View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20993_high_6 (Length: 217)

Name: NF20993_high_6
Description: NF20993
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20993_high_6
NF20993_high_6
[»] chr4 (9 HSPs)
chr4 (17-110)||(18812560-18812653)
chr4 (17-110)||(10032577-10032670)
chr4 (17-72)||(18789219-18789274)
chr4 (17-106)||(8818642-8818731)
chr4 (18-106)||(8678650-8678738)
chr4 (96-167)||(52545202-52545273)
chr4 (104-168)||(24807482-24807546)
chr4 (116-167)||(51295222-51295273)
chr4 (21-94)||(25843550-25843623)
[»] scaffold0245 (2 HSPs)
scaffold0245 (17-110)||(11213-11306)
scaffold0245 (22-110)||(9591-9679)
[»] chr3 (6 HSPs)
chr3 (17-110)||(34143065-34143158)
chr3 (17-110)||(548210-548303)
chr3 (104-168)||(35244112-35244176)
chr3 (104-168)||(35243937-35244001)
chr3 (103-167)||(41874458-41874522)
chr3 (21-110)||(43819835-43819926)
[»] chr1 (4 HSPs)
chr1 (17-110)||(1284946-1285039)
chr1 (18-98)||(35891393-35891473)
chr1 (116-167)||(902136-902187)
chr1 (116-167)||(33773149-33773200)
[»] chr6 (7 HSPs)
chr6 (17-110)||(25050981-25051074)
chr6 (17-66)||(6271320-6271369)
chr6 (116-167)||(14618983-14619034)
chr6 (116-167)||(14611143-14611194)
chr6 (117-168)||(14620559-14620610)
chr6 (64-110)||(6232810-6232856)
chr6 (18-110)||(6257951-6258042)
[»] chr5 (1 HSPs)
chr5 (17-108)||(4897321-4897412)
[»] scaffold0229 (1 HSPs)
scaffold0229 (22-110)||(9919-10007)
[»] chr2 (3 HSPs)
chr2 (104-168)||(25302757-25302821)
chr2 (104-168)||(25306752-25306816)
chr2 (116-168)||(41602397-41602449)
[»] chr7 (1 HSPs)
chr7 (116-167)||(34844111-34844162)
[»] scaffold0006 (1 HSPs)
scaffold0006 (96-165)||(39206-39275)


Alignment Details
Target: chr4 (Bit Score: 90; Significance: 1e-43; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 17 - 110
Target Start/End: Original strand, 18812560 - 18812653
Alignment:
Q  17 gagatgaagatgaagttcataggagaagtaggcattagaggtagaaacaaaagaataatccttgtaattcatattgaattagattgaaaaagat 110  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18812560 gagatgaagatgaagttcataggagaagtaggcatgagaggtagaaacaaaagaataatccttgtaattcatattgaattagattgaaaaagat 18812653  T

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Target: chr4; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 17 - 110
Target Start/End: Original strand, 10032577 - 10032670
Alignment:
Q  17 gagatgaagatgaagttcataggagaagtaggcattagaggtagaaacaaaagaataatccttgtaattcatattgaattagattgaaaaagat 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||    
T  10032577 gagatgaagatgaagttcataggagaagtaggcattagaggtagaaacaaaggaatagtccttgtaattcatattgaattagaatgaaaaagat 10032670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 17 - 72
Target Start/End: Original strand, 18789219 - 18789274
Alignment:
Q  17 gagatgaagatgaagttcataggagaagtaggcattagaggtagaaacaaaagaat 72  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18789219 gagatgaagatgaagttcataggagaagtaggcattagaggtagaaacaaaagaat 18789274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 8818642 - 8818731
Alignment:
Q  17 gagatgaagatgaagttcataggagaagtaggcattagaggtagaaacaaaagaataatccttgtaattcatattgaattagattgaaaa 106  Q
    ||||||||||||||||| ||||||||||||||||| |||| | || ||||| ||||||||||| | ||| |||||||||||||| |||||    
T  8818642 gagatgaagatgaagtttataggagaagtaggcatgagagattgatacaaaggaataatccttatgatttatattgaattagatagaaaa 8818731  T

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Target: chr4; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 18 - 106
Target Start/End: Complemental strand, 8678738 - 8678650
Alignment:
Q  18 agatgaagatgaagttcataggagaagtaggcattagaggtagaaacaaaagaataatccttgtaattcatattgaattagattgaaaa 106  Q
    ||||||||||||| |||||||||||||||||| | | |||||||||  ||  |||||||||||||||||||||| ||||| | ||||||    
T  8678738 agatgaagatgaaattcataggagaagtaggcttgataggtagaaaataagaaataatccttgtaattcatattcaattaaaatgaaaa 8678650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 96 - 167
Target Start/End: Original strand, 52545202 - 52545273
Alignment:
Q  96 tagattga-aaaagatgaataaaatgatacatgaatgtttctatatataaagtttagttgtgtaactaactct 167  Q
    |||||||| ||||||| ||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||    
T  52545202 tagattgataaaagat-aataaaatgatacatgagtgttcctatatatagagtttagttgtgtaactaactct 52545273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 24807546 - 24807482
Alignment:
Q  104 aaaagatgaataaaatgatacatgaatgtttctatatataaagtttagttgtgtaactaactctt 168  Q
    ||||||||| | ||||||||||||| |||| ||||||||| | ||||||||||||||||||||||    
T  24807546 aaaagatgattgaaatgatacatgagtgttcctatatatagattttagttgtgtaactaactctt 24807482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 167
Target Start/End: Complemental strand, 51295273 - 51295222
Alignment:
Q  116 aaatgatacatgaatgtttctatatataaagtttagttgtgtaactaactct 167  Q
    ||||||| ||| | |||| |||||||||| ||||||||||||||||||||||    
T  51295273 aaatgatgcattagtgttcctatatataatgtttagttgtgtaactaactct 51295222  T

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Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 25843623 - 25843550
Alignment:
Q  21 tgaagatgaagttcataggagaagtaggcattagaggtagaaacaaaagaataatccttgtaattcatattgaa 94  Q
    |||| ||||| ||||||||||| ||| || | | ||||||||||||| ||||||||||| |  |||||||||||    
T  25843623 tgaatatgaacttcataggagaggtaagcttgataggtagaaacaaaggaataatccttatgtttcatattgaa 25843550  T

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Target: scaffold0245 (Bit Score: 86; Significance: 3e-41; HSPs: 2)
Name: scaffold0245
Description:

Target: scaffold0245; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 17 - 110
Target Start/End: Complemental strand, 11306 - 11213
Alignment:
Q  17 gagatgaagatgaagttcataggagaagtaggcattagaggtagaaacaaaagaataatccttgtaattcatattgaattagattgaaaaagat 110  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  11306 gagatgaagatgaagttcataggagaagtaggccttagaggtagaaacaaaggaataatccttgtaattcatattgaattagattgaaaaagat 11213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0245; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 22 - 110
Target Start/End: Complemental strand, 9679 - 9591
Alignment:
Q  22 gaagatgaagttcataggagaagtaggcattagaggtagaaacaaaagaataatccttgtaattcatattgaattagattgaaaaagat 110  Q
    |||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  9679 gaagatgaagttcataggagaagtaggccttagaggtagaaacagaggaataatccttgtaattcatattgaattagattgaaaaagat 9591  T

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Target: chr3 (Bit Score: 86; Significance: 3e-41; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 17 - 110
Target Start/End: Complemental strand, 34143158 - 34143065
Alignment:
Q  17 gagatgaagatgaagttcataggagaagtaggcattagaggtagaaacaaaagaataatccttgtaattcatattgaattagattgaaaaagat 110  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  34143158 gagatgaaggtgaagttcataggagaagtaggcattagaggtagaaacaaaggaataatccttgtaattcatattgaattagattgaaaaagat 34143065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 110
Target Start/End: Complemental strand, 548303 - 548210
Alignment:
Q  17 gagatgaagatgaagttcataggagaagtaggcattagaggtagaaacaaaagaataatccttgtaattcatattgaattagattgaaaaagat 110  Q
    |||||||||||||| |||||||||||||| | |||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  548303 gagatgaagatgaacttcataggagaagtggacattagagatagaaacaaaggaataatccttgtaattcatattgaattagaatgaaaaagat 548210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 35244176 - 35244112
Alignment:
Q  104 aaaagatgaataaaatgatacatgaatgtttctatatataaagtttagttgtgtaactaactctt 168  Q
    ||||||||| | ||||||||||||| |||| ||||||||| ||||||||||||||||||||||||    
T  35244176 aaaagatgattgaaatgatacatgagtgttcctatatatagagtttagttgtgtaactaactctt 35244112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 35243937 - 35244001
Alignment:
Q  104 aaaagatgaataaaatgatacatgaatgtttctatatataaagtttagttgtgtaactaactctt 168  Q
    ||||||||| | ||||||||||||| |||| ||||||||| ||||||||||||||| ||||||||    
T  35243937 aaaagatgattgaaatgatacatgagtgttcctatatatagagtttagttgtgtaattaactctt 35244001  T

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Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 103 - 167
Target Start/End: Complemental strand, 41874522 - 41874458
Alignment:
Q  103 aaaaagatgaataaaatgatacatgaatgtttctatatataaagtttagttgtgtaactaactct 167  Q
    |||||||| | | ||||| ||||||| |||| ||||||||| |||||||||||||||||||||||    
T  41874522 aaaaagataattgaaatggtacatgagtgttcctatatatagagtttagttgtgtaactaactct 41874458  T

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Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 110
Target Start/End: Original strand, 43819835 - 43819926
Alignment:
Q  21 tgaagatgaagttcataggagaagtaggcattagaggtagaaacaaaagaataatccttgtaattcatattg--aattagattgaaaaagat 110  Q
    |||||||||| |||||| |||||||| |  | | | || || ||||||||||||||||| ||||||||||||  ||||||| ||||||||||    
T  43819835 tgaagatgaatttcataagagaagtatgattgataagttgatacaaaagaataatccttataattcatattgaaaattagaatgaaaaagat 43819926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 86; Significance: 3e-41; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 17 - 110
Target Start/End: Complemental strand, 1285039 - 1284946
Alignment:
Q  17 gagatgaagatgaagttcataggagaagtaggcattagaggtagaaacaaaagaataatccttgtaattcatattgaattagattgaaaaagat 110  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  1285039 gagatgaagatgaagttcataggagaagtaggccttagaggtagaaacaaaggaataatccttgtaattcatattgaattagattgaaaaagat 1284946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 35891393 - 35891473
Alignment:
Q  18 agatgaagatgaagttcataggagaagtaggcattagaggtagaaacaaaagaataatccttgtaattcatattgaattag 98  Q
    |||| ||| ||||||||||||||||||||| ||| |||||| || ||||| ||||||||||||| ||| ||||||||||||    
T  35891393 agataaaggtgaagttcataggagaagtagacatgagaggttgatacaaaggaataatccttgtcatttatattgaattag 35891473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 167
Target Start/End: Complemental strand, 902187 - 902136
Alignment:
Q  116 aaatgatacatgaatgtttctatatataaagtttagttgtgtaactaactct 167  Q
    ||||||||||||| |||| ||||||| | |||||| ||||||||||||||||    
T  902187 aaatgatacatgagtgttcctatatagagagtttaattgtgtaactaactct 902136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 167
Target Start/End: Complemental strand, 33773200 - 33773149
Alignment:
Q  116 aaatgatacatgaatgtttctatatataaagtttagttgtgtaactaactct 167  Q
    ||||||||||||| ||||  |||||||| |||||||| ||||||||||||||    
T  33773200 aaatgatacatgagtgttcttatatatagagtttagtcgtgtaactaactct 33773149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 7e-39; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 17 - 110
Target Start/End: Complemental strand, 25051074 - 25050981
Alignment:
Q  17 gagatgaagatgaagttcataggagaagtaggcattagaggtagaaacaaaagaataatccttgtaattcatattgaattagattgaaaaagat 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||    
T  25051074 gagatgaagatgaagttcataggagaagtaggcattagaggtagaaacaaaggaataatctttgtaattcatattgaattaaattgaaaaagat 25050981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 6271320 - 6271369
Alignment:
Q  17 gagatgaagatgaagttcataggagaagtaggcattagaggtagaaacaa 66  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6271320 gagatgaagatgaagttcataggagaagtaggcattagaggtagaaacaa 6271369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 116 - 167
Target Start/End: Complemental strand, 14619034 - 14618983
Alignment:
Q  116 aaatgatacatgaatgtttctatatataaagtttagttgtgtaactaactct 167  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||||    
T  14619034 aaatgatacatgagtgttcctatatatagagtttagttgtgtaactaactct 14618983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 167
Target Start/End: Complemental strand, 14611194 - 14611143
Alignment:
Q  116 aaatgatacatgaatgtttctatatataaagtttagttgtgtaactaactct 167  Q
    |||||||||| || |||| ||||||||| |||||||||||||||||||||||    
T  14611194 aaatgatacacgagtgttcctatatatagagtttagttgtgtaactaactct 14611143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 168
Target Start/End: Complemental strand, 14620610 - 14620559
Alignment:
Q  117 aatgatacatgaatgtttctatatataaagtttagttgtgtaactaactctt 168  Q
    |||||||||||| | || ||||||||| ||||||||||||||||||||||||    
T  14620610 aatgatacatgagttttcctatatatagagtttagttgtgtaactaactctt 14620559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 64 - 110
Target Start/End: Complemental strand, 6232856 - 6232810
Alignment:
Q  64 caaaagaataatccttgtaattcatattgaattagattgaaaaagat 110  Q
    ||||||||||||||||||  |||||||||||||||||||| ||||||    
T  6232856 caaaagaataatccttgtgtttcatattgaattagattgataaagat 6232810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 6258042 - 6257951
Alignment:
Q  18 agatgaagatgaagttcataggagaagtaggcattagaggtagaaacaaaagaataatccttgtaattcatattgaattagattgaaaaagat 110  Q
    ||||||||||||| |||||||||||||||||| | | || | || ||||| ||||| ||||| |  ||||||||| |||||||||||| ||||    
T  6258042 agatgaagatgaatttcataggagaagtaggcttgatagcttgatacaaaggaatactccttatgtttcatattg-attagattgaaagagat 6257951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 108
Target Start/End: Original strand, 4897321 - 4897412
Alignment:
Q  17 gagatgaagatgaagttcataggagaagtaggcattagaggtagaaacaaaagaataatccttgtaattcatattgaattagattgaaaaag 108  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  4897321 gagatgaagatgaacttcataggagaagtaggcattagaggtagaaacaaaggaataatccttgtaattcatattgaattagaatgaaaaag 4897412  T

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Target: scaffold0229 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 22 - 110
Target Start/End: Complemental strand, 10007 - 9919
Alignment:
Q  22 gaagatgaagttcataggagaagtaggcattagaggtagaaacaaaagaataatccttgtaattcatattgaattagattgaaaaagat 110  Q
    |||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  10007 gaagatgaagttcataggagaagtaggccttagaggtagaaacagaggaataatccttgtaattcatattgaattagattgaaaaagat 9919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 25302821 - 25302757
Alignment:
Q  104 aaaagatgaataaaatgatacatgaatgtttctatatataaagtttagttgtgtaactaactctt 168  Q
    ||||||||| | ||||||||||||| || | ||||||||| ||||||||||||||||||||||||    
T  25302821 aaaagatgattgaaatgatacatgagtgatcctatatatagagtttagttgtgtaactaactctt 25302757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 25306816 - 25306752
Alignment:
Q  104 aaaagatgaataaaatgatacatgaatgtttctatatataaagtttagttgtgtaactaactctt 168  Q
    ||||||||| | ||||| ||||||| |||| ||||||||| ||||||| ||||||||||||||||    
T  25306816 aaaagatgattgaaatgttacatgagtgttcctatatatagagtttagctgtgtaactaactctt 25306752  T

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Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 168
Target Start/End: Complemental strand, 41602449 - 41602397
Alignment:
Q  116 aaatgatacatgaatgtttctatatataaagtttagttgtgtaactaactctt 168  Q
    ||||||||||||| |||| ||||||||| | ||||||| ||||||||||||||    
T  41602449 aaatgatacatgagtgttcctatatatagaatttagttatgtaactaactctt 41602397  T

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Target: chr7 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 116 - 167
Target Start/End: Complemental strand, 34844162 - 34844111
Alignment:
Q  116 aaatgatacatgaatgtttctatatataaagtttagttgtgtaactaactct 167  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||||    
T  34844162 aaatgatacatgagtgttcctatatatagagtttagttgtgtaactaactct 34844111  T

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Target: scaffold0006 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 96 - 165
Target Start/End: Complemental strand, 39275 - 39206
Alignment:
Q  96 tagattga-aaaagatgaataaaatgatacatgaatgtttctatatataaagtttagttgtgtaactaact 165  Q
    |||||||| ||||||||| | ||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  39275 tagattgataaaagatga-tgaaatgatacatgagtgttcctatatatagagtttagttgtgtaactaact 39206  T

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