View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20995_high_2 (Length: 611)
Name: NF20995_high_2
Description: NF20995
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20995_high_2 |
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Alignment Details
Target: chr7 (Bit Score: 476; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 476; E-Value: 0
Query Start/End: Original strand, 1 - 592
Target Start/End: Original strand, 35628293 - 35628884
Alignment:
| Q |
1 |
ttatgtaactatgaaagagtgagacaattaatccaagtccctagtatagtttatgtannnnnnnnnnnnnnnnnnnnnnnnataggccgattattagtaa |
100 |
Q |
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| T |
35628293 |
ttatgtaactatgaaagagtgagacaattaatccaagtccctagtatagtttatgtagtttttgtttttcttgtttgttttataggcagattattagtaa |
35628392 |
T |
|
| Q |
101 |
tttatttgttagggtgaagaagattggttagcctcagagatcaaatcttgaacttgttagttaaaaaatacttttttgatgtactaacacataccacttg |
200 |
Q |
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| T |
35628393 |
tttatttgttagggtgaagaagattggttagcctcagagatcaaatcttgaacttgttagttaaaaaatacttttttgatgtactaacacataccacttg |
35628492 |
T |
|
| Q |
201 |
aataatcctttggacattcattgttttactttataattctaagtttggcaatctttttcttctttcaagggcaacgttgaattctttgtatttatttcaa |
300 |
Q |
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| T |
35628493 |
aataatcctttggatattcattgttttactttataattctaagtttggcaatctttttcttctttcaagggcaacgttgaattctttgtatttatttcaa |
35628592 |
T |
|
| Q |
301 |
aatttcaatcctgtctctttctcatttgggctgttgaggaaattacatattgaaaccattcaactggggttagagctaaaagaaaatattcacatatgtg |
400 |
Q |
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| T |
35628593 |
aatttcaatcttgtctctttctcatttgggctgctgaggaaattacatattgaaaccattcaactggggttagagctaaaagaaagtattcacatatgtg |
35628692 |
T |
|
| Q |
401 |
acagattattcaatgaccaagagtaagtatttattcattcaaggtcattcacatcaaattacataaccacaaactcctttcataaaaattggaaactata |
500 |
Q |
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| T |
35628693 |
acagattattcaatgaccaagagtaagtatttattcatttaaggtcattcacatcaaattacataaccacaaactcctttaataaaaattggaaactata |
35628792 |
T |
|
| Q |
501 |
gacatttagatttaattccacatacgtagcacaacataaagcagtcaccaactaactttataccattagatgtgcatctcatataccacaat |
592 |
Q |
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|| |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
35628793 |
gaaatttagatttaattccacatacatagcacagcataaagcagtcaccaactaactttataccattagatgtgcacctcatataccacaat |
35628884 |
T |
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