View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21000_low_13 (Length: 265)
Name: NF21000_low_13
Description: NF21000
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21000_low_13 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 10 - 265
Target Start/End: Original strand, 7970909 - 7971164
Alignment:
| Q |
10 |
aagaatatcgcctgaacgcagacccattgatgaagcttcattgatcgagagggcaataattgtggaaagcattccacaattatgggcagataaacataaa |
109 |
Q |
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| T |
7970909 |
aagaaaatcgcctgaacgcagacccattgatgaagcttcattgatcgagagggcaataattgtggaaagcattccacaattatgggcagataaacataaa |
7971008 |
T |
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| Q |
110 |
ccagcttcacttgatggcttcatttgcaacaaacaagaagctcaactactcaaggaattagtatgtttgtgtgttttccaaagttttctgaaatttaagg |
209 |
Q |
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| T |
7971009 |
ccagcttcacttgatggcttcatttgcaacaaacaagaagctcaactactcaaggaattagtatgtttgtgtgttttccaaagttttctgaaatttaagg |
7971108 |
T |
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| Q |
210 |
caaatttgttattaattgtaaattttgaactcggtgtaccttgtttttcaggtgtc |
265 |
Q |
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| T |
7971109 |
caaatttgttattaattgtaaattttgaactcggtgtaccttgtttttcaggtgtc |
7971164 |
T |
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