/End: Original strand, 40064033 - 40064082
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcataga 472  Q
    |||||||||| |||||||  ||||||||||||||||||||||| ||||||    
T  40064033 tgtccgacaccgggacacatctaatccgaggagtgtccgtgctacataga 40064082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 436 - 472
Target Start/End: Complemental strand, 11927050 - 11927014
Alignment:
Q  436 gacacgcctaatccgaggagtgtccgtgcttcataga 472  Q
    |||||||||||||||| ||||||||||||||||||||    
T  11927050 gacacgcctaatccgatgagtgtccgtgcttcataga 11927014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 472
Target Start/End: Original strand, 11944736 - 11944796
Alignment:
Q  412 tacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcataga 472  Q
    |||||||||  | |||||||| | |||||||||||||||| |||||| |||||||||||||    
T  11944736 tacacgacatgtatccgacaccgagacacgcctaatccgatgagtgttcgtgcttcataga 11944796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 414 - 466
Target Start/End: Complemental strand, 14639787 - 14639735
Alignment:
Q  414 cacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgctt 466  Q
    ||||||||||||||||||| |||||| ||||||||| |||||| || ||||||    
T  14639787 cacgacacatgtccgacaccgggacatgcctaatccaaggagtatctgtgctt 14639735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 429 - 469
Target Start/End: Original strand, 16987990 - 16988030
Alignment:
Q  429 acacagggacacgcctaatccgaggagtgtccgtgcttcat 469  Q
    |||| ||||||| ||||||||||||||||||||||||||||    
T  16987990 acaccgggacacccctaatccgaggagtgtccgtgcttcat 16988030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 382 - 469
Target Start/End: Complemental strand, 20679422 - 20679337
Alignment:
Q  382 ttcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 469  Q
    ||||||||||||| |||||| ||||||    || | |||| |||||||||| ||||||||||| | ||||||||||||| ||||||||    
T  20679422 ttcagtgtaattataagtgtcggtgtcag--acgcaacacgtgtccgacaccgggacacgccttaaccgaggagtgtccatgcttcat 20679337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 423 - 471
Target Start/End: Original strand, 27213596 - 27213644
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||| ||||| |||||||| |||||||||| ||||||||||||||||||    
T  27213596 tgtcggacaccgggacacggctaatccgagaagtgtccgtgcttcatag 27213644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 470
Target Start/End: Complemental strand, 13009469 - 13009423
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 470  Q
    |||||||||| |||||||||||||||| ||||| ||||||||||||||    
T  13009469 tgtccgacac-gggacacgcctaatccaaggagcgtccgtgcttcata 13009423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 99
Target Start/End: Original strand, 18355755 - 18355798
Alignment:
Q  56 tgataaaaattgattttgaatgaatctattttgtaaaattgatt 99  Q
    ||||||||||||||||||| |||||  |||||||||||||||||    
T  18355755 tgataaaaattgattttgagtgaattgattttgtaaaattgatt 18355798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 322 - 471
Target Start/End: Complemental strand, 22197828 - 22197671
Alignment:
Q  322 cggacacgacacatactctaacacaccgacacagctaataatttnnnnnnnntcacattattcagtgtaattacaagtgt---tg---gtgtcttgt--- 412  Q
    ||||||||||||| || ||||||| || ||||||||||||||||        |||||| ||| |||||||||||||||||   ||   ||||| |||       
T  22197828 cggacacgacacagacactaacacgccaacacagctaataatttgaaaaat-tcacataatttagtgtaattacaagtgtcagtgtcagtgtcgtgtcgg 22197730  T
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||| ||||| |||||||||| ||  ||||||||||| ||||||||||||||||| ||||    
T  22197729 acatgacacgtgtccgacaccggatcacgcctaatctgaggagtgtccgtgctttatag 22197671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 470
Target Start/End: Complemental strand, 43737836 - 43737752
Alignment:
Q  384 cagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 470  Q
    ||||||||||| | |||| ||||||  | ||||||||  |||| ||||| |||| |||||| |||| ||||||||||||||||||||    
T  43737836 cagtgtaattatatgtgtcggtgtc--ggacacgacaggtgtctgacacggggatacgccttatccaaggagtgtccgtgcttcata 43737752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 413 - 463
Target Start/End: Complemental strand, 126345 - 126295
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtg 463  Q
    ||||||||| ||||| | || |||||||| |||||||||||||||||||||    
T  126345 acacgacacgtgtccaataccgggacacggctaatccgaggagtgtccgtg 126295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 436 - 470
Target Start/End: Original strand, 3658237 - 3658271
Alignment:
Q  436 gacacgcctaatccgaggagtgtccgtgcttcata 470  Q
    |||||||||||| ||||||||||||||||||||||    
T  3658237 gacacgcctaattcgaggagtgtccgtgcttcata 3658271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 437 - 471
Target Start/End: Original strand, 11833935 - 11833969
Alignment:
Q  437 acacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||||||||||||||||| |||||||||||    
T  11833935 acacgcctaatccgaggagtgtctgtgcttcatag 11833969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 421 - 471
Target Start/End: Original strand, 13403175 - 13403225
Alignment:
Q  421 catgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||||||| | ||||||| |||| | |||||||||||||||||||||    
T  13403175 catgtccgacaccgagacacgcttaattcaaggagtgtccgtgcttcatag 13403225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 429 - 471
Target Start/End: Complemental strand, 16641951 - 16641909
Alignment:
Q  429 acacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||| ||||||| |||||||||||||||||| |||||||||||    
T  16641951 acaccgggacacacctaatccgaggagtgtctgtgcttcatag 16641909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 413 - 471
Target Start/End: Original strand, 18964251 - 18964309
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||| ||||  |||| | ||||||||| |||||||||||||| |||||||||||    
T  18964251 acacgacacctgtctaacacggagacacgccttatccgaggagtgtctgtgcttcatag 18964309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 374 - 471
Target Start/End: Original strand, 24858036 - 24858135
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgt---acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 470  Q
    |||||| |||||||||||| |||||||| | |||| |||   ||||||||  ||||| || | ||||||||||||||| |||||||||  ||||||||||    
T  24858036 tcacataattcagtgtaat-acaagtgtcgttgtcgtgtcggacacgacatgtgtcccacgccgggacacgcctaatcagaggagtgtttgtgcttcata 24858134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 61 - 103
Target Start/End: Complemental strand, 35550347 - 35550305
Alignment:
Q  61 aaaattgattttgaatgaatctattttgtaaaattgattttta 103  Q
    |||||||||||||| |||||  |||||||||||||||||||||    
T  35550347 aaaattgattttgattgaattgattttgtaaaattgattttta 35550305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 413 - 455
Target Start/End: Complemental strand, 44462193 - 44462151
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggag 455  Q
    |||||| ||||||||||||| |||||||| |||||||||||||    
T  44462193 acacgatacatgtccgacaccgggacacgtctaatccgaggag 44462151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 413 - 455
Target Start/End: Complemental strand, 44469726 - 44469684
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggag 455  Q
    |||||| ||||||||||||| |||||||| |||||||||||||    
T  44469726 acacgatacatgtccgacaccgggacacgtctaatccgaggag 44469684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 101
Target Start/End: Original strand, 2031906 - 2031947
Alignment:
Q  60 aaaaattgattttgaatgaatctattttgtaaaattgatttt 101  Q
    |||||||||||||||| |||| |||||||||||||| |||||    
T  2031906 aaaaattgattttgaaagaatttattttgtaaaatttatttt 2031947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 469
Target Start/End: Complemental strand, 15023285 - 15023199
Alignment:
Q  381 attcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 469  Q
    ||||||||||||||||||||| | ||||  | | ||||||| |||||||  | || ||||| |||||||||||||||||| || |||||    
T  15023285 attcagtgtaattacaagtgtcgatgtc--ggatacgacacgtgtccgatgctggaacacgtctaatccgaggagtgtccatgattcat 15023199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 471
Target Start/End: Complemental strand, 24413536 - 24413499
Alignment:
Q  434 gggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  24413536 gggacacgtctaatccgagaagtgtccgtgcttcatag 24413499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 471
Target Start/End: Complemental strand, 37283792 - 37283755
Alignment:
Q  434 gggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  37283792 gggacacgtctaatccgaggagtgcccgtgcttcatag 37283755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 328
Target Start/End: Complemental strand, 43737929 - 43737900
Alignment:
Q  299 tctatgaagcacggatacagacacggacac 328  Q
    ||||||||||||||||||||||||||||||    
T  43737929 tctatgaagcacggatacagacacggacac 43737900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 415 - 471
Target Start/End: Complemental strand, 949261 - 949205
Alignment:
Q  415 acgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||| |||||||| | ||||| ||||||| ||||| ||| ||||||||||||    
T  949261 acgacacatatccgacaccgagacactcctaatctgaggaatgttcgtgcttcatag 949205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 471
Target Start/End: Original strand, 9383049 - 9383085
Alignment:
Q  435 ggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||||||||| || ||||||||||||||||||    
T  9383049 ggacacgcctaatccaagcagtgtccgtgcttcatag 9383085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 408
Target Start/End: Original strand, 22596020 - 22596052
Alignment:
Q  376 acattattcagtgtaattacaagtgttggtgtc 408  Q
    |||| ||||||||||||||||||||||||||||    
T  22596020 acataattcagtgtaattacaagtgttggtgtc 22596052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 471
Target Start/End: Complemental strand, 27067259 - 27067231
Alignment:
Q  443 ctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||||||||||||||||||||||||    
T  27067259 ctaatccgaggagtgtccgtgcttcatag 27067231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 471
Target Start/End: Complemental strand, 34127208 - 34127172
Alignment:
Q  435 ggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||| |||||||| |||||||||||||||||||||    
T  34127208 ggacacacctaatccaaggagtgtccgtgcttcatag 34127172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 471
Target Start/End: Complemental strand, 38487205 - 38487157
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||||  |||||| | |||||||||||||||| |||||||||||    
T  38487205 tgtccgacacccggacacacataatccgaggagtgtctgtgcttcatag 38487157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 51; Significance: 5e-20; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 413 - 475
Target Start/End: Original strand, 241666 - 241728
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagatta 475  Q
    ||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  241666 acacgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatagatta 241728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 471
Target Start/End: Complemental strand, 236962 - 236914
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||| ||||| ||||||| ||||||| |||||||||| |||||||||||    
T  236962 tgtctgacaccgggacacacctaatctgaggagtgtctgtgcttcatag 236914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 46; Significance: 5e-17; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 413 - 470
Target Start/End: Original strand, 92883 - 92940
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 470  Q
    |||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||    
T  92883 acacgacacatgtcggacacctggacacgcctaatccgaggagtgtccgtgcttcata 92940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 374 - 410
Target Start/End: Original strand, 123652 - 123688
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtctt 410  Q
    |||||| ||||||||||||||||||||| ||||||||    
T  123652 tcacataattcagtgtaattacaagtgtcggtgtctt 123688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 413 - 471
Target Start/End: Original strand, 8662 - 8720
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||| |||||||||| |||| ||||||||||| |||||||||||||||||||||    
T  8662 acacgacacgtgtccgacactgggatacgcctaatccaaggagtgtccgtgcttcatag 8720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 413 - 471
Target Start/End: Complemental strand, 3836 - 3778
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||||||||||||||  | ||||||||||||||||||||||||| ||||||||||    
T  3836 acacgacacatgtccgacatcgagacacgcctaatccgaggagtgtccttgcttcatag 3778  T

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Target: scaffold0512 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 387 - 471
Target Start/End: Complemental strand, 5058 - 4976
Alignment:
Q  387 tgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||||||||| ||||||  | ||||||||| |||||||||  | |||| ||||||||||||||||||| |||||||||||    
T  5058 tgtaattacaagtgtcggtgtc--ggacacgacacgtgtccgacattgagacatgcctaatccgaggagtgtctgtgcttcatag 4976  T

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Target: scaffold0450 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 413 - 474
Target Start/End: Complemental strand, 8622 - 8561
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagatt 474  Q
    |||||| || |||||||||| || ||||||||||| ||||||||||||||||||||||||||    
T  8622 acacgatacgtgtccgacactggtacacgcctaattcgaggagtgtccgtgcttcatagatt 8561  T

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Target: scaffold0361 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 374 - 472
Target Start/End: Original strand, 14554 - 14647
Alignment:
Q  374 tcacattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcataga 472  Q
    |||||| ||||||||||||||||||||   |||||  | ||||||||| |||||||||| | |||||||||||||  |||||||| |||||||||||||    
T  14554 tcacataattcagtgtaattacaagtg---gtgtc--ggacacgacacgtgtccgacaccgagacacgcctaatcgaaggagtgtacgtgcttcataga 14647  T

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Target: scaffold0050 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 376 - 468
Target Start/End: Original strand, 70304 - 70394
Alignment:
Q  376 acattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttca 468  Q
    |||| |||||||||||||| |||||| ||||||  | ||||||||| ||||||||||  ||||| ||||||||||| |||||| |||||||||    
T  70304 acataattcagtgtaattataagtgtcggtgtc--ggacacgacacgtgtccgacaccaggacatgcctaatccgatgagtgttcgtgcttca 70394  T

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Target: scaffold0171 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 298 - 362
Target Start/End: Original strand, 23369 - 23433
Alignment:
Q  298 atctatgaagcacggatacagacacggacacgacacatactctaacacaccgacacagctaataa 362  Q
    ||||||||||||||||||| ||||||||||||||||| || || |||| ||||||||| ||||||    
T  23369 atctatgaagcacggatacggacacggacacgacacagacactgacacgccgacacagataataa 23433  T

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Target: scaffold0171; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 322 - 401
Target Start/End: Original strand, 23483 - 23562
Alignment:
Q  322 cggacacgacacatactctaacacaccgacacagctaataatttnnnnnnnntcacattattcagtgtaattacaagtgt 401  Q
    |||||||||||||||| || |||||||||||||| |||||| ||        |||||| |||||||||||||| ||||||    
T  23483 cggacacgacacatacactgacacaccgacacagttaataacttaaaaaaaatcacataattcagtgtaattataagtgt 23562  T

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Target: scaffold0475 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 428 - 471
Target Start/End: Original strand, 3384 - 3427
Alignment:
Q  428 gacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||| ||||||||||||||||||||||||||||||||||||||    
T  3384 gacactgggacacgcctaatccgaggagtgtccgtgcttcatag 3427  T

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Target: scaffold0083 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 376 - 474
Target Start/End: Complemental strand, 45563 - 45467
Alignment:
Q  376 acattattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagatt 474  Q
    |||| ||||||||||||||||||||| ||||||  | ||||||||| |||| ||||| | |||| ||||||||| | || ||| |||||||||||||||    
T  45563 acataattcagtgtaattacaagtgtcggtgtc--ggacacgacacgtgtctgacaccgcgacatgcctaatccaaagattgtacgtgcttcatagatt 45467  T

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Target: scaffold0086 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 413 - 471
Target Start/End: Original strand, 3000 - 3058
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||| ||| |||||| || ||||||||||||||||||||||||||||| |||||    
T  3000 acacgacacgtgttcgacaccggaacacgcctaatccgaggagtgtccgtgctccatag 3058  T

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Target: scaffold0019 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 413 - 471
Target Start/End: Original strand, 71797 - 71855
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||| |||| |||||||||| |||||||| ||||||||||||||||| |||||||||||    
T  71797 acacaacacgtgtccgacaccgggacacgactaatccgaggagtgtcggtgcttcatag 71855  T

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Target: scaffold0027 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 436 - 471
Target Start/End: Original strand, 46741 - 46776
Alignment:
Q  436 gacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||||||||||||||||||||||||||||||    
T  46741 gacacgcctaatccgaggagtgtccgtgcttcatag 46776  T

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Target: scaffold0021 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 413 - 471
Target Start/End: Complemental strand, 3036 - 2978
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    |||||||||||||||||||| |  |||||||||||  | ||||||||||||||||||||    
T  3036 acacgacacatgtccgacactgaaacacgcctaatatggggagtgtccgtgcttcatag 2978  T

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Target: scaffold0623 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 413 - 470
Target Start/End: Complemental strand, 5983 - 5926
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 470  Q
    ||||||||| |||| ||||||| ||||||||| |||| |||||||||||||| |||||    
T  5983 acacgacacgtgtctgacacagagacacgccttatccaaggagtgtccgtgcctcata 5926  T

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Target: scaffold0306 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 469
Target Start/End: Original strand, 13350 - 13523
Alignment:
Q  300 ctatgaagcacggatacagacac-ggacacgacacatactctaacacaccgacacagctaataatttnnnnnnnntcacattattcagtgtaattacaag 398  Q
    ||||||||||||||||| ||||| ||| | |||||  || || |||| |||||||| ||||||||||        |||||| |||||||| |||||||||    
T  13350 ctatgaagcacggatacggacaccggagatgacacggacactgacacgccgacacaactaataatttgagaaaa-tcacataattcagtgcaattacaag 13448  T
Q  399 tgttggtgtc----ttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 469  Q
     || ||||||    | | |||||||||  ||| |||||  |||||| |||||||| |||||||||||||||||||    
T  13449 ggtcggtgtcggtgtcggacacgacacgcgtctgacactaggacacacctaatccaaggagtgtccgtgcttcat 13523  T

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Target: scaffold0152 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 469
Target Start/End: Complemental strand, 21977 - 21804
Alignment:
Q  300 ctatgaagcacggatacagacac-ggacacgacacatactctaacacaccgacacagctaataatttnnnnnnnntcacattattcagtgtaattacaag 398  Q
    ||||||||||||||||| ||||| ||| | |||||  || || |||| |||||||| ||||||||||        |||||| |||||||| |||||||||    
T  21977 ctatgaagcacggatacggacaccggagatgacacggacactgacacgccgacacaactaataatttgagaaaa-tcacataattcagtgcaattacaag 21879  T
Q  399 tgttggtgtc----ttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 469  Q
     || ||||||    | | |||||||||  ||| |||||  |||||| |||||||| |||||||||||||||||||    
T  21878 ggtcggtgtcggtgtcggacacgacacgcgtctgacactaggacacacctaatccaaggagtgtccgtgcttcat 21804  T

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Target: scaffold0057 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 435 - 471
Target Start/End: Original strand, 24119 - 24155
Alignment:
Q  435 ggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||||||||||| |||||||||||||||||||    
T  24119 ggacacgcctaatccgatgagtgtccgtgcttcatag 24155  T

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Target: scaffold0036 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 469
Target Start/End: Complemental strand, 9734 - 9678
Alignment:
Q  413 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 469  Q
    ||||||||| |||| ||||  ||||||||  ||||||||||||||||||||||||||    
T  9734 acacgacacttgtctgacatcgggacacgtataatccgaggagtgtccgtgcttcat 9678  T

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Target: scaffold0168 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 436 - 471
Target Start/End: Original strand, 21243 - 21278
Alignment:
Q  436 gacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||||||||||||||| ||||||||||||||    
T  21243 gacacgcctaatccgaggagtatccgtgcttcatag 21278  T

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Target: scaffold0128 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 470
Target Start/End: Original strand, 32775 - 32822
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 470  Q
    |||||||||| ||||||| | |||||||||||||||| ||||||||||    
T  32775 tgtccgacaccgggacacacataatccgaggagtgtcggtgcttcata 32822  T

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Target: scaffold0103 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 470
Target Start/End: Original strand, 51894 - 51941
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 470  Q
    ||||| |||| ||||||||||||||||||||| ||||| |||||||||    
T  51894 tgtccaacaccgggacacgcctaatccgaggaatgtccatgcttcata 51941  T

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Target: scaffold0011 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 422 - 473
Target Start/End: Complemental strand, 17591 - 17540
Alignment:
Q  422 atgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagat 473  Q
    ||||||||||| ||||||||||||||| |  |||| ||||||||||||||||    
T  17591 atgtccgacaccgggacacgcctaatcagctgagtttccgtgcttcatagat 17540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 425 - 464
Target Start/End: Original strand, 188473 - 188512
Alignment:
Q  425 tccgacacagggacacgcctaatccgaggagtgtccgtgc 464  Q
    ||||||||  ||||||||||||||||||||||||||||||    
T  188473 tccgacaccaggacacgcctaatccgaggagtgtccgtgc 188512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 435 - 478
Target Start/End: Complemental strand, 225233 - 225190
Alignment:
Q  435 ggacacgcctaatccgaggagtgtccgtgcttcatagattatta 478  Q
    ||||||||||||| ||||||||||||||||||||| | ||||||    
T  225233 ggacacgcctaattcgaggagtgtccgtgcttcattgcttatta 225190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 428 - 473
Target Start/End: Original strand, 15047 - 15092
Alignment:
Q  428 gacacagggacacgcctaatccgaggagtgtccgtgcttcatagat 473  Q
    ||||| ||||||||||| |||||||||||||  |||||||||||||    
T  15047 gacacggggacacgccttatccgaggagtgtttgtgcttcatagat 15092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 469
Target Start/End: Complemental strand, 263336 - 263303
Alignment:
Q  436 gacacgcctaatccgaggagtgtccgtgcttcat 469  Q
    |||||||||||||||||||||||||||| |||||    
T  263336 gacacgcctaatccgaggagtgtccgtggttcat 263303  T

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Target: scaffold0020 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 471
Target Start/End: Complemental strand, 135311 - 135263
Alignment:
Q  423 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 471  Q
    ||||||||||  |||||||||||||| |||| |||| ||||||||||||    
T  135311 tgtccgacaccaggacacgcctaatctgaggcgtgttcgtgcttcatag 135263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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