View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20993_high_4 (Length: 239)
Name: NF20993_high_4
Description: NF20993
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20993_high_4 |
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Alignment Details
Target: chr4 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 159 - 221
Target Start/End: Complemental strand, 49624703 - 49624641
Alignment:
| Q |
159 |
ccccaatcaaaagtccaccaagagtgctcccgcaaccaatccagctcccactcctattccaac |
221 |
Q |
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| T |
49624703 |
ccccaatcaaaagtccaccaagagtgctccggcaaccaatccagctcccactcctattccaac |
49624641 |
T |
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