View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21004_low_30 (Length: 220)

Name: NF21004_low_30
Description: NF21004
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21004_low_30
NF21004_low_30
[»] chr1 (111 HSPs)
chr1 (25-210)||(26010931-26011116)
chr1 (32-209)||(35910396-35910573)
chr1 (35-210)||(33909922-33910097)
chr1 (33-210)||(632645-632822)
chr1 (37-210)||(51977859-51978031)
chr1 (49-210)||(42316848-42317008)
chr1 (25-210)||(33098694-33098878)
chr1 (36-210)||(50239277-50239451)
chr1 (59-167)||(10178895-10179003)
chr1 (63-210)||(48616474-48616622)
chr1 (58-209)||(28791389-28791539)
chr1 (73-209)||(36274754-36274890)
chr1 (74-207)||(52261048-52261181)
chr1 (49-171)||(23304679-23304800)
chr1 (38-168)||(2247319-2247449)
chr1 (35-170)||(7122227-7122362)
chr1 (70-210)||(27353079-27353218)
chr1 (36-171)||(2620945-2621085)
chr1 (62-168)||(11778662-11778768)
chr1 (36-148)||(51184333-51184445)
chr1 (33-170)||(12178871-12179008)
chr1 (58-171)||(26423864-26423976)
chr1 (38-167)||(30547885-30548014)
chr1 (36-158)||(24511863-24511985)
chr1 (59-153)||(41541501-41541595)
chr1 (49-171)||(42647667-42647789)
chr1 (42-171)||(11444277-11444406)
chr1 (59-168)||(2665467-2665578)
chr1 (57-137)||(47718866-47718946)
chr1 (47-171)||(48796300-48796424)
chr1 (36-167)||(34100713-34100844)
chr1 (88-170)||(18992622-18992704)
chr1 (61-158)||(6079618-6079715)
chr1 (36-206)||(9587880-9588050)
chr1 (62-171)||(12979853-12979962)
chr1 (67-171)||(20280492-20280597)
chr1 (42-171)||(26921682-26921811)
chr1 (67-171)||(41550178-41550283)
chr1 (60-164)||(39627852-39627956)
chr1 (34-152)||(30320888-30321007)
chr1 (60-171)||(36672200-36672311)
chr1 (121-210)||(47718962-47719050)
chr1 (35-167)||(51610535-51610669)
chr1 (110-156)||(20487643-20487689)
chr1 (97-171)||(33234116-33234190)
chr1 (97-171)||(33771708-33771782)
chr1 (59-157)||(43146708-43146805)
chr1 (67-171)||(29171436-29171541)
chr1 (67-171)||(31571002-31571107)
chr1 (56-157)||(42958861-42958962)
chr1 (74-170)||(9176736-9176832)
chr1 (39-171)||(17525708-17525840)
chr1 (35-171)||(32144668-32144804)
chr1 (67-170)||(44647276-44647380)
chr1 (111-171)||(45427201-45427261)
chr1 (65-152)||(52180522-52180610)
chr1 (30-152)||(12105154-12105277)
chr1 (97-168)||(28094840-28094911)
chr1 (58-168)||(44979147-44979257)
chr1 (68-171)||(46918655-46918756)
chr1 (59-206)||(32912235-32912380)
chr1 (65-150)||(34038190-34038276)
chr1 (36-157)||(49982456-49982577)
chr1 (59-206)||(51004814-51004960)
chr1 (110-171)||(2090099-2090159)
chr1 (67-171)||(7426691-7426796)
chr1 (67-171)||(9222885-9222990)
chr1 (112-206)||(33986110-33986203)
chr1 (58-171)||(46707366-46707479)
chr1 (110-171)||(48752122-48752183)
chr1 (67-171)||(49739401-49739506)
chr1 (68-171)||(9259848-9259952)
chr1 (36-80)||(23061364-23061408)
chr1 (42-118)||(31216477-31216553)
chr1 (65-152)||(31530336-31530424)
chr1 (36-80)||(35305514-35305558)
chr1 (36-171)||(38261074-38261209)
chr1 (65-152)||(47693491-47693576)
chr1 (60-171)||(5800186-5800297)
chr1 (56-167)||(25081778-25081889)
chr1 (97-210)||(29106426-29106538)
chr1 (97-168)||(29451076-29451147)
chr1 (120-171)||(31890156-31890207)
chr1 (33-80)||(37499104-37499151)
chr1 (65-171)||(42275364-42275471)
chr1 (97-171)||(10635307-10635381)
chr1 (97-171)||(17376626-17376700)
chr1 (97-171)||(22821519-22821593)
chr1 (36-210)||(23056932-23057107)
chr1 (97-171)||(37765315-37765389)
chr1 (97-171)||(40850292-40850366)
chr1 (97-171)||(41321276-41321350)
chr1 (35-152)||(46641806-46641924)
chr1 (97-171)||(48481120-48481194)
chr1 (65-171)||(51991803-51991908)
chr1 (36-171)||(6519987-6520123)
chr1 (36-152)||(24230569-24230686)
chr1 (59-152)||(24452028-24452120)
chr1 (97-170)||(29953733-29953806)
chr1 (64-152)||(30571298-30571387)
chr1 (67-171)||(43224676-43224781)
chr1 (59-152)||(43916370-43916462)
chr1 (97-170)||(48868124-48868197)
chr1 (67-171)||(50502375-50502480)
chr1 (111-171)||(6329324-6329384)
chr1 (115-171)||(23540021-23540077)
chr1 (100-168)||(35242372-35242439)
chr1 (112-168)||(38862436-38862492)
chr1 (97-165)||(43306809-43306877)
chr1 (48-80)||(45673679-45673711)
chr1 (62-158)||(46153258-46153354)
[»] chr2 (77 HSPs)
chr2 (39-209)||(20212156-20212326)
chr2 (39-210)||(11598347-11598518)
chr2 (36-171)||(6513262-6513397)
chr2 (36-210)||(6438172-6438346)
chr2 (36-170)||(34438187-34438321)
chr2 (37-168)||(37909632-37909763)
chr2 (34-171)||(43690020-43690157)
chr2 (38-152)||(33412996-33413110)
chr2 (50-210)||(40370704-40370863)
chr2 (50-210)||(12547596-12547759)
chr2 (36-171)||(32499416-32499551)
chr2 (38-165)||(36489548-36489675)
chr2 (42-210)||(22594969-22595136)
chr2 (98-168)||(19268628-19268698)
chr2 (95-209)||(19636164-19636270)
chr2 (95-209)||(19834757-19834863)
chr2 (35-210)||(3383190-3383366)
chr2 (29-171)||(38073099-38073240)
chr2 (36-171)||(38617728-38617862)
chr2 (42-171)||(15354702-15354832)
chr2 (58-171)||(12071426-12071537)
chr2 (42-171)||(29943826-29943955)
chr2 (42-158)||(3911510-3911626)
chr2 (42-158)||(13119101-13119217)
chr2 (30-171)||(33494205-33494348)
chr2 (47-158)||(13507265-13507376)
chr2 (97-167)||(6588297-6588367)
chr2 (110-171)||(5155768-5155829)
chr2 (31-171)||(34665841-34665981)
chr2 (112-206)||(2283241-2283334)
chr2 (58-158)||(10456069-10456169)
chr2 (48-171)||(26738303-26738427)
chr2 (42-158)||(36430618-36430734)
chr2 (59-171)||(42640874-42640984)
chr2 (37-171)||(1353777-1353911)
chr2 (65-171)||(1580276-1580383)
chr2 (58-198)||(8362424-8362563)
chr2 (58-152)||(15362492-15362585)
chr2 (97-171)||(21425480-21425554)
chr2 (65-171)||(25712748-25712853)
chr2 (67-171)||(5084870-5084975)
chr2 (67-171)||(16814882-16814987)
chr2 (67-171)||(16854162-16854267)
chr2 (112-206)||(25740224-25740317)
chr2 (42-171)||(36023858-36023986)
chr2 (36-171)||(37083480-37083617)
chr2 (59-168)||(37781890-37781998)
chr2 (59-171)||(15205766-15205877)
chr2 (67-171)||(18008986-18009090)
chr2 (67-170)||(35292783-35292887)
chr2 (36-171)||(35895311-35895447)
chr2 (32-167)||(4114659-4114793)
chr2 (41-80)||(15771314-15771353)
chr2 (98-165)||(16637091-16637158)
chr2 (120-171)||(36049549-36049600)
chr2 (97-171)||(6657716-6657790)
chr2 (97-171)||(7504084-7504158)
chr2 (67-206)||(18576331-18576470)
chr2 (48-158)||(36054229-36054339)
chr2 (97-171)||(39878981-39879055)
chr2 (67-171)||(1860198-1860303)
chr2 (67-171)||(2316869-2316974)
chr2 (36-210)||(5389202-5389375)
chr2 (35-80)||(6884524-6884569)
chr2 (36-152)||(9589403-9589520)
chr2 (67-171)||(28394339-28394444)
chr2 (36-152)||(32602303-32602420)
chr2 (67-171)||(40533522-40533627)
chr2 (110-171)||(40588150-40588210)
chr2 (59-152)||(40810709-40810801)
chr2 (59-152)||(41555455-41555547)
chr2 (67-171)||(45555653-45555758)
chr2 (112-165)||(45690575-45690628)
chr2 (29-152)||(9122149-9122273)
chr2 (97-169)||(13450598-13450669)
chr2 (47-167)||(16114475-16114595)
chr2 (139-171)||(21836556-21836588)
[»] chr4 (99 HSPs)
chr4 (36-210)||(47302628-47302802)
chr4 (36-210)||(53695386-53695559)
chr4 (36-206)||(46215772-46215943)
chr4 (34-210)||(56361313-56361489)
chr4 (32-210)||(36091289-36091468)
chr4 (38-210)||(31908674-31908846)
chr4 (36-171)||(31681457-31681592)
chr4 (48-209)||(39161813-39161978)
chr4 (37-171)||(9858520-9858654)
chr4 (49-168)||(30891170-30891289)
chr4 (47-171)||(22413831-22413955)
chr4 (110-210)||(29646852-29646951)
chr4 (36-134)||(46004356-46004453)
chr4 (38-171)||(43958996-43959129)
chr4 (33-158)||(46663610-46663735)
chr4 (36-167)||(30060530-30060661)
chr4 (26-136)||(51282241-51282351)
chr4 (58-171)||(34936577-34936690)
chr4 (49-170)||(55060265-55060386)
chr4 (39-167)||(408338-408466)
chr4 (48-210)||(27539147-27539311)
chr4 (41-167)||(33491606-33491732)
chr4 (42-160)||(34791886-34792004)
chr4 (48-158)||(36188178-36188288)
chr4 (67-171)||(16004564-16004669)
chr4 (42-171)||(16917495-16917624)
chr4 (35-171)||(32570640-32570775)
chr4 (42-171)||(56272849-56272978)
chr4 (42-158)||(17616413-17616529)
chr4 (32-171)||(42881036-42881175)
chr4 (36-170)||(48578907-48579041)
chr4 (47-170)||(49143958-49144081)
chr4 (97-171)||(42080389-42080463)
chr4 (36-158)||(50189297-50189419)
chr4 (42-168)||(54851295-54851421)
chr4 (58-171)||(9579687-9579799)
chr4 (58-171)||(9585382-9585494)
chr4 (110-171)||(46564787-46564848)
chr4 (58-171)||(52940752-52940864)
chr4 (59-171)||(25607714-25607824)
chr4 (42-158)||(27734916-27735032)
chr4 (75-171)||(43363599-43363695)
chr4 (36-80)||(52592155-52592199)
chr4 (37-171)||(41759660-41759794)
chr4 (32-171)||(46549025-46549163)
chr4 (97-171)||(27636011-27636085)
chr4 (58-210)||(30951146-30951297)
chr4 (58-210)||(39512889-39513040)
chr4 (97-167)||(42680660-42680730)
chr4 (35-152)||(45692621-45692739)
chr4 (67-210)||(46630676-46630819)
chr4 (97-167)||(48018404-48018474)
chr4 (58-168)||(50716487-50716597)
chr4 (97-171)||(52257403-52257477)
chr4 (30-171)||(55722748-55722889)
chr4 (59-206)||(34584206-34584351)
chr4 (111-206)||(36631111-36631205)
chr4 (67-171)||(38955073-38955178)
chr4 (59-152)||(43349090-43349182)
chr4 (97-158)||(43518437-43518498)
chr4 (42-171)||(46548633-46548762)
chr4 (27-80)||(47302342-47302395)
chr4 (59-152)||(49286712-49286804)
chr4 (67-171)||(54499845-54499950)
chr4 (110-171)||(56017066-56017127)
chr4 (111-171)||(5970775-5970835)
chr4 (36-80)||(11109596-11109640)
chr4 (57-117)||(18982014-18982073)
chr4 (38-78)||(37855486-37855526)
chr4 (112-171)||(13548481-13548540)
chr4 (26-152)||(24979932-24980058)
chr4 (65-171)||(27761429-27761536)
chr4 (35-171)||(28037955-28038092)
chr4 (36-167)||(37748702-37748833)
chr4 (48-171)||(40319271-40319394)
chr4 (120-171)||(46222077-46222128)
chr4 (33-168)||(48058750-48058885)
chr4 (48-171)||(52104420-52104543)
chr4 (59-93)||(595320-595354)
chr4 (111-206)||(9356457-9356552)
chr4 (65-147)||(22077661-22077742)
chr4 (58-160)||(24347117-24347219)
chr4 (60-158)||(45953936-45954034)
chr4 (122-171)||(1605677-1605726)
chr4 (110-171)||(2443610-2443670)
chr4 (32-152)||(4720760-4720881)
chr4 (67-171)||(10779022-10779127)
chr4 (59-152)||(19527014-19527106)
chr4 (38-75)||(29646958-29646995)
chr4 (181-210)||(30891281-30891310)
chr4 (181-210)||(46004468-46004497)
chr4 (110-171)||(47920546-47920607)
chr4 (181-210)||(48058729-48058758)
chr4 (59-152)||(53973480-53973572)
chr4 (67-170)||(24292250-24292354)
chr4 (111-171)||(32288979-32289039)
chr4 (67-170)||(44998682-44998786)
chr4 (102-158)||(53451764-53451820)
chr4 (97-157)||(55129831-55129891)
[»] chr3 (87 HSPs)
chr3 (36-210)||(21288813-21288987)
chr3 (36-210)||(27647712-27647886)
chr3 (36-209)||(25592012-25592186)
chr3 (48-170)||(3082190-3082312)
chr3 (47-210)||(7672032-7672195)
chr3 (32-210)||(19547720-19547899)
chr3 (47-206)||(788484-788642)
chr3 (39-210)||(29628986-29629156)
chr3 (59-203)||(53516605-53516749)
chr3 (59-169)||(3136535-3136645)
chr3 (36-209)||(4663146-4663320)
chr3 (38-168)||(52082045-52082175)
chr3 (67-210)||(45518868-45519003)
chr3 (59-171)||(43714025-43714137)
chr3 (90-210)||(32717885-32718004)
chr3 (32-163)||(54262540-54262671)
chr3 (58-206)||(19608527-19608675)
chr3 (56-167)||(19914309-19914420)
chr3 (42-158)||(8324672-8324788)
chr3 (33-158)||(8433710-8433835)
chr3 (42-171)||(41902220-41902349)
chr3 (58-171)||(52776472-52776584)
chr3 (36-171)||(1129129-1129265)
chr3 (36-171)||(29806280-29806415)
chr3 (33-171)||(52457945-52458083)
chr3 (66-171)||(23796048-23796153)
chr3 (36-152)||(42478974-42479091)
chr3 (65-152)||(7862734-7862822)
chr3 (36-136)||(9252159-9252259)
chr3 (42-170)||(52178959-52179087)
chr3 (42-158)||(54911032-54911148)
chr3 (36-171)||(8966202-8966337)
chr3 (99-170)||(37626999-37627070)
chr3 (36-167)||(52024438-52024569)
chr3 (36-210)||(38785082-38785256)
chr3 (58-171)||(39252912-39253026)
chr3 (65-198)||(26456982-26457116)
chr3 (49-158)||(41574749-41574858)
chr3 (35-170)||(35375510-35375646)
chr3 (42-157)||(40284196-40284311)
chr3 (97-171)||(881995-882069)
chr3 (36-170)||(5528966-5529100)
chr3 (97-171)||(7347361-7347435)
chr3 (34-80)||(11140607-11140653)
chr3 (58-210)||(32621572-32621723)
chr3 (34-80)||(37492258-37492304)
chr3 (37-79)||(44670260-44670302)
chr3 (67-171)||(26409661-26409765)
chr3 (67-171)||(35352221-35352326)
chr3 (35-171)||(44379413-44379550)
chr3 (67-171)||(49950955-49951060)
chr3 (65-206)||(4817105-4817246)
chr3 (65-152)||(23456747-23456835)
chr3 (35-79)||(39629947-39629991)
chr3 (36-80)||(44365971-44366015)
chr3 (65-152)||(47746118-47746206)
chr3 (42-158)||(53444826-53444942)
chr3 (120-171)||(7157123-7157174)
chr3 (58-157)||(11510740-11510837)
chr3 (37-80)||(42067941-42067984)
chr3 (97-168)||(46868548-46868619)
chr3 (97-206)||(48388821-48388929)
chr3 (120-171)||(53186275-53186326)
chr3 (112-171)||(55418050-55418109)
chr3 (34-80)||(29786531-29786577)
chr3 (97-171)||(35320422-35320496)
chr3 (36-158)||(35748922-35749044)
chr3 (97-171)||(45927491-45927565)
chr3 (97-171)||(50465743-50465817)
chr3 (97-171)||(54009177-54009251)
chr3 (97-171)||(55365436-55365510)
chr3 (181-210)||(3082327-3082356)
chr3 (70-171)||(27102629-27102729)
chr3 (97-170)||(32720258-32720331)
chr3 (112-157)||(34593937-34593982)
chr3 (111-152)||(39678396-39678437)
chr3 (36-152)||(40478048-40478164)
chr3 (99-168)||(41316623-41316692)
chr3 (112-157)||(46936951-46936996)
chr3 (110-171)||(48990565-48990626)
chr3 (130-171)||(50560456-50560497)
chr3 (67-171)||(51235792-51235897)
chr3 (181-210)||(52082167-52082196)
chr3 (67-171)||(52782190-52782295)
chr3 (58-171)||(54831094-54831207)
chr3 (65-152)||(35501079-35501167)
chr3 (32-171)||(42621844-42621984)
[»] scaffold0604 (1 HSPs)
scaffold0604 (37-210)||(2252-2425)
[»] chr7 (68 HSPs)
chr7 (36-210)||(43750308-43750481)
chr7 (42-202)||(20438822-20438982)
chr7 (36-210)||(30936094-30936268)
chr7 (36-210)||(34118703-34118876)
chr7 (36-210)||(18990321-18990494)
chr7 (36-210)||(42975127-42975301)
chr7 (36-210)||(45857475-45857648)
chr7 (58-210)||(11486228-11486379)
chr7 (47-206)||(8770381-8770539)
chr7 (36-165)||(30317465-30317595)
chr7 (34-170)||(44963821-44963957)
chr7 (37-171)||(46836584-46836718)
chr7 (39-150)||(48946361-48946472)
chr7 (64-170)||(41809471-41809577)
chr7 (59-171)||(31482643-31482755)
chr7 (42-210)||(37118340-37118507)
chr7 (42-171)||(24203138-24203267)
chr7 (36-134)||(43069416-43069514)
chr7 (47-171)||(15877345-15877469)
chr7 (36-167)||(43631055-43631186)
chr7 (42-171)||(39925801-39925930)
chr7 (120-206)||(43069314-43069399)
chr7 (58-157)||(13806646-13806744)
chr7 (56-167)||(16086966-16087077)
chr7 (33-171)||(2291051-2291189)
chr7 (69-171)||(23561376-23561478)
chr7 (60-158)||(24189075-24189173)
chr7 (35-210)||(42711162-42711336)
chr7 (58-171)||(1343292-1343404)
chr7 (35-171)||(15591656-15591792)
chr7 (42-170)||(45704507-45704635)
chr7 (35-152)||(7574550-7574668)
chr7 (36-158)||(29982057-29982179)
chr7 (60-158)||(30819733-30819831)
chr7 (66-206)||(31743539-31743677)
chr7 (42-171)||(20883895-20884024)
chr7 (42-171)||(48900518-48900647)
chr7 (47-167)||(41742851-41742971)
chr7 (110-168)||(1583903-1583961)
chr7 (97-171)||(15090939-15091013)
chr7 (35-152)||(28264749-28264867)
chr7 (58-171)||(46879892-46880006)
chr7 (33-158)||(968496-968621)
chr7 (58-171)||(19503142-19503255)
chr7 (112-169)||(40856614-40856671)
chr7 (67-170)||(25867177-25867281)
chr7 (42-158)||(29273266-29273382)
chr7 (36-80)||(40942238-40942282)
chr7 (67-171)||(47068993-47069097)
chr7 (112-171)||(9682103-9682162)
chr7 (36-171)||(15584541-15584676)
chr7 (97-171)||(7574176-7574250)
chr7 (34-80)||(27956647-27956693)
chr7 (58-128)||(37001021-37001091)
chr7 (60-158)||(38034747-38034845)
chr7 (97-171)||(39444236-39444310)
chr7 (97-171)||(40947035-40947109)
chr7 (58-171)||(8577947-8578058)
chr7 (67-171)||(9923341-9923446)
chr7 (59-152)||(21919712-21919804)
chr7 (59-152)||(23182414-23182506)
chr7 (67-171)||(24505394-24505499)
chr7 (112-169)||(27800104-27800161)
chr7 (67-171)||(42902417-42902522)
chr7 (67-171)||(45196835-45196940)
chr7 (67-171)||(47220226-47220331)
chr7 (67-170)||(32186454-32186558)
chr7 (36-80)||(41913096-41913140)
[»] scaffold0113 (1 HSPs)
scaffold0113 (36-210)||(29476-29651)
[»] chr6 (41 HSPs)
chr6 (37-170)||(15383204-15383337)
chr6 (31-209)||(6264938-6265115)
chr6 (37-209)||(17010596-17010767)
chr6 (63-171)||(30020384-30020492)
chr6 (40-171)||(8376024-8376155)
chr6 (58-171)||(20469058-20469171)
chr6 (34-124)||(34195877-34195967)
chr6 (36-171)||(21970578-21970713)
chr6 (58-171)||(7344344-7344456)
chr6 (58-158)||(10091771-10091871)
chr6 (36-167)||(29023619-29023750)
chr6 (36-167)||(31644410-31644541)
chr6 (30-171)||(10887803-10887944)
chr6 (58-210)||(2198015-2198166)
chr6 (35-152)||(1705896-1706013)
chr6 (42-171)||(32715874-32716003)
chr6 (36-152)||(4509720-4509835)
chr6 (36-80)||(6848876-6848920)
chr6 (47-171)||(33610712-33610836)
chr6 (36-158)||(4979100-4979221)
chr6 (58-160)||(26611750-26611852)
chr6 (48-165)||(1096493-1096610)
chr6 (38-170)||(18667689-18667824)
chr6 (82-171)||(32430227-32430316)
chr6 (33-152)||(19473962-19474081)
chr6 (97-206)||(24081207-24081315)
chr6 (34-152)||(14507911-14508029)
chr6 (97-171)||(9226472-9226546)
chr6 (59-206)||(16893135-16893280)
chr6 (67-152)||(18772149-18772235)
chr6 (97-171)||(34315186-34315260)
chr6 (67-171)||(1339125-1339230)
chr6 (67-171)||(18871194-18871299)
chr6 (72-157)||(26315735-26315819)
chr6 (36-80)||(2259266-2259310)
chr6 (111-171)||(9687046-9687106)
chr6 (111-171)||(26958661-26958721)
chr6 (67-170)||(32518778-32518882)
chr6 (36-80)||(32833774-32833818)
chr6 (36-151)||(33574643-33574759)
chr6 (36-151)||(33574821-33574937)
[»] chr5 (70 HSPs)
chr5 (42-210)||(2318431-2318600)
chr5 (36-210)||(12362357-12362532)
chr5 (34-210)||(13795271-13795445)
chr5 (36-210)||(28332353-28332528)
chr5 (36-210)||(13091144-13091319)
chr5 (32-171)||(21051317-21051456)
chr5 (59-206)||(27117951-27118098)
chr5 (40-210)||(9589440-9589610)
chr5 (37-210)||(3425090-3425261)
chr5 (36-210)||(14967462-14967637)
chr5 (42-210)||(41802340-41802507)
chr5 (59-210)||(29744135-29744285)
chr5 (95-210)||(37431409-37431523)
chr5 (59-210)||(35682325-35682477)
chr5 (60-171)||(35817373-35817484)
chr5 (36-158)||(17069269-17069391)
chr5 (27-210)||(34302880-34303064)
chr5 (56-171)||(1490707-1490822)
chr5 (58-167)||(2270806-2270915)
chr5 (29-210)||(22780745-22780926)
chr5 (42-207)||(15264278-15264443)
chr5 (39-167)||(36156116-36156244)
chr5 (39-158)||(1445729-1445848)
chr5 (56-171)||(13645540-13645655)
chr5 (60-171)||(14575497-14575608)
chr5 (97-171)||(25395073-25395147)
chr5 (60-158)||(35777405-35777503)
chr5 (35-171)||(13127251-13127388)
chr5 (35-80)||(13410904-13410949)
chr5 (35-171)||(31588506-31588642)
chr5 (49-169)||(7456221-7456341)
chr5 (39-167)||(10400704-10400832)
chr5 (67-170)||(32624448-32624552)
chr5 (42-158)||(41609369-41609485)
chr5 (65-152)||(13119089-13119176)
chr5 (58-157)||(23408538-23408636)
chr5 (97-171)||(13588926-13589000)
chr5 (96-158)||(33654889-33654951)
chr5 (49-171)||(43167213-43167335)
chr5 (42-171)||(664752-664881)
chr5 (111-168)||(4839521-4839578)
chr5 (36-152)||(6260307-6260424)
chr5 (98-171)||(19126184-19126257)
chr5 (65-152)||(5360015-5360103)
chr5 (48-210)||(14054646-14054807)
chr5 (34-210)||(32467275-32467451)
chr5 (67-170)||(37963025-37963129)
chr5 (65-152)||(9913218-9913305)
chr5 (120-171)||(10453551-10453602)
chr5 (47-158)||(14721338-14721449)
chr5 (131-170)||(31076817-31076856)
chr5 (65-171)||(34259810-34259917)
chr5 (90-164)||(972427-972501)
chr5 (59-157)||(4039493-4039590)
chr5 (97-171)||(28770008-28770082)
chr5 (67-210)||(32063556-32063699)
chr5 (58-115)||(1368081-1368138)
chr5 (98-171)||(2148189-2148262)
chr5 (67-171)||(8068350-8068455)
chr5 (68-157)||(18002684-18002772)
chr5 (110-171)||(20464850-20464910)
chr5 (67-171)||(25684334-25684439)
chr5 (112-169)||(28205047-28205104)
chr5 (67-171)||(31236619-31236724)
chr5 (59-152)||(40756565-40756657)
chr5 (65-152)||(3426079-3426167)
chr5 (65-152)||(9604460-9604548)
chr5 (101-165)||(17465314-17465378)
chr5 (181-209)||(17465498-17465526)
chr5 (49-171)||(36184008-36184129)
[»] chr8 (80 HSPs)
chr8 (36-210)||(37465916-37466089)
chr8 (36-210)||(17642304-17642479)
chr8 (35-171)||(529541-529677)
chr8 (59-171)||(16323829-16323941)
chr8 (50-208)||(39347146-39347303)
chr8 (47-210)||(43049767-43049930)
chr8 (81-210)||(26439568-26439697)
chr8 (38-210)||(43485053-43485224)
chr8 (39-210)||(2273241-2273412)
chr8 (27-167)||(2732066-2732198)
chr8 (33-210)||(13482906-13483080)
chr8 (59-171)||(43921401-43921513)
chr8 (75-170)||(4475304-4475399)
chr8 (50-210)||(36886176-36886335)
chr8 (39-171)||(39029587-39029719)
chr8 (59-168)||(42444264-42444372)
chr8 (82-152)||(19718365-19718435)
chr8 (42-171)||(19725317-19725446)
chr8 (58-171)||(32718977-32719090)
chr8 (48-210)||(43460583-43460744)
chr8 (42-158)||(9178726-9178842)
chr8 (35-167)||(36672009-36672141)
chr8 (42-156)||(12107490-12107604)
chr8 (58-202)||(27970253-27970394)
chr8 (58-171)||(12980284-12980397)
chr8 (42-171)||(36496151-36496280)
chr8 (36-80)||(37511451-37511495)
chr8 (36-171)||(17792475-17792610)
chr8 (36-171)||(31158825-31158960)
chr8 (42-202)||(35754465-35754622)
chr8 (60-158)||(2165037-2165135)
chr8 (97-171)||(3053070-3053144)
chr8 (35-152)||(29454142-29454260)
chr8 (110-171)||(3642945-3643006)
chr8 (97-170)||(18844221-18844294)
chr8 (110-171)||(27100886-27100947)
chr8 (58-171)||(27172185-27172298)
chr8 (98-171)||(29039676-29039749)
chr8 (36-210)||(34332344-34332517)
chr8 (65-152)||(2261303-2261391)
chr8 (47-167)||(6631388-6631508)
chr8 (105-210)||(6799842-6799946)
chr8 (36-86)||(26439509-26439559)
chr8 (67-210)||(36835575-36835718)
chr8 (97-167)||(38803709-38803779)
chr8 (36-210)||(946201-946377)
chr8 (58-171)||(24937607-24937720)
chr8 (36-210)||(28090423-28090596)
chr8 (112-169)||(28885955-28886012)
chr8 (58-171)||(36274586-36274699)
chr8 (36-152)||(38210609-38210726)
chr8 (68-152)||(40776669-40776754)
chr8 (58-171)||(42164930-42165042)
chr8 (65-152)||(7128119-7128207)
chr8 (59-171)||(31893357-31893468)
chr8 (63-151)||(34047444-34047531)
chr8 (36-80)||(39170998-39171042)
chr8 (120-171)||(196151-196202)
chr8 (120-171)||(310988-311039)
chr8 (37-80)||(23286927-23286970)
chr8 (97-171)||(1426389-1426463)
chr8 (97-171)||(12266133-12266207)
chr8 (56-158)||(24377586-24377688)
chr8 (36-210)||(29459866-29460041)
chr8 (97-171)||(32238207-32238280)
chr8 (97-171)||(45393508-45393582)
chr8 (101-158)||(4471509-4471566)
chr8 (110-171)||(12180192-12180253)
chr8 (110-171)||(12424620-12424681)
chr8 (112-169)||(12801379-12801436)
chr8 (181-210)||(19718462-19718491)
chr8 (59-206)||(38764762-38764907)
chr8 (65-170)||(40547720-40547824)
chr8 (98-171)||(41571782-41571855)
chr8 (181-210)||(42444364-42444393)
chr8 (36-210)||(44935131-44935304)
chr8 (65-152)||(118099-118187)
chr8 (36-80)||(29229176-29229220)
chr8 (65-152)||(37675966-37676054)
chr8 (97-165)||(38502467-38502535)
[»] scaffold0625 (1 HSPs)
scaffold0625 (36-210)||(6266-6439)
[»] scaffold0008 (2 HSPs)
scaffold0008 (56-171)||(45344-45459)
scaffold0008 (42-158)||(262831-262947)
[»] scaffold0667 (1 HSPs)
scaffold0667 (33-170)||(104-242)
[»] scaffold0460 (1 HSPs)
scaffold0460 (110-156)||(8632-8678)
[»] scaffold0060 (1 HSPs)
scaffold0060 (110-171)||(46033-46094)
[»] scaffold0059 (1 HSPs)
scaffold0059 (42-158)||(70700-70816)
[»] scaffold0174 (1 HSPs)
scaffold0174 (39-170)||(32799-32930)
[»] scaffold0077 (2 HSPs)
scaffold0077 (36-210)||(48242-48415)
scaffold0077 (36-80)||(58126-58170)
[»] scaffold0190 (1 HSPs)
scaffold0190 (42-158)||(5704-5820)
[»] scaffold0194 (1 HSPs)
scaffold0194 (120-170)||(17582-17632)
[»] scaffold0271 (1 HSPs)
scaffold0271 (31-115)||(16987-17072)
[»] scaffold0022 (1 HSPs)
scaffold0022 (67-171)||(166450-166555)
[»] scaffold0493 (1 HSPs)
scaffold0493 (67-170)||(1659-1763)
[»] scaffold0283 (1 HSPs)
scaffold0283 (36-80)||(6600-6644)
[»] scaffold0005 (1 HSPs)
scaffold0005 (97-149)||(271031-271083)


Alignment Details
Target: chr1 (Bit Score: 133; Significance: 3e-69; HSPs: 111)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 25 - 210
Target Start/End: Original strand, 26010931 - 26011116
Alignment:
Q  25 ttttttattttgggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataa 124  Q
    |||||| |||| ||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  26010931 tttttttttttaggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaaactttaaattaactattatttttatggaataa 26011030  T
Q  125 agagctatttgttgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||       ||||||||||||||||||||||||||||||||    
T  26011031 agagctatttgttgatatttatattttagaaaatgtcattttataagaaaaaaacgtcatttcattgtttataaaaatcatactaa 26011116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 32 - 209
Target Start/End: Complemental strand, 35910573 - 35910396
Alignment:
Q  32 ttttgggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagcta 131  Q
    |||||||||||||| ||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||    
T  35910573 ttttgggaacttctacggtacacccgtaaattaaagtgtatcggtactcctacttcaaaaatctttaaattaactattatttttatagaataaagagtta 35910474  T
Q  132 tttgttgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatacta 209  Q
    |||||||||||||||||||||||||||||||||| |||||       |||||||||||||||||||||||||||||||    
T  35910473 tttgttgatatttatattttagaaaatgtcattttataagaaaaaaacgtcatttcattgtttataaaaatcatacta 35910396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 35 - 210
Target Start/End: Complemental strand, 33910097 - 33909922
Alignment:
Q  35 tgggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctattt 134  Q
    |||||| |||| ||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  33910097 tgggaatttctacggtacacccacaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactattgtttttatggaataaagagctattt 33909998  T
Q  135 gttgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    ||||||||||||||||||||||||||||||| |||||       |||||||||||||||||||||||| |||||||    
T  33909997 gttgatatttatattttagaaaatgtcattttataagaaaaaaacgtcatttcattgtttataaaaataatactaa 33909922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 33 - 210
Target Start/End: Original strand, 632645 - 632822
Alignment:
Q  33 tttgggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctat 132  Q
    ||||||||||||| ||| ||| ||| ||||||||||| |||| |||| ||||||||||||  |||||||||||||| ||||||||||||||||||| |||    
T  632645 tttgggaacttctacggcacacccgcaaattaaggtgaaccgatacttctacttcaaaaaattttaaattaactattatttttatggaataaagagttat 632744  T
Q  133 ttgttgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    |||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||    
T  632745 ttgttgatatttatattttagaaaatgtcatttcataagaaaaaaacgtcatttcattgtttataaaaatcatactaa 632822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 37 - 210
Target Start/End: Original strand, 51977859 - 51978031
Alignment:
Q  37 ggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgt 136  Q
    ||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  51977859 ggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactattatttttatggaataaagagttatttgt 51977958  T
Q  137 tgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    |||| |||||||||||| |||||||||||||||||       | |||||||||||||||||| |||||||||||    
T  51977959 tgatgtttatattttaggaaatgtcatttcataag-aaaaaacatcatttcattgtttataacaatcatactaa 51978031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 49 - 210
Target Start/End: Original strand, 42316848 - 42317008
Alignment:
Q  49 gtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatat 148  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||| |||    
T  42316848 gtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaaataactattatttttatggaataaagtgctatttgttgatatttttat 42316947  T
Q  149 tttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    |||  ||||||||||||||||||       | ||||||||||||||||||||||||||||||    
T  42316948 ttttaaaaatgtcatttcataag-aaaaaacatcatttcattgtttataaaaatcatactaa 42317008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 25 - 210
Target Start/End: Original strand, 33098694 - 33098878
Alignment:
Q  25 ttttttattttgggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataa 124  Q
    ||||||||||  ||||||||| ||||||| ||  ||||||||||||| | ||| || ||||| ||||||||||||||||||||| |||||||||||||||    
T  33098694 ttttttatttatggaacttctacggtacacccacaaattaaggtgtatcagtattcatactttaaaaatctttaaattaactattatttttatggaataa 33098793  T
Q  125 agagctatttgttgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    ||| ||||||||||||||||||||||||||||| |||||||||||||         ||||||||||||||||||||||||||||||    
T  33098794 agaactatttgttgatatttatattttagaaaaagtcatttcataagaaaaaat-atcatttcattgtttataaaaatcatactaa 33098878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 36 - 210
Target Start/End: Original strand, 50239277 - 50239451
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttg 135  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||| |||||||||||| | |||||||||||| ||||||||| |||||| |  |||||     
T  50239277 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcttacttcaaaaatttataaattaactatcatttttatgaaataaaaaaatattta 50239376  T
Q  136 ttgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    ||||||||||||||||| ||||| ||||||||||||       | ||||||||||||||||||||||||||||||    
T  50239377 ttgatatttatattttaaaaaatatcatttcataagaaaaaagcatcatttcattgtttataaaaatcatactaa 50239451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 59 - 167
Target Start/End: Original strand, 10178895 - 10179003
Alignment:
Q  59 aaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaat 158  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  10178895 aaattaaggtgtatcggtactcctactttaaaaatctttaaattaactattatttttatggaataaagaggtatttgttgatatttatattttagaaaat 10178994  T
Q  159 gtcatttca 167  Q
     ||||||||    
T  10178995 atcatttca 10179003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 63 - 210
Target Start/End: Original strand, 48616474 - 48616622
Alignment:
Q  63 taaggtgtaccggtact--cctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgt 160  Q
    |||||||||| ||||||  ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  48616474 taaggtgtactggtactttcctacttcaaaaatctttaaattaattattatttttatggaataaagagctatttgttgatatttgtattttagaaaatgt 48616573  T
Q  161 catttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    |||||||| ||       | ||||||||||||||||||||||||||||||    
T  48616574 catttcattag-aaaaaacatcatttcattgtttataaaaatcatactaa 48616622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 58 - 209
Target Start/End: Original strand, 28791389 - 28791539
Alignment:
Q  58 taaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaa 157  Q
    |||||||| || || || ||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||    
T  28791389 taaattaaagtatatcgatactcctacttcaaaaatctttaaattaactattatttttatagaataaagagttatttgttgatatttatattttagaaaa 28791488  T
Q  158 tgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatacta 209  Q
    |||||||| ||||        |||||||||||||||||||||||| ||||||    
T  28791489 tgtcattttataa-aaaaaaacgtcatttcattgtttataaaaatgatacta 28791539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 73 - 209
Target Start/End: Original strand, 36274754 - 36274890
Alignment:
Q  73 cggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataagn 172  Q
    |||||||| ||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  36274754 cggtactcatacttaaaaaatctttaaattaactattagttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataaaa 36274853  T
Q  173 nnnnnncgtcatttcattgtttataaaaatcatacta 209  Q
          | |||||||||||||||||||| | ||||||    
T  36274854 aaaaaacatcatttcattgtttataaaagtaatacta 36274890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 74 - 207
Target Start/End: Complemental strand, 52261181 - 52261048
Alignment:
Q  74 ggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataagnn 173  Q
    ||||||| | ||||||||||||||||||||||||| ||||| || || ||||||| ||||||||||||||||||||||||||||||||||||||||||      
T  52261181 ggtactcatgcttcaaaaatctttaaattaactattattttaatagattaaagagttatttgttgatatttatattttagaaaatgtcatttcataagaa 52261082  T
Q  174 nnnnncgtcatttcattgtttataaaaatcatac 207  Q
         | |||||||||||||||||||||||||||    
T  52261081 aaaaacatcatttcattgtttataaaaatcatac 52261048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 49 - 171
Target Start/End: Complemental strand, 23304800 - 23304679
Alignment:
Q  49 gtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatat 148  Q
    ||||| |||||||||||| ||||||||||||| |||||||||||| | |||||||||||| ||||||||| |||||| ||||||||||||||||||||||    
T  23304800 gtacacccgtaaattaagatgtaccggtactcttacttcaaaaatttataaattaactattatttttatgaaataaa-agctatttgttgatatttatat 23304702  T
Q  149 tttagaaaatgtcatttcataag 171  Q
    |||||||||| |||||| |||||    
T  23304701 tttagaaaatatcatttaataag 23304679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 38 - 168
Target Start/End: Complemental strand, 2247449 - 2247319
Alignment:
Q  38 gaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgtt 137  Q
    |||||||| ||||||| ||  |||||||||||||||||||||   |||| |||||||| || ||||||||| ||||||||| ||||||||||||||||||    
T  2247449 gaacttctacggtacacccacaaattaaggtgtaccggtactttaactttaaaaatctatatattaactatcatttttatgaaataaagagctatttgtt 2247350  T
Q  138 gatatttatattttagaaaatgtcatttcat 168  Q
    ||||||| ||||||||||||| |||||||||    
T  2247349 gatatttgtattttagaaaatatcatttcat 2247319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 35 - 170
Target Start/End: Complemental strand, 7122362 - 7122227
Alignment:
Q  35 tgggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctattt 134  Q
    ||||||||||| | ||||| ||  || |||| |||||||||||||| |||||||||||| | |||||||||||| ||||||||| |||||| || |||||    
T  7122362 tgggaacttctacagtacacccacaatttaaagtgtaccggtactcttacttcaaaaatttataaattaactatcatttttatgaaataaaaagttattt 7122263  T
Q  135 gttgatatttatattttagaaaatgtcatttcataa 170  Q
    ||||||| || ||||||||||||| |||||| ||||    
T  7122262 gttgatacttgtattttagaaaatatcattttataa 7122227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 70 - 210
Target Start/End: Complemental strand, 27353218 - 27353079
Alignment:
Q  70 taccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcata 169  Q
    ||||||||||| ||||| |||||||| |||||||||||| ||||||||  ||||||||||||||| ||||||||| ||||||||||||| | |||| |||    
T  27353218 taccggtactcttactttaaaaatctataaattaactattatttttataaaataaagagctatttattgatatttgtattttagaaaatataattttata 27353119  T
Q  170 agnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    ||         ||||||||||||||||||||||||||||||    
T  27353118 agaaaaaat-atcatttcattgtttataaaaatcatactaa 27353079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 36 - 171
Target Start/End: Complemental strand, 2621085 - 2620945
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgta-----ccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagct 130  Q
    |||||||||| ||||||| | | |||||||||||||      ||||||||| |||| |||||  ||||||||||| || |||||||||||||||||| ||    
T  2621085 gggaacttctacggtacacctgcaaattaaggtgtatcggtacggtactcccactttaaaaaaatttaaattaacaattatttttatggaataaagaact 2620986  T
Q  131 atttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    |||||||||||||||||||||||||||| | |||| |||||    
T  2620985 atttgttgatatttatattttagaaaattttattttataag 2620945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 62 - 168
Target Start/End: Original strand, 11778662 - 11778768
Alignment:
Q  62 ttaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtc 161  Q
    |||||||||| || ||||| |||||||||||| | |||||||||||| ||||||||| |||||| || |||| |||||||||| ||||||| ||||| ||    
T  11778662 ttaaggtgtatcgatactcttacttcaaaaatttataaattaactatcatttttatgaaataaaaagttattcgttgatatttttattttaaaaaatatc 11778761  T
Q  162 atttcat 168  Q
    |||||||    
T  11778762 atttcat 11778768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 36 - 148
Target Start/End: Complemental strand, 51184445 - 51184333
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttg 135  Q
    ||||||||||  |||||| ||  || ||||||||| ||||||||| |||||||||||| | |||||||||||| ||||||||| |||||| || ||||||    
T  51184445 gggaacttctatggtacacccacaatttaaggtgtgccggtactcttacttcaaaaatttataaattaactatcatttttatgaaataaaaagttatttg 51184346  T
Q  136 ttgatatttatat 148  Q
    ||||||| |||||    
T  51184345 ttgatatatatat 51184333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 33 - 170
Target Start/End: Complemental strand, 12179008 - 12178871
Alignment:
Q  33 tttgggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctat 132  Q
    ||||||||||| | |||||||  || ||||| |||||||||||||||| | ||||  |||||| ||||||||| || | ||||||| |||||| || |||    
T  12179008 tttgggaacttttacggtacactcgcaaattgaggtgtaccggtactcttgcttcctaaatctataaattaacgattaattttatgaaataaatagttat 12178909  T
Q  133 ttgttgatatttatattttagaaaatgtcatttcataa 170  Q
    |||  || |||||||||||||||||| | |||||||||    
T  12178908 ttgccgacatttatattttagaaaatattatttcataa 12178871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 58 - 171
Target Start/End: Original strand, 26423864 - 26423976
Alignment:
Q  58 taaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaa 157  Q
    |||||||||||||||||||||||||||||||||||| | ||| ||||  || | ||||||| ||||||||| ||||  | ||||||||||||||||||||    
T  26423864 taaattaaggtgtaccggtactcctacttcaaaaatttataatttaataatta-ttttatgaaataaagagttattcatcgatatttatattttagaaaa 26423962  T
Q  158 tgtcatttcataag 171  Q
      |||||| |||||    
T  26423963 catcattttataag 26423976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 38 - 167
Target Start/End: Complemental strand, 30548014 - 30547885
Alignment:
Q  38 gaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgtt 137  Q
    |||||||| |||||||  |||||||| |||||||| ||||||| | ||||| |||||| |||| |||| || | ||||||| |||||| || |||||||     
T  30548014 gaacttctacggtacactcgtaaattgaggtgtacaggtactcttgcttcataaatctataaactaacgatcaattttatgaaataaatagttatttgtc 30547915  T
Q  138 gatatttatattttagaaaatgtcatttca 167  Q
    || |||||||||||||||||| | ||||||    
T  30547914 gacatttatattttagaaaatatgatttca 30547885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 36 - 158
Target Start/End: Complemental strand, 24511985 - 24511863
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttg 135  Q
    ||||| |||| |||||||  |||||||| |||||||||||||||| | ||||| |||| | |||| |||| || | ||||||| |||||| || ||||||    
T  24511985 gggaatttctacggtacactcgtaaattgaggtgtaccggtactcttgcttcataaatttataaactaacgatcaattttatgaaataaatagttatttg 24511886  T
Q  136 ttgatatttatattttagaaaat 158  Q
    |||  ||||||||||||||||||    
T  24511885 ttggcatttatattttagaaaat 24511863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 59 - 153
Target Start/End: Original strand, 41541501 - 41541595
Alignment:
Q  59 aaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttag 153  Q
    ||||| |||||||||||||||| | ||||| |||| | | ||||||| || ||||||||| |||||||||||||||||  |||||||||||||||    
T  41541501 aaattgaggtgtaccggtactcttgcttcataaatttatgaattaacgatcatttttatgaaataaagagctatttgtcaatatttatattttag 41541595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 49 - 171
Target Start/End: Complemental strand, 42647789 - 42647667
Alignment:
Q  49 gtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatat 148  Q
    ||||| || ||||||||||||||||||||| |||  |||| |||||  ||| |||| ||| ||||||||| || ||||||||| |||| ||  |||||||    
T  42647789 gtacacccttaaattaaggtgtaccggtacacctgtttcataaatcaataagttaaatatcatttttatgtaacaaagagctacttgtcgacttttatat 42647690  T
Q  149 tttagaaaatgtcatttcataag 171  Q
    |||||||||| | ||||||||||    
T  42647689 tttagaaaatattatttcataag 42647667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 42 - 171
Target Start/End: Original strand, 11444277 - 11444406
Alignment:
Q  42 ttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgata 141  Q
    |||| ||||||| || ||||||||| ||||||||||| |||| |||| |||||  ||| ||||  || ||||||||| |||||| || ||||||||||      
T  11444277 ttctacggtacacccttaaattaagatgtaccggtacacctatttcataaatcaataagttaatgattatttttatgtaataaatagatatttgttgact 11444376  T
Q  142 tttatattttagaaaatgtcatttcataag 171  Q
    ||||||||||||||||| | |||| |||||    
T  11444377 tttatattttagaaaatattattttataag 11444406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 59 - 168
Target Start/End: Complemental strand, 2665578 - 2665467
Alignment:
Q  59 aaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagc--tatttgttgatatttatattttagaaa 156  Q
    |||||||||||||||  | ||| |||||| ||||| | ||||||||| || ||||||||| ||||||||||  ||||||| || |||||||| |||||||    
T  2665578 aaattaaggtgtaccaatgctcttacttccaaaatatataaattaacgatcatttttatgaaataaagagctatatttgtcgacatttatatcttagaaa 2665479  T
Q  157 atgtcatttcat 168  Q
    || |||||||||    
T  2665478 atatcatttcat 2665467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 57 - 137
Target Start/End: Original strand, 47718866 - 47718946
Alignment:
Q  57 gtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgtt 137  Q
    |||||||||||||||| ||||||| || || |||||||| |||||||| ||| || |||||| ||||||||||||||||||    
T  47718866 gtaaattaaggtgtactggtactcttattttaaaaatctataaattaattatcatctttatgaaataaagagctatttgtt 47718946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 47 - 171
Target Start/End: Complemental strand, 48796424 - 48796300
Alignment:
Q  47 cggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttat 146  Q
    |||||||  |||||| | |||||||||||||||| | | ||  |||||| ||||||||  || | ||||||| |||||| || ||||||| || ||||||    
T  48796424 cggtacactcgtaaaatgaggtgtaccggtactcttccatcccaaatctataaattaatgatcaattttatgaaataaatagttatttgtcgacatttat 48796325  T
Q  147 attttagaaaatgtcatttcataag 171  Q
    |||||||||||| ||||||||||||    
T  48796324 attttagaaaatatcatttcataag 48796300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 36 - 167
Target Start/End: Original strand, 34100713 - 34100844
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttg 135  Q
    ||||||||||  ||||||   ||||||| |||||||||||||||  | ||||| |||||| |||| |||| || | ||||||| |||||| || ||||||    
T  34100713 gggaacttctatggtacacttgtaaattgaggtgtaccggtactattgcttcataaatctataaactaacgatcaattttatgaaataaatagttatttg 34100812  T
Q  136 ttgatatttatattttagaaaatgtcatttca 167  Q
    | || |||||||||||||||||| | ||||||    
T  34100813 tcgacatttatattttagaaaatatgatttca 34100844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 88 - 170
Target Start/End: Complemental strand, 18992704 - 18992622
Alignment:
Q  88 aaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataa 170  Q
    |||||| | |||||||||||| ||||||||  ||||| ||| |||||| || ||||||||||||||||||| |||||||||||    
T  18992704 aaaaatttataaattaactatcatttttataaaataaggagttatttgctggtatttatattttagaaaatatcatttcataa 18992622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 61 - 158
Target Start/End: Original strand, 6079618 - 6079715
Alignment:
Q  61 attaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaat 158  Q
    ||||||||||||| |||| |||| |||| |||||| ||| ||||| ||||||||||||  |||||||| ||||| |  || |||||||||||||||||    
T  6079618 attaaggtgtaccagtacacctatttcataaatctataagttaacgataatttttatgtgataaagagatatttatcaatctttatattttagaaaat 6079715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 36 - 206
Target Start/End: Complemental strand, 9588050 - 9587880
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataat-ttttatggaataaagagctattt 134  Q
    |||||||||| |||||||  | |||| | |||| ||||||||||||| ||||| || | | ||||||||  || || ||||||| |||||| ||||||||    
T  9588050 gggaacttctacggtacactcataaagtgaggtataccggtactcctgcttcataattttataaattaatgattatcttttatgaaataaatagctattt 9587951  T
Q  135 gttgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcata 206  Q
    ||| |||||||||||||| | ||  ||||||||||||       | |||||||||||||||||| |||||||    
T  9587950 gttaatatttatattttacagaacatcatttcataag-agaaaacatcatttcattgtttataagaatcata 9587880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 62 - 171
Target Start/End: Complemental strand, 12979962 - 12979853
Alignment:
Q  62 ttaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtc 161  Q
    ||||| ||||||||||| |||| |||| |||||  ||| ||||  || ||||||||| ||||||||| ||||||||||  |||||||||| |||||| |     
T  12979962 ttaagatgtaccggtacacctatttcataaatcaataagttaatgattatttttatgtaataaagagatatttgttgacttttatattttggaaaatatt 12979863  T
Q  162 atttcataag 171  Q
    ||||||||||    
T  12979862 atttcataag 12979853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 67 - 171
Target Start/End: Complemental strand, 20280597 - 20280492
Alignment:
Q  67 gtgtaccggtactcctacttcaaaaatctt-taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 165  Q
    |||||||||||||| |  |||| ||| ||| ||||||||| || ||||||||| |||||| || |||||||  ||||||||||||||||||| ||||| |    
T  20280597 gtgtaccggtactcttgtttcacaaaacttataaattaacaatcatttttatgaaataaaaagttatttgtcaatatttatattttagaaaacgtcatat 20280498  T
Q  166 cataag 171  Q
    ||||||    
T  20280497 cataag 20280492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 42 - 171
Target Start/End: Original strand, 26921682 - 26921811
Alignment:
Q  42 ttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgata 141  Q
    |||| ||||||| || |||| |||| ||||||||||| |||| |||| |||||  ||  ||||  || || |||||| ||||||||| ||||||||||      
T  26921682 ttctacggtacacccttaaactaagatgtaccggtacacctatttcataaatcaatacgttaatgattatctttatgtaataaagagatatttgttgact 26921781  T
Q  142 tttatattttagaaaatgtcatttcataag 171  Q
    ||||||||||||||||| | ||||||||||    
T  26921782 tttatattttagaaaatattatttcataag 26921811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 67 - 171
Target Start/End: Original strand, 41550178 - 41550283
Alignment:
Q  67 gtgtaccggtactcctacttcaaaaatctt-taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 165  Q
    |||||||||||||| |  |||| ||| ||| ||||||||| || ||||||||| |||||| || |||||||  ||||||||||||||||||| ||||| |    
T  41550178 gtgtaccggtactcttgtttcacaaaacttataaattaacgattatttttatgaaataaaaagttatttgtcaatatttatattttagaaaacgtcatat 41550277  T
Q  166 cataag 171  Q
    ||||||    
T  41550278 cataag 41550283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 164
Target Start/End: Original strand, 39627852 - 39627956
Alignment:
Q  60 aattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatg 159  Q
    ||||||||||||||  ||| |||| |||| |||||| ||| ||||| ||||||||||||  |||||||| ||||| | ||  |||||||||||||||||     
T  39627852 aattaaggtgtaccaatacacctatttcataaatctataagttaacgataatttttatgtgataaagagatatttatcgacttttatattttagaaaata 39627951  T
Q  160 tcatt 164  Q
    |||||    
T  39627952 tcatt 39627956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 34 - 152
Target Start/End: Original strand, 30320888 - 30321007
Alignment:
Q  34 ttgggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataa-tttttatggaataaagagctat 132  Q
    |||||||||||| |||||||  |||||| |||||||||||| ||||||| ||||  || | | ||||| ||| |||| |||||||| |||||| ||||||    
T  30320888 ttgggaacttctacggtacactcgtaaaataaggtgtaccgatactcctgcttcttaattttataaatgaacgataattttttatgtaataaatagctat 30320987  T
Q  133 ttgttgatatttatatttta 152  Q
    || |  ||||||||||||||    
T  30320988 ttatcaatatttatatttta 30321007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 60 - 171
Target Start/End: Complemental strand, 36672311 - 36672200
Alignment:
Q  60 aattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatg 159  Q
    |||||||||||||| ||||  ||| |||| |||||| ||| ||||| ||||||||||||  |||||||| ||||| | ||  |||||||||||||||||     
T  36672311 aattaaggtgtaccagtacatctatttcataaatctataagttaacgataatttttatgtgataaagagatatttatcgacttttatattttagaaaata 36672212  T
Q  160 tcatttcataag 171  Q
    | || |||||||    
T  36672211 ttatctcataag 36672200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 121 - 210
Target Start/End: Original strand, 47718962 - 47719050
Alignment:
Q  121 ataaagagctatttgttgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    |||||||||||||| ||||||||||||||||| ||||| ||||||||||||       | |||||||||| ||| |||||||||||||||    
T  47718962 ataaagagctatttattgatatttatattttaaaaaatatcatttcataag-gaaaaacatcatttcattatttttaaaaatcatactaa 47719050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 35 - 167
Target Start/End: Original strand, 51610535 - 51610669
Alignment:
Q  35 tgggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctattt 134  Q
    ||||||||||| |||||||| |||||||| ||||||| |||||||| | ||||| |||| | |||| |||| || | ||||||| |||||| || |||||    
T  51610535 tgggaacttctacggtacattcgtaaattgaggtgtatcggtactcttgcttcataaatttataaactaacaatcaattttatgaaataaatagttattt 51610634  T
Q  135 gttg--atatttatattttagaaaatgtcatttca 167  Q
    || |  || | ||||||||||||||| | ||||||    
T  51610635 gtcggcatttatatattttagaaaatatgatttca 51610669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 156
Target Start/End: Original strand, 20487643 - 20487689
Alignment:
Q  110 atttttatggaataaagagctatttgttgatatttatattttagaaa 156  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||    
T  20487643 atttttatgaaataaagagttatttgttgatatttatattttagaaa 20487689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 97 - 171
Target Start/End: Original strand, 33234116 - 33234190
Alignment:
Q  97 taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||||| || ||||||||| |||||| || |||||||  ||||||||||||||||||| ||||| |||||||    
T  33234116 taaattaacgatcatttttatgaaataaaaagttatttgtcaatatttatattttagaaaacgtcatatcataag 33234190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 97 - 171
Target Start/End: Original strand, 33771708 - 33771782
Alignment:
Q  97 taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||||| || ||||||||| |||||| || |||||||  ||||||||||||||||||| ||||| |||||||    
T  33771708 taaattaacgatcatttttatgaaataaaaagttatttgtcaatatttatattttagaaaacgtcatatcataag 33771782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 59 - 157
Target Start/End: Complemental strand, 43146805 - 43146708
Alignment:
Q  59 aaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaa 157  Q
    ||||| |||||||| |||||||||||||||||||| | ||| ||||| || | ||||||| ||||||||| ||||  |  |||||||||||||||||||    
T  43146805 aaattgaggtgtactggtactcctacttcaaaaatttataatttaacgatta-ttttatgaaataaagagttattcatcaatatttatattttagaaaa 43146708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 171
Target Start/End: Complemental strand, 29171541 - 29171436
Alignment:
Q  67 gtgtaccggtactcctacttca-aaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 165  Q
    |||||||||||||| |  |||| ||||| | ||||||||| || | ||| ||| |||||| || |||||||| |||||||||||||||||||  ||||||    
T  29171541 gtgtaccggtactcttgtttcacaaaatttataaattaacgatcactttaatgaaataaaaaggtatttgttaatatttatattttagaaaacatcattt 29171442  T
Q  166 cataag 171  Q
    ||||||    
T  29171441 cataag 29171436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 171
Target Start/End: Original strand, 31571002 - 31571107
Alignment:
Q  67 gtgtaccggtactcctacttca-aaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 165  Q
    |||||||||||||| |  |||| ||||| | ||||||||  || | ||| ||| |||||| || |||||||  |||||||||||||||||||||||||||    
T  31571002 gtgtaccggtactcttgtttcacaaaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaatgtcattt 31571101  T
Q  166 cataag 171  Q
    ||||||    
T  31571102 cataag 31571107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 157
Target Start/End: Original strand, 42958861 - 42958962
Alignment:
Q  56 cgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaa 155  Q
    |||||||| || ||||||||||||| | ||||| |||||| |||| |||| || | ||||||| |||||| || ||||||| |  |||||||||||||||    
T  42958861 cgtaaattgagatgtaccggtactcttgcttcataaatctataaactaacgatcaattttatgaaataaatagttatttgtcggcatttatattttagaa 42958960  T
Q  156 aa 157  Q
    ||    
T  42958961 aa 42958962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 74 - 170
Target Start/End: Original strand, 9176736 - 9176832
Alignment:
Q  74 ggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataa 170  Q
    ||||||| || || |||||| | |||||||||||| |||||||   ||||||||||||||||| | ||||||||  | ||||||| |||||||||||    
T  9176736 ggtactcttattttaaaaatttataaattaactatcatttttacaaaataaagagctatttgtggctatttataagtcagaaaatatcatttcataa 9176832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 39 - 171
Target Start/End: Complemental strand, 17525840 - 17525708
Alignment:
Q  39 aacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttg 138  Q
    |||||||  ||||||| | |||||||||||||| |||||||||| ||||  |||| | || |||||| || | ||||||| |||||| || ||||||| |    
T  17525840 aacttctatggtacattcataaattaaggtgtatcggtactcctgcttcctaaatttatacattaacaatcaattttatgaaataaatagttatttgtcg 17525741  T
Q  139 atatttatattttagaaaatgtcatttcataag 171  Q
      |||||||| | | ||||| ||||||||||||    
T  17525740 gcatttatatctcaaaaaatatcatttcataag 17525708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 171
Target Start/End: Original strand, 32144668 - 32144804
Alignment:
Q  35 tgggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctattt 134  Q
    |||||||||||  ||||||  | |||||||||||||| ||||| |||| |||| ||||| | || |||||| || |  |||||| |||||| || |||||    
T  32144668 tgggaacttctatggtacactcataaattaaggtgtatcggtattcctgcttccaaaatttatatattaacaatcaactttatgaaataaatagttattt 32144767  T
Q  135 gttgatatttatattttagaaaatgtcatttcataag 171  Q
    || |  |||||||| | ||||||| ||||||||||||    
T  32144768 gtcggcatttatatctcagaaaatatcatttcataag 32144804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 67 - 170
Target Start/End: Original strand, 44647276 - 44647380
Alignment:
Q  67 gtgtaccggtactcctacttca-aaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 165  Q
    |||||||||||||| |  |||| ||||| | ||||||||  || ||||| ||| |||||| || |||||||| |||||||||||||||||||  ||||||    
T  44647276 gtgtaccggtactcttgtttcacaaaatatataaattaaagatcattttaatgaaataaaaaggtatttgttaatatttatattttagaaaacatcattt 44647375  T
Q  166 cataa 170  Q
    |||||    
T  44647376 cataa 44647380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 45427201 - 45427261
Alignment:
Q  111 tttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    |||||||| ||||||||| ||||||||||  ||||||||||||||||| | ||||||||||    
T  45427201 tttttatgtaataaagagatatttgttgacttttatattttagaaaatattatttcataag 45427261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 65 - 152
Target Start/End: Complemental strand, 52180610 - 52180522
Alignment:
Q  65 aggtgtaccggtactcctacttcaaaaatctttaaattaactataa-tttttatggaataaagagctatttgttgatatttatatttta 152  Q
    |||||||||||||||||| ||||| || | | ||||||||| |||| |||||||| |||||| ||||||||||  | ||||||||||||    
T  52180610 aggtgtaccggtactcctgcttcataattttataaattaacgataattttttatgtaataaatagctatttgtcaaaatttatatttta 52180522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 152
Target Start/End: Original strand, 12105154 - 12105277
Alignment:
Q  30 tattttgggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataa-tttttatggaataaagag 128  Q
    ||||| |||||||||| |||||||  |  ||| | |||||||||||||||| | ||||| || | | ||||||||| |||| |||||||| |||||| ||    
T  12105154 tatttagggaacttctacggtacactcacaaaatgaggtgtaccggtactcttgcttcataattttataaattaacgataattttttatgtaataaatag 12105253  T
Q  129 ctatttgttgatatttatatttta 152  Q
     |||||||  ||||||||||||||    
T  12105254 ttatttgtcaatatttatatttta 12105277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 168
Target Start/End: Original strand, 28094840 - 28094911
Alignment:
Q  97 taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcat 168  Q
    ||||||||| || ||||||||| |||||| || |||||||  ||||||||||||||||||| ||||| ||||    
T  28094840 taaattaacgattatttttatgaaataaaaagttatttgtcaatatttatattttagaaaacgtcatatcat 28094911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 168
Target Start/End: Complemental strand, 44979257 - 44979147
Alignment:
Q  58 taaattaaggtgtaccggtactcctac-ttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaa 156  Q
    ||||||||||||||| ||||||||||| || |||||| | ||| ||||| || | ||||||| ||||||||| ||||  |  ||||||||||||||||||    
T  44979257 taaattaaggtgtactggtactcctactttaaaaaatttataatttaacgatta-ttttatgaaataaagagttattcatcaatatttatattttagaaa 44979159  T
Q  157 atgtcatttcat 168  Q
    |  |||||||||    
T  44979158 acatcatttcat 44979147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 171
Target Start/End: Complemental strand, 46918756 - 46918655
Alignment:
Q  68 tgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttca 167  Q
    ||||||||||||| | ||||| |||| | ||||||||| || ||||| ||| ||||| |||||||||||  |||||||||||||||||||  ||| ||||    
T  46918756 tgtaccggtactcttgcttcataaatttataaattaacgatcatttt-atgaaataa-gagctatttgtcaatatttatattttagaaaacatcacttca 46918659  T
Q  168 taag 171  Q
    ||||    
T  46918658 taag 46918655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 59 - 206
Target Start/End: Original strand, 32912235 - 32912380
Alignment:
Q  59 aaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaat 158  Q
    ||||| ||||||| ||||||||  |||||| |||| | ||||||||| || ||||| | | |||||| ||||||||||  | ||| |||||||||||||     
T  32912235 aaattgaggtgtatcggtactctcacttcataaatttataaattaacgatcattttaa-gaaataaatagctatttgtcaacatt-atattttagaaaac 32912332  T
Q  159 gtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcata 206  Q
     ||||||||||||       |||||||||||| ||||||| |||||||    
T  32912333 atcatttcataaggaaaaaacgtcatttcattatttataagaatcata 32912380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 65 - 150
Target Start/End: Original strand, 34038190 - 34038276
Alignment:
Q  65 aggtgtaccggtactcctacttcaaaaatctttaaattaactataattttt-atggaataaagagctatttgttgatatttatattt 150  Q
    |||||||||||||||||| ||||| || | | ||||||||| || |||||| ||| |||||| || |||||||| ||||||||||||    
T  34038190 aggtgtaccggtactcctgcttcataattttataaattaacgatcattttttatgaaataaatagttatttgttaatatttatattt 34038276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 49982456 - 49982577
Alignment:
Q  36 gggaacttcttcggtacatc-cgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctattt 134  Q
    |||||||||| ||||||| | | |||||| |||||||||| ||||||| ||  | |||| | ||||||||| || ||||| ||| |||||  ||||||||    
T  49982456 gggaacttctacggtacacctcataaattgaggtgtaccgatactcctgctatataaatttataaattaacaatcatttt-atgaaataagtagctattt 49982554  T
Q  135 gttgatatttatattttagaaaa 157  Q
    ||  |||||||||||||||||||    
T  49982555 gtcaatatttatattttagaaaa 49982577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 59 - 206
Target Start/End: Original strand, 51004814 - 51004960
Alignment:
Q  59 aaattaaggtgtaccggtactcctacttcaaaaatctttaaatt-aactataatttttatggaataaagagctatttgttgatatttatattttagaaaa 157  Q
    ||||| ||||||||||||||||||||||||||||| | ||| || ||| || | ||||||  ||||||||| ||||| |  |||||||||||||| ||||    
T  51004814 aaattgaggtgtaccggtactcctacttcaaaaatttataatttaaacgatta-ttttataaaataaagagttatttataaatatttatattttataaaa 51004912  T
Q  158 tgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcata 206  Q
      |||||| |||||       | |||||||||||||||||| |||||||    
T  51004913 catcattttataag-aaaaaacatcatttcattgtttataagaatcata 51004960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 171
Target Start/End: Complemental strand, 2090159 - 2090099
Alignment:
Q  110 atttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||||| ||||||||||||||| || | |||| ||||||| ||||||||||||||||||    
T  2090159 atttttatgaaataaagagctattt-ttcaaatttttattttataaaatgtcatttcataag 2090099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 171
Target Start/End: Original strand, 7426691 - 7426796
Alignment:
Q  67 gtgtaccggtactcctacttca-aaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 165  Q
    |||||||||||||| |  |||| ||||| | |||||||| ||| | ||| ||| |||||| || |||||||  |||||||||||||||||||  ||||||    
T  7426691 gtgtaccggtactcttctttcacaaaatatataaattaaatatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcattt 7426790  T
Q  166 cataag 171  Q
    ||||||    
T  7426791 cataag 7426796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 171
Target Start/End: Original strand, 9222885 - 9222990
Alignment:
Q  67 gtgtaccggtactcctacttca-aaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 165  Q
    |||||||||||||| |  |||| ||||| | ||||||||| || | ||| ||| |||||| || |||||||  |||||||||||||||||||  ||||||    
T  9222885 gtgtaccggtactcttgtttcataaaatttataaattaacgattactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcattt 9222984  T
Q  166 cataag 171  Q
    ||||||    
T  9222985 cataag 9222990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 206
Target Start/End: Complemental strand, 33986203 - 33986110
Alignment:
Q  112 ttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcata 206  Q
    ||||||| |||||| ||||||||||  ||||| |||||||||||||  ||||||||||||       |||||||||||| ||||||| |||||||    
T  33986203 ttttatgaaataaatagctatttgtcaatatt-atattttagaaaacatcatttcataaggaaaaaacgtcatttcattatttataataatcata 33986110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 171
Target Start/End: Original strand, 46707366 - 46707479
Alignment:
Q  58 taaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaa 157  Q
    ||||||||||||||||||||||||| ||||  |||| | |  |||||| || | ||||||| |||||| || ||||||| |  |||| ||| | ||||||    
T  46707366 taaattaaggtgtaccggtactcctgcttcctaaatttatgcattaacaatcaattttatgaaataaaaagttatttgtcggcatttgtatctcagaaaa 46707465  T
Q  158 tgtcatttcataag 171  Q
    | ||||||||||||    
T  46707466 tatcatttcataag 46707479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 171
Target Start/End: Original strand, 48752122 - 48752183
Alignment:
Q  110 atttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||||| ||||||||  |||||||  |||||||| ||||||||||| ||||||||||||    
T  48752122 atttttatgaaataaagaaatatttgtcaatatttatgttttagaaaatatcatttcataag 48752183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 171
Target Start/End: Complemental strand, 49739506 - 49739401
Alignment:
Q  67 gtgtaccggtactcctacttcaaaaatctt-taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 165  Q
    |||||||||||||| |  |||| ||| ||| ||||||||| || ||||||||  |||||| |  |||||||  ||||||||||||||||||| ||||| |    
T  49739506 gtgtaccggtactcttgtttcacaaaacttataaattaacgatcatttttataaaataaaaatttatttgtcaatatttatattttagaaaacgtcatat 49739407  T
Q  166 cataag 171  Q
    ||||||    
T  49739406 cataag 49739401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 171
Target Start/End: Original strand, 9259848 - 9259952
Alignment:
Q  68 tgtaccggtactcctacttca-aaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttc 166  Q
    ||||||||||||| |  |||| ||||| | ||||||||| || | ||| ||| |||||| || |||||||  |||||||||||||||||||  |||||||    
T  9259848 tgtaccggtactcttgtttcacaaaatatataaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttc 9259947  T
Q  167 ataag 171  Q
    |||||    
T  9259948 ataag 9259952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 80
Target Start/End: Complemental strand, 23061408 - 23061364
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactc 80  Q
    |||||||||| ||||||| ||| ||||||||||||||||||||||    
T  23061408 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 23061364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 118
Target Start/End: Complemental strand, 31216553 - 31216477
Alignment:
Q  42 ttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatg 118  Q
    |||| ||||||| || | |||||||||||||| |||| |||| |||| |||||| ||| ||||| ||||||||||||    
T  31216553 ttctacggtacacccttcaattaaggtgtaccagtacacctatttcataaatctataagttaacgataatttttatg 31216477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 152
Target Start/End: Original strand, 31530336 - 31530424
Alignment:
Q  65 aggtgtaccggtactcctacttcaaaaatctttaaattaactataattttt-atggaataaagagctatttgttgatatttatatttta 152  Q
    |||||||| ||||||||| ||||| || | | ||||||||| ||||||||| ||| |||||| | |||||||||  |||||||||||||    
T  31530336 aggtgtactggtactcctgcttcataattttataaattaacgataattttttatgtaataaataactatttgttattatttatatttta 31530424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 80
Target Start/End: Complemental strand, 35305558 - 35305514
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactc 80  Q
    |||||||||| |||||||  |||||||||||||||||||||||||    
T  35305558 gggaacttctacggtacactcgtaaattaaggtgtaccggtactc 35305514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 171
Target Start/End: Complemental strand, 38261209 - 38261074
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactat-aatttttatggaataaagagctattt 134  Q
    |||||||||| |||||||  | |||| | |||||||||||||||||| |||| | ||| ||  ||||||| || | |||||||| |||||| ||||||||    
T  38261209 gggaacttctacggtacactcataaagtgaggtgtaccggtactcctgcttc-ataattttataattaacgatcattttttatgtaataaatagctattt 38261111  T
Q  135 gttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||  | |||||||||||| | ||| |||| |||||||    
T  38261110 gtcaacatttatattttatagaatatcatctcataag 38261074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 152
Target Start/End: Complemental strand, 47693576 - 47693491
Alignment:
Q  65 aggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatatttta 152  Q
    |||||||||||||||| | ||||| || | | ||||||||| ||||||||  || |||||| ||||||||||  ||||||||||||||    
T  47693576 aggtgtaccggtactcttgcttcataattttataaattaacgataatttt--tgtaataaatagctatttgtcaatatttatatttta 47693491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 171
Target Start/End: Complemental strand, 5800297 - 5800186
Alignment:
Q  60 aattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatg 159  Q
    |||||||||||| | |||| |||| |||| |||||| ||| ||||| |||||||| |||  |||||||| ||||| | ||  ||||||| |||||||||     
T  5800297 aattaaggtgtatcagtacacctatttcataaatctataagttaacgataattttaatgtgataaagagatatttatcgacttttatatcttagaaaata 5800198  T
Q  160 tcatttcataag 171  Q
    | || |||||||    
T  5800197 ttatctcataag 5800186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 167
Target Start/End: Original strand, 25081778 - 25081889
Alignment:
Q  56 cgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaa 155  Q
    |||||||| |||||||| ||||||| |  |||| |||||| |||| |||| || | ||||||| |||||| |  ||||||| |  |||||||||||||||    
T  25081778 cgtaaattgaggtgtactggtactcttgtttcataaatctataaactaacgatcaattttatgaaataaataattatttgtcggcatttatattttagaa 25081877  T
Q  156 aatgtcatttca 167  Q
    ||| | ||||||    
T  25081878 aatatgatttca 25081889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 210
Target Start/End: Original strand, 29106426 - 29106538
Alignment:
Q  97 taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttat 196  Q
    ||||||||||||| |||||||| |  ||| |  | ||||||||||| ||||||||||||||| |||||| ||| |       | |||||||||| |||||    
T  29106426 taaattaactatattttttatgaagaaaatatgtgtttgttgatatgtatattttagaaaatatcattttatatg-aaagaacatcatttcattttttat 29106524  T
Q  197 aaaaatcatactaa 210  Q
    ||||||||||||||    
T  29106525 aaaaatcatactaa 29106538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 168
Target Start/End: Original strand, 29451076 - 29451147
Alignment:
Q  97 taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcat 168  Q
    ||||||||| || ||||||||  |||||||| |||||||| ||| ||||| ||||||||||| | |||||||    
T  29451076 taaattaacaattatttttataaaataaagaactatttgtcgatttttatcttttagaaaatataatttcat 29451147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 171
Target Start/End: Original strand, 31890156 - 31890207
Alignment:
Q  120 aataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||||| ||||||| |||||| |||||||||||||| ||||||| ||||    
T  31890156 aataaagagatatttgtggatattaatattttagaaaatatcatttcgtaag 31890207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 37499151 - 37499104
Alignment:
Q  33 tttgggaacttcttcggtacatccgtaaattaaggtgtaccggtactc 80  Q
    |||||||||||||  |||||| ||| ||||||||||||||||||||||    
T  37499151 tttgggaacttctatggtacacccgcaaattaaggtgtaccggtactc 37499104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 171
Target Start/End: Original strand, 42275364 - 42275471
Alignment:
Q  65 aggtgtaccggtactcctacttcaaaaatctttaaattaactataattttt-atggaataaagagctatttgttgatatttatattttagaaaatgtcat 163  Q
    |||||||||||||||| | ||||| || | | ||||||||| || |||||| ||| |||||| || |||||||| ||||| |||||||| | ||  ||||    
T  42275364 aggtgtaccggtactcatgcttcataattttataaattaacgatcattttttatgaaataaatagttatttgttaatattaatattttatagaacatcat 42275463  T
Q  164 ttcataag 171  Q
    ||||||||    
T  42275464 ttcataag 42275471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 171
Target Start/End: Original strand, 10635307 - 10635381
Alignment:
Q  97 taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||||| || | ||| ||| |||||| || |||||||| |||||||||||||||||||  |||||| |||||    
T  10635307 taaattaacgatcactttaatgaaataaaaagatatttgttaatatttatattttagaaaacatcattttataag 10635381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 171
Target Start/End: Complemental strand, 17376700 - 17376626
Alignment:
Q  97 taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||||| || | ||| ||| |||||| || |||||||  |||||||||||||||||||  ||||||||||||    
T  17376700 taaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataag 17376626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 171
Target Start/End: Complemental strand, 22821593 - 22821519
Alignment:
Q  97 taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||||| || ||||||||| |||||| |  |||||||  |||||||||||||| ||||  ||||||||||||    
T  22821593 taaattaacgattatttttatgaaataaaaaattatttgtcaatatttatattttaaaaaacatcatttcataag 22821519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 210
Target Start/End: Complemental strand, 23057107 - 23056932
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactat-aatttttatggaa-taaagagctatt 133  Q
    |||||||||| ||||||| ||| |||||||||||||||||| |||   |||  ||  | | |||||||||||| | |||||||| ||  ||| || | ||    
T  23057107 gggaacttctacggtacacccgcaaattaaggtgtaccggtcctctcgcttacaatttttataaattaactatcattttttatgaaagaaaataggtgtt 23057008  T
Q  134 tgttgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    |||||| || ||||||||||||||| |||||| |||||       | |||||||||| |||| ||||||||||||||    
T  23057007 tgttgacatatatattttagaaaatatcattttataag-aaaatacatcatttcattttttagaaaaatcatactaa 23056932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 171
Target Start/End: Original strand, 37765315 - 37765389
Alignment:
Q  97 taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||||  || ||||| ||| |||||| || |||||||  |||||||||||||||||||  ||||||||||||    
T  37765315 taaattaaagatcattttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataag 37765389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 171
Target Start/End: Complemental strand, 40850366 - 40850292
Alignment:
Q  97 taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||||| || | ||| ||| |||||| || |||||||  |||||||||||||||||||  ||||||||||||    
T  40850366 taaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataag 40850292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 171
Target Start/End: Complemental strand, 41321350 - 41321276
Alignment:
Q  97 taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||||| || | ||| ||| |||||| || |||||||  |||||||||||||||||||  ||||||||||||    
T  41321350 taaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataag 41321276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 152
Target Start/End: Complemental strand, 46641924 - 46641806
Alignment:
Q  35 tgggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactat-aatttttatggaataaagagctatt 133  Q
    ||||||||||| |||||||  || ||| | |||||||||||||||||| ||||  || | | ||||| ||| || | |||||||| | |||| |||||||    
T  46641924 tgggaacttctacggtacactcgcaaaatgaggtgtaccggtactcctgcttcttaattttataaatgaacgatcattttttatgtagtaaatagctatt 46641825  T
Q  134 tgttgatatttatatttta 152  Q
    |||  ||||||||||||||    
T  46641824 tgtcaatatttatatttta 46641806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 171
Target Start/End: Complemental strand, 48481194 - 48481120
Alignment:
Q  97 taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||||| || | ||| ||| |||||| || |||||||  |||||||||||||||||||  ||||||||||||    
T  48481194 taaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataag 48481120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 171
Target Start/End: Complemental strand, 51991908 - 51991803
Alignment:
Q  65 aggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatt 164  Q
    |||||||||||||||||| ||||||| || |  || ||||| || ||||| ||| ||||||||| ||||| |  |||||||||||||| ||||| | |||    
T  51991908 aggtgtaccggtactcctgcttcaaatatttacaatttaacgattatttt-atgaaataaagagttatttatccatatttatattttataaaatattatt 51991810  T
Q  165 tcataag 171  Q
    | |||||    
T  51991809 ttataag 51991803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 171
Target Start/End: Original strand, 6519987 - 6520123
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactat-aatttttatggaa-taaagagctatt 133  Q
    |||||||||| ||||||| ||| ||||||||||||||||||||||   |||  ||  | | |||||||||||| | |||||||| ||  ||| || | ||    
T  6519987 gggaacttctacggtaca-ccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaataggtgtt 6520085  T
Q  134 tgttgatatttatattttagaaaatgtcatttcataag 171  Q
    |||||| || ||||||||||||||| |||||| |||||    
T  6520086 tgttgacatatatattttagaaaatatcattttataag 6520123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 152
Target Start/End: Original strand, 24230569 - 24230686
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataattttt-atggaataaagagctattt 134  Q
    |||||||||| |||||||  |  ||| | |||||||  ||||||||| ||||| || | | ||||||||| ||||||||| ||| |||||| ||||||||    
T  24230569 gggaacttctacggtacactcacaaagtgaggtgtaatggtactcctgcttcataattttataaattaacgataattttttatgtaataaatagctattt 24230668  T
Q  135 gttgatatttatatttta 152  Q
    ||  | ||||||||||||    
T  24230669 gtcaaaatttatatttta 24230686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 59 - 152
Target Start/End: Complemental strand, 24452120 - 24452028
Alignment:
Q  59 aaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatatttta 152  Q
    ||||| ||||||||||||||| ||| || |||||| | ||| ||||| || | ||| ||| ||||||||| ||||| || ||||||||||||||    
T  24452120 aaattgaggtgtaccggtacttctattttaaaaatttataatttaacgatcagttt-atgaaataaagagttatttattaatatttatatttta 24452028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 97 - 170
Target Start/End: Original strand, 29953733 - 29953806
Alignment:
Q  97 taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataa 170  Q
    ||||||||| ||  |||||||  |||||||| || ||| | || |||||||||||||||||| |||||||||||    
T  29953733 taaattaacgatcgtttttataaaataaagaactctttatcgacatttatattttagaaaatatcatttcataa 29953806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 152
Target Start/End: Complemental strand, 30571387 - 30571298
Alignment:
Q  64 aaggtgtaccggtactcctacttcaaaaatctttaaattaactataattttt-atggaataaagagctatttgttgatatttatatttta 152  Q
    ||||||||||||||||| | ||||| || | | |||||| |  ||||||||| ||| |||||| ||||||||||  ||||||||||||||    
T  30571387 aaggtgtaccggtactcttgcttcataattttataaattgatgataattttttatgtaataaatagctatttgtcaatatttatatttta 30571298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #101
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 67 - 171
Target Start/End: Original strand, 43224676 - 43224781
Alignment:
Q  67 gtgtaccggtactcctacttcaaaaa-tctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 165  Q
    |||||||||||||| |  |||||||| | | ||||||||  || | ||| ||| |||||| || |||||||  |||||||||||||||||||  ||||||    
T  43224676 gtgtaccggtactcttttttcaaaaaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcattt 43224775  T
Q  166 cataag 171  Q
    ||||||    
T  43224776 cataag 43224781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #102
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 59 - 152
Target Start/End: Original strand, 43916370 - 43916462
Alignment:
Q  59 aaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatatttta 152  Q
    ||||| |||||||||||||||||| ||||||| || |  || ||||| || | ||||||| ||||||||| ||||| |  ||||||||||||||    
T  43916370 aaattgaggtgtaccggtactcctgcttcaaatatttacaatttaacgatta-ttttatgaaataaagagttatttatccatatttatatttta 43916462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #103
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 97 - 170
Target Start/End: Original strand, 48868124 - 48868197
Alignment:
Q  97 taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataa 170  Q
    ||||||||| || | ||| ||| |||||| || |||||||  |||||||||||||||||||  |||||||||||    
T  48868124 taaattaacaatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataa 48868197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #104
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 67 - 171
Target Start/End: Original strand, 50502375 - 50502480
Alignment:
Q  67 gtgtaccggtactcctacttca-aaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 165  Q
    |||||||||||||| |  |||| ||||| | ||||||||| || | ||| ||  |||||| || | |||||| |||||||||||||||||||  ||||||    
T  50502375 gtgtaccggtactcttgtttcacaaaatttataaattaacgatcactttaataaaataaaaaggtgtttgttaatatttatattttagaaaacatcattt 50502474  T
Q  166 cataag 171  Q
    ||||||    
T  50502475 cataag 50502480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #105
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 6329324 - 6329384
Alignment:
Q  111 tttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    |||||||| |||||| ||||||||||  |||||||||||||| | ||  ||||||||||||    
T  6329324 tttttatgtaataaatagctatttgtcaatatttatattttatagaacatcatttcataag 6329384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #106
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 171
Target Start/End: Original strand, 23540021 - 23540077
Alignment:
Q  115 tatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    |||| |||||| ||||||||||| ||  |||||||||||||||  ||||||||||||    
T  23540021 tatgaaataaaaagctatttgttaatgcttatattttagaaaacatcatttcataag 23540077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #107
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 168
Target Start/End: Original strand, 35242372 - 35242439
Alignment:
Q  100 attaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcat 168  Q
    |||||| || ||||||||  |||||| |||||||| |||| || ||||||||||||||| |||||||||    
T  35242372 attaaccatcatttttataaaataaa-agctattttttgacatatatattttagaaaatatcatttcat 35242439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #108
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 168
Target Start/End: Complemental strand, 38862492 - 38862436
Alignment:
Q  112 ttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcat 168  Q
    ||||||| |||||| || |||||||  |||||||||||||||||||  |||||||||    
T  38862492 ttttatgaaataaaaagttatttgtcaatatttatattttagaaaacatcatttcat 38862436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #109
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 165
Target Start/End: Complemental strand, 43306877 - 43306809
Alignment:
Q  97 taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 165  Q
    |||||||||||||||||||||| |  ||| ||   |||||||| || ||||||||||||||| ||||||    
T  43306877 taaattaactataatttttatgaagaaaataggcgtttgttgacatatatattttagaaaatatcattt 43306809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #110
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 80
Target Start/End: Complemental strand, 45673711 - 45673679
Alignment:
Q  48 ggtacatccgtaaattaaggtgtaccggtactc 80  Q
    ||||||||||||||||| |||||||||||||||    
T  45673711 ggtacatccgtaaattacggtgtaccggtactc 45673679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #111
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 158
Target Start/End: Original strand, 46153258 - 46153354
Alignment:
Q  62 ttaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaat 158  Q
    |||||| ||||| |||| |||| |||| |||| | ||| ||||| ||||||||||||  |||||||| ||| | | ||  |||||||||||||||||    
T  46153258 ttaaggagtaccagtacacctatttcataaatatataagttaacgataatttttatgtgataaagagatatatatcgacttttatattttagaaaat 46153354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 126; Significance: 4e-65; HSPs: 77)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 39 - 209
Target Start/End: Original strand, 20212156 - 20212326
Alignment:
Q  39 aacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttg 138  Q
    ||||||| | ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  20212156 aacttctaccgtacacccgtaaactaaggtgtaccggtactcctacttcaaaaatctttaaattaactattatttttatggaataaagagctatttgttg 20212255  T
Q  139 atatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatacta 209  Q
    ||||||||||||||||||| |||||||||||||       |||||||||||||||||||||||||||||||    
T  20212256 atatttatattttagaaaacgtcatttcataagaaaaaaacgtcatttcattgtttataaaaatcatacta 20212326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 39 - 210
Target Start/End: Complemental strand, 11598518 - 11598347
Alignment:
Q  39 aacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttg 138  Q
    ||||||| ||||||| | | |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||     
T  11598518 aacttctacggtacacctgcaaattaaggtgtaccgatactcctacttcaaaaatctttaaattaactattatttttatggaataaagagctattttttt 11598419  T
Q  139 atatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    |||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||    
T  11598418 atatttatattttagaaaatgtcatttcataagaaaaaaacgtcatttcattgtttataaaaatcatactaa 11598347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 36 - 171
Target Start/End: Original strand, 6513262 - 6513397
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttg 135  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||  |||||||||||||| ||||||||||||||||||||||||||    
T  6513262 gggaacttctacggtacatctgtaaattaaggtgtaccggtactcctactttaaaaaaatttaaattaactattatttttatggaataaagagctatttg 6513361  T
Q  136 ttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||||||||||||||||||||||||||||||||    
T  6513362 ttgatatttatattttagaaaatgtcatttcataag 6513397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 36 - 210
Target Start/End: Original strand, 6438172 - 6438346
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttg 135  Q
    |||||||||| ||||| |||||||||||||||||| ||||||||| || ||||||||| | |||||||||||||||||||||| |||||| |||||||||    
T  6438172 gggaacttctacggtaaatccgtaaattaaggtgtgccggtactcttaattcaaaaatttataaattaactataatttttatgaaataaaaagctatttg 6438271  T
Q  136 ttgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    ||||||||||||||||||||||| ||||||||||||       | ||||||||||||||||||||||||||||||    
T  6438272 ttgatatttatattttagaaaatatcatttcataagaaaaaaacatcatttcattgtttataaaaatcatactaa 6438346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 36 - 170
Target Start/End: Original strand, 34438187 - 34438321
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttg 135  Q
    ||||||||||  |||||| ||||||||||||||||||||| |||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  34438187 gggaacttctatggtacacccgtaaattaaggtgtaccggcactaatacttcaaaaatctttaaattaactattatttttatggaataaagagctatttg 34438286  T
Q  136 ttgatatttatattttagaaaatgtcatttcataa 170  Q
    |||||||||||||||||||||||||||||||||||    
T  34438287 ttgatatttatattttagaaaatgtcatttcataa 34438321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 37 - 168
Target Start/End: Complemental strand, 37909763 - 37909632
Alignment:
Q  37 ggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgt 136  Q
    ||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||||||    
T  37909763 ggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaaattttaaattaactattatttttatggaataaagagctatttgt 37909664  T
Q  137 tgatatttatattttagaaaatgtcatttcat 168  Q
    |||||||||||||||| |||||||||||||||    
T  37909663 tgatatttatattttataaaatgtcatttcat 37909632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 34 - 171
Target Start/End: Original strand, 43690020 - 43690157
Alignment:
Q  34 ttgggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatt 133  Q
    |||||||||||| || |||| ||| |||||||||||||  |||||||| ||||||||||  ||||||||||| || ||||||||||||||||||||||||    
T  43690020 ttgggaacttctacgatacacccgcaaattaaggtgtattggtactcccacttcaaaaaaatttaaattaacaattatttttatggaataaagagctatt 43690119  T
Q  134 tgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||||||||||||||||||||| | |||| |||||    
T  43690120 tgttgatatttatattttagaaaattttattttataag 43690157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 38 - 152
Target Start/End: Complemental strand, 33413110 - 33412996
Alignment:
Q  38 gaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgtt 137  Q
    |||||||| ||||||| | |||||||||||||||||||||||||||||| |||| | |||||||||||||| | |||||||||||||||| |||||||||    
T  33413110 gaacttctacggtacacctgtaaattaaggtgtaccggtactcctactttaaaattttttaaattaactattagttttatggaataaagaactatttgtt 33413011  T
Q  138 gatatttatatttta 152  Q
    |||||||||||||||    
T  33413010 gatatttatatttta 33412996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 50 - 210
Target Start/End: Complemental strand, 40370863 - 40370704
Alignment:
Q  50 tacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatatt 149  Q
    |||||||  ||||||| |||||  |||| |||||||| |||||  |||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||    
T  40370863 tacatccacaaattaaagtgtattggtattcctactttaaaaaaatttaaattaattattatttttatggaataaagagttatttgttgatatttatatt 40370764  T
Q  150 ttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    ||||||||||||||||||||||       | |||||| |||||||||||||||||||||||    
T  40370763 ttagaaaatgtcatttcataag-aaaaatcatcattttattgtttataaaaatcatactaa 40370704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 50 - 210
Target Start/End: Complemental strand, 12547759 - 12547596
Alignment:
Q  50 tacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatatt 149  Q
    |||| ||| ||||||||||||||  |||||| |||||||||||| | |||||||||||| ||||||||| |||||| |||||||| ||||||||||||||    
T  12547759 tacacccgcaaattaaggtgtacgagtactcttacttcaaaaatttataaattaactattatttttatgaaataaaaagctatttattgatatttatatt 12547660  T
Q  150 ttagaaaatgtcatttcataag---nnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    ||||||||| ||||||||||||          | ||||||||||||||||||||||||||||||    
T  12547659 ttagaaaatatcatttcataagaaaaaaaaaacatcatttcattgtttataaaaatcatactaa 12547596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 36 - 171
Target Start/End: Complemental strand, 32499551 - 32499416
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttg 135  Q
    |||| ||||| ||||||| ||  |||||||||| |||||||||| ||||||||||| | |||||||||| ||| |||||||||||||||| |||||||||    
T  32499551 gggatcttctacggtacacccacaaattaaggtataccggtacttctacttcaaaattttttaaattaattattatttttatggaataaaaagctatttg 32499452  T
Q  136 ttgatatttatattttagaaaatgtcatttcataag 171  Q
    |||||||||||||||||  |||||| ||||||||||    
T  32499451 ttgatatttatattttaagaaatgtaatttcataag 32499416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 38 - 165
Target Start/End: Complemental strand, 36489675 - 36489548
Alignment:
Q  38 gaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgtt 137  Q
    ||||||||  |||||| | | ||||||| || || |||||||| ||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||    
T  36489675 gaacttctatggtacacctgcaaattaaagtatatcggtactcatacttcaaaaatctttaaattaattactatttttatggaataaagagctatttgtt 36489576  T
Q  138 gatatttatattttagaaaatgtcattt 165  Q
    ||||||||||||||||||||| ||||||    
T  36489575 gatatttatattttagaaaatatcattt 36489548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 42 - 210
Target Start/End: Complemental strand, 22595136 - 22594969
Alignment:
Q  42 ttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgata 141  Q
    |||| ||||||| || |||||||||||||||||||||  ||  |||| |||||  ||| ||||| || ||||||||| || ||| |||||||||| ||      
T  22595136 ttctacggtacacccttaaattaaggtgtaccggtacatctgtttcataaatcaataagttaacgatcatttttatgtaaaaaaaagctatttgtcgact 22595037  T
Q  142 tttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    ||||||||||||||||| | ||||||||||         |||||||||||||||||| |||||||||||    
T  22595036 tttatattttagaaaatattatttcataagaaaaaat-atcatttcattgtttataagaatcatactaa 22594969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 98 - 168
Target Start/End: Original strand, 19268628 - 19268698
Alignment:
Q  98 aaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcat 168  Q
    |||||||| || ||||||||| ||||||||||||||||| ||||||||||||||||||||| | |||||||    
T  19268628 aaattaacgatcatttttatgaaataaagagctatttgtcgatatttatattttagaaaatattatttcat 19268698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 95 - 209
Target Start/End: Original strand, 19636164 - 19636270
Alignment:
Q  95 tttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgttt 194  Q
    |||||||||||||| ||||| | | ||||||||| ||||| || ||||||||| ||||||||||||||||||||||        | |||||| |||||||    
T  19636164 tttaaattaactattattttgaagaaataaagagatatttattaatatttatagtttagaaaatgtcatttcataa--------catcattttattgttt 19636255  T
Q  195 ataaaaatcatacta 209  Q
    |||||||||||||||    
T  19636256 ataaaaatcatacta 19636270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 95 - 209
Target Start/End: Original strand, 19834757 - 19834863
Alignment:
Q  95 tttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgttt 194  Q
    |||||||||||||| ||||| | | ||||||||| ||||| || ||||||||| ||||||||||||||||||||||        | |||||| |||||||    
T  19834757 tttaaattaactattattttgaagaaataaagagatatttattaatatttatagtttagaaaatgtcatttcataa--------catcattttattgttt 19834848  T
Q  195 ataaaaatcatacta 209  Q
    |||||||||||||||    
T  19834849 ataaaaatcatacta 19834863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 35 - 210
Target Start/End: Original strand, 3383190 - 3383366
Alignment:
Q  35 tgggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataa--tttttatggaataaagagctat 132  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||  ||||  ||  | | |||||||||||| |  |||||||| |  ||| || | |    
T  3383190 tgggaacttctacggtacatccgtaaattacggtgtaccggtactctcacttacaatttttataaattaactatcatttttttatgaagaaaataggtgt 3383289  T
Q  133 ttgttgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    ||||||| || ||||||||||||||| |||||| |||||       | |||||||||| ||||||||||| |||||||    
T  3383290 ttgttgacatatatattttagaaaatatcattttataag-aaaaaacatcatttcattttttataaaaattatactaa 3383366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 29 - 171
Target Start/End: Original strand, 38073099 - 38073240
Alignment:
Q  29 ttattttgggaacttcttcggtacatc-cgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaaga 127  Q
    ||||| ||||||||||| ||||||| | |  ||||| |||||||||||||||| ||||||| |||| | ||||||||| || | ||||||| |||||| |    
T  38073099 ttattatgggaacttctacggtacacctcacaaattgaggtgtaccggtactcttacttcataaatttataaattaacgatca-ttttatgaaataaata 38073197  T
Q  128 gctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    | |||||||  ||| |||||||||||||||  ||||||||||||    
T  38073198 gatatttgtcaata-ttatattttagaaaacatcatttcataag 38073240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 36 - 171
Target Start/End: Original strand, 38617728 - 38617862
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttg 135  Q
    |||||||||  |||||||  |||||||| |||||||||||||||| | ||||  |||||| ||||||||| || | ||||||| ||| || || ||||||    
T  38617728 gggaacttcaacggtacactcgtaaattgaggtgtaccggtactcttgcttcgtaaatctataaattaacaattaattttatgaaat-aatagttatttg 38617826  T
Q  136 ttgatatttatattttagaaaatgtcatttcataag 171  Q
    | |  |||||| ||||||||||| ||||||||||||    
T  38617827 tcgtcatttatgttttagaaaatatcatttcataag 38617862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 42 - 171
Target Start/End: Complemental strand, 15354832 - 15354702
Alignment:
Q  42 ttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaat-aaagagctatttgttgat 140  Q
    |||| ||||||| || |||||||||||||||| |||| |||  |||| |||||  |||||||||||| ||||||||| ||| ||||| |||||||| ||     
T  15354832 ttctacggtacacccttaaattaaggtgtaccagtacacctgtttcataaatcaataaattaactatcatttttatgtaataaaagaactatttgtcgac 15354733  T
Q  141 atttatattttagaaaatgtcatttcataag 171  Q
     ||||||||||| ||||| | ||||| ||||    
T  15354732 ttttatattttaaaaaatattatttcctaag 15354702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 58 - 171
Target Start/End: Complemental strand, 12071537 - 12071426
Alignment:
Q  58 taaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaa 157  Q
    |||||| ||||||||||||||||||||||||||||| ||  ||||||| || | ||||||| | ||||||| ||||| |  |||||||||||||||||||    
T  12071537 taaattgaggtgtaccggtactcctacttcaaaaat-ttataattaacgatta-ttttatgaagtaaagagttatttatcaatatttatattttagaaaa 12071440  T
Q  158 tgtcatttcataag 171  Q
      |||||| |||||    
T  12071439 catcattttataag 12071426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 42 - 171
Target Start/End: Complemental strand, 29943955 - 29943826
Alignment:
Q  42 ttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgata 141  Q
    |||| ||||||| || ||||||||||||||||||||| |||| |||| || ||  ||| ||||| || ||||||||| ||||||||| | | | | ||      
T  29943955 ttctacggtacacccttaaattaaggtgtaccggtacacctatttcataattcaataagttaacaatcatttttatgtaataaagagatgtctatcgact 29943856  T
Q  142 tttatattttagaaaatgtcatttcataag 171  Q
    ||||||||||| ||||| ||||||||||||    
T  29943855 tttatattttaaaaaatatcatttcataag 29943826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 158
Target Start/End: Complemental strand, 3911626 - 3911510
Alignment:
Q  42 ttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgata 141  Q
    |||| ||||||| || | |||||||||||||| |||| |||| |||| |||||| ||| ||||| |||||||||| |  |||||||| ||||| | ||      
T  3911626 ttctacggtacacccttcaattaaggtgtaccagtacacctatttcataaatctataagttaacgataatttttacgtgataaagagatatttatcgact 3911527  T
Q  142 tttatattttagaaaat 158  Q
    |||||||||||||||||    
T  3911526 tttatattttagaaaat 3911510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 158
Target Start/End: Complemental strand, 13119217 - 13119101
Alignment:
Q  42 ttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgata 141  Q
    |||| |||||||||| | |||||||||||||| |||| |||| |||| |||| | ||| ||||  ||||||||||||  |||||||| ||||| | ||      
T  13119217 ttctacggtacatccttcaattaaggtgtaccagtacacctatttcataaatatataagttaaagataatttttatgtgataaagagatatttatcgact 13119118  T
Q  142 tttatattttagaaaat 158  Q
    |||||||||||||||||    
T  13119117 tttatattttagaaaat 13119101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 171
Target Start/End: Complemental strand, 33494348 - 33494205
Alignment:
Q  30 tattttgggaacttcttcggtacatccgtaaattaaggt--gtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaaga 127  Q
    |||| ||||||||||| |||||||  |||||||| ||||  ||| |||||||| | ||||   ||| | ||||||||| || | |||||||  |||||||    
T  33494348 tattatgggaacttctacggtacactcgtaaattgaggtatgtatcggtactcttgcttctttaatttataaattaacgatcaattttatgatataaaga 33494249  T
Q  128 gctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    | ||||||| |  |||||||||||||||||| ||||||||||||    
T  33494248 gttatttgtcggcatttatattttagaaaatatcatttcataag 33494205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 47 - 158
Target Start/End: Original strand, 13507265 - 13507376
Alignment:
Q  47 cggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttat 146  Q
    |||||||||| ||||||||||||||| | ||| |||| |||| |||||  ||| ||||  || ||||||||| ||||||||| ||||| | ||  |||||    
T  13507265 cggtacatccttaaattaaggtgtactgatacacctatttcataaatcaataagttaatgatcatttttatgtaataaagagatatttatcgacttttat 13507364  T
Q  147 attttagaaaat 158  Q
    ||||||||||||    
T  13507365 attttagaaaat 13507376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 97 - 167
Target Start/End: Original strand, 6588297 - 6588367
Alignment:
Q  97 taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttca 167  Q
    ||||||||| || ||||||||| ||||||||  ||||||| ||  ||||||||||||||||||||||||||    
T  6588297 taaattaacaattatttttatgaaataaagaattatttgtcgagttttatattttagaaaatgtcatttca 6588367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 171
Target Start/End: Original strand, 5155768 - 5155829
Alignment:
Q  110 atttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||||| ||||||||| ||||||||||  ||||||||||||||||| | ||||||||||    
T  5155768 atttttatgtaataaagagatatttgttgacttttatattttagaaaatattatttcataag 5155829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 171
Target Start/End: Complemental strand, 34665981 - 34665841
Alignment:
Q  31 attttgggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaacta-taatttttatggaataaagagc 129  Q
    |||| |||||||||| ||||||| ||| ||||||||||||||||||||||   ||| | |  | | ||||||||||| || |||||||| || ||| ||     
T  34665981 atttagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactattattttttatgaaagaaatagg 34665883  T
Q  130 tatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    | |||||||| || ||||||||||||||| |||||| |||||    
T  34665882 tgtttgttgacatatatattttagaaaatatcattttataag 34665841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 112 - 206
Target Start/End: Original strand, 2283241 - 2283334
Alignment:
Q  112 ttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcata 206  Q
    ||||||| |||||| ||||||||||  |||||||||||||||||||  |||||||| |||       |||||||||||||||||||| |||||||    
T  2283241 ttttatgaaataaatagctatttgtcaatatttatattttagaaaacatcatttcacaag-aaaaaacgtcatttcattgtttataagaatcata 2283334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 158
Target Start/End: Original strand, 10456069 - 10456169
Alignment:
Q  58 taaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaa 157  Q
    ||||||| |||||||||||| |  ||||||  |||||| |||||||||||| | ||||||| |||||| || ||||| | |  |||||||||||||||||    
T  10456069 taaattatggtgtaccggtatttttacttcctaaatctataaattaactatcaattttatgaaataaatagttatttatcggcatttatattttagaaaa 10456168  T
Q  158 t 158  Q
    |    
T  10456169 t 10456169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 48 - 171
Target Start/End: Complemental strand, 26738427 - 26738303
Alignment:
Q  48 ggtacatccgtaaattaaggtgtaccggtactcctacttca-aaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttat 146  Q
    ||||||||| ||| || | |||||||||||||| |  | || ||||| | ||||||||| || ||||| ||| |||||| || |||||||  ||||||||    
T  26738427 ggtacatccataattttaagtgtaccggtactcttgttgcacaaaatttataaattaacgatcattttaatgaaataaaaaggtatttgtcaatatttat 26738328  T
Q  147 attttagaaaatgtcatttcataag 171  Q
    |||||||||||  ||||||||||||    
T  26738327 attttagaaaacatcatttcataag 26738303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 158
Target Start/End: Original strand, 36430618 - 36430734
Alignment:
Q  42 ttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgata 141  Q
    |||| ||||||| || | ||||||||||||||||||| |||| |||| |||| | |||  |||  ||||||||||||  |||||||| ||||| | ||      
T  36430618 ttctacggtacacccttcaattaaggtgtaccggtacacctatttcataaatttataaggtaaagataatttttatgtgataaagagatatttatcgact 36430717  T
Q  142 tttatattttagaaaat 158  Q
    |||||||||||||||||    
T  36430718 tttatattttagaaaat 36430734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 171
Target Start/End: Original strand, 42640874 - 42640984
Alignment:
Q  59 aaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaat 158  Q
    ||||| |||| ||||||||||| ||||||| |||| | ||||||||| || | ||||||| |||||| || |||||||  ||| |||||||||||||||     
T  42640874 aaattgaggtataccggtactcttacttcataaatttataaattaacgatca-ttttatgaaataaataggtatttgtcaata-ttatattttagaaaac 42640971  T
Q  159 gtcatttcataag 171  Q
     ||||||||||||    
T  42640972 atcatttcataag 42640984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 171
Target Start/End: Complemental strand, 1353911 - 1353777
Alignment:
Q  37 ggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataattttt-atggaataaagagctatttg 135  Q
    ||||||||| ||||||| ||| ||||||||||||||| ||||||   ||| | |  | | ||||||||||||||||||| ||| || ||| || | ||||    
T  1353911 ggaacttctacggtacacccgcaaattaaggtgtaccagtactctcgctt-acatttttataaattaactataattttttatgaaagaaataggtgtttg 1353813  T
Q  136 ttgatatttatattttagaaaatgtcatttcataag 171  Q
    |||| || ||||||||||||||| |||||| |||||    
T  1353812 ttgacatatatattttagaaaatatcattttataag 1353777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 171
Target Start/End: Original strand, 1580276 - 1580383
Alignment:
Q  65 aggtgtaccggtactcctacttcaaaaatctttaaattaactataattttt-atggaataaagagctatttgttgatatttatattttagaaaatgtcat 163  Q
    |||||||||||||||| | ||||| || | | | ||||||| ||||||||| ||| |||||| ||||||||||  |||||||||||||| | ||  ||||    
T  1580276 aggtgtaccggtactcttgcttcataattttatgaattaacgataattttttatgtaataaatagctatttgtcaatatttatattttatagaacatcat 1580375  T
Q  164 ttcataag 171  Q
    ||||||||    
T  1580376 ttcataag 1580383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 198
Target Start/End: Original strand, 8362424 - 8362563
Alignment:
Q  58 taaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaa 157  Q
    |||||| |||||||| |||||||||| ||||||||| | ||| ||||| || ||||| ||| ||||||||  ||||  |  |||||||||||||||||||    
T  8362424 taaattgaggtgtactggtactcctatttcaaaaatttataatttaacgattatttt-atgaaataaagacttattcatcaatatttatattttagaaaa 8362522  T
Q  158 tgtcatttcataagnnnnnnncgtcatttcattgtttataa 198  Q
      |||||| |||||       | ||||||||||||||||||    
T  8362523 catcattttataagaaaaaaacatcatttcattgtttataa 8362563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 152
Target Start/End: Original strand, 15362492 - 15362585
Alignment:
Q  58 taaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatatttta 152  Q
    |||||| |||||||||||||||||| ||||||| || | ||| ||||| || | ||||||| ||||||||| ||||| |  ||||||||||||||    
T  15362492 taaattgaggtgtaccggtactcctgcttcaaatatttataatttaacgatta-ttttatgaaataaagagttatttatcaatatttatatttta 15362585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 97 - 171
Target Start/End: Complemental strand, 21425554 - 21425480
Alignment:
Q  97 taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||||| || |||||| || |||||| || |||||||  ||||||||||||||||||| ||||| |||||||    
T  21425554 taaattaacgatcatttttgtgaaataaaaagttatttgtcaatatttatattttagaaaacgtcatatcataag 21425480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 65 - 171
Target Start/End: Original strand, 25712748 - 25712853
Alignment:
Q  65 aggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatt 164  Q
    |||||||||| |||| ||||||||||||| | ||| ||||| || ||||| ||  ||||||||| ||||| |  |||||||||||||||||||  |||||    
T  25712748 aggtgtaccgatacttctacttcaaaaatttataatttaacgattatttt-ataaaataaagagttatttatcaatatttatattttagaaaacatcatt 25712846  T
Q  165 tcataag 171  Q
    | |||||    
T  25712847 ttataag 25712853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 171
Target Start/End: Original strand, 5084870 - 5084975
Alignment:
Q  67 gtgtaccggtactcctacttca-aaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 165  Q
    |||||||||||||| |  |||| ||||| | ||||||||  || | ||| ||| |||||| || |||||||  |||||||||||||||||||| ||||||    
T  5084870 gtgtaccggtactcttgtttcacaaaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaatatcattt 5084969  T
Q  166 cataag 171  Q
    ||||||    
T  5084970 cataag 5084975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 171
Target Start/End: Original strand, 16814882 - 16814987
Alignment:
Q  67 gtgtaccggtactcctacttca-aaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 165  Q
    |||||||||||||| |  |||| ||||| | ||||||||  || | ||| ||| |||||| || |||||||  |||||||||||||||||||| ||||||    
T  16814882 gtgtaccggtactcttgtttcacaaaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaatatcattt 16814981  T
Q  166 cataag 171  Q
    ||||||    
T  16814982 cataag 16814987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 171
Target Start/End: Original strand, 16854162 - 16854267
Alignment:
Q  67 gtgtaccggtactcctacttca-aaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 165  Q
    |||||||||||||| |  |||| ||||| | ||||||||  || | ||| ||| |||||| || |||||||  |||||||||||||||||||| ||||||    
T  16854162 gtgtaccggtactcttgtttcacaaaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaatatcattt 16854261  T
Q  166 cataag 171  Q
    ||||||    
T  16854262 cataag 16854267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 206
Target Start/End: Complemental strand, 25740317 - 25740224
Alignment:
Q  112 ttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcata 206  Q
    ||||||| |||||| ||||||||||  |||||||||||||||||||  | ||||||| ||       |||||||||||||||||||| |||||||    
T  25740317 ttttatgaaataaaaagctatttgtcaatatttatattttagaaaacattatttcat-aggaaaaaacgtcatttcattgtttataagaatcata 25740224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 171
Target Start/End: Complemental strand, 36023986 - 36023858
Alignment:
Q  42 ttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgata 141  Q
    |||| ||||||| || | |||||||||||||| |||| |||| |||| ||||||  || ||||| ||||||||||||  |||||||| ||||| | ||      
T  36023986 ttctacggtacacccttcaattaaggtgtaccagtacacctatttcataaatcta-aagttaacgataatttttatgtgataaagagatatttatcgact 36023888  T
Q  142 tttatattttagaaaatgtcatttcataag 171  Q
    ||||||||||| ||||| | || |||||||    
T  36023887 tttatattttaaaaaatattatctcataag 36023858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 171
Target Start/End: Complemental strand, 37083617 - 37083480
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactat-aatttttatggaa-taaagagctatt 133  Q
    |||||||||| ||||||||||| ||||||||||||| ||||||||   |||  ||  | | |||||||||||| | |||||||| ||  ||| || | ||    
T  37083617 gggaacttctacggtacatccgcaaattaaggtgtatcggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaataggtgtt 37083518  T
Q  134 tgttgatatttatattttagaaaatgtcatttcataag 171  Q
    |||||| || ||||||||||||||| |||||| |||||    
T  37083517 tgttgacatatatattttagaaaatatcattttataag 37083480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 168
Target Start/End: Original strand, 37781890 - 37781998
Alignment:
Q  59 aaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaat 158  Q
    ||||| ||||||||  |||||| | ||||| |||| | ||||| ||| || ||||| ||| |||||||||||||||||  |||||||| ||||||||||     
T  37781890 aaattgaggtgtacatgtactcttccttcataaatttataaatgaacgatcatttt-atgaaataaagagctatttgtcaatatttatgttttagaaaac 37781988  T
Q  159 gtcatttcat 168  Q
     |||||||||    
T  37781989 atcatttcat 37781998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 171
Target Start/End: Original strand, 15205766 - 15205877
Alignment:
Q  59 aaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaat 158  Q
    ||||| |||||||  |||| |||||||||  |||| | ||||||||| || ||||| ||| | ||||||| |||||||  || ||||||||||||||||     
T  15205766 aaattgaggtgtagaggtaatcctacttcgtaaatttataaattaacgatcatttt-atgaagtaaagaggtatttgtcaatgtttatattttagaaaac 15205864  T
Q  159 gtcatttcataag 171  Q
     ||||||||||||    
T  15205865 atcatttcataag 15205877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 171
Target Start/End: Original strand, 18008986 - 18009090
Alignment:
Q  67 gtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttc 166  Q
    |||||||||||||| |  |||| |||  || |||||||| || | ||| ||| |||||| || |||||||| |||||||||||||||||||  |||||||    
T  18008986 gtgtaccggtactcttgtttcacaaaatttaaaattaacgatcactttaatgaaataaaaaggtatttgttaatatttatattttagaaaacatcatttc 18009085  T
Q  167 ataag 171  Q
     ||||    
T  18009086 gtaag 18009090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 170
Target Start/End: Complemental strand, 35292887 - 35292783
Alignment:
Q  67 gtgtaccggtactcctacttca-aaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 165  Q
    |||||||||||||| |  |||| ||||| | |||||||| ||| | ||| ||| |||||| || |||||||  |||||||||||||||||||  ||||||    
T  35292887 gtgtaccggtactcttgtttcataaaatatataaattaaatatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcattt 35292788  T
Q  166 cataa 170  Q
    |||||    
T  35292787 cataa 35292783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 171
Target Start/End: Original strand, 35895311 - 35895447
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataattttt-atggaataaagagctattt 134  Q
    |||||||| | |||||||  | |||| | |||||||||||||||||| ||||| || | | ||||||||| |  |||||| ||| |||||| | ||||||    
T  35895311 gggaacttttacggtacactcataaagtgaggtgtaccggtactcctgcttcataattttataaattaacgaccattttttatgtaataaataactattt 35895410  T
Q  135 gttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||  |||||||||||||| | ||  ||||||||||||    
T  35895411 gtcaatatttatattttatagaacatcatttcataag 35895447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 167
Target Start/End: Original strand, 4114659 - 4114793
Alignment:
Q  32 ttttgggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagcta 131  Q
    |||||||||||||  | |||||  ||||||||  |||||| |||||||| | ||||| |||||| |||| |||| || | ||||||| |||||| || ||    
T  4114659 ttttgggaacttcaaccgtacactcgtaaattcgggtgtaacggtactc-tgcttcataaatctataaactaacgatcaattttatgaaataaatagtta 4114757  T
Q  132 tttgttgatatttatattttagaaaatgtcatttca 167  Q
    ||| | |  |||||||||||||||||| | ||||||    
T  4114758 tttatcggcatttatattttagaaaatataatttca 4114793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 80
Target Start/End: Original strand, 15771314 - 15771353
Alignment:
Q  41 cttcttcggtacatccgtaaattaaggtgtaccggtactc 80  Q
    ||||| ||||||| ||||||||||||||||||||||||||    
T  15771314 cttctacggtacacccgtaaattaaggtgtaccggtactc 15771353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 165
Target Start/End: Original strand, 16637091 - 16637158
Alignment:
Q  98 aaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 165  Q
    |||||||| || | ||||||| ||||||||| |||||||||  ||||||||||| |||||| ||||||    
T  16637091 aaattaacgattaattttatgaaataaagagttatttgttggcatttatatttttgaaaatatcattt 16637158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 171
Target Start/End: Original strand, 36049549 - 36049600
Alignment:
Q  120 aataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    |||||| || |||||||  |||||||||||||||||||| ||||||||||||    
T  36049549 aataaaaaggtatttgtcaatatttatattttagaaaatatcatttcataag 36049600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 171
Target Start/End: Complemental strand, 6657790 - 6657716
Alignment:
Q  97 taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||||| || | ||| ||| |||||| || |||||||  |||||||||||||||||||  ||||||||||||    
T  6657790 taaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataag 6657716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 171
Target Start/End: Original strand, 7504084 - 7504158
Alignment:
Q  97 taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||||| || | ||| ||| |||||| || |||||||  |||||||||||||||||||  ||||||||||||    
T  7504084 taaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataag 7504158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 18576331 - 18576470
Alignment:
Q  67 gtgtaccggtactcctacttca-aaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 165  Q
    |||||||||||||| |  |||| ||||| | ||||||||  || | ||| ||| |||||| || |||||||  |||||||||||||||||||  ||||||    
T  18576331 gtgtaccggtactcttgtttcacaaaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcattt 18576430  T
Q  166 cataagnnnnnnncgtcatttcattgtttataaaaatcata 206  Q
    ||||||       | |||||||||||||||||| |||||||    
T  18576431 cataag-aaaaaccatcatttcattgtttataagaatcata 18576470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 158
Target Start/End: Complemental strand, 36054339 - 36054229
Alignment:
Q  48 ggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttata 147  Q
    ||||||||| |||||||| ||||| | |||| |||| |||| |||||  ||| ||| | || ||||||||| ||||||||| ||||| |  |  ||||||    
T  36054339 ggtacatccttaaattaaagtgtatcagtacacctatttcataaatcaataagttatcaatcatttttatgtaataaagagatatttatcaacttttata 36054240  T
Q  148 ttttagaaaat 158  Q
    |||||||||||    
T  36054239 ttttagaaaat 36054229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 171
Target Start/End: Original strand, 39878981 - 39879055
Alignment:
Q  97 taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||||| || | ||| ||| |||||| || |||||||  |||||||||||||||||||  ||||||||||||    
T  39878981 taaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataag 39879055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 67 - 171
Target Start/End: Complemental strand, 1860303 - 1860198
Alignment:
Q  67 gtgtaccggtactcctacttca-aaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 165  Q
    |||||||||||||| || | || ||||| | ||||||||| || | ||| ||| |||||| || ||||| |  |||||||||||||||||||  ||||||    
T  1860303 gtgtaccggtactcttattgcacaaaatttataaattaacaatcactttaatgaaataaaaaggtatttatcaatatttatattttagaaaacatcattt 1860204  T
Q  166 cataag 171  Q
    ||||||    
T  1860203 cataag 1860198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 67 - 171
Target Start/End: Original strand, 2316869 - 2316974
Alignment:
Q  67 gtgtaccggtactcctacttca-aaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 165  Q
    |||||||||||||| |  |||| ||||| | ||||||||  || | ||| ||| |||||| || |||||||  |||||||||||||||||||  ||||||    
T  2316869 gtgtaccggtactcttgtttcataaaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcattt 2316968  T
Q  166 cataag 171  Q
    ||||||    
T  2316969 cataag 2316974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 210
Target Start/End: Original strand, 5389202 - 5389375
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactat-aatttttatggaataaagagctattt 134  Q
    |||||||||| ||||||| ||| ||||||||||||||||| ||||   ||| | |  | | |||||||||||| | |||||||| || ||| |  | |||    
T  5389202 gggaacttctacggtacacccgcaaattaaggtgtaccggcactctcgctt-acatttttataaattaactatcattttttatgaaagaaatatgtgttt 5389300  T
Q  135 gttgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    ||||| || ||||||||||||||| |||||| |||||       | |||||||||| |||| ||||||||||||||    
T  5389301 gttgacatatatattttagaaaatatcattttataag-aaaaaacatcatttcattttttagaaaaatcatactaa 5389375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 35 - 80
Target Start/End: Complemental strand, 6884569 - 6884524
Alignment:
Q  35 tgggaacttcttcggtacatccgtaaattaaggtgtaccggtactc 80  Q
    ||||||||| | ||||||||  ||||||||||||||||||||||||    
T  6884569 tgggaacttttacggtacatttgtaaattaaggtgtaccggtactc 6884524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 152
Target Start/End: Complemental strand, 9589520 - 9589403
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactat-aatttttatggaataaagagctattt 134  Q
    |||||||||| |||||||  |  ||| | |||||||||||||||||||||||  || | | ||||| ||| || | |||||||| | |||| ||||||||    
T  9589520 gggaacttctacggtacactcacaaaatgaggtgtaccggtactcctacttcttaattatataaatgaacgatcattttttatgtattaaatagctattt 9589421  T
Q  135 gttgatatttatatttta 152  Q
    ||  ||||||||||||||    
T  9589420 gtcaatatttatatttta 9589403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 67 - 171
Target Start/End: Complemental strand, 28394444 - 28394339
Alignment:
Q  67 gtgtaccggtactcctacttca-aaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 165  Q
    |||||||||||||| |  |||| ||||| | ||||||||  || | ||| ||| |||||| || |||||||  |||||||||||||||||||  ||||||    
T  28394444 gtgtaccggtactcttgtttcacaaaatatataaattaatgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcattt 28394345  T
Q  166 cataag 171  Q
    ||||||    
T  28394344 cataag 28394339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 152
Target Start/End: Original strand, 32602303 - 32602420
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataattttt-atggaataaagagctattt 134  Q
    |||||||||| |||||||  |  ||| | |||||||||||||||||| ||||  || | | ||||| ||| ||||||||| ||| | |||| ||||||||    
T  32602303 gggaacttctacggtacactcacaaaatgaggtgtaccggtactcctgcttcttaattttataaatgaacgataattttttatgtagtaaatagctattt 32602402  T
Q  135 gttgatatttatatttta 152  Q
    ||  ||||||||||||||    
T  32602403 gtcaatatttatatttta 32602420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 67 - 171
Target Start/End: Complemental strand, 40533627 - 40533522
Alignment:
Q  67 gtgtaccggtactcctacttca-aaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 165  Q
    |||||||||||||| |  |||| ||||| | ||||||||  || | ||| ||| |||||| || |||||||  |||||||||||||||||||  ||||||    
T  40533627 gtgtaccggtactcttgtttcataaaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcattt 40533528  T
Q  166 cataag 171  Q
    ||||||    
T  40533527 cataag 40533522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 110 - 171
Target Start/End: Complemental strand, 40588210 - 40588150
Alignment:
Q  110 atttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||||| ||||||||||||||| || | |||  ||||||| ||||||||||||||||||    
T  40588210 atttttatgaaataaagagctattt-ttcaaattgttattttataaaatgtcatttcataag 40588150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 59 - 152
Target Start/End: Complemental strand, 40810801 - 40810709
Alignment:
Q  59 aaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatatttta 152  Q
    ||||| |||||||||||||||||| ||||||| || |  || ||||| || | ||||||| ||||||||| ||||| |  ||||||||||||||    
T  40810801 aaattgaggtgtaccggtactcctgcttcaaatatttacaatttaacgatta-ttttatgaaataaagagttatttatcaatatttatatttta 40810709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 59 - 152
Target Start/End: Original strand, 41555455 - 41555547
Alignment:
Q  59 aaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatatttta 152  Q
    ||||| |||||||||||||||||| ||||||| || |  || ||||| || | ||||||| ||||||||| ||||| |  ||||||||||||||    
T  41555455 aaattgaggtgtaccggtactcctgcttcaaatatttacaatttaacgatta-ttttatgaaataaagagttatttatcaatatttatatttta 41555547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 67 - 171
Target Start/End: Complemental strand, 45555758 - 45555653
Alignment:
Q  67 gtgtaccggtactcctacttca-aaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 165  Q
    |||||||||||||| || |||| ||||| | ||||||||  || | ||| ||| |||||| || ||||| |  |||||||||||||||||||  ||||||    
T  45555758 gtgtaccggtactcttatttcacaaaatatataaattaatgatcactttaatgaaataaaaaggtatttatcaatatttatattttagaaaacatcattt 45555659  T
Q  166 cataag 171  Q
    ||||||    
T  45555658 cataag 45555653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 112 - 165
Target Start/End: Original strand, 45690575 - 45690628
Alignment:
Q  112 ttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 165  Q
    ||||||| |||||| ||||||| ||  |||||||||||||||||||| ||||||    
T  45690575 ttttatgaaataaaaagctattagtcaatatttatattttagaaaatatcattt 45690628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 9122149 - 9122273
Alignment:
Q  29 ttattttgggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactat-aatttttatggaataaaga 127  Q
    |||| |||||||||||| |||||||  |  ||| ||||||||||||||||| || ||||  || | | ||||| ||| || | |||||||| |||||| |    
T  9122149 ttatattgggaacttctacggtacactcacaaaataaggtgtaccggtacttctgcttcttaattttataaatgaacgatcattttttatgtaataaata 9122248  T
Q  128 gctatttgttgatatttatatttta 152  Q
     ||||||||  ||||||||||||||    
T  9122249 actatttgtcaatatttatatttta 9122273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 169
Target Start/End: Complemental strand, 13450669 - 13450598
Alignment:
Q  97 taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcata 169  Q
    ||||||||  |||||||||||  ||||||||||||||||| ||  |||||| |||||||||| ||||| ||||    
T  13450669 taaattaatgataatttttattaaataaagagctatttgtcga-ctttatactttagaaaatatcattccata 13450598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 167
Target Start/End: Original strand, 16114475 - 16114595
Alignment:
Q  47 cggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttat 146  Q
    |||||||  |||||||| |||||||||||||||| |  | || |||||| |||| |||| || | ||||||| |||||| || ||||||| |   |||||    
T  16114475 cggtacactcgtaaattgaggtgtaccggtactcttgttccataaatctataaactaacgatcaattttatgaaataaatagttatttgtcggcctttat 16114574  T
Q  147 attttagaaaatgtcatttca 167  Q
    |||||| ||||| | ||||||    
T  16114575 attttaaaaaatatgatttca 16114595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 171
Target Start/End: Complemental strand, 21836588 - 21836556
Alignment:
Q  139 atatttatattttagaaaatgtcatttcataag 171  Q
    |||||||||||||||||||| ||||||||||||    
T  21836588 atatttatattttagaaaatatcatttcataag 21836556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 122; Significance: 9e-63; HSPs: 99)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 36 - 210
Target Start/End: Complemental strand, 47302802 - 47302628
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttg 135  Q
    |||||||||| |||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||| ||||||    
T  47302802 gggaacttctacggtacatccgtaaattaagttttaccggtactcctactttaaaaatctttaaattaactattatttttatgaaataaagagttatttg 47302703  T
Q  136 ttgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    ||||||||||||||||||||||||||||||||||||       |||||||| |||||||||||||||||||||||    
T  47302702 ttgatatttatattttagaaaatgtcatttcataagaaaaaaacgtcattttattgtttataaaaatcatactaa 47302628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 36 - 210
Target Start/End: Original strand, 53695386 - 53695559
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttg 135  Q
    |||||||||| ||||||| | | ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  53695386 gggaacttctacggtacacctgcaaattaaggtgtaccggtactcctaattcaaaaatctttaaattaactattatttttatggaataaagagttatttg 53695485  T
Q  136 ttgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    ||||||||||||||||||||||||| ||||||||||       ||||||||||||||||||||||||||||||||    
T  53695486 ttgatatttatattttagaaaatgttatttcataag-aaaaaacgtcatttcattgtttataaaaatcatactaa 53695559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 36 - 206
Target Start/End: Original strand, 46215772 - 46215943
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttg 135  Q
    |||||||||| |||||||  || ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  46215772 gggaacttctacggtacactcgcaaattaatgtgtaccggtactcctacttcaaaaatctttaaattaactattatttttatggaataaaaagctatttg 46215871  T
Q  136 ttgatatttatattttagaaaatgtcatttcataa-gnnnnnnncgtcatttcattgtttataaaaatcata 206  Q
    ||||||||||||||||| |||||||||||| |||| |       ||||||||||||||||||||||||||||    
T  46215872 ttgatatttatattttaaaaaatgtcattttataaggaaaaaaacgtcatttcattgtttataaaaatcata 46215943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 34 - 210
Target Start/End: Original strand, 56361313 - 56361489
Alignment:
Q  34 ttgggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaact-ataatttttatggaataaagagctat 132  Q
    |||| ||||||| ||||||| ||| |||||||||||||  ||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||    
T  56361313 ttggaaacttctacggtacacccgcaaattaaggtgtattggtactcctacttcaaaaatctttaaatttacttattatttttatggaataaagagctat 56361412  T
Q  133 ttgttgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    ||||||||||||||||||||| |||||||||||||||||       | ||||||||||||||||||||||| ||||||    
T  56361413 ttgttgatatttatattttaggaaatgtcatttcataag-aaaaaacatcatttcattgtttataaaaatcgtactaa 56361489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 32 - 210
Target Start/End: Complemental strand, 36091468 - 36091289
Alignment:
Q  32 ttttgggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagcta 131  Q
    |||| ||||||||| ||||||| | |||||||||||||||||||||||| |||||||||||| | |||||||||||| ||||||||| |||||| |||||    
T  36091468 tttttggaacttctacggtacacctgtaaattaaggtgtaccggtactcttacttcaaaaatttataaattaactatcatttttatgaaataaaaagcta 36091369  T
Q  132 tttgttgatatttatattttagaaaatgtcatttcataag-nnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    ||||||||||||| ||||||||||||| ||||||||||||        | ||||||||||||||||||||||||||||||    
T  36091368 tttgttgatatttgtattttagaaaatatcatttcataagaaaaaaaacatcatttcattgtttataaaaatcatactaa 36091289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 38 - 210
Target Start/End: Complemental strand, 31908846 - 31908674
Alignment:
Q  38 gaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgtt 137  Q
    |||||||| ||||||| ||| |||||||||||||||||||||| |||||||||||| | |||||||||||| | ||||||| |||||| |||||||||||    
T  31908846 gaacttctacggtacacccgcaaattaaggtgtaccggtactcttacttcaaaaatttataaattaactatcaattttatgaaataaaaagctatttgtt 31908747  T
Q  138 gatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    ||||||||||||||| ||||| ||||||||||||       | |||||||||||||||||||||| |||||||    
T  31908746 gatatttatattttaaaaaatatcatttcataagaaaaaatcatcatttcattgtttataaaaatgatactaa 31908674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 36 - 171
Target Start/End: Complemental strand, 31681592 - 31681457
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttg 135  Q
    |||||||||| ||||||| ||||||||||||||||||| ||||||| ||||||||||  ||||||||||| |  ||||||||||||||||||| ||||||    
T  31681592 gggaacttctacggtacacccgtaaattaaggtgtaccagtactcccacttcaaaaaaatttaaattaacaaatatttttatggaataaagagttatttg 31681493  T
Q  136 ttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||||||||||||| ||||||||||||||||||    
T  31681492 ttgatatttatattttaaaaaatgtcatttcataag 31681457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 48 - 209
Target Start/End: Original strand, 39161813 - 39161978
Alignment:
Q  48 ggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttata 147  Q
    |||||| ||||||||||| ||||| || ||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||    
T  39161813 ggtacacccgtaaattaaagtgtatcgatactcctacttcaaaaatctttaaattaactattatttttatagaataaagagttatttgttgatatttata 39161912  T
Q  148 ttttagaaaatgtcatttcata----agnnnnnnncgtcatttcattgtttataaaaatcatacta 209  Q
    |||||||||||||||||| |||    |        |||||||||||||||||||||||||||||||    
T  39161913 ttttagaaaatgtcattttataaaagaaaaaaaaacgtcatttcattgtttataaaaatcatacta 39161978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 37 - 171
Target Start/End: Complemental strand, 9858654 - 9858520
Alignment:
Q  37 ggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgt 136  Q
    ||||||||| ||||||| | | |||||||||||||||||||||| |||||||||||| | |||||||||||| ||||||||| |||||| ||||||||||    
T  9858654 ggaacttctacggtacacctgcaaattaaggtgtaccggtactcttacttcaaaaatttataaattaactattatttttatgaaataaaaagctatttgt 9858555  T
Q  137 tgatatttatattttagaaaatgtcatttcataag 171  Q
    |||||||||||||||||||||| |||||| |||||    
T  9858554 tgatatttatattttagaaaatatcattttataag 9858520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 49 - 168
Target Start/End: Original strand, 30891170 - 30891289
Alignment:
Q  49 gtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatat 148  Q
    ||||||||  |||||||||||||||||||||   |||| |||||||| || ||||||||| ||||||||| ||||||||||||||||||||||||| |||    
T  30891170 gtacatccacaaattaaggtgtaccggtactttaactttaaaaatctatatattaactatcatttttatgaaataaagagctatttgttgatatttgtat 30891269  T
Q  149 tttagaaaatgtcatttcat 168  Q
    |||||||||| |||||||||    
T  30891270 tttagaaaatatcatttcat 30891289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 47 - 171
Target Start/End: Complemental strand, 22413955 - 22413831
Alignment:
Q  47 cggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttat 146  Q
    |||||||||| ||||||||| ||||||||||| |||| |||| |||||  ||| ||||  || ||||||||| ||||||||| ||||||||||  |||||    
T  22413955 cggtacatccttaaattaagatgtaccggtacacctatttcataaatcaataagttaatgattatttttatgtaataaagagatatttgttgacttttat 22413856  T
Q  147 attttagaaaatgtcatttcataag 171  Q
    |||||| ||||| | ||||||||||    
T  22413855 attttaaaaaatattatttcataag 22413831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 110 - 210
Target Start/End: Complemental strand, 29646951 - 29646852
Alignment:
Q  110 atttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatacta 209  Q
    ||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||       | | |||||||||||||||||||| ||||||    
T  29646951 atttttatggaataaagtgttatttgttgatatttatattttaaaaaatgtcatttcataag-aaaaaacattatttcattgtttataaaaattatacta 29646853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 36 - 134
Target Start/End: Original strand, 46004356 - 46004453
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctattt 134  Q
    |||||||||| ||| ||| | |||| || |||||||||| ||||| ||||||||||||||||||||||||||  | |||||||||||||||||||||||    
T  46004356 gggaacttctacggcacaccagtaagttgaggtgtaccgatactc-tacttcaaaaatctttaaattaactactaattttatggaataaagagctattt 46004453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 38 - 171
Target Start/End: Original strand, 43958996 - 43959129
Alignment:
Q  38 gaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgtt 137  Q
    |||||||| |||||||   |||||||| ||||||||||||||| ||||||  |||||| ||||||||| || | ||||||| |||||| ||  ||||||     
T  43958996 gaacttctacggtacacttgtaaattatggtgtaccggtactcttacttcctaaatctataaattaacgatcaattttatgaaataaatagtcatttgtc 43959095  T
Q  138 gatatttatattttagaaaatgtcatttcataag 171  Q
    |  |||||||||||||||||  ||||||||||||    
T  43959096 ggcatttatattttagaaaacatcatttcataag 43959129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 33 - 158
Target Start/End: Complemental strand, 46663735 - 46663610
Alignment:
Q  33 tttgggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctat 132  Q
    ||||||||||||| |||||||  |||||||| |||||||||||||||| | ||||| |||||| ||||||||  || | ||||||| |||||| || |||    
T  46663735 tttgggaacttctacggtacactcgtaaattgaggtgtaccggtactcttgcttcataaatctataaattaatgatcaattttatgaaataaatagttat 46663636  T
Q  133 ttgttgatatttatattttagaaaat 158  Q
    |||| |  |||||||||||| |||||    
T  46663635 ttgtcggcatttatattttaaaaaat 46663610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 36 - 167
Target Start/End: Original strand, 30060530 - 30060661
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttg 135  Q
    |||||||||| |||||||  |||||||| |||||||||| ||||| | ||||| |||||| |||| |||| || | ||||||| |||||| || ||||||    
T  30060530 gggaacttctacggtacactcgtaaattgaggtgtaccgatactcttgcttcataaatctataaactaacgatcaattttatgaaataaatagttatttg 30060629  T
Q  136 ttgatatttatattttagaaaatgtcatttca 167  Q
    | |  |||||||||||||||||| | ||||||    
T  30060630 tcggcatttatattttagaaaatatgatttca 30060661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 26 - 136
Target Start/End: Complemental strand, 51282351 - 51282241
Alignment:
Q  26 tttttattttgggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaa 125  Q
    ||||| || ||| ||||||| ||||||| ||  || |||| |||||||||||||| |||||||||||| | |||||||||||| ||||||||| ||||||    
T  51282351 ttttttttatggaaacttctacggtacacccacaatttaaagtgtaccggtactcttacttcaaaaatttataaattaactatcatttttatgaaataaa 51282252  T
Q  126 gagctatttgt 136  Q
     || |||||||    
T  51282251 aagttatttgt 51282241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 58 - 171
Target Start/End: Original strand, 34936577 - 34936690
Alignment:
Q  58 taaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaa 157  Q
    |||||||||||||||||||||||||  |||| |||||  ||| ||||| || ||||||||| || ||| ||||||| || ||  ||||||||||||||||    
T  34936577 taaattaaggtgtaccggtactcctgtttcataaatcaataagttaacgatcatttttatgtaaaaaatagctattcgtcgacttttatattttagaaaa 34936676  T
Q  158 tgtcatttcataag 171  Q
    | | ||||||||||    
T  34936677 tattatttcataag 34936690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 49 - 170
Target Start/End: Original strand, 55060265 - 55060386
Alignment:
Q  49 gtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatat 148  Q
    ||||| || |||||||||||||| ||| |  |||| |||| |||||  ||||||||| || ||||||||| |||| |||||||| ||| ||  |||||||    
T  55060265 gtacacccttaaattaaggtgtatcggcatacctatttcataaatcaataaattaacaatcatttttatgtaatatagagctatctgtcgacttttatat 55060364  T
Q  149 tttagaaaatgtcatttcataa 170  Q
    |||||||||| |||||||||||    
T  55060365 tttagaaaatatcatttcataa 55060386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 39 - 167
Target Start/End: Complemental strand, 408466 - 408338
Alignment:
Q  39 aacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttg 138  Q
    ||||||| |||||||  |||||||| |||||||||||||||| | ||||| |||||| |||| |||| || | ||||||  |||||| || ||||||| |    
T  408466 aacttctacggtacactcgtaaattgaggtgtaccggtactcttgcttcataaatctataaactaacgatcaattttattaaataaatagttatttgtcg 408367  T
Q  139 atatttatattttagaaaatgtcatttca 167  Q
      |||||||||||||||||| | ||||||    
T  408366 gaatttatattttagaaaatatgatttca 408338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 48 - 210
Target Start/End: Complemental strand, 27539311 - 27539147
Alignment:
Q  48 ggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataattttt-atggaataaagagctatttgttgatatttat 146  Q
    ||||||||||||||||| ||||||||||||||| | |||  ||  | | ||||||||||||||||||| ||| |  ||| || | ||||||||||| |||    
T  27539311 ggtacatccgtaaattatggtgtaccggtactcttgcttataatttttataaattaactataattttttatgaagaaaataggtgtttgttgatatatat 27539212  T
Q  147 attttagaaaatgtcatttcataag-nnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    |||||||||||| |||||| ||| |        | |||||||||| |||||||||||||||||||    
T  27539211 attttagaaaatatcattttatatgaaaaaaaacatcatttcattttttataaaaatcatactaa 27539147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 41 - 167
Target Start/End: Original strand, 33491606 - 33491732
Alignment:
Q  41 cttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgat 140  Q
    ||||| |||||||  |||||||| | |||||||||||||| | ||||| |||||| |||| |||| || | ||||||| |||||| || ||||||| |      
T  33491606 cttctacggtacactcgtaaattgaagtgtaccggtactcttgcttcataaatctataaactaacgatcaattttatgaaataaatagttatttgtcggc 33491705  T
Q  141 atttatattttagaaaatgtcatttca 167  Q
    |||||||||||||||||| | ||||||    
T  33491706 atttatattttagaaaatatgatttca 33491732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 42 - 160
Target Start/End: Original strand, 34791886 - 34792004
Alignment:
Q  42 ttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgata 141  Q
    |||| |||||||||  ||||||||||||||||||||| |||  |||| |||| |  || ||||| |||||||||||| ||||||||| ||||| | ||      
T  34791886 ttctacggtacatctttaaattaaggtgtaccggtacacctgtttcataaatttacaagttaacgataatttttatgtaataaagagatatttatcgact 34791985  T
Q  142 tttatattttagaaaatgt 160  Q
    || ||||||||||||||||    
T  34791986 ttcatattttagaaaatgt 34792004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 158
Target Start/End: Complemental strand, 36188288 - 36188178
Alignment:
Q  48 ggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttata 147  Q
    ||||||||| | |||||||||||||| |||| |||| |||| |||| | ||| ||||| ||||||||||||  |||||||| ||||| | ||  ||||||    
T  36188288 ggtacatcctttaattaaggtgtaccagtacacctatttcataaatttataagttaacgataatttttatgtgataaagagatatttatcgacttttata 36188189  T
Q  148 ttttagaaaat 158  Q
    |||||||||||    
T  36188188 ttttagaaaat 36188178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 67 - 171
Target Start/End: Original strand, 16004564 - 16004669
Alignment:
Q  67 gtgtaccggtactcctacttcaaaaa-tctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 165  Q
    |||||||||||||| || |||||||| | | ||||||||  |||| ||| ||| |||||| || |||||||  |||||||||||||||||||| ||||||    
T  16004564 gtgtaccggtactcttatttcaaaaaatatataaattaaagataaatttaatgaaataaaaaggtatttgtcaatatttatattttagaaaatatcattt 16004663  T
Q  166 cataag 171  Q
    ||||||    
T  16004664 cataag 16004669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 42 - 171
Target Start/End: Complemental strand, 16917624 - 16917495
Alignment:
Q  42 ttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgata 141  Q
    |||| ||||||| || | ||||||| |||||| |||| |||| |||| |||||| ||| ||||| ||||||||||||  |||||||| ||||| | ||      
T  16917624 ttctacggtacacccttcaattaagatgtaccagtacacctatttcataaatctataagttaacgataatttttatgtgataaagagatatttatcgact 16917525  T
Q  142 tttatattttagaaaatgtcatttcataag 171  Q
    ||||||||||||||||| | || |||||||    
T  16917524 tttatattttagaaaatattatctcataag 16917495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 35 - 171
Target Start/End: Complemental strand, 32570775 - 32570640
Alignment:
Q  35 tgggaacttcttcggtacatc-cgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatt 133  Q
    ||||||||||| ||||||| | |  ||||| |||||||||||||||| ||||||| |||| | ||||||||| || | ||||||| |||||| || ||||    
T  32570775 tgggaacttctacggtacacctcacaaattgaggtgtaccggtactcttacttcataaatttataaattaacgatca-ttttatgaaataaataggtatt 32570677  T
Q  134 tgttgatatttatattttagaaaatgtcatttcataag 171  Q
    |||  ||| |||||||||||||||  ||||||||||||    
T  32570676 tgtcaata-ttatattttagaaaacatcatttcataag 32570640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 42 - 171
Target Start/End: Complemental strand, 56272978 - 56272849
Alignment:
Q  42 ttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgata 141  Q
    |||| ||||||| || ||||||||||||||||||||| |||  |||| |||||  |||  |||| || ||||||||| || |||||| ||||| | ||      
T  56272978 ttctacggtacacccttaaattaaggtgtaccggtacacctgtttcataaatcaataagctaacgatcatttttatgtaaaaaagagttatttatcgact 56272879  T
Q  142 tttatattttagaaaatgtcatttcataag 171  Q
    ||||||||||||||||| | ||||||||||    
T  56272878 tttatattttagaaaatattatttcataag 56272849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 158
Target Start/End: Original strand, 17616413 - 17616529
Alignment:
Q  42 ttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgata 141  Q
    |||| ||||||| || | |||||||||||||| |||| |||| || | |||| | ||||||||| ||||||||||||  |||||||| ||||| | ||      
T  17616413 ttctacggtacacccttcaattaaggtgtaccagtacacctattttataaatttataaattaacgataatttttatgtgataaagagatatttatcgact 17616512  T
Q  142 tttatattttagaaaat 158  Q
    |||||||||||||||||    
T  17616513 tttatattttagaaaat 17616529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 32 - 171
Target Start/End: Original strand, 42881036 - 42881175
Alignment:
Q  32 ttttgggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagcta 131  Q
    ||||||||||||||  ||||||   |||||||  ||||||||||||||  ||||||  |||||| ||||||||| || | ||||||| |||||| || ||    
T  42881036 ttttgggaacttctatggtacacttgtaaattgtggtgtaccggtacttttacttcttaaatctataaattaacaatcaattttatgaaataaatagtta 42881135  T
Q  132 tttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||| | |  |||||||||||||||||| || | |||||||    
T  42881136 tttatcggcatttatattttagaaaatatcttctcataag 42881175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 36 - 170
Target Start/End: Original strand, 48578907 - 48579041
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactat-aatttttatggaataaagagctattt 134  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||   ||| | |  | | |||||||||||| | |||||||| || ||| || | |||    
T  48578907 gggaacttctacggtacacccgtaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtgttt 48579005  T
Q  135 gttgatatttatattttagaaaatgtcatttcataa 170  Q
    ||||| || ||||||||||||||| |||||| ||||    
T  48579006 gttgacatatatattttagaaaatatcattttataa 48579041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 47 - 170
Target Start/End: Original strand, 49143958 - 49144081
Alignment:
Q  47 cggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttat 146  Q
    |||||||||| ||||||||| ||||||| ||   ||| |||| ||||   ||| ||||  || ||||||||| ||||||||| ||||||||||  |||||    
T  49143958 cggtacatccttaaattaagatgtaccgatatatctatttcataaattaataagttaatgattatttttatgtaataaagagatatttgttgacttttat 49144057  T
Q  147 attttagaaaatgtcatttcataa 170  Q
    |||||||||||| | |||||||||    
T  49144058 attttagaaaatattatttcataa 49144081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 97 - 171
Target Start/End: Original strand, 42080389 - 42080463
Alignment:
Q  97 taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||||| || ||||||||| |||||| |  |||||||| ||||||||||||||||||| ||||| |||||||    
T  42080389 taaattaacgatcatttttatgaaataaaaaattatttgtttatatttatattttagaaaacgtcatatcataag 42080463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 158
Target Start/End: Complemental strand, 50189419 - 50189297
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttg 135  Q
    |||||||||| | |||||  |||||||| ||||||||| |||||| | ||||| |||||| |||| |||| || | ||||||| |||||| |  ||||||    
T  50189419 gggaacttctacagtacactcgtaaattgaggtgtaccagtactcttgcttcataaatctataaactaacgatcaattttatgaaataaataaatatttg 50189320  T
Q  136 ttgatatttatattttagaaaat 158  Q
    | |  ||||||||||||||||||    
T  50189319 tcggcatttatattttagaaaat 50189297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 42 - 168
Target Start/End: Complemental strand, 54851421 - 54851295
Alignment:
Q  42 ttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgata 141  Q
    |||| ||||||| || ||||||||||||||||||||| |||| |||| || ||  ||| ||||| || ||||||||| ||||||||| | | | | ||      
T  54851421 ttctacggtacacccttaaattaaggtgtaccggtacacctatttcataattcaataagttaacaatcatttttatgtaataaagagatgtctatcgact 54851322  T
Q  142 tttatattttagaaaatgtcatttcat 168  Q
    ||||||||||| ||||| |||||||||    
T  54851321 tttatattttaaaaaatatcatttcat 54851295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 171
Target Start/End: Original strand, 9579687 - 9579799
Alignment:
Q  58 taaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaa 157  Q
    |||||| || ||||| |||||||||||||||||||| | ||| ||||| || | ||||||| ||||||||| ||||  |  |||||||||||||||||||    
T  9579687 taaattgagttgtactggtactcctacttcaaaaatttataatttaacaatta-ttttatgaaataaagagttattcatcaatatttatattttagaaaa 9579785  T
Q  158 tgtcatttcataag 171  Q
      |||||| |||||    
T  9579786 catcattttataag 9579799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 171
Target Start/End: Original strand, 9585382 - 9585494
Alignment:
Q  58 taaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaa 157  Q
    |||||| || ||||| |||||||||||||||||||| | ||| ||||| || | ||||||| ||||||||| ||||  |  |||||||||||||||||||    
T  9585382 taaattgagttgtactggtactcctacttcaaaaatttataatttaacaatta-ttttatgaaataaagagttattcatcaatatttatattttagaaaa 9585480  T
Q  158 tgtcatttcataag 171  Q
      |||||| |||||    
T  9585481 catcattttataag 9585494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 171
Target Start/End: Original strand, 46564787 - 46564848
Alignment:
Q  110 atttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||||| ||||||||| ||||||||||  ||||||||||||||||| | ||||||||||    
T  46564787 atttttatgtaataaagagatatttgttgacttttatattttagaaaatattatttcataag 46564848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 171
Target Start/End: Complemental strand, 52940864 - 52940752
Alignment:
Q  58 taaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaa 157  Q
    |||||| ||||||||||||| || |||||||||||| |  || ||||  || | ||||||| ||||||||| ||||| | ||||||||||||||||||||    
T  52940864 taaattgaggtgtaccggtattcttacttcaaaaatttagaatttaaggatta-ttttatgaaataaagagttatttatcgatatttatattttagaaaa 52940766  T
Q  158 tgtcatttcataag 171  Q
      |||||| |||||    
T  52940765 catcattttataag 52940752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 171
Target Start/End: Original strand, 25607714 - 25607824
Alignment:
Q  59 aaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaat 158  Q
    ||||| ||||||||||||||||  |||||| |||| | ||||||||| || | ||||||| |||||| || |||||||  ||| |||||||||||||||     
T  25607714 aaattgaggtgtaccggtactctcacttcataaatttataaattaacgatta-ttttatgaaataaataggtatttgtcaata-ttatattttagaaaac 25607811  T
Q  159 gtcatttcataag 171  Q
     ||||||||||||    
T  25607812 atcatttcataag 25607824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 158
Target Start/End: Original strand, 27734916 - 27735032
Alignment:
Q  42 ttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgata 141  Q
    |||| |||||||||| | ||||||| |||||| |||| |||  |||| |||||| ||| ||||| |||||||||||   |||||||| ||||| | ||      
T  27734916 ttctacggtacatccttgaattaagatgtaccagtacacctgtttcataaatctataagttaacgataatttttatatgataaagagatatttatcgact 27735015  T
Q  142 tttatattttagaaaat 158  Q
    |||||||||||||||||    
T  27735016 tttatattttagaaaat 27735032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 75 - 171
Target Start/End: Complemental strand, 43363695 - 43363599
Alignment:
Q  75 gtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    |||||||||||||| || | | ||||||||| || ||||||||| |||||| || ||||| || |||||||||||||| ||||  ||| ||||||||    
T  43363695 gtactcctacttcataattttataaattaacgatcatttttatgaaataaatagttatttattaatatttatattttataaaacatcaattcataag 43363599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 80
Target Start/End: Complemental strand, 52592199 - 52592155
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactc 80  Q
    |||||||||| |||||||||||||||||| |||||||||||||||    
T  52592199 gggaacttctacggtacatccgtaaattacggtgtaccggtactc 52592155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 171
Target Start/End: Original strand, 41759660 - 41759794
Alignment:
Q  37 ggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactat-aatttttatggaataaagagctatttg 135  Q
    ||||||||| ||||||| ||||||||||| ||||||||||||||   ||| | |  | | |||||||||||| | |||||||| || ||| || | ||||    
T  41759660 ggaacttctacggtacacccgtaaattaaagtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtgtttg 41759758  T
Q  136 ttgatatttatattttagaaaatgtcatttcataag 171  Q
    |||| || ||||||||||||||| |||||| |||||    
T  41759759 ttgacatatatattttagaaaatatcattttataag 41759794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 171
Target Start/End: Complemental strand, 46549163 - 46549025
Alignment:
Q  32 ttttgggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagcta 131  Q
    |||||||||||||| || ||||  ||||||||| | ||||| | ||||| | |||   |||||| ||||||||| |||| ||||||| |||||| || ||    
T  46549163 ttttgggaacttctacgatacactcgtaaattatgatgtactgatactcttgctttctaaatctataaattaacgataaattttatgaaataaatagtta 46549064  T
Q  132 tttgttgatatttatattttagaaaatgtcatttcataag 171  Q
     ||||||  |||||||||||| ||||| | ||||||||||    
T  46549063 -ttgttggcatttatattttaaaaaatattatttcataag 46549025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 97 - 171
Target Start/End: Complemental strand, 27636085 - 27636011
Alignment:
Q  97 taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||||  || |||| |||| |||||| ||||||||||  |||||||||||||||||||  ||||||||||||    
T  27636085 taaattaatgatcatttatatgaaataaaaagctatttgtccatatttatattttagaaaacatcatttcataag 27636011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 210
Target Start/End: Original strand, 30951146 - 30951297
Alignment:
Q  58 taaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaa 157  Q
    |||||||| ||||||| |||| |||| |||| |||||  ||||||| | || ||||||||| ||||||||| ||||| |  |  ||||||||||||||||    
T  30951146 taaattaaagtgtaccagtacacctatttcataaatcaataaattatcgatcatttttatgtaataaagagatatttatcaacttttatattttagaaaa 30951245  T
Q  158 tgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    | | |||| |||||       |||||||||||  ||||||| |||||||||||    
T  30951246 tattattttataag-aaaaaacgtcatttcatcctttataagaatcatactaa 30951297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 210
Target Start/End: Complemental strand, 39513040 - 39512889
Alignment:
Q  58 taaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaa 157  Q
    ||||||||||||||||||||| |||| |||| || ||  ||| ||||  ||  |||||||| ||||||||| | ||| | ||  ||||||||||| ||||    
T  39513040 taaattaaggtgtaccggtacacctatttcataattcaataagttaataatcttttttatgtaataaagagatgtttatcgacttttatattttaaaaaa 39512941  T
Q  158 tgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    | ||||||||||||       | |||||||||  |||||||||||||||||||    
T  39512940 tatcatttcataag-aaaaaacatcatttcatcatttataaaaatcatactaa 39512889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 97 - 167
Target Start/End: Original strand, 42680660 - 42680730
Alignment:
Q  97 taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttca 167  Q
    ||||||||| || | ||||||| |||||| ||||||||||  |||||||||||||||||||  ||||||||    
T  42680660 taaattaacgatcacttttatgaaataaaaagctatttgtcaatatttatattttagaaaacatcatttca 42680730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 152
Target Start/End: Original strand, 45692621 - 45692739
Alignment:
Q  35 tgggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataa-tttttatggaataaagagctatt 133  Q
    ||||||||||| |||||||  |||||| |||||||||||| ||||| | ||||  || | | ||||| ||| |||| |||||||| |||||| |||||||    
T  45692621 tgggaacttctacggtacactcgtaaaataaggtgtaccgatactcttgcttcttaattttataaatgaacgataattttttatgtaataaatagctatt 45692720  T
Q  134 tgttgatatttatatttta 152  Q
    | |  ||||||||||||||    
T  45692721 tatcaatatttatatttta 45692739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 67 - 210
Target Start/End: Original strand, 46630676 - 46630819
Alignment:
Q  67 gtgtaccggtactcctacttca-aaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 165  Q
    |||||||||||||| |  |||| ||||| | ||||||||| || | ||| ||| |||||| || |||||||  |||||||||||||||||||  ||||||    
T  46630676 gtgtaccggtactcttgtttcacaaaatatataaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcattt 46630775  T
Q  166 cataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    ||||||       | ||||||||||||||||||  ||||||||||    
T  46630776 cataag-aaaaatcatcatttcattgtttataaggatcatactaa 46630819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 97 - 167
Target Start/End: Complemental strand, 48018474 - 48018404
Alignment:
Q  97 taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttca 167  Q
    ||||||||  || ||||||||| |||||| | |||||||||||| ||||||||||||||||| | ||||||    
T  48018474 taaattaatgattatttttatgaaataaaaaactatttgttgatttttatattttagaaaatataatttca 48018404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 168
Target Start/End: Complemental strand, 50716597 - 50716487
Alignment:
Q  58 taaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaa 157  Q
    ||||||||||||||||||||| |||| |||| || ||  ||| ||||| || ||||||||| ||||||||| | | | | ||  ||||||||||| ||||    
T  50716597 taaattaaggtgtaccggtacacctatttcataattcaataagttaacaatcatttttatgtaataaagagatgtctatcgacttttatattttaaaaaa 50716498  T
Q  158 tgtcatttcat 168  Q
    | |||||||||    
T  50716497 tatcatttcat 50716487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 97 - 171
Target Start/End: Complemental strand, 52257477 - 52257403
Alignment:
Q  97 taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||||| || ||||| ||| |||||| || |||||||  |||||||||||||||||||  ||||||||||||    
T  52257477 taaattaacgatcattttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataag 52257403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 30 - 171
Target Start/End: Complemental strand, 55722889 - 55722748
Alignment:
Q  30 tattttgggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactat-aatttttatggaataaagag 128  Q
    ||||| |||||||| | ||||||| ||| ||||||||||||||||||||||   ||| | |  | | |||||||||||| | |||||||| || ||| ||    
T  55722889 tatttagggaacttttacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaatag 55722791  T
Q  129 ctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
     | |||||||| || ||||||||||||||| |||||| |||||    
T  55722790 gtgtttgttgacatatatattttagaaaatatcattttataag 55722748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 206
Target Start/End: Original strand, 34584206 - 34584351
Alignment:
Q  59 aaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaat 158  Q
    ||||| |||||||||| ||||||  |||||||||| | ||| ||||| || ||||| ||| ||||||||| ||||| |  |||||||||||||| ||||     
T  34584206 aaattgaggtgtaccgatactccagcttcaaaaatttataatttaacgattatttt-atgaaataaagagttatttataaatatttatattttataaaac 34584304  T
Q  159 gtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcata 206  Q
     |||||| |||||       | |||||||||||||||||| |||||||    
T  34584305 atcattttataag-aaaaaacatcatttcattgtttataataatcata 34584351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 206
Target Start/End: Original strand, 36631111 - 36631205
Alignment:
Q  111 tttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcata 206  Q
    |||||||| |||||| | ||||||||| |||||||||||||| ||||  ||||||||||||       | |||||||||||||||||| |||||||    
T  36631111 tttttatgaaataaataactatttgttaatatttatattttataaaacatcatttcataag-aaaaaacatcatttcattgtttataagaatcata 36631205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 171
Target Start/End: Original strand, 38955073 - 38955178
Alignment:
Q  67 gtgtaccggtactcctacttca-aaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 165  Q
    |||||||||||||| |  |||| ||||| | ||||||||  || | ||| ||| |||||| || |||||||  |||||||||||||||||||| ||||||    
T  38955073 gtgtaccggtactcttgtttcataaaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaatatcattt 38955172  T
Q  166 cataag 171  Q
    ||||||    
T  38955173 cataag 38955178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 152
Target Start/End: Original strand, 43349090 - 43349182
Alignment:
Q  59 aaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatatttta 152  Q
    ||||| |||||||||||||||||| ||||||| || | ||| ||||| || | ||||||| ||||||||| ||||| |  ||||||||||||||    
T  43349090 aaattgaggtgtaccggtactcctgcttcaaatatttataatttaacgatta-ttttatgaaataaagagttatttatcaatatttatatttta 43349182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 158
Target Start/End: Original strand, 43518437 - 43518498
Alignment:
Q  97 taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaat 158  Q
    ||||||||||||||| ||||   |||||||| || ||||||||| |||||||||||||||||    
T  43518437 taaattaactataatatttacaaaataaagaactttttgttgatttttatattttagaaaat 43518498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 171
Target Start/End: Complemental strand, 46548762 - 46548633
Alignment:
Q  42 ttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgata 141  Q
    |||| ||||||| || ||||||||||||||||||||| |||| |||  || ||  ||| ||||| || |||||| || ||||||||| | | | | ||      
T  46548762 ttctacggtacacccttaaattaaggtgtaccggtacacctatttcttaattcaataagttaacaatcatttttttgtaataaagagatgtctatcgact 46548663  T
Q  142 tttatattttagaaaatgtcatttcataag 171  Q
    ||||||||||| ||||| ||||||||||||    
T  46548662 tttatattttaaaaaatatcatttcataag 46548633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 80
Target Start/End: Complemental strand, 47302395 - 47302342
Alignment:
Q  27 ttttattttgggaacttcttcggtacatccgtaaattaaggtgtaccggtactc 80  Q
    |||| ||| |||||||||| ||||||| |||||||||| |||||||||||||||    
T  47302395 ttttctttcgggaacttctacggtacacccgtaaattacggtgtaccggtactc 47302342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 152
Target Start/End: Original strand, 49286712 - 49286804
Alignment:
Q  59 aaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatatttta 152  Q
    ||||| |||||||||||||||||||||||||| || |  || ||||| || | ||||||| ||||||||| ||||| || |||||||| |||||    
T  49286712 aaattgaggtgtaccggtactcctacttcaaatatttacaatttaacgatta-ttttatgaaataaagagttatttattaatatttatgtttta 49286804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 171
Target Start/End: Complemental strand, 54499950 - 54499845
Alignment:
Q  67 gtgtaccggtactcctacttca-aaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 165  Q
    |||||||||||||| |  |||| ||||| | ||||||||| || | ||| |||  ||||| || |||||||| |||||||||||||||||||  ||||||    
T  54499950 gtgtaccggtactcttgtttcacaaaatttataaattaacgatcactttaatgagataaaaaggtatttgttaatatttatattttagaaaacatcattt 54499851  T
Q  166 cataag 171  Q
    ||||||    
T  54499850 cataag 54499845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 171
Target Start/End: Complemental strand, 56017127 - 56017066
Alignment:
Q  110 atttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||||| |||||| ||||||||||  |||||| ||||||| ||||| ||||||||||||    
T  56017127 atttttatgaaataaaaagctatttgtcaatatttctattttaaaaaatatcatttcataag 56017066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 5970775 - 5970835
Alignment:
Q  111 tttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    |||||||| |||||| ||||||||||  |||||||||||||| | ||| ||||||||||||    
T  5970775 tttttatgtaataaatagctatttgtcaatatttatattttatagaatatcatttcataag 5970835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 11109596 - 11109640
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactc 80  Q
    |||||||||| ||||||| ||| ||||||||||||||||||||||    
T  11109596 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 11109640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 117
Target Start/End: Complemental strand, 18982073 - 18982014
Alignment:
Q  57 gtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttat 117  Q
    |||||||||||||||||  ||||| ||||||| |||||| |||||||||||| ||||||||    
T  18982073 gtaaattaaggtgtacca-tactcttacttcataaatctataaattaactatcatttttat 18982014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 37855526 - 37855486
Alignment:
Q  38 gaacttcttcggtacatccgtaaattaaggtgtaccggtac 78  Q
    |||||||| ||||||||| ||||||||||||||||||||||    
T  37855526 gaacttctacggtacatctgtaaattaaggtgtaccggtac 37855486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 171
Target Start/End: Original strand, 13548481 - 13548540
Alignment:
Q  112 ttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||| |||||||||||||||| | |||||||||||||| ||||  | ||||||||||    
T  13548481 ttttatgaaataaagagctatttgctaatatttatattttataaaacattatttcataag 13548540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 152
Target Start/End: Original strand, 24979932 - 24980058
Alignment:
Q  26 tttttattttgggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataattttt-atggaataa 124  Q
    ||||| ||||| |||||||| |||||||  |  ||| |||||||||||||||||  | ||||| |  | | ||||||||| ||||||||| ||| |||||    
T  24979932 tttttcttttgagaacttctacggtacactcacaaaataaggtgtaccggtactattgcttcatattt-tataaattaacgataattttttatgtaataa 24980030  T
Q  125 agagctatttgttgatatttatatttta 152  Q
    | ||||||||||  ||||||||||||||    
T  24980031 atagctatttgtcaatatttatatttta 24980058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 171
Target Start/End: Original strand, 27761429 - 27761536
Alignment:
Q  65 aggtgtaccggtactcctacttcaaaaatctttaaattaactataattttt-atggaataaagagctatttgttgatatttatattttagaaaatgtcat 163  Q
    ||||||| |||||||| | ||||| || | | | ||||||| ||||||||| ||| |||||| ||||||||||  |||||||||||||| | ||  ||||    
T  27761429 aggtgtatcggtactcttgcttcataattttatgaattaacgataattttttatgtaataaatagctatttgtcaatatttatattttatagaacatcat 27761528  T
Q  164 ttcataag 171  Q
    ||||||||    
T  27761529 ttcataag 27761536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 171
Target Start/End: Complemental strand, 28038092 - 28037955
Alignment:
Q  35 tgggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataa--tttttatggaataaagagctat 132  Q
    ||||||||||| ||||||| ||  ||||||||||||||||||||||   ||| | |  | | |||||||||||| |  |||||||| || ||| || | |    
T  28038092 tgggaacttctacggtacacccacaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcatttttttatgaaagaaataggttt 28037994  T
Q  133 ttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||| || ||||||||||||||| |||||| |||||    
T  28037993 ttgttgaaatatatattttagaaaatatcattttataag 28037955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 167
Target Start/End: Complemental strand, 37748833 - 37748702
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttg 135  Q
    |||||||||| |||||||   ||| ||| |||| ||| ||||||| |  |||| |||||| |||| |||| || | ||||||| |||||| || ||||||    
T  37748833 gggaacttctacggtacactggtacattgaggtatactggtactcttgtttcataaatctataaactaacgatcaattttatgaaataaatagttatttg 37748734  T
Q  136 ttgatatttatattttagaaaatgtcatttca 167  Q
    | |  |||||||||||| ||||||| ||||||    
T  37748733 tcggcatttatattttaaaaaatgtgatttca 37748702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 171
Target Start/End: Complemental strand, 40319394 - 40319271
Alignment:
Q  48 ggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttata 147  Q
    |||||| || |||||||| |||||||||||| |||| |||| |||||  ||| ||| | || |||||| || ||||||||| ||||| |  |  ||||||    
T  40319394 ggtacacccttaaattaaagtgtaccggtacacctatttcataaatcaataagttatcgatcatttttctgtaataaagagatatttatcaacttttata 40319295  T
Q  148 ttttagaaaatgtcatttcataag 171  Q
    ||||||||||| | |||| |||||    
T  40319294 ttttagaaaatattattttataag 40319271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 171
Target Start/End: Original strand, 46222077 - 46222128
Alignment:
Q  120 aataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    |||||| || |||||||  |||||||||||||||||||| ||||||||||||    
T  46222077 aataaaaaggtatttgtcaatatttatattttagaaaatatcatttcataag 46222128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 168
Target Start/End: Complemental strand, 48058885 - 48058750
Alignment:
Q  33 tttgggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctat 132  Q
    |||||||  |||| ||||||| || ||||||||||| || |||||| |||  |||| |||||  |||  |||| || ||||||||| || ||| | ||||    
T  48058885 tttgggagtttctacggtacacccttaaattaaggtatatcggtacacctgtttcataaatcaataagctaacgatcatttttatgtaaaaaaaaactat 48058786  T
Q  133 ttgttgatatttatattttagaaaatgtcatttcat 168  Q
    || | ||  ||||||||||||||||| |||||||||    
T  48058785 ttatcgacttttatattttagaaaatatcatttcat 48058750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 171
Target Start/End: Original strand, 52104420 - 52104543
Alignment:
Q  48 ggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttata 147  Q
    ||||||||| |||||||| ||||||| ||||  ||| |||| |||||  ||| ||| | || ||||||||| ||||||||| ||||| |  |  ||||||    
T  52104420 ggtacatccttaaattaaagtgtaccagtacatctatttcataaatcaataagttatcgatcatttttatgtaataaagagatatttatcaacttttata 52104519  T
Q  148 ttttagaaaatgtcatttcataag 171  Q
    ||||||||||| | |||| |||||    
T  52104520 ttttagaaaatattattttataag 52104543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 93
Target Start/End: Original strand, 595320 - 595354
Alignment:
Q  59 aaattaaggtgtaccggtactcctacttcaaaaat 93  Q
    ||||| |||||||||||||||||||||||||||||    
T  595320 aaattgaggtgtaccggtactcctacttcaaaaat 595354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 206
Target Start/End: Original strand, 9356457 - 9356552
Alignment:
Q  111 tttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcata 206  Q
    |||||||  |||||| ||||||||||| |||||||||||||| | ||| | ||||||||||         |||||||||||||||||| |||||||    
T  9356457 tttttataaaataaatagctatttgttaatatttatattttatagaatattatttcataagaaaaaaaaatcatttcattgtttataagaatcata 9356552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 147
Target Start/End: Complemental strand, 22077742 - 22077661
Alignment:
Q  65 aggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttata 147  Q
    |||||||||||||||||| |||||||||| | ||| ||||| || | ||||||| ||||||||| ||||| |  |||||||||    
T  22077742 aggtgtaccggtactcctgcttcaaaaatttataatttaacgatca-ttttatgaaataaagagttatttatcaatatttata 22077661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 160
Target Start/End: Complemental strand, 24347219 - 24347117
Alignment:
Q  58 taaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaa 157  Q
    ||||||| ||||||| ||||  |||  |||| ||||||  |||||||| |||||||||||| ||| ||||| ||||| | ||  || |||||||||||||    
T  24347219 taaattagggtgtactggtatacctgtttcataaatctacaaattaacgataatttttatgtaatgaagagatatttatcgactttcatattttagaaaa 24347120  T
Q  158 tgt 160  Q
    |||    
T  24347119 tgt 24347117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 158
Target Start/End: Complemental strand, 45954034 - 45953936
Alignment:
Q  60 aattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaat 158  Q
    |||||||||||||| |||| | || |||| |||||| ||| ||||| ||||||||||||  ||||| |  ||||| | ||  |||||||||||||||||    
T  45954034 aattaaggtgtaccagtacacatatttcataaatctataagttaacgataatttttatgtgataaacaaatatttatcgacttttatattttagaaaat 45953936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 171
Target Start/End: Original strand, 1605677 - 1605726
Alignment:
Q  122 taaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    |||| |||| |||||||||| |||||||||||||||  ||||||||||||    
T  1605677 taaatagctttttgttgataattatattttagaaaacatcatttcataag 1605726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 110 - 171
Target Start/End: Complemental strand, 2443670 - 2443610
Alignment:
Q  110 atttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||||| ||||||||||||||| || | |||  ||||||| ||||||||||||||||||    
T  2443670 atttttatgaaataaagagctattt-ttcaaattgttattttataaaatgtcatttcataag 2443610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 152
Target Start/End: Complemental strand, 4720881 - 4720760
Alignment:
Q  32 ttttgggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactat-aatttttatggaataaagagct 130  Q
    |||||||||||| | |||||||  | |||| | ||||||| |||||||||| ||||  || | | ||||| ||| || |||||||||| | |||| ||||    
T  4720881 ttttgggaacttatacggtacactcataaaatgaggtgtatcggtactcctgcttcttaattttataaatgaacgatcaatttttatgtagtaaatagct 4720782  T
Q  131 atttgttgatatttatatttta 152  Q
    ||||||  ||||||||||||||    
T  4720781 atttgtcaatatttatatttta 4720760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 67 - 171
Target Start/End: Original strand, 10779022 - 10779127
Alignment:
Q  67 gtgtaccggtactcctacttca-aaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 165  Q
    |||||||||||||| |  |||| ||||| | ||||||||  || | ||| ||| |||||| || |||||||  |||||||||||||||||||| ||||||    
T  10779022 gtgtaccggtactcttgtttcacaaaatatataaattaaagatcactttaatgaaataaaaagatatttgtcaatatttatattttagaaaatatcattt 10779121  T
Q  166 cataag 171  Q
    | ||||    
T  10779122 cgtaag 10779127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 59 - 152
Target Start/End: Complemental strand, 19527106 - 19527014
Alignment:
Q  59 aaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatatttta 152  Q
    ||||| |||||||||||||||||| ||||||| || |  || ||||| || | ||||||| ||||||||| ||||| |  ||||||||||||||    
T  19527106 aaattgaggtgtaccggtactcctgcttcaaatatttacaatttaacgatta-ttttatgaaataaagagttatttatccatatttatatttta 19527014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 38 - 75
Target Start/End: Complemental strand, 29646995 - 29646958
Alignment:
Q  38 gaacttcttcggtacatccgtaaattaaggtgtaccgg 75  Q
    |||||||| | |||||||||||||||||||||||||||    
T  29646995 gaacttctaccgtacatccgtaaattaaggtgtaccgg 29646958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 30891281 - 30891310
Alignment:
Q  181 tcatttcattgtttataaaaatcatactaa 210  Q
    ||||||||||||||||||||||||||||||    
T  30891281 tcatttcattgtttataaaaatcatactaa 30891310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 46004468 - 46004497
Alignment:
Q  181 tcatttcattgtttataaaaatcatactaa 210  Q
    ||||||||||||||||||||||||||||||    
T  46004468 tcatttcattgtttataaaaatcatactaa 46004497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 110 - 171
Target Start/End: Complemental strand, 47920607 - 47920546
Alignment:
Q  110 atttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||||| |||||| || ||| ||| ||||||||||||||||||||| | |||| |||||    
T  47920607 atttttatgaaataaaaagttatatgtcgatatttatattttagaaaatattattttataag 47920546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 48058758 - 48058729
Alignment:
Q  181 tcatttcattgtttataaaaatcatactaa 210  Q
    ||||||||||||||||||||||||||||||    
T  48058758 tcatttcattgtttataaaaatcatactaa 48058729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 59 - 152
Target Start/End: Original strand, 53973480 - 53973572
Alignment:
Q  59 aaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatatttta 152  Q
    ||||| |||||||||||||||||| ||||||| || |  || ||||| || | ||||||| ||||||||| ||||| |  ||||||||||||||    
T  53973480 aaattgaggtgtaccggtactcctgcttcaaatatttacaatttaacgatta-ttttatgaaataaagagttatttatcaatatttatatttta 53973572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 170
Target Start/End: Complemental strand, 24292354 - 24292250
Alignment:
Q  67 gtgtaccggtactcctacttca-aaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 165  Q
    |||||||||||||| |  |||| ||||| | ||||||||  || | ||| ||| |||||| || |||||||  |||||||||||||||||||  ||||||    
T  24292354 gtgtaccggtactcttgtttcacaaaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcattt 24292255  T
Q  166 cataa 170  Q
    |||||    
T  24292254 cataa 24292250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 32288979 - 32289039
Alignment:
Q  111 tttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    |||||||| |||||| ||||||||||| ||||||||| |||| | ||  ||||||||||||    
T  32288979 tttttatgaaataaatagctatttgttaatatttatactttatagaacatcatttcataag 32289039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 170
Target Start/End: Complemental strand, 44998786 - 44998682
Alignment:
Q  67 gtgtaccggtactcctacttca-aaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 165  Q
    |||||||||||||| |  |||| ||||| | ||||||||  || | ||| ||| |||||| || |||||||  |||||||||||||||||||  ||||||    
T  44998786 gtgtaccggtactcttgtttcacaaaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcattt 44998687  T
Q  166 cataa 170  Q
    |||||    
T  44998686 cataa 44998682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 53451764 - 53451820
Alignment:
Q  102 taactataatttttatggaataaagagctatttgttgatatttatattttagaaaat 158  Q
    |||| |||||||||||| || |||||||||||| | ||  |||||||||||||||||    
T  53451764 taacgataatttttatgtaacaaagagctatttttcgacttttatattttagaaaat 53451820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 157
Target Start/End: Original strand, 55129831 - 55129891
Alignment:
Q  97 taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaa 157  Q
    ||||||||  || |||| |||| |||||| ||||||||||  |||||||||||||||||||    
T  55129831 taaattaatgatcatttatatgaaataaaaagctatttgtccatatttatattttagaaaa 55129891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 122; Significance: 9e-63; HSPs: 87)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 36 - 210
Target Start/End: Original strand, 21288813 - 21288987
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttg 135  Q
    ||||| |||| ||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  21288813 gggaatttctacggtacacccgcaaattaaggtgtatcggtactcctacttcaaaaatctttaaattaactattatttttatggaatatagagctatttg 21288912  T
Q  136 ttgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    ||||||||||||||||||||||||||||||||||||       |||||||||||||||||| |||||||||||||    
T  21288913 ttgatatttatattttagaaaatgtcatttcataagaaaaaaacgtcatttcattgtttatgaaaatcatactaa 21288987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 36 - 210
Target Start/End: Complemental strand, 27647886 - 27647712
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttg 135  Q
    |||||||||| ||||||| ||| |||||||||||||  |||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  27647886 gggaacttctacggtacacccgcaaattaaggtgtattggtactcctatttcaaaaatctttaaattaactattatttttatggaataaagagatatttg 27647787  T
Q  136 ttgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    ||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||    
T  27647786 ttgatatttatattttagaaaatgtcatttcataagaaaaaaatgtcatttcattgtttataaaaatcatactaa 27647712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 36 - 209
Target Start/End: Original strand, 25592012 - 25592186
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtac--cggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatt 133  Q
    |||||||||| ||||||| ||||||||||||||||||  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||    
T  25592012 gggaacttctacggtacacccgtaaattaaggtgtacatcggtactcctacttcaaaaatcttttaattaactattatttttatggaataaagaactatt 25592111  T
Q  134 tgttgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatacta 209  Q
    ||||||||||||||||||||||||||| ||||||||||       | |||||||||||||||||||||||||||||    
T  25592112 tgttgatatttatattttagaaaatgttatttcataag-aaaaaacatcatttcattgtttataaaaatcatacta 25592186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 48 - 170
Target Start/End: Original strand, 3082190 - 3082312
Alignment:
Q  48 ggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttata 147  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  3082190 ggtacatccgcaaattaaggtgtatcggtactcctacttcaaaaatctttaaattaactattatttttatggaataaaaagctatttgttgatatttata 3082289  T
Q  148 ttttagaaaatgtcatttcataa 170  Q
    |||||||||||||||||||||||    
T  3082290 ttttagaaaatgtcatttcataa 3082312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 47 - 210
Target Start/End: Complemental strand, 7672195 - 7672032
Alignment:
Q  47 cggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttat 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||  | ||| |||||||||| ||||||| ||||||||||| |||||||||||||||||    
T  7672195 cggtacatccgtaaattaaggtgtaccggtactcctacttcaaattttttttaattaactattatttttacggaataaagagatatttgttgatatttat 7672096  T
Q  147 attttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    ||||||||||||||||||| |||||       | ||||||||||||||||||||||||||||||    
T  7672095 attttagaaaatgtcattttataagaaaaaaacatcatttcattgtttataaaaatcatactaa 7672032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 32 - 210
Target Start/End: Complemental strand, 19547899 - 19547720
Alignment:
Q  32 ttttgggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaacta-taatttttatggaataaagagct 130  Q
    |||||||||||||| ||||||| ||  |||||||||||||||||||||||||||| ||||||||||||||||| || || ||||||||||||||||||||    
T  19547899 ttttgggaacttctacggtacacccacaaattaaggtgtaccggtactcctactttaaaaatctttaaattaattattattttttatggaataaagagct 19547800  T
Q  131 atttgttgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    ||||||| |||||||||||||||||||||||||||   |||       ||||||||||||||||||||||||||||||||    
T  19547799 atttgttaatatttatattttagaaaatgtcattttgcaagaaaaaaacgtcatttcattgtttataaaaatcatactaa 19547720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 47 - 206
Target Start/End: Original strand, 788484 - 788642
Alignment:
Q  47 cggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttat 146  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  788484 cggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactattatttttatggaataaagagctatttgttgatatttat 788583  T
Q  147 attttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcata 206  Q
    ||||||  |||||| ||||||||||       | ||||||||||||||||||||||||||    
T  788584 attttatgaaatgttatttcataag-aaaaaacatcatttcattgtttataaaaatcata 788642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 39 - 210
Target Start/End: Original strand, 29628986 - 29629156
Alignment:
Q  39 aacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttg 138  Q
    ||||||| || |||||||  ||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||    
T  29628986 aacttctacgatacatccacaaattaaggtgtatcggtactcctacttcaaaactctttaaattaactattatttttttggaataaagagctatttgttg 29629085  T
Q  139 atatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    |||||||||||||| ||||||||||||||||||       | ||||||||||||||||||||||||||||||    
T  29629086 atatttatattttaaaaaatgtcatttcataag-aaaaaacatcatttcattgtttataaaaatcatactaa 29629156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 59 - 203
Target Start/End: Original strand, 53516605 - 53516749
Alignment:
Q  59 aaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaat 158  Q
    |||||||||||||||||||||| ||||| |||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  53516605 aaattaaggtgtaccggtactcttactttaaaaaattttaaattaactattatttttatggaataaagagctatttgttgatatttatattttagaaaat 53516704  T
Q  159 gtcatttcataagnnnnnnncgtcatttcattgtttataaaaatc 203  Q
    |||||||||||||       |||||||||||||||||||||||||    
T  53516705 gtcatttcataagaaaaaaacgtcatttcattgtttataaaaatc 53516749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 59 - 169
Target Start/End: Complemental strand, 3136645 - 3136535
Alignment:
Q  59 aaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaat 158  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  3136645 aaattaaagtgtaccggtactcctacttcaaaaacctttaaattaactattatttttatggaataaagagctatttgttgatatttatattttagaaaat 3136546  T
Q  159 gtcatttcata 169  Q
    |||||||||||    
T  3136545 gtcatttcata 3136535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 36 - 209
Target Start/End: Original strand, 4663146 - 4663320
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttg 135  Q
    |||||||||| ||||||||||| |||||||||||||||||||||| | ||| |||||  |||||||||||||| |||||||| ||||| || ||||||||    
T  4663146 gggaacttctacggtacatccgcaaattaaggtgtaccggtactcatgctttaaaaaaatttaaattaactattatttttatagaatatagtgctatttg 4663245  T
Q  136 ttgatatttatattttagaaaatgtcatttcataag-nnnnnnncgtcatttcattgtttataaaaatcatacta 209  Q
    ||||||||||||||||| |||||||||||| ||| |        | |||||||||||||||||||||||||||||    
T  4663246 ttgatatttatattttaaaaaatgtcattttataggaaaaaaaacatcatttcattgtttataaaaatcatacta 4663320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 38 - 168
Target Start/End: Original strand, 52082045 - 52082175
Alignment:
Q  38 gaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgtt 137  Q
    |||||||| ||||||| ||| |||||||||||||||||||||| |||||||||||| | ||||| |||||| ||||||||| |||||| || ||||||||    
T  52082045 gaacttctacggtacacccgcaaattaaggtgtaccggtactcttacttcaaaaatttataaatgaactattatttttatgaaataaaaagttatttgtt 52082144  T
Q  138 gatatttatattttagaaaatgtcatttcat 168  Q
    ||||||||||||||||||||| |||||||||    
T  52082145 gatatttatattttagaaaatatcatttcat 52082175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 67 - 210
Target Start/End: Complemental strand, 45519003 - 45518868
Alignment:
Q  67 gtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttc 166  Q
    ||||||||||||||| ||||||||||| |||||||||||||| ||||| | | ||||||||| ||||| |||||||||||| ||||||||||||||||||    
T  45519003 gtgtaccggtactcccacttcaaaaatttttaaattaactattattttgaagaaataaagagatatttattgatatttatagtttagaaaatgtcatttc 45518904  T
Q  167 ataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    ||||        | |||||||||||||||||||||||| |||||    
T  45518903 ataa--------catcatttcattgtttataaaaatcaaactaa 45518868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 59 - 171
Target Start/End: Original strand, 43714025 - 43714137
Alignment:
Q  59 aaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaat 158  Q
    ||||||| ||||| ||||| ||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||  || ||||||||||||||||||||    
T  43714025 aaattaatgtgtatcggtattcctacttcaaaaatttttaaattaactattatttttatgaaataaagagctattcattaatatttatattttagaaaat 43714124  T
Q  159 gtcatttcataag 171  Q
    || |||| |||||    
T  43714125 gttattttataag 43714137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 90 - 210
Target Start/End: Complemental strand, 32718004 - 32717885
Alignment:
Q  90 aaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcat 189  Q
    |||||||||||| |||||| ||||||||| |||||| || ||||||||||||||||||||||||||||||||||| ||||||       | |||||||||    
T  32718004 aaatctttaaatgaactattatttttatgaaataaaaagttatttgttgatatttatattttagaaaatgtcattacataag-aaaaaacttcatttcat 32717906  T
Q  190 tgtttataaaaatcatactaa 210  Q
    |||||||||||||||||||||    
T  32717905 tgtttataaaaatcatactaa 32717885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 32 - 163
Target Start/End: Original strand, 54262540 - 54262671
Alignment:
Q  32 ttttgggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagcta 131  Q
    |||||||||||||| ||||||||| |||||||| ||||||||| ||||| | ||||  |||||| ||||||||| || | ||||||| |||||| || ||    
T  54262540 ttttgggaacttctacggtacatcagtaaattatggtgtaccgatactcttgcttcttaaatctataaattaacaatcaattttatgaaataaatagtta 54262639  T
Q  132 tttgttgatatttatattttagaaaatgtcat 163  Q
    |||||||  ||||| |||||||||||| ||||    
T  54262640 tttgttggcatttagattttagaaaatatcat 54262671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 58 - 206
Target Start/End: Complemental strand, 19608675 - 19608527
Alignment:
Q  58 taaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaa 157  Q
    ||||||||||||||||| ||| |||  |||| |||||  ||| ||||| || ||||||||| || |||||||||||||| ||  ||||||||||||||||    
T  19608675 taaattaaggtgtaccgatacacctgtttcataaatcaataagttaacgatcatttttatgtaaaaaagagctatttgtcgacttttatattttagaaaa 19608576  T
Q  158 tgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcata 206  Q
    | | ||||||||||         ||||||||||||||||||||||||||    
T  19608575 tattatttcataagaaaaaaatatcatttcattgtttataaaaatcata 19608527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 56 - 167
Target Start/End: Complemental strand, 19914420 - 19914309
Alignment:
Q  56 cgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaa 155  Q
    ||||||||||||||||||||||||| | ||||| |||||| ||||||||| || | ||||||| |||||| || ||||||| |  |||||||||||||||    
T  19914420 cgtaaattaaggtgtaccggtactcttgcttcataaatctataaattaacgatcaattttatgaaataaatagttatttgtcggcatttatattttagaa 19914321  T
Q  156 aatgtcatttca 167  Q
    ||| | ||||||    
T  19914320 aatatgatttca 19914309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 42 - 158
Target Start/End: Complemental strand, 8324788 - 8324672
Alignment:
Q  42 ttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgata 141  Q
    |||| ||||||| |||| |||||||||||||| |||| |||| |||| |||||| ||| ||||| ||||||||||||  |||||||| ||||| | ||      
T  8324788 ttctacggtacacccgtcaattaaggtgtaccagtacacctatttcataaatctataagttaacgataatttttatgtgataaagagatatttatcgaat 8324689  T
Q  142 tttatattttagaaaat 158  Q
    |||||||||||||||||    
T  8324688 tttatattttagaaaat 8324672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 158
Target Start/End: Complemental strand, 8433835 - 8433710
Alignment:
Q  33 tttgggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctat 132  Q
    |||| |||||||| ||||||||| |||||||  ||||||||||||||| | ||||  |||| | ||||||||| || | ||||||| |||||| || |||    
T  8433835 tttgagaacttctacggtacatctgtaaattgtggtgtaccggtactcttgcttcttaaatttataaattaacaattaattttatgaaataaatagttat 8433736  T
Q  133 ttgttgatatttatattttagaaaat 158  Q
    |||| |  ||||||||||||||||||    
T  8433735 ttgtcggcatttatattttagaaaat 8433710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 42 - 171
Target Start/End: Complemental strand, 41902349 - 41902220
Alignment:
Q  42 ttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgata 141  Q
    |||| |||||||||| |||||||||||||| |||||| |||  |||| ||||   |||  |||| || ||||||||| || |||||||||||||| ||      
T  41902349 ttctacggtacatccttaaattaaggtgtatcggtacacctgtttcataaattaataagctaacgatcatttttatgtaaaaaagagctatttgtcgact 41902250  T
Q  142 tttatattttagaaaatgtcatttcataag 171  Q
    ||||||||||||||||| | ||||||||||    
T  41902249 tttatattttagaaaatattatttcataag 41902220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 58 - 171
Target Start/End: Original strand, 52776472 - 52776584
Alignment:
Q  58 taaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaa 157  Q
    |||||| |||||||||||||||| || ||||||||| | ||| ||||| || ||||| ||| ||||||||  ||||| || |||||||||||||||||||    
T  52776472 taaattgaggtgtaccggtactcatatttcaaaaatttataatttaacgattatttt-atgaaataaagaattatttattaatatttatattttagaaaa 52776570  T
Q  158 tgtcatttcataag 171  Q
    | |||||| |||||    
T  52776571 tatcattttataag 52776584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 36 - 171
Target Start/End: Original strand, 1129129 - 1129265
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataattttt-atggaataaagagctattt 134  Q
    |||||||||| |||||||  |  ||| | |||||||||||||||||| ||||| || | | ||||||||| || |||||| ||| |||||| ||||||||    
T  1129129 gggaacttctacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttataaattaacgatcattttttatgtaataaatagctattt 1129228  T
Q  135 gttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||  |||||||||||||| ||||  ||||||||||||    
T  1129229 gtcaatatttatattttataaaacatcatttcataag 1129265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 36 - 171
Target Start/End: Complemental strand, 29806415 - 29806280
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttg 135  Q
    |||||||||| |||||||  || ||||| |||||||||||||||| | ||||  |||||| ||||||||| || | ||||||| |||||| |  ||||||    
T  29806415 gggaacttctacggtacactcgcaaattgaggtgtaccggtactcttgcttcctaaatctataaattaacaattaattttatgaaataaataattatttg 29806316  T
Q  136 ttgatatttatattttagaaaatgtcatttcataag 171  Q
         |||||||||||||||||| ||||||||||||    
T  29806315 ccagcatttatattttagaaaatatcatttcataag 29806280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 171
Target Start/End: Original strand, 52457945 - 52458083
Alignment:
Q  33 tttgggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctat 132  Q
    |||||||  |||| ||||| | || ||||||||||||||||||||| |||| |||| || ||  ||| ||||| || ||||||||| ||||||||| | |    
T  52457945 tttgggagtttctacggtatacccttaaattaaggtgtaccggtacacctatttcataattcaataagttaacaatcatttttatgtaataaagagatgt 52458044  T
Q  133 ttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    || | ||  ||||||||||| ||||| ||||||||||||    
T  52458045 ttatcgacttttatattttaaaaaatatcatttcataag 52458083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 66 - 171
Target Start/End: Complemental strand, 23796153 - 23796048
Alignment:
Q  66 ggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 165  Q
    ||||||||||||||| ||||||  |||||| ||||||||| || | ||||||| |||||| |  ||||||| |  |||||||||||||||||| |||| |    
T  23796153 ggtgtaccggtactcttacttcctaaatctataaattaacgatcaattttatgaaataaataattatttgtcggcatttatattttagaaaatatcatgt 23796054  T
Q  166 cataag 171  Q
    ||||||    
T  23796053 cataag 23796048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 36 - 152
Target Start/End: Complemental strand, 42479091 - 42478974
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataattttt-atggaataaagagctattt 134  Q
    |||||||||| |||||||| |  ||| |||||||||||||||||| |  |||| || | | ||||||||| ||||||||| ||| |||||| | ||||||    
T  42479091 gggaacttctacggtacattcacaaaataaggtgtaccggtactcttgtttcataattttataaattaacgataattttttatgtaataaataactattt 42478992  T
Q  135 gttgatatttatatttta 152  Q
    ||| ||||||||||||||    
T  42478991 gttaatatttatatttta 42478974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 152
Target Start/End: Complemental strand, 7862822 - 7862734
Alignment:
Q  65 aggtgtaccggtactcctacttcaaaaatctttaaattaactataa-tttttatggaataaagagctatttgttgatatttatatttta 152  Q
    |||||||||||||||||| ||||| || | | ||||||||| |||| |||||||| |||||| ||||||||||  ||||||||||||||    
T  7862822 aggtgtaccggtactcctgcttcataattttataaattaacgataattttttatgtaataaatagctatttgtcaatatttatatttta 7862734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 9252259 - 9252159
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttg 135  Q
    |||||||||| |||||||  |||||||| |||||||||||||||| | ||||| | |||| ||||||||| || | ||||||| |||||| || ||||||    
T  9252259 gggaacttctacggtacactcgtaaattgaggtgtaccggtactcttgcttcatatatctataaattaacgatcaattttatgaaataaatagttatttg 9252160  T
Q  136 t 136  Q
    |    
T  9252159 t 9252159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 170
Target Start/End: Original strand, 52178959 - 52179087
Alignment:
Q  42 ttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgata 141  Q
    |||| ||||||| || |||||||||||||||||||||   |  |||| |||||  ||| ||||| || ||||||||| || |||||||||||| | ||      
T  52178959 ttctacggtacacccttaaattaaggtgtaccggtacatttgtttcataaatcaataagttaacgatcatttttatgtaaaaaagagctatttatcgact 52179058  T
Q  142 tttatattttagaaaatgtcatttcataa 170  Q
    ||||||||||||||||| | |||||||||    
T  52179059 tttatattttagaaaatattatttcataa 52179087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 158
Target Start/End: Complemental strand, 54911148 - 54911032
Alignment:
Q  42 ttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgata 141  Q
    |||| ||||||| || | |||||||||||||| |||| |||| || | |||| | ||||||||| ||||||||||||  |||||||| ||||| | ||      
T  54911148 ttctacggtacacccttcaattaaggtgtaccagtacacctattttataaatttataaattaacgataatttttatgtgataaagagatatttatcgact 54911049  T
Q  142 tttatattttagaaaat 158  Q
    |||||||||||||||||    
T  54911048 tttatattttagaaaat 54911032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 36 - 171
Target Start/End: Complemental strand, 8966337 - 8966202
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttg 135  Q
    |||||||||| |||||||  | ||||||||||||||||||||||||| ||||  |||| | |  |||||| || | ||||||| |||||| || ||||||    
T  8966337 gggaacttctacggtacactcataaattaaggtgtaccggtactcctgcttcctaaatttatgcattaacaatcaattttatgaaataaaaagttatttg 8966238  T
Q  136 ttgatatttatattttagaaaatgtcatttcataag 171  Q
    | |  |||| ||| | ||||||| ||||||||||||    
T  8966237 tcggcatttgtatctcagaaaatatcatttcataag 8966202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 99 - 170
Target Start/End: Original strand, 37626999 - 37627070
Alignment:
Q  99 aattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataa 170  Q
    ||||||| || ||||||||  |||||||||||||||||| ||||||||||||||| |||  |||||||||||    
T  37626999 aattaacgatcatttttattaaataaagagctatttgttaatatttatattttaggaaacatcatttcataa 37627070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 36 - 167
Target Start/End: Original strand, 52024438 - 52024569
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttg 135  Q
    |||||||||| | |||||  |||||||| |||||||| ||||||| |  |||| |||||| |||| |||| || | ||||||| |||||| || ||||||    
T  52024438 gggaacttctactgtacactcgtaaattgaggtgtacaggtactcttgtttcataaatctataaactaacgatcaattttatgaaataaatagttatttg 52024537  T
Q  136 ttgatatttatattttagaaaatgtcatttca 167  Q
    | |  |||||||||||||||||| | ||||||    
T  52024538 tcggcatttatattttagaaaatatgatttca 52024569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 210
Target Start/End: Original strand, 38785082 - 38785256
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctt-taaattaactataatttttatggaataaagagctattt 134  Q
    |||||||||| ||||||| | | |||||| |||||||||||||||   |||  ||  | || |||||||||||||||||||||| |  ||| || | |||    
T  38785082 gggaacttctacggtacacctgcaaattacggtgtaccggtactctcgcttacaattttttataaattaactataatttttatgaagaaaataggtgttt 38785181  T
Q  135 gttgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    ||||| || ||||||||||||||| |||||| |||||         |||||||||| |||||||||||||||||||    
T  38785182 gttgacatatatattttagaaaatatcattttataagaaaaaat-atcatttcattttttataaaaatcatactaa 38785256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 171
Target Start/End: Original strand, 39252912 - 39253026
Alignment:
Q  58 taaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataattttt-atggaataaagagctatttgttgatatttatattttagaaa 156  Q
    |||| |||||||||||||||||  || |||| || | | ||||||||| || |||||| ||| |||||| ||||||||||  |||||||||||||| |||    
T  39252912 taaagtaaggtgtaccggtacttttatttcataattttataaattaacaattattttttatgtaataaatagctatttgtcaatatttatattttataaa 39253011  T
Q  157 atgtcatttcataag 171  Q
    |  ||||||||||||    
T  39253012 acatcatttcataag 39253026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 198
Target Start/End: Original strand, 26456982 - 26457116
Alignment:
Q  65 aggtgtaccggtactcctacttcaaaaatctttaaattaactataattttt-atggaataaagagctatttgttgatatttatattttagaaaatgtcat 163  Q
    ||||| |||||||||||| ||||| || | | ||||||||| || |||||| ||| |||||| ||||||||||  |||||||||||||| | ||  ||||    
T  26456982 aggtgaaccggtactcctgcttcataattttataaattaacgatcattttttatgtaataaatagctatttgtcaatatttatattttatagaacatcat 26457081  T
Q  164 ttcataagnnnnnnncgtcatttcattgtttataa 198  Q
    ||||||||       | ||||||||||||||||||    
T  26457082 ttcataagaaaaaaacatcatttcattgtttataa 26457116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 49 - 158
Target Start/End: Original strand, 41574749 - 41574858
Alignment:
Q  49 gtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatat 148  Q
    ||||| || ||||||||| |||||| |||| |||| |||| |||||  ||| ||||  || ||||||||| ||||||||| ||||| ||||  |||||||    
T  41574749 gtacacccttaaattaagatgtaccagtacacctaattcataaatcaataagttaatgattatttttatgtaataaagagatatttattgacttttatat 41574848  T
Q  149 tttagaaaat 158  Q
    ||||||||||    
T  41574849 tttagaaaat 41574858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 170
Target Start/End: Original strand, 35375510 - 35375646
Alignment:
Q  35 tgggaacttcttcggtacatc-cgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatt 133  Q
    ||||||||||| ||||||| | |  ||||| ||||||| |||||||| |  |||| |||| | ||||||||| || |||| |||  ||||||||||||||    
T  35375510 tgggaacttctacggtacacctcacaaattgaggtgtatcggtactcttgattcataaatttataaattaacaatcatttatattaaataaagagctatt 35375609  T
Q  134 tgttgatatttatattttagaaaatgtcatttcataa 170  Q
    |||  ||||||| ||||||| |||| |||| ||||||    
T  35375610 tgtcaatatttaaattttaggaaatatcatgtcataa 35375646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 157
Target Start/End: Complemental strand, 40284311 - 40284196
Alignment:
Q  42 ttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgata 141  Q
    |||| ||||||| || ||||||||||||||||| ||| | || |||| ||||   ||| ||||| || ||||||||| ||||||||  ||||||| ||      
T  40284311 ttctacggtacacccttaaattaaggtgtaccgatacacttatttcataaataaataagttaacgattatttttatgtaataaagaaatatttgtcgact 40284212  T
Q  142 tttatattttagaaaa 157  Q
    ||||||||||||||||    
T  40284211 tttatattttagaaaa 40284196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 97 - 171
Target Start/End: Complemental strand, 882069 - 881995
Alignment:
Q  97 taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||||| || ||||||||  |||||| || |||||||  ||||||||||||||||||| ||||| |||||||    
T  882069 taaattaacgatcatttttataaaataaaaagttatttgtcaatatttatattttagaaaacgtcatatcataag 881995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 170
Target Start/End: Complemental strand, 5529100 - 5528966
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttg 135  Q
    |||| ||||| |||||||  | |||| | |||||||||||||||| | | ||  |||||| ||||||||  || | ||||||| |||| | || ||||||    
T  5529100 gggagcttctacggtacactcttaaaatgaggtgtaccggtactcttccatcccaaatctataaattaatgatcaattttatgaaatagatagttatttg 5529001  T
Q  136 ttgatatttatattttagaaaatgtcatttcataa 170  Q
    | | ||||||||||||| ||||| |||||||||||    
T  5529000 tcgctatttatattttataaaatatcatttcataa 5528966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 97 - 171
Target Start/End: Complemental strand, 7347435 - 7347361
Alignment:
Q  97 taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||||| || ||||| ||| |||||| || |||||||  |||||||||||||||||||  ||||||||||||    
T  7347435 taaattaacgatcattttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataag 7347361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 11140653 - 11140607
Alignment:
Q  34 ttgggaacttcttcggtacatccgtaaattaaggtgtaccggtactc 80  Q
    |||||||||||| ||||||| ||| ||||||||||||||||||||||    
T  11140653 ttgggaacttctacggtacacccgcaaattaaggtgtaccggtactc 11140607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 210
Target Start/End: Complemental strand, 32621723 - 32621572
Alignment:
Q  58 taaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaa 157  Q
    ||||||||||||||  ||||| |||| |||| |||||  |||  |||  || ||||||||| || |||||||||||||| ||  ||||||||||| ||||    
T  32621723 taaattaaggtgtattggtacacctatttcataaatcaataagataaagatcatttttatgaaacaaagagctatttgtcgacttttatattttaaaaaa 32621624  T
Q  158 tgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    | | ||||||||||       | | |||||||||||||||| |||||||||||    
T  32621623 tattatttcataag-aaaaaacataatttcattgtttataagaatcatactaa 32621572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 37492304 - 37492258
Alignment:
Q  34 ttgggaacttcttcggtacatccgtaaattaaggtgtaccggtactc 80  Q
    |||||||||||| ||||||||||| |||||| |||||||||||||||    
T  37492304 ttgggaacttctacggtacatccgcaaattacggtgtaccggtactc 37492258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 37 - 79
Target Start/End: Original strand, 44670260 - 44670302
Alignment:
Q  37 ggaacttcttcggtacatccgtaaattaaggtgtaccggtact 79  Q
    ||||||||| |||||||||||||||||||||||| ||||||||    
T  44670260 ggaacttctacggtacatccgtaaattaaggtgtgccggtact 44670302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 171
Target Start/End: Original strand, 26409661 - 26409765
Alignment:
Q  67 gtgtaccggtactcctacttca-aaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 165  Q
    |||||||||||||| |  |||| ||||| | ||||||||| || ||||||||| |||||| || |||||||  ||||||||||||| ||||| ||||| |    
T  26409661 gtgtaccggtactcttgtttcacaaaatttataaattaacgatcatttttatgaaataaaaagttatttgtcaatatttatatttt-gaaaacgtcatat 26409759  T
Q  166 cataag 171  Q
    ||||||    
T  26409760 cataag 26409765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 171
Target Start/End: Original strand, 35352221 - 35352326
Alignment:
Q  67 gtgtaccggtactcctacttca-aaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 165  Q
    |||||||||||||| |  |||| ||||| | ||||||||  || | ||| ||| |||||| || |||||||  ||||||||||||||||||| |||||||    
T  35352221 gtgtaccggtactcttgtttcacaaaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacgtcattt 35352320  T
Q  166 cataag 171  Q
    ||||||    
T  35352321 cataag 35352326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 171
Target Start/End: Original strand, 44379413 - 44379550
Alignment:
Q  35 tgggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataattttt-atggaataaagagctatt 133  Q
    ||||||||||| |||||||  |  ||| | |||||||||||||||||| ||||| || | | ||||||||| |  |||||| ||| |||||| | |||||    
T  44379413 tgggaacttctacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttataaattaacgaccattttttatgtaataaataactatt 44379512  T
Q  134 tgttgatatttatattttagaaaatgtcatttcataag 171  Q
    |||  |||||||||||||| | ||  ||||||||||||    
T  44379513 tgtcaatatttatattttatagaacatcatttcataag 44379550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 171
Target Start/End: Original strand, 49950955 - 49951060
Alignment:
Q  67 gtgtaccggtactcctacttca-aaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 165  Q
    |||||||||||||| || |||| ||||| | ||||||||  || | ||| ||| |||||| || |||||||  |||||||||||||||||||  ||||||    
T  49950955 gtgtaccggtactcttatttcacaaaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcattt 49951054  T
Q  166 cataag 171  Q
    ||||||    
T  49951055 cataag 49951060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 206
Target Start/End: Original strand, 4817105 - 4817246
Alignment:
Q  65 aggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatt 164  Q
    |||||||||||||||| ||||| | || | | ||||||||| || ||||||||| |||||| || ||||| |  |||||||||||||| | ||  ||| |    
T  4817105 aggtgtaccggtactcttactttataattttataaattaacgatcatttttatgtaataaatagttatttatcaatatttatattttatagaacatcaat 4817204  T
Q  165 tcataagnnnnnnncgtcatttcattgtttataaaaatcata 206  Q
    |||||||       | |||||||||||||||||  |||||||    
T  4817205 tcataagaaaaaaacatcatttcattgtttatacgaatcata 4817246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 152
Target Start/End: Complemental strand, 23456835 - 23456747
Alignment:
Q  65 aggtgtaccggtactcctacttcaaaaatctttaaattaactataa-tttttatggaataaagagctatttgttgatatttatatttta 152  Q
    |||||||||||||||||| ||||| || | | ||||||||| |||| |||||||| |||||| |||| |||||  ||| ||||||||||    
T  23456835 aggtgtaccggtactccttcttcataattttataaattaacgataattttttatgtaataaatagctctttgtcaatagttatatttta 23456747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 39629947 - 39629991
Alignment:
Q  35 tgggaacttcttcggtacatccgtaaattaaggtgtaccggtact 79  Q
    ||||||||||| ||||||||||| |||||||| ||||||||||||    
T  39629947 tgggaacttctacggtacatccgcaaattaagatgtaccggtact 39629991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 80
Target Start/End: Complemental strand, 44366015 - 44365971
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactc 80  Q
    ||||||||||  |||||| ||||||||||||||||||||||||||    
T  44366015 gggaacttctatggtacacccgtaaattaaggtgtaccggtactc 44365971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 152
Target Start/End: Complemental strand, 47746206 - 47746118
Alignment:
Q  65 aggtgtaccggtactcctacttcaaaaatctttaaattaactataattttt-atggaataaagagctatttgttgatatttatatttta 152  Q
    |||||||||| ||||| | ||||| || | | ||||||||| ||||||||| ||| |||||| ||||||||||  ||||||||||||||    
T  47746206 aggtgtaccgatactcttgcttcataattttataaattaacgataattttttatgtaataaatagctatttgtcaatatttatatttta 47746118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 158
Target Start/End: Complemental strand, 53444942 - 53444826
Alignment:
Q  42 ttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgata 141  Q
    |||| |||||||||| ||||||||||||||||||||| |||  ||    |||   ||| ||||| || |||| |||| || |||||||||||||| ||      
T  53444942 ttctacggtacatccttaaattaaggtgtaccggtacacctgttttgtgaattaataatttaacgatcatttatatgtaacaaagagctatttgtcgact 53444843  T
Q  142 tttatattttagaaaat 158  Q
    |||||||||||||||||    
T  53444842 tttatattttagaaaat 53444826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 171
Target Start/End: Original strand, 7157123 - 7157174
Alignment:
Q  120 aataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    |||||| || |||||||  |||||||||||||||||||| ||||||||||||    
T  7157123 aataaaaaggtatttgtcaatatttatattttagaaaatatcatttcataag 7157174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 157
Target Start/End: Original strand, 11510740 - 11510837
Alignment:
Q  58 taaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaa 157  Q
    |||||| ||||| ||||||||||||||||||||||| ||  ||||||| || | ||||||| ||||||  | ||||| |  |||||||||||||||||||    
T  11510740 taaattgaggtgcaccggtactcctacttcaaaaat-ttataattaacgatta-ttttatgaaataaaatgttatttatcaatatttatattttagaaaa 11510837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 80
Target Start/End: Complemental strand, 42067984 - 42067941
Alignment:
Q  37 ggaacttcttcggtacatccgtaaattaaggtgtaccggtactc 80  Q
    ||||||||| ||||||| ||| ||||||||||||||||||||||    
T  42067984 ggaacttctacggtacacccgcaaattaaggtgtaccggtactc 42067941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 168
Target Start/End: Original strand, 46868548 - 46868619
Alignment:
Q  97 taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcat 168  Q
    ||||||||  || ||||||||| ||||||||||||||||| ||  ||| |||| || |||||||||||||||    
T  46868548 taaattaatgattatttttatgaaataaagagctatttgtcgaattttgtattgtaaaaaatgtcatttcat 46868619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 206
Target Start/End: Original strand, 48388821 - 48388929
Alignment:
Q  97 taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttat 196  Q
    ||||||||| || | ||| ||| |||||| |  |||||||| |||||||||||||||||||  ||||||||||||       | ||||||||||||||||    
T  48388821 taaattaacgatcactttaatgaaataaaaaagtatttgtttatatttatattttagaaaacatcatttcataag-aaaaatcatcatttcattgtttat 48388919  T
Q  197 aaaaatcata 206  Q
    ||| ||||||    
T  48388920 aaagatcata 48388929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 171
Target Start/End: Complemental strand, 53186326 - 53186275
Alignment:
Q  120 aataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    |||||| || |||||||| |||||||||||||||||||  ||||||||||||    
T  53186326 aataaaaaggtatttgttaatatttatattttagaaaacatcatttcataag 53186275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 171
Target Start/End: Complemental strand, 55418109 - 55418050
Alignment:
Q  112 ttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    |||||||||||||| ||||||||||  || ||||||||||| ||||  ||||||||||||    
T  55418109 ttttatggaataaaaagctatttgtcaatgtttatattttaaaaaacatcatttcataag 55418050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 29786531 - 29786577
Alignment:
Q  34 ttgggaacttcttcggtacatccgtaaattaaggtgtaccggtactc 80  Q
    |||||||||||| ||||||| | | ||||||||||||||||||||||    
T  29786531 ttgggaacttctacggtacacctgcaaattaaggtgtaccggtactc 29786577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 171
Target Start/End: Original strand, 35320422 - 35320496
Alignment:
Q  97 taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||||| || | ||| ||| |||||| || |||||||  |||||||||||||||||||  ||||||||||||    
T  35320422 taaattaacaatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataag 35320496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 158
Target Start/End: Original strand, 35748922 - 35749044
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttg 135  Q
    |||||||||| || ||||  |||||||  ||||||| |||||||| | ||||| |||||| ||||||||  || | ||||||  |||||| || ||||||    
T  35748922 gggaacttctacgatacactcgtaaatagaggtgtatcggtactcttgcttcataaatctataaattaatgatcaattttatcaaataaatagttatttg 35749021  T
Q  136 ttgatatttatattttagaaaat 158  Q
    | |  |||||||||||| |||||    
T  35749022 tcggcatttatattttaaaaaat 35749044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 171
Target Start/End: Complemental strand, 45927565 - 45927491
Alignment:
Q  97 taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||||| || | ||| ||| |||||| || |||||||  |||||||||||||| ||||| ||||||||||||    
T  45927565 taaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttaaaaaatatcatttcataag 45927491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 171
Target Start/End: Complemental strand, 50465817 - 50465743
Alignment:
Q  97 taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||||| || | ||| ||| |||||| || |||||||  |||||||||||||||||||  ||||||||||||    
T  50465817 taaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataag 50465743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 171
Target Start/End: Complemental strand, 54009251 - 54009177
Alignment:
Q  97 taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||||| || | ||| ||| |||||| || |||||||  |||||||||||||||||||| | ||||||||||    
T  54009251 taaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaatattatttcataag 54009177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 171
Target Start/End: Original strand, 55365436 - 55365510
Alignment:
Q  97 taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||||| || | ||| ||| |||||| |  |||||||| |||||||||||||||||||  ||||||||||||    
T  55365436 taaattaacgatcactttaatgaaataaaaaagtatttgttaatatttatattttagaaaacatcatttcataag 55365510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 3082327 - 3082356
Alignment:
Q  181 tcatttcattgtttataaaaatcatactaa 210  Q
    ||||||||||||||||||||||||||||||    
T  3082327 tcatttcattgtttataaaaatcatactaa 3082356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 70 - 171
Target Start/End: Original strand, 27102629 - 27102729
Alignment:
Q  70 taccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcata 169  Q
    ||||||||||||||||| |||||| | ||| ||||  || ||||| ||| |||||| || ||||| || |||||||||||||| ||||  |||||| |||    
T  27102629 taccggtactcctactttaaaaatttataatttaatgatcatttt-atgtaataaatagttatttattaatatttatattttataaaacatcattttata 27102727  T
Q  170 ag 171  Q
    ||    
T  27102728 ag 27102729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 97 - 170
Target Start/End: Complemental strand, 32720331 - 32720258
Alignment:
Q  97 taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataa 170  Q
    ||||||||| || | ||| ||| |||||| || |||||||  |||||||||||||||||||  |||||||||||    
T  32720331 taaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataa 32720258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 112 - 157
Target Start/End: Complemental strand, 34593982 - 34593937
Alignment:
Q  112 ttttatggaataaagagctatttgttgatatttatattttagaaaa 157  Q
    ||||||| ||||||||| || ||||||| |||||||||||||||||    
T  34593982 ttttatgaaataaagagttacttgttgacatttatattttagaaaa 34593937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 111 - 152
Target Start/End: Complemental strand, 39678437 - 39678396
Alignment:
Q  111 tttttatggaataaagagctatttgttgatatttatatttta 152  Q
    |||||||| |||||| ||||||||||| ||||||||||||||    
T  39678437 tttttatgaaataaatagctatttgttaatatttatatttta 39678396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 152
Target Start/End: Complemental strand, 40478164 - 40478048
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactat-aatttttatggaataaagagctattt 134  Q
    |||||||||| |||||||  |  ||| | |||||||||||||||||| ||||| || | | ||||||||| || | |||||||| |||||| ||||||||    
T  40478164 gggaacttctacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttataaattaacgatcattttttatgtaataaatagctattt 40478065  T
Q  135 gttgatatttatatttta 152  Q
     |  ||||||||||||||    
T  40478064 -tcaatatttatatttta 40478048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 99 - 168
Target Start/End: Original strand, 41316623 - 41316692
Alignment:
Q  99 aattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcat 168  Q
    ||||||| |||||||||||| ||||||||| ||||  | ||   |||||||||||||||| |||||||||    
T  41316623 aattaacgataatttttatgaaataaagagttattcatcgactattatattttagaaaatatcatttcat 41316692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 112 - 157
Target Start/End: Complemental strand, 46936996 - 46936951
Alignment:
Q  112 ttttatggaataaagagctatttgttgatatttatattttagaaaa 157  Q
    ||||||| |||||| ||||||| ||| |||||||||||||||||||    
T  46936996 ttttatgaaataaaaagctattagttaatatttatattttagaaaa 46936951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 110 - 171
Target Start/End: Complemental strand, 48990626 - 48990565
Alignment:
Q  110 atttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||| ||| |||||| || |||||||  |||||||||||||||||||  ||||||||||||    
T  48990626 attttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataag 48990565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 50560456 - 50560497
Alignment:
Q  130 tatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    |||||||| |||||||||||||||||||  ||||||||||||    
T  50560456 tatttgttaatatttatattttagaaaacatcatttcataag 50560497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 67 - 171
Target Start/End: Complemental strand, 51235897 - 51235792
Alignment:
Q  67 gtgtaccggtactcctacttca-aaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 165  Q
    |||||||||||||| |  |||| ||||| | ||||||||  || | ||| ||| |||||| || |||||||  |||||||||||||||||||  ||||||    
T  51235897 gtgtaccggtactcttgtttcacaaaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcattt 51235798  T
Q  166 cataag 171  Q
    ||||||    
T  51235797 cataag 51235792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 52082167 - 52082196
Alignment:
Q  181 tcatttcattgtttataaaaatcatactaa 210  Q
    ||||||||||||||||||||||||||||||    
T  52082167 tcatttcattgtttataaaaatcatactaa 52082196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 67 - 171
Target Start/End: Original strand, 52782190 - 52782295
Alignment:
Q  67 gtgtaccggtactcctacttca-aaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 165  Q
    |||||||||||||| |  |||| ||||| | ||||||||  || | ||| ||| |||||| || |||||||  |||||||||||||||||||  ||||||    
T  52782190 gtgtaccggtactcttgtttcacaaaatatataaattaaagattactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcattt 52782289  T
Q  166 cataag 171  Q
    ||||||    
T  52782290 cataag 52782295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 171
Target Start/End: Complemental strand, 54831207 - 54831094
Alignment:
Q  58 taaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaa 157  Q
    |||||||| |||||||||||| |||| |||| |||||  ||| ||| | || |||||| || ||||||||| ||||| |  |  ||||||||||||||||    
T  54831207 taaattaaagtgtaccggtacacctatttcataaatcaataagttatcgatcatttttctgtaataaagagatatttatcaacttttatattttagaaaa 54831108  T
Q  158 tgtcatttcataag 171  Q
    | | |||| |||||    
T  54831107 tattattttataag 54831094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 152
Target Start/End: Complemental strand, 35501167 - 35501079
Alignment:
Q  65 aggtgtaccggtactcctacttcaaaaatctttaaattaactataattttt-atggaataaagagctatttgttgatatttatatttta 152  Q
    |||||||||||||||||| ||||  || ||| ||||| ||| || |||||| ||| | |||| ||||||||||  ||||||||||||||    
T  35501167 aggtgtaccggtactcctgcttcttaattctataaataaacgatcattttttatgtagtaaatagctatttgtcaatatttatatttta 35501079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 171
Target Start/End: Original strand, 42621844 - 42621984
Alignment:
Q  32 ttttgggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataattttt-atggaataaagagct 130  Q
    |||||||||||||| |||||||  |  ||| | ||||||||| |||||| | ||||| || | | ||||||||| |  |||||| ||| |||||| || |    
T  42621844 ttttgggaacttctacggtacactcacaaaatgaggtgtaccagtactcttgcttcataattttataaattaacgaccattttttatgtaataaatagtt 42621943  T
Q  131 atttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||  |||||||||||||| | ||  ||||||||||||    
T  42621944 atttgtcaatatttatattttatagaacatcatttcataag 42621984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0604 (Bit Score: 117; Significance: 9e-60; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 37 - 210
Target Start/End: Complemental strand, 2425 - 2252
Alignment:
Q  37 ggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgt 136  Q
    |||| |||| || |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  2425 ggaatttctacgatacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactattatttttacggaataaagagctatttgt 2326  T
Q  137 tgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    |||||| ||||||||||||||||||||||||||||       |||||||| |||||||||||||||||||||||    
T  2325 tgatatatatattttagaaaatgtcatttcataagaaaaaaacgtcatttgattgtttataaaaatcatactaa 2252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 117; Significance: 9e-60; HSPs: 68)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 36 - 210
Target Start/End: Complemental strand, 43750481 - 43750308
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttg 135  Q
    |||||||||| ||| ||| | | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||     
T  43750481 gggaacttctacgggacacctgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactattatttttatggaataaagagctattta 43750382  T
Q  136 ttgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    ||||||||||||||||||||||||||||||||||||       |||||||||||||| |||||||||||||||||    
T  43750381 ttgatatttatattttagaaaatgtcatttcataag-aaaaaacgtcatttcattgtctataaaaatcatactaa 43750308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 42 - 202
Target Start/End: Original strand, 20438822 - 20438982
Alignment:
Q  42 ttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgata 141  Q
    |||| ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  20438822 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactattatttttatggaataaagagctatttgttgata 20438921  T
Q  142 tttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaat 202  Q
    ||||||||||| |||||||||||| |||||       ||||||||||||||||||||||||    
T  20438922 tttatattttaaaaaatgtcattttataagaaaaaaacgtcatttcattgtttataaaaat 20438982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 36 - 210
Target Start/End: Original strand, 30936094 - 30936268
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttg 135  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||| |||||||||||| | |||||||||||| | ||||||| |||||| |||||||||    
T  30936094 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcttacttcaaaaatttataaattaactatcaattttatgaaataaaaagctatttg 30936193  T
Q  136 ttgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    ||||||||||||||||||||||| ||||||||||||       | |||||||||||||||||||||| |||||||    
T  30936194 ttgatatttatattttagaaaatatcatttcataagaaaaaatcatcatttcattgtttataaaaatgatactaa 30936268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 36 - 210
Target Start/End: Complemental strand, 34118876 - 34118703
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttg 135  Q
    |||||||||| ||||||| ||| |||||||||||||| ||||||| || ||||||||  |||||||||||||| ||||||||||||||||| ||||||||    
T  34118876 gggaacttctacggtacacccgcaaattaaggtgtactggtactcttatttcaaaaaaatttaaattaactattatttttatggaataaagtgctatttg 34118777  T
Q  136 ttgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    ||||||||||||||||||||||||||||||||||||         |||||| |||||||||||||||||||||||    
T  34118776 ttgatatttatattttagaaaatgtcatttcataagaaaaaat-atcattttattgtttataaaaatcatactaa 34118703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 36 - 210
Target Start/End: Complemental strand, 18990494 - 18990321
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttg 135  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||  | |||||| |||||||||||||||||    
T  18990494 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctactttaaaaatctttaaattaactagtacttttatagaataaagagctatttg 18990395  T
Q  136 ttgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    |||||||||||||||||| |||||||||||| ||||       | | ||||||||||||||||| ||||||||||    
T  18990394 ttgatatttatattttaggaaatgtcatttcttaag-aaaaaacattatttcattgtttataaacatcatactaa 18990321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 36 - 210
Target Start/End: Complemental strand, 42975301 - 42975127
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttg 135  Q
    ||||||||||   |||||||||||||||||||||||||| || |  |||||||||||| | |||||||||||| ||||||||| |||||| | |||||||    
T  42975301 gggaacttctattgtacatccgtaaattaaggtgtaccgatatttttacttcaaaaatttataaattaactattatttttatgaaataaaaaactatttg 42975202  T
Q  136 ttgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    ||||||||||||||||||||||| ||||||||||||       | ||||||||||||||||||||||||||||||    
T  42975201 ttgatatttatattttagaaaatatcatttcataagaaaaaaacatcatttcattgtttataaaaatcatactaa 42975127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 36 - 210
Target Start/End: Original strand, 45857475 - 45857648
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttg 135  Q
    |||||||| | ||||||| ||| |||||||||||||||||||||| |||||||||||| | |||||||||||| | ||||||| |||||| |||||||||    
T  45857475 gggaacttttacggtacacccgcaaattaaggtgtaccggtactcttacttcaaaaatttataaattaactattacttttatgaaataaaaagctatttg 45857574  T
Q  136 ttgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    ||||||||||||||||||||||| |||||| |||||       | ||||||||||||||||||||||||||||||    
T  45857575 ttgatatttatattttagaaaatatcatttaataag-aaaaaacatcatttcattgtttataaaaatcatactaa 45857648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 58 - 210
Target Start/End: Complemental strand, 11486379 - 11486228
Alignment:
Q  58 taaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaa 157  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||  |||||||| ||||||||||||||| ||||||||| ||||||||||||    
T  11486379 taaattaaggtgtaccggtactcttacttcaaaaatctataaattaactatcttttttatgaaataaagagctatttattgatatttgtattttagaaaa 11486280  T
Q  158 tgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    | ||||||||||||       | | |||||||||||||||||| |||||||||    
T  11486279 tatcatttcataag-aaaaaacataatttcattgtttataaaagtcatactaa 11486228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 47 - 206
Target Start/End: Original strand, 8770381 - 8770539
Alignment:
Q  47 cggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttat 146  Q
    ||||||| ||| |||||||||||||||| ||||| | |||||||||||| |||||||||||| ||||||||| ||||||||| | ||||||||||||| |    
T  8770381 cggtacacccgcaaattaaggtgtaccgatactcttgcttcaaaaatctataaattaactatcatttttatgaaataaagagttgtttgttgatatttgt 8770480  T
Q  147 attttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcata 206  Q
    |||||||||||| ||||| ||||||       | ||||||||||||||||||||||||||    
T  8770481 attttagaaaatatcattacataag-aaaaaacatcatttcattgtttataaaaatcata 8770539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 36 - 165
Target Start/End: Complemental strand, 30317595 - 30317465
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatc-tttaaattaactataatttttatggaataaagagctattt 134  Q
    ||||| |||| ||||||| | | ||||||||||||| |||||||||||||| |||||   ||||||||||| || |||||||||||||||||||||||||    
T  30317595 gggaatttctacggtacacctgcaaattaaggtgtatcggtactcctactttaaaaaaaatttaaattaacaattatttttatggaataaagagctattt 30317496  T
Q  135 gttgatatttatattttagaaaatgtcattt 165  Q
    |||||||||||||||||||||||||| ||||    
T  30317495 gttgatatttatattttagaaaatgttattt 30317465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 34 - 170
Target Start/End: Original strand, 44963821 - 44963957
Alignment:
Q  34 ttgggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatt 133  Q
    ||||||||||||  |||||| ||  || ||||||||||||||||||| |||||||||||| | |||||||||||| ||||||||| |||||| || ||||    
T  44963821 ttgggaacttctatggtacacccacaatttaaggtgtaccggtactcttacttcaaaaatttataaattaactatcatttttatgaaataaaaagttatt 44963920  T
Q  134 tgttgatatttatattttagaaaatgtcatttcataa 170  Q
    ||||||||||| ||||||||||||| |||||| ||||    
T  44963921 tgttgatatttgtattttagaaaatatcattttataa 44963957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 37 - 171
Target Start/End: Original strand, 46836584 - 46836718
Alignment:
Q  37 ggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgt 136  Q
    ||||||||| || |||| | | |||||||| |||| || |||| ||||||||||||  |||||||||||||| |||||||| |||||||| ||||||| |    
T  46836584 ggaacttctacgatacacctgcaaattaagatgtatcgatacttctacttcaaaaaattttaaattaactattatttttatagaataaagtgctatttat 46836683  T
Q  137 tgatatttatattttagaaaatgtcatttcataag 171  Q
    |||||||||||||||| ||||||||||||||||||    
T  46836684 tgatatttatattttaaaaaatgtcatttcataag 46836718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 39 - 150
Target Start/End: Complemental strand, 48946472 - 48946361
Alignment:
Q  39 aacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttg 138  Q
    ||||||| ||||||| ||  |||||||| |||| |||||| ||||||| ||||||||||||||||| ||| ||||||||| ||||||||||||||| |||    
T  48946472 aacttctacggtacaccctcaaattaagatgtatcggtacccctactttaaaaatctttaaattaattattatttttatgaaataaagagctattttttg 48946373  T
Q  139 atatttatattt 150  Q
    ||||||||||||    
T  48946372 atatttatattt 48946361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 64 - 170
Target Start/End: Complemental strand, 41809577 - 41809471
Alignment:
Q  64 aaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcat 163  Q
    |||||||| | |||||  |||||||||||||| |||||||||||| | ||||||| ||||||||  ||||||||||||||||||||||||||||| ||||    
T  41809577 aaggtgtatcagtactgatacttcaaaaatctataaattaactatcaattttatgaaataaagaattatttgttgatatttatattttagaaaatatcat 41809478  T
Q  164 ttcataa 170  Q
    |||||||    
T  41809477 ttcataa 41809471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 59 - 171
Target Start/End: Complemental strand, 31482755 - 31482643
Alignment:
Q  59 aaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaat 158  Q
    ||||||||||||| ||| |||  || || |||||||| |||||||||||| ||||||||| |||||||||||||||  |||||||| |||||||||||||    
T  31482755 aaattaaggtgtatcggcacttttattttaaaaatctataaattaactattatttttatgaaataaagagctatttcatgatatttgtattttagaaaat 31482656  T
Q  159 gtcatttcataag 171  Q
     ||||||||||||    
T  31482655 atcatttcataag 31482643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 42 - 210
Target Start/End: Original strand, 37118340 - 37118507
Alignment:
Q  42 ttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgata 141  Q
    |||| |||||||||| ||||||||||||||||| ||| |||| |||| |||||  ||||||||| || ||||||||| ||||||||  ||||| | ||      
T  37118340 ttctacggtacatccataaattaaggtgtaccgatacacctatttcataaatcaataaattaacgatcatttttatgtaataaagaaatatttatcgact 37118439  T
Q  142 tttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    ||||||||||||||||| | ||||||||||       | |||||||||| ||||||| |||||||||||    
T  37118440 tttatattttagaaaatattatttcataag-aaaaaacatcatttcattctttataagaatcatactaa 37118507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 42 - 171
Target Start/End: Complemental strand, 24203267 - 24203138
Alignment:
Q  42 ttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgata 141  Q
    |||| ||||||| || ||||||||| ||||| ||||| |||| |||| |||||  ||||||||  || ||||||||| ||||||||| ||||||||||      
T  24203267 ttctacggtacacccttaaattaagatgtactggtacacctatttcataaatcaataaattaatgattatttttatgtaataaagagatatttgttgact 24203168  T
Q  142 tttatattttagaaaatgtcatttcataag 171  Q
    ||||||||||||||||| | ||||||||||    
T  24203167 tttatattttagaaaatattatttcataag 24203138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 36 - 134
Target Start/End: Complemental strand, 43069514 - 43069416
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctattt 134  Q
    |||||||||| ||||||| | |||| ||||| |||| |||||||| |||||||||||||| | |||||||||| ||||||||| ||| |||||||||||    
T  43069514 gggaacttctacggtacacctgtaagttaagatgtatcggtactcttacttcaaaaatctattaattaactatcatttttatgaaattaagagctattt 43069416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 47 - 171
Target Start/End: Complemental strand, 15877469 - 15877345
Alignment:
Q  47 cggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttat 146  Q
    ||||||| || ||||||||||||||||||||| |||  |||| ||||   ||| ||||| || ||||||||| || |||||||||||||||||  |||||    
T  15877469 cggtacacccttaaattaaggtgtaccggtacacctgtttcataaattaataagttaacgatcatttttatgtaaaaaagagctatttgttgacttttat 15877370  T
Q  147 attttagaaaatgtcatttcataag 171  Q
    |||||| ||||| | ||||||||||    
T  15877369 attttataaaatattatttcataag 15877345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 36 - 167
Target Start/End: Original strand, 43631055 - 43631186
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttg 135  Q
    ||||||||||  ||||||  |||| ||| |||||||||||||||| | ||||| |||||| |||| |||| || | ||||||| |||||| || ||||||    
T  43631055 gggaacttctatggtacactcgtagattgaggtgtaccggtactcttgcttcataaatctataaactaacgatcaattttatgaaataaatagttatttg 43631154  T
Q  136 ttgatatttatattttagaaaatgtcatttca 167  Q
    | || |||||||||||||||||| | ||||||    
T  43631155 tcgacatttatattttagaaaatatgatttca 43631186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 42 - 171
Target Start/End: Original strand, 39925801 - 39925930
Alignment:
Q  42 ttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgata 141  Q
    |||| |||||||||| ||||||||||||||||||||| |||| |||| || ||  ||| ||||| || ||||||||| ||||||||| | | | | ||      
T  39925801 ttctacggtacatccttaaattaaggtgtaccggtacacctatttcataattcaataagttaacaatcatttttatgtaataaagagatgtctatcgact 39925900  T
Q  142 tttatattttagaaaatgtcatttcataag 171  Q
    ||||||||||| ||||| ||||||||||||    
T  39925901 tttatattttaaaaaatatcatttcataag 39925930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 120 - 206
Target Start/End: Complemental strand, 43069399 - 43069314
Alignment:
Q  120 aataaagagctatttgttgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcata 206  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||       | ||||||||||| ||||||||||||||    
T  43069399 aataaagagctatttgttgatatttgtattttagaaaatatcatttcataag-aaaaaacatcatttcattggttataaaaatcata 43069314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 58 - 157
Target Start/End: Complemental strand, 13806744 - 13806646
Alignment:
Q  58 taaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaa 157  Q
    |||||| ||||||||| ||||||||||||||||||| | ||| ||||| || | ||||||| ||||||||| ||||| |  |||||||||||||||||||    
T  13806744 taaattgaggtgtaccagtactcctacttcaaaaatttataatttaacgatta-ttttatgaaataaagagttatttatcaatatttatattttagaaaa 13806646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 56 - 167
Target Start/End: Original strand, 16086966 - 16087077
Alignment:
Q  56 cgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaa 155  Q
    |||| ||| |||||||||||||||| | ||||| |||||| |||| |||| || | ||||||| |||||| || ||||||| || |||||||||||||||    
T  16086966 cgtagattgaggtgtaccggtactcttgcttcataaatctataaactaacgatcaattttatgaaataaatagttatttgtcgacatttatattttagaa 16087065  T
Q  156 aatgtcatttca 167  Q
    ||| | ||||||    
T  16087066 aatatgatttca 16087077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 171
Target Start/End: Complemental strand, 2291189 - 2291051
Alignment:
Q  33 tttgggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctat 132  Q
    ||||||| ||||| |||||||  |||||| | |||||||||||||||| | | ||  |||| | ||||||||  || | ||||||| |||||| || |||    
T  2291189 tttgggagcttctacggtacactcgtaaaatgaggtgtaccggtactctttcatcccaaatttataaattaatgatcaattttatgaaataaatagttat 2291090  T
Q  133 ttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    |||| | ||||||||||||||||||| | ||||||||||    
T  2291089 ttgtcggtatttatattttagaaaatattatttcataag 2291051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 69 - 171
Target Start/End: Complemental strand, 23561478 - 23561376
Alignment:
Q  69 gtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcat 168  Q
    |||||||||||| | ||||| |||||| ||||||||| || | ||||||| |||||| || ||||||| |  ||| |||||||||||||| |||||||||    
T  23561478 gtaccggtactcgtgcttcataaatctataaattaacgatcaattttatgaaataaatagttatttgtaggcattgatattttagaaaatatcatttcat 23561379  T
Q  169 aag 171  Q
    |||    
T  23561378 aag 23561376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 158
Target Start/End: Original strand, 24189075 - 24189173
Alignment:
Q  60 aattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaat 158  Q
    |||||||||||||| |||| |||| |||| |||||| ||| ||||| ||||||||||||  |||||||| ||||| | ||  |||||||||||||||||    
T  24189075 aattaaggtgtaccagtacacctatttcataaatctataagttaacgataatttttatgtgataaagagatatttatcgacttttatattttagaaaat 24189173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 35 - 210
Target Start/End: Complemental strand, 42711336 - 42711162
Alignment:
Q  35 tgggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactat-aatttttatggaataaagagctatt 133  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||   ||| | |  | | |||||||||||| | |||||||| || ||| || | ||    
T  42711336 tgggaacttctacggtacatccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtgtt 42711238  T
Q  134 tgttgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    |||||| || ||||||||||||||| |||||| |||||       | |||||||||| |||| ||||||||||||||    
T  42711237 tgttgacatatatattttagaaaatatcattttataag-aaaaaacatcatttcattttttagaaaaatcatactaa 42711162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 58 - 171
Target Start/End: Complemental strand, 1343404 - 1343292
Alignment:
Q  58 taaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaa 157  Q
    |||||| || |||||||||||||||||| ||||||| | ||| ||||  || ||||| ||| ||||||||| ||||| | ||||||||||||||||||||    
T  1343404 taaattgagatgtaccggtactcctactccaaaaatttataatttaaggattatttt-atgaaataaagagttatttatcgatatttatattttagaaaa 1343306  T
Q  158 tgtcatttcataag 171  Q
      |||||| |||||    
T  1343305 catcattttataag 1343292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 171
Target Start/End: Complemental strand, 15591792 - 15591656
Alignment:
Q  35 tgggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctattt 134  Q
    ||||||||| | |||||||| | |||||||||||||||||||||| || ||||  |||| | |  |||||| || | ||||||| |||||| || |||||    
T  15591792 tgggaacttttacggtacattcataaattaaggtgtaccggtacttctgcttcctaaatttatgcattaacaatcaattttatgaaataaaaagttattt 15591693  T
Q  135 gttgatatttatattttagaaaatgtcatttcataag 171  Q
    || || |||| ||| | ||||||| ||||||||||||    
T  15591692 gtcgacatttttatctcagaaaatatcatttcataag 15591656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 170
Target Start/End: Original strand, 45704507 - 45704635
Alignment:
Q  42 ttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgata 141  Q
    |||| ||||||| || ||||||||||||||||||||| |||| |||| || ||  ||| ||||| || ||||||||| ||||||||| | | | | ||      
T  45704507 ttctacggtacacccttaaattaaggtgtaccggtacacctatttcataattcaataagttaacaatcatttttatgtaataaagagatgtctatcgact 45704606  T
Q  142 tttatattttagaaaatgtcatttcataa 170  Q
    ||||||||||| ||||| |||||||||||    
T  45704607 tttatattttaaaaaatatcatttcataa 45704635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 35 - 152
Target Start/End: Original strand, 7574550 - 7574668
Alignment:
Q  35 tgggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataa-tttttatggaataaagagctatt 133  Q
    ||||||||||| |||||||  |||||| |||||||||||| ||||||| ||||  || | | ||||| ||| |||| |||||||| |||||| |||||||    
T  7574550 tgggaacttctacggtacactcgtaaaataaggtgtaccgatactcctgcttcttaattttataaatgaacgataattttttatgtaataaatagctatt 7574649  T
Q  134 tgttgatatttatatttta 152  Q
    | |  ||||||||||||||    
T  7574650 tatcaatatttatatttta 7574668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 158
Target Start/End: Original strand, 29982057 - 29982179
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttg 135  Q
    ||||| |||| |||||||||| |||||||| ||||||| |||| |||| |||   |||   ||| ||||| || ||||||||| || |||||||||||||    
T  29982057 gggaatttctacggtacatccttaaattaatgtgtaccagtacacctatttcgtgaattaataatttaacaatcatttttatgtaacaaagagctatttg 29982156  T
Q  136 ttgatatttatattttagaaaat 158  Q
    | ||  |||||||||||||||||    
T  29982157 tcgacttttatattttagaaaat 29982179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 60 - 158
Target Start/End: Complemental strand, 30819831 - 30819733
Alignment:
Q  60 aattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaat 158  Q
    ||||||| |||||||||||  ||| |||| |||||  ||| ||||  || ||||||||| ||||||||| ||||||||||  |||||||||||||||||    
T  30819831 aattaagatgtaccggtacatctatttcataaatcaataagttaatgattatttttatgtaataaagagatatttgttgacttttatattttagaaaat 30819733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 66 - 206
Target Start/End: Complemental strand, 31743677 - 31743539
Alignment:
Q  66 ggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 165  Q
    ||||||||||||||||| |||||||||| | ||| ||||| || | ||||||| ||||||||| ||||| |  |||||||||||||| ||||  ||||||    
T  31743677 ggtgtaccggtactcctgcttcaaaaatttataatttaacgatta-ttttatgaaataaagagttatttataaatatttatattttataaaacatcattt 31743579  T
Q  166 cataagnnnnnnncgtcatttcattgtttataaaaatcata 206  Q
     |||||       | |||||||||||||||||| |||||||    
T  31743578 tataag-aaaaaacatcatttcattgtttataagaatcata 31743539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 171
Target Start/End: Complemental strand, 20884024 - 20883895
Alignment:
Q  42 ttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgata 141  Q
    |||| ||||||| || | |||||||||||||| |||| |||| || | |||||| ||| ||||| |||| |||||||  |||||||| ||||| | ||      
T  20884024 ttctacggtacacccttcaattaaggtgtaccagtacacctattttataaatctataagttaacgataacttttatgtgataaagagatatttatcgact 20883925  T
Q  142 tttatattttagaaaatgtcatttcataag 171  Q
    ||||||||||||||||| | || |||||||    
T  20883924 tttatattttagaaaatattatctcataag 20883895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 171
Target Start/End: Original strand, 48900518 - 48900647
Alignment:
Q  42 ttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgata 141  Q
    |||| |||||||||| ||| ||||| ||||||| ||| |||| |||| |||||  ||| | ||  || ||||||||| ||||||||| ||||||||||      
T  48900518 ttctacggtacatccttaatttaagatgtaccgatacacctatttcataaatcaataagtaaatgattatttttatgtaataaagagatatttgttgact 48900617  T
Q  142 tttatattttagaaaatgtcatttcataag 171  Q
    ||||||||||| ||||| | |||| |||||    
T  48900618 tttatattttaaaaaatattattttataag 48900647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 167
Target Start/End: Complemental strand, 41742971 - 41742851
Alignment:
Q  47 cggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttat 146  Q
    |||||||| |||| ||| || ||||||| ||||| |  |||| |||||| ||||||||| || | ||||||| |||||| || |||||||    ||||||    
T  41742971 cggtacattcgtacattgagatgtaccgatactcttgtttcataaatctataaattaacgatcaattttatgaaataaatagttatttgtctgcatttat 41742872  T
Q  147 attttagaaaatgtcatttca 167  Q
    |||||||||||||| ||||||    
T  41742871 attttagaaaatgtgatttca 41742851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 168
Target Start/End: Complemental strand, 1583961 - 1583903
Alignment:
Q  110 atttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcat 168  Q
    ||||||||| ||||||||||||||| || ||||||||||||||| |||  |||||||||    
T  1583961 atttttatgaaataaagagctatttattaatatttatattttaggaaacatcatttcat 1583903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 97 - 171
Target Start/End: Complemental strand, 15091013 - 15090939
Alignment:
Q  97 taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||||| || | ||| ||| |||||| || |||||||| |||||||||||||||||||  ||||||||||||    
T  15091013 taaattaacgatcactttaatgaaataaaaaggtatttgttaatatttatattttagaaaacatcatttcataag 15090939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 152
Target Start/End: Original strand, 28264749 - 28264867
Alignment:
Q  35 tgggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataa-tttttatggaataaagagctatt 133  Q
    ||||||||||| |||||||  |||||| |||||||||||| ||||||| ||||  || | | ||||| ||| |||| |||||||| |||||| | |||||    
T  28264749 tgggaacttctacggtacactcgtaaaataaggtgtaccgatactcctgcttcttaattttataaatgaacgataattttttatgtaataaataactatt 28264848  T
Q  134 tgttgatatttatatttta 152  Q
    | |  ||||||||||||||    
T  28264849 tatcaatatttatatttta 28264867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 171
Target Start/End: Original strand, 46879892 - 46880006
Alignment:
Q  58 taaattaaggtgtaccggtactcctacttcaaaaatctttaaa-ttaactataatttttatggaataaagagctatttgttgatatttatattttagaaa 156  Q
    ||||||||||||||||||||| | || |||| |||||  |||  ||||| || ||||||||| ||||||||  ||||||| ||  |||||||||||||||    
T  46879892 taaattaaggtgtaccggtacacttatttcataaatcaataaggttaacgattatttttatgtaataaagatatatttgtcgacttttatattttagaaa 46879991  T
Q  157 atgtcatttcataag 171  Q
    || | ||||| ||||    
T  46879992 atattatttcgtaag 46880006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 158
Target Start/End: Original strand, 968496 - 968621
Alignment:
Q  33 tttgggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctat 132  Q
    |||||||  |||| ||||||| || | |||||||||||||| |||| | || |||| ||||||  || ||||| ||||||||||||  ||||| || |||    
T  968496 tttgggagtttctacggtacacccttcaattaaggtgtaccagtacacatatttcataaatctacaagttaacgataatttttatgtgataaacagatat 968595  T
Q  133 ttgttgatatttatattttagaaaat 158  Q
    || | ||  |||||||||||||||||    
T  968596 ttatcgacttttatattttagaaaat 968621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 171
Target Start/End: Original strand, 19503142 - 19503255
Alignment:
Q  58 taaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaa 157  Q
    ||||||||| ||||||||||| |||  |||| |||||   || ||||| || ||||||| | || ||||| |||||||| ||  ||||||||||||||||    
T  19503142 taaattaagatgtaccggtacacctgtttcataaatcaaaaagttaacgatcatttttacgtaaaaaagaactatttgtcgacttttatattttagaaaa 19503241  T
Q  158 tgtcatttcataag 171  Q
    | | ||||||||||    
T  19503242 tattatttcataag 19503255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 169
Target Start/End: Original strand, 40856614 - 40856671
Alignment:
Q  112 ttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcata 169  Q
    ||||||| |||||| ||||||| ||| |||||||||||||||||||  ||||||||||    
T  40856614 ttttatgaaataaaaagctattagttaatatttatattttagaaaacatcatttcata 40856671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 170
Target Start/End: Complemental strand, 25867281 - 25867177
Alignment:
Q  67 gtgtaccggtactcctacttca-aaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 165  Q
    |||||||||||||| |  |||| ||||| | ||||||||| || | ||| ||| |||||| || |||||||  |||||||||||||||||||  ||||||    
T  25867281 gtgtaccggtactcttgtttcacaaaatatataaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcattt 25867182  T
Q  166 cataa 170  Q
    |||||    
T  25867181 cataa 25867177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 158
Target Start/End: Complemental strand, 29273382 - 29273266
Alignment:
Q  42 ttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgata 141  Q
    |||| ||||||| || |||||||||||||| |||||| |||  |||   |||   ||| ||||| || ||||||||| || |||||||||||||| ||      
T  29273382 ttctacggtacacccttaaattaaggtgtatcggtacacctgtttcgtgaattaataatttaacgatcatttttatgtaacaaagagctatttgtcgact 29273283  T
Q  142 tttatattttagaaaat 158  Q
    |||||||||||||||||    
T  29273282 tttatattttagaaaat 29273266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 80
Target Start/End: Complemental strand, 40942282 - 40942238
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactc 80  Q
    ||||||||||  ||||||||||||||||||| |||||||||||||    
T  40942282 gggaacttctatggtacatccgtaaattaagatgtaccggtactc 40942238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 171
Target Start/End: Original strand, 47068993 - 47069097
Alignment:
Q  67 gtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttc 166  Q
    |||||||||||||| |  |||| |||  || |||||||| || | ||| ||| |||||| || ||||| || |||||||||||||||||||  |||||||    
T  47068993 gtgtaccggtactcttgtttcacaaaatttaaaattaacgatcactttaatgaaataaaaaggtatttattaatatttatattttagaaaacatcatttc 47069092  T
Q  167 ataag 171  Q
    |||||    
T  47069093 ataag 47069097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 171
Target Start/End: Original strand, 9682103 - 9682162
Alignment:
Q  112 ttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||| |||||||||||||||| | |||||||||||||| ||||  | ||||||||||    
T  9682103 ttttatgaaataaagagctatttgctaatatttatattttataaaacattatttcataag 9682162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 171
Target Start/End: Original strand, 15584541 - 15584676
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttg 135  Q
    |||||||||| ||| |||  |||||||||  |||||||||||||| |  |||  |||||| ||||||||| || | ||||||  || ||| || |||||     
T  15584541 gggaacttctacggcacactcgtaaattacagtgtaccggtactcttgtttcctaaatctataaattaacgatcaattttataaaacaaatagttattta 15584640  T
Q  136 ttgatatttatattttagaaaatgtcatttcataag 171  Q
    | |  |||||||||||||||||| | ||||||||||    
T  15584641 tcggcatttatattttagaaaatataatttcataag 15584676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 171
Target Start/End: Original strand, 7574176 - 7574250
Alignment:
Q  97 taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||||| || ||||||||| |||||| |  |||||||  |||||||||||||| |||| ||||| |||||||    
T  7574176 taaattaacgatcatttttatgaaataaaaatttatttgtcaatatttatattttaaaaaacgtcatatcataag 7574250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 27956693 - 27956647
Alignment:
Q  34 ttgggaacttcttcggtacatccgtaaattaaggtgtaccggtactc 80  Q
    ||||||||||||  |||||| ||| ||||||||||||||||||||||    
T  27956693 ttgggaacttctatggtacacccgcaaattaaggtgtaccggtactc 27956647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 128
Target Start/End: Original strand, 37001021 - 37001091
Alignment:
Q  58 taaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagag 128  Q
    |||||||||||||| |||||| |||| |||| || ||  ||||||||| || ||||||||| |||||||||    
T  37001021 taaattaaggtgtatcggtacacctatttcataattcaataaattaacaatcatttttatgtaataaagag 37001091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 158
Target Start/End: Original strand, 38034747 - 38034845
Alignment:
Q  60 aattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaat 158  Q
    |||||||||||||| |||| | || |||| |||||| ||| ||||| ||||||||||||  ||||| |  ||||| | ||  |||||||||||||||||    
T  38034747 aattaaggtgtaccagtacacatatttcataaatctataagttaacaataatttttatgtgataaacaaatatttatcgacttttatattttagaaaat 38034845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 171
Target Start/End: Complemental strand, 39444310 - 39444236
Alignment:
Q  97 taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||||| || | ||| ||| |||||| || |||||||  |||||||||||||||||||  ||||||||||||    
T  39444310 taaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataag 39444236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 171
Target Start/End: Original strand, 40947035 - 40947109
Alignment:
Q  97 taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||||| || | ||| ||| |||||| || |||||||  |||||||||||||||||||  ||||||||||||    
T  40947035 taaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataag 40947109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 171
Target Start/End: Original strand, 8577947 - 8578058
Alignment:
Q  58 taaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaa 157  Q
    |||||| |||||||||  ||||| ||||||| |||| | ||||||||| || ||||| ||  |||||| || |||||||  ||||| |||||||| ||||    
T  8577947 taaattgaggtgtaccaatactcttacttcataaatttataaattaacgatcatttt-ataaaataaataggtatttgtcaatatt-atattttaaaaaa 8578044  T
Q  158 tgtcatttcataag 171  Q
    | ||||||||||||    
T  8578045 tatcatttcataag 8578058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 67 - 171
Target Start/End: Complemental strand, 9923446 - 9923341
Alignment:
Q  67 gtgtaccggtactcctacttca-aaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 165  Q
    |||||||||||||| |  |||| ||||| | ||||||||  || | ||| ||| |||||| || |||||||  |||||||||||||||||||  ||||||    
T  9923446 gtgtaccggtactcttgtttcacaaaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcattt 9923347  T
Q  166 cataag 171  Q
    ||||||    
T  9923346 cataag 9923341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 59 - 152
Target Start/End: Original strand, 21919712 - 21919804
Alignment:
Q  59 aaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatatttta 152  Q
    ||||| |||||||||||||||||| ||||||| || |  || ||||| || | ||||||| ||||||||| ||||| |  ||||||||||||||    
T  21919712 aaattgaggtgtaccggtactcctgcttcaaatatttacaatttaacgatta-ttttatgaaataaagagttatttatcaatatttatatttta 21919804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 59 - 152
Target Start/End: Original strand, 23182414 - 23182506
Alignment:
Q  59 aaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatatttta 152  Q
    |||||||||||||| ||||||||| ||||||| || |  || ||||| || | ||||||| ||||||||| ||||| |  ||||||||||||||    
T  23182414 aaattaaggtgtactggtactcctgcttcaaatatttacaatttaacgatta-ttttatgaaataaagagttatttatcaatatttatatttta 23182506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 67 - 171
Target Start/End: Complemental strand, 24505499 - 24505394
Alignment:
Q  67 gtgtaccggtactcctacttca-aaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 165  Q
    |||||||||||||| |  |||| ||||| | ||||||||  || | ||| ||| |||||| || |||||||  |||||||||||||||||||  ||||||    
T  24505499 gtgtaccggtactcttgtttcataaaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcattt 24505400  T
Q  166 cataag 171  Q
    ||||||    
T  24505399 cataag 24505394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 112 - 169
Target Start/End: Original strand, 27800104 - 27800161
Alignment:
Q  112 ttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcata 169  Q
    ||||||| |||||| ||||||| ||  |||||||||||||||||||  ||||||||||    
T  27800104 ttttatgaaataaaaagctattagtcaatatttatattttagaaaacatcatttcata 27800161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 67 - 171
Target Start/End: Original strand, 42902417 - 42902522
Alignment:
Q  67 gtgtaccggtactcctacttca-aaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 165  Q
    |||||||||||||| || |||| ||||| | ||||||||  || | ||| ||| |||||| || ||||| |  |||||||||||||||||||  ||||||    
T  42902417 gtgtaccggtactcttatttcacaaaatatataaattaatgatcactttaatgaaataaaaaggtatttatcaatatttatattttagaaaacatcattt 42902516  T
Q  166 cataag 171  Q
    ||||||    
T  42902517 cataag 42902522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 67 - 171
Target Start/End: Original strand, 45196835 - 45196940
Alignment:
Q  67 gtgtaccggtactcctacttca-aaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 165  Q
    |||||||||||||| |  |||| ||||| | ||||||||  || | ||| ||| |||||| || |||||||  |||||||||||||||||||  ||||||    
T  45196835 gtgtaccggtactcttgtttcacaaaatatataaattaatgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcattt 45196934  T
Q  166 cataag 171  Q
    ||||||    
T  45196935 cataag 45196940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 67 - 171
Target Start/End: Complemental strand, 47220331 - 47220226
Alignment:
Q  67 gtgtaccggtactcctacttca-aaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 165  Q
    |||||||||||||| |  |||| ||||| | ||||||||  || | ||| ||| |||||| || |||||||  |||||||||||||||||||  ||||||    
T  47220331 gtgtaccggtactcttgtttcacaaaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcattt 47220232  T
Q  166 cataag 171  Q
    ||||||    
T  47220231 cataag 47220226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 170
Target Start/End: Original strand, 32186454 - 32186558
Alignment:
Q  67 gtgtaccggtactcctacttca-aaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 165  Q
    |||||||||||||| |  |||| ||||| | ||||||||| || | ||| ||| |||||| || |||||||  |||||||||||||||||||  | ||||    
T  32186454 gtgtaccggtactcttgtttcacaaaatatataaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacattattt 32186553  T
Q  166 cataa 170  Q
    |||||    
T  32186554 cataa 32186558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 41913096 - 41913140
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactc 80  Q
    ||||||||||  |||||| ||| ||||||||||||||||||||||    
T  41913096 gggaacttctatggtacacccgcaaattaaggtgtaccggtactc 41913140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 115; Significance: 1e-58; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 36 - 210
Target Start/End: Complemental strand, 29651 - 29476
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaacta-taatttttatggaataaagagctattt 134  Q
    |||||| ||| ||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  29651 gggaacatctacggtacacctgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactattattttttatggaataaagagctattt 29552  T
Q  135 gttgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    |||||||||||||||||||||||||||||||  ||||       ||||||||||||||||||||||||||||||||    
T  29551 gttgatatttatattttagaaaatgtcattttgtaagaaaaaaacgtcatttcattgtttataaaaatcatactaa 29476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 114; Significance: 6e-58; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 37 - 170
Target Start/End: Original strand, 15383204 - 15383337
Alignment:
Q  37 ggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgt 136  Q
    ||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  15383204 ggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactattatttttatggaataaaaagctatttgt 15383303  T
Q  137 tgatatttatattttagaaaatgtcatttcataa 170  Q
    ||||||||||||||||||||||||||||||||||    
T  15383304 tgatatttatattttagaaaatgtcatttcataa 15383337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 31 - 209
Target Start/End: Original strand, 6264938 - 6265115
Alignment:
Q  31 attttgggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagct 130  Q
    |||| |||||||||| ||||||||||  |||||||| |||| ||||||||||||||||||||||||  |||||||||| |||||||||||||||||| ||    
T  6264938 atttagggaacttctacggtacatccacaaattaagatgtatcggtactcctacttcaaaaatcttctaattaactattatttttatggaataaagaact 6265037  T
Q  131 atttgttgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatacta 209  Q
    |||||||||||||||||||||||||||||||||||||||||       | |||||||||||||||||||||||||||||    
T  6265038 atttgttgatatttatattttagaaaatgtcatttcataag-aaaaaacatcatttcattgtttataaaaatcatacta 6265115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 37 - 209
Target Start/End: Complemental strand, 17010767 - 17010596
Alignment:
Q  37 ggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgt 136  Q
    ||||||||| | ||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||| | |||||| | |||||||| |||||||    
T  17010767 ggaacttctaccgtacacccgtaaattaaagtgtatcggtactcctacttcaaaaatctttaaattaactattaattttataggataaagagttatttgt 17010668  T
Q  137 tgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatacta 209  Q
    |||||||||||||||||||||||| |||| |||||       |||||||||||||||||||||||||||||||    
T  17010667 tgatatttatattttagaaaatgtaattttataag-aaaaaacgtcatttcattgtttataaaaatcatacta 17010596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 63 - 171
Target Start/End: Original strand, 30020384 - 30020492
Alignment:
Q  63 taaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtca 162  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||| |    
T  30020384 taaggtgtaccgatactcctactttaaaaatctttaaattaactattatttttatgaaataaagaactatttgttgatatttatattttagaaaatgtta 30020483  T
Q  163 tttcataag 171  Q
    |||||||||    
T  30020484 tttcataag 30020492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 40 - 171
Target Start/End: Original strand, 8376024 - 8376155
Alignment:
Q  40 acttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttga 139  Q
    |||||| ||||||| ||  ||||||||||||| || |||||||| || |||||| |||||||||||||| |||||||||||||||| |||||||||||||    
T  8376024 acttctacggtacacccacaaattaaggtgtatcgatactcctattttaaaaatttttaaattaactattatttttatggaataaaaagctatttgttga 8376123  T
Q  140 tatttatattttagaaaatgtcatttcataag 171  Q
    |||||||||||||||| |||||||||||||||    
T  8376124 tatttatattttagaagatgtcatttcataag 8376155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 58 - 171
Target Start/End: Original strand, 20469058 - 20469171
Alignment:
Q  58 taaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaa 157  Q
    ||||||||||||||| ||||||| |||||||||||||| |||||||||||| ||||||||| ||||||||||||||| ||||||||| ||||||||||||    
T  20469058 taaattaaggtgtacgggtactcttacttcaaaaatctataaattaactatcatttttatgaaataaagagctatttattgatatttgtattttagaaaa 20469157  T
Q  158 tgtcatttcataag 171  Q
    | ||||||||||||    
T  20469158 tatcatttcataag 20469171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 34 - 124
Target Start/End: Original strand, 34195877 - 34195967
Alignment:
Q  34 ttgggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataa 124  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  34195877 ttgggaacttctacggtacatccgcaaattaaggtgtaccggtacttctacttcaaaaatctttaaattaactattatttttatggaataa 34195967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 36 - 171
Target Start/End: Complemental strand, 21970713 - 21970578
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttg 135  Q
    |||||||||| |||||||  | ||||||  ||||||||||||||| ||||||  |||||| ||||||||| || | ||||||| |||||| || ||||||    
T  21970713 gggaacttctacggtacactcataaattctggtgtaccggtactcttacttcctaaatctataaattaacgatcaattttatgaaataaatagttatttg 21970614  T
Q  136 ttgatatttatattttagaaaatgtcatttcataag 171  Q
    | |  |||||||||||| ||||| ||||||||||||    
T  21970613 tcggcatttatattttacaaaatatcatttcataag 21970578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 58 - 171
Target Start/End: Original strand, 7344344 - 7344456
Alignment:
Q  58 taaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaa 157  Q
    |||||| ||||||||||||||||||||| ||||||| | ||| ||||  || ||||| ||| ||||||||| ||||| | ||||||||||||||||||||    
T  7344344 taaattgaggtgtaccggtactcctactccaaaaatttataatttaaggattatttt-atgaaataaagagttatttatcgatatttatattttagaaaa 7344442  T
Q  158 tgtcatttcataag 171  Q
    | |||||| |||||    
T  7344443 tatcattttataag 7344456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 58 - 158
Target Start/End: Complemental strand, 10091871 - 10091771
Alignment:
Q  58 taaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaa 157  Q
    ||||||| ||||||||||||| |||| |||| |||||  ||||||||| |||||||||||| ||||||| | ||||| ||||  ||||||||||||||||    
T  10091871 taaattatggtgtaccggtacacctatttcataaatcaataaattaacgataatttttatgtaataaagtgatatttattgacttttatattttagaaaa 10091772  T
Q  158 t 158  Q
    |    
T  10091771 t 10091771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 36 - 167
Target Start/End: Original strand, 29023619 - 29023750
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttg 135  Q
    |||||||||| |||||||  |||||||| |||||||||||||||| | ||||| |||||| |||| |||| || | ||||||| |||||| || ||||||    
T  29023619 gggaacttctacggtacactcgtaaattgaggtgtaccggtactcttgcttcataaatctataaactaacgatcaattttatgaaataaatagttatttg 29023718  T
Q  136 ttgatatttatattttagaaaatgtcatttca 167  Q
    | |  ||||||||||| |||||| | ||||||    
T  29023719 tcggcatttatattttggaaaatatgatttca 29023750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 36 - 167
Target Start/End: Original strand, 31644410 - 31644541
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttg 135  Q
    |||||||||| |||||||  |||||||| ||||||| |||||||| | ||||| |||||| |||| |||| || | ||||||| |||||| || ||||||    
T  31644410 gggaacttctacggtacactcgtaaattgaggtgtatcggtactcttgcttcataaatctataaactaacaatcaattttatgaaataaatagttatttg 31644509  T
Q  136 ttgatatttatattttagaaaatgtcatttca 167  Q
    | |  |||||||||||||||||| | ||||||    
T  31644510 tcggcatttatattttagaaaatatgatttca 31644541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 30 - 171
Target Start/End: Original strand, 10887803 - 10887944
Alignment:
Q  30 tattttgggaacttcttcggtacatc-cgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagag 128  Q
    |||| ||||||||||| ||||||| | | |||||| ||||||||||||||||||||||||||||| | ||| ||||| || | ||||||  |||||||||    
T  10887803 tattatgggaacttctacggtacacctcataaattgaggtgtaccggtactcctacttcaaaaatttataatttaacgatta-ttttataaaataaagag 10887901  T
Q  129 ctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
     ||||| |  |||||||||||||| ||||| | |||| |||||    
T  10887902 ttatttatcaatatttatattttaaaaaatattattttataag 10887944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 58 - 210
Target Start/End: Complemental strand, 2198166 - 2198015
Alignment:
Q  58 taaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaa 157  Q
    |||||||||||||||||||||  ||| |||| |||||  ||| ||||  || ||||||||| || |||||||||||| | ||  ||||||||||||||||    
T  2198166 taaattaaggtgtaccggtacatctatttcataaatcaataagttaaagatcatttttatgtaacaaagagctatttatcgacttttatattttagaaaa 2198067  T
Q  158 tgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    | | ||||||||||       | | |||||||||||||||| |||||||||||    
T  2198066 tattatttcataag-aaaaaacataatttcattgtttataagaatcatactaa 2198015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 35 - 152
Target Start/End: Complemental strand, 1706013 - 1705896
Alignment:
Q  35 tgggaacttcttcggtacatc-cgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatt 133  Q
    ||||||||||| ||||||| | | |||||| |||||||||||||||||| ||||||| || | ||| ||||| || | ||||||| ||||||||| ||||    
T  1706013 tgggaacttctacggtacacctcataaattgaggtgtaccggtactcctgcttcaaatatttataatttaacgatta-ttttatgaaataaagagttatt 1705915  T
Q  134 tgttgatatttatatttta 152  Q
    | |  ||||||||||||||    
T  1705914 tatcaatatttatatttta 1705896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 171
Target Start/End: Complemental strand, 32716003 - 32715874
Alignment:
Q  42 ttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgata 141  Q
    |||| ||||||| || |||||||||||||||| |||| |||| |||| || ||  ||| ||||| || ||||||||| ||||||||| | | | | ||      
T  32716003 ttctacggtacacccttaaattaaggtgtaccagtacacctatttcataattcaataagttaacaatcatttttatgtaataaagagatgtctatcgact 32715904  T
Q  142 tttatattttagaaaatgtcatttcataag 171  Q
    ||||||||||| ||||| ||||||||||||    
T  32715903 tttatattttaaaaaatatcatttcataag 32715874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 152
Target Start/End: Complemental strand, 4509835 - 4509720
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttg 135  Q
    |||||||||| |||||||  |  ||| | |||||||||||||||||| ||||| || | | ||||||||| ||| |||||||| |||||| ||||||||     
T  4509835 gggaacttctacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttataaattaacgatattttttatgtaataaatagctattt- 4509737  T
Q  136 ttgatatttatatttta 152  Q
    |  ||||||||||||||    
T  4509736 tcaatatttatatttta 4509720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 80
Target Start/End: Complemental strand, 6848920 - 6848876
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactc 80  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||    
T  6848920 gggaacttctacggtacacccgtaaattaaggtgtaccggtactc 6848876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 171
Target Start/End: Original strand, 33610712 - 33610836
Alignment:
Q  47 cggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttat 146  Q
    ||||||| || |||| |||| ||||||||||| |||| || | |||||  ||  ||||  || ||||||||| ||||||||| || |||||||  |||||    
T  33610712 cggtacacccttaaactaagatgtaccggtacacctattttataaatcaatatgttaatgattatttttatgtaataaagagataattgttgacttttat 33610811  T
Q  147 attttagaaaatgtcatttcataag 171  Q
    |||||||||||| | ||||||||||    
T  33610812 attttagaaaatattatttcataag 33610836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 158
Target Start/End: Original strand, 4979100 - 4979221
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttg 135  Q
    |||||||||| ||||||| | |||||||||||||||| |||| |  || |||| |||| | ||||||||  || | ||||||| |||||| || |||||     
T  4979100 gggaacttctacggtaca-ctgtaaattaaggtgtactggtatttttatttcataaatttataaattaatgatcaattttatgaaataaatagttattta 4979198  T
Q  136 ttgatatttatattttagaaaat 158  Q
    | | |||||||||||||||||||    
T  4979199 tcggtatttatattttagaaaat 4979221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 160
Target Start/End: Complemental strand, 26611852 - 26611750
Alignment:
Q  58 taaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaa 157  Q
    |||||||||||||| |||||| |||  |||| |||| |  || ||||| |||||||||||| ||||||||| ||||| | ||  || |||||||||||||    
T  26611852 taaattaaggtgtatcggtacacctgtttcataaatttacaagttaacgataatttttatgtaataaagagatatttatcgactttcatattttagaaaa 26611753  T
Q  158 tgt 160  Q
    |||    
T  26611752 tgt 26611750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 165
Target Start/End: Complemental strand, 1096610 - 1096493
Alignment:
Q  48 ggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttata 147  Q
    |||||| |||||||||| |||||||||||||||   |||  ||  | | ||||||||||||||||||||||    ||| || | |||||||| || ||||    
T  1096610 ggtacacccgtaaattacggtgtaccggtactctcgcttataatttttataaattaactataatttttatgaggaaaataggtgtttgttgacatatata 1096511  T
Q  148 ttttagaaaatgtcattt 165  Q
    ||||||||||| ||||||    
T  1096510 ttttagaaaatatcattt 1096493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 170
Target Start/End: Original strand, 18667689 - 18667824
Alignment:
Q  38 gaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgtt 137  Q
    |||||||| |||||||  ||||||||  ||||||||||||||| || |||  |||||| ||||||||| || | |||||||  ||||| || ||||| |     
T  18667689 gaacttctacggtacactcgtaaattgtggtgtaccggtactcttaattcctaaatctataaattaacgatcaattttatgagataaatagttatttatc 18667788  T
Q  138 g---atatttatattttagaaaatgtcatttcataa 170  Q
    |   | |||||||||||||||||| |||||| ||||    
T  18667789 ggcaacatttatattttagaaaatatcattttataa 18667824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 171
Target Start/End: Original strand, 32430227 - 32430316
Alignment:
Q  82 tacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||| |||||  ||||||||| || ||||||||| |||||  || ||||||| ||  ||| ||||||||||||| ||||||||||||    
T  32430227 tacttcataaatcaataaattaacaattatttttatgaaataataagttatttgtcgagttttgtattttagaaaatatcatttcataag 32430316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 152
Target Start/End: Complemental strand, 19474081 - 19473962
Alignment:
Q  33 tttgggaacttcttcggtacatc-cgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagcta 131  Q
    ||||||||||||| ||||||| | |  ||||| |||||||||||||||| | ||||||| || || || ||||| || ||||| ||| ||||||||| ||    
T  19474081 tttgggaacttctacggtacacctcacaaattgaggtgtaccggtactcttgcttcaaatattttcaatttaacaattatttt-atgaaataaagagtta 19473983  T
Q  132 tttgttgatatttatatttta 152  Q
    ||| |  ||||||||||||||    
T  19473982 tttatcaatatttatatttta 19473962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 206
Target Start/End: Original strand, 24081207 - 24081315
Alignment:
Q  97 taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttat 196  Q
    ||||||||| |||||||| ||| ||||||  |||||||||  ||||||||||||||| |||  ||||||||||||       | |||||| |||||||||    
T  24081207 taaattaacgataatttt-atgaaataaaatgctatttgtcaatatttatattttagtaaacatcatttcataagaaaaaaacttcattttattgtttat 24081305  T
Q  197 aaaaatcata 206  Q
    || |||||||    
T  24081306 aagaatcata 24081315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 152
Target Start/End: Complemental strand, 14508029 - 14507911
Alignment:
Q  34 ttgggaacttcttcggtacatc-cgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctat 132  Q
    |||||||||||| ||||||| | | |||||| |||||||||||||||||| ||||||| || |  || ||||  || | ||||||| ||||||||| |||    
T  14508029 ttgggaacttctacggtacacctcataaattgaggtgtaccggtactcctgcttcaaatatttgcaatttaatgatta-ttttatgaaataaagagttat 14507931  T
Q  133 ttgttgatatttatatttta 152  Q
    || |  ||||||||||||||    
T  14507930 ttatcaatatttatatttta 14507911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 171
Target Start/End: Complemental strand, 9226546 - 9226472
Alignment:
Q  97 taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||||| || | ||| ||| |||||| || |||||||  |||||||||||||||||||  ||||||||||||    
T  9226546 taaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataag 9226472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 206
Target Start/End: Complemental strand, 16893280 - 16893135
Alignment:
Q  59 aaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaat 158  Q
    ||||| ||||||||||||||||  |||||| |||| | ||||||||| ||   ||||||  |||||| || |||||||  ||| |||||||||||||||     
T  16893280 aaattgaggtgtaccggtactctcacttcataaatttataaattaacgat-tgttttattaaataaataggtatttgtcaata-ttatattttagaaaac 16893183  T
Q  159 gtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcata 206  Q
     ||||||||||||       |||||||||| | ||||||| |||||||    
T  16893182 atcatttcataaggaaaaaacgtcatttcaatatttataagaatcata 16893135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 152
Target Start/End: Complemental strand, 18772235 - 18772149
Alignment:
Q  67 gtgtaccggtactcctacttcaaaaatctttaaattaactataattttt-atggaataaagagctatttgttgatatttatatttta 152  Q
    ||||| |||||||||||||||| || | | ||||||||| || |||||| ||| || ||| | ||||||||| ||||||||||||||    
T  18772235 gtgtatcggtactcctacttcataattttataaattaacgatcattttttatgaaagaaataactatttgttaatatttatatttta 18772149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 171
Target Start/End: Original strand, 34315186 - 34315260
Alignment:
Q  97 taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||||| || | ||| ||| |||||| || |||||||  |||||||||||||||||||  ||||||||||||    
T  34315186 taaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataag 34315260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 67 - 171
Target Start/End: Complemental strand, 1339230 - 1339125
Alignment:
Q  67 gtgtaccggtactcctacttcaaaaa-tctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 165  Q
    |||||||||||||| |  |||||||| | | ||||||||  || | ||| ||| |||||| || |||||||  |||||||||||||||||||  ||||||    
T  1339230 gtgtaccggtactcttttttcaaaaaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcattt 1339131  T
Q  166 cataag 171  Q
    ||||||    
T  1339130 cataag 1339125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 67 - 171
Target Start/End: Complemental strand, 18871299 - 18871194
Alignment:
Q  67 gtgtaccggtactcctacttcaaaaa-tctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 165  Q
    |||||||||||||| |  |||||||| | | ||||||||  || | ||| ||| |||||| || |||||||  |||||||||||||||||||  ||||||    
T  18871299 gtgtaccggtactcttttttcaaaaaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcattt 18871200  T
Q  166 cataag 171  Q
    ||||||    
T  18871199 cataag 18871194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 72 - 157
Target Start/End: Complemental strand, 26315819 - 26315735
Alignment:
Q  72 ccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaa 157  Q
    ||||||||| |||||||||||| | ||| ||||| || ||||| ||| ||||||||| ||||| |  |||||| ||||||||||||    
T  26315819 ccggtactcttacttcaaaaatttataatttaacgattatttt-atgaaataaagagttatttatcaatatttgtattttagaaaa 26315735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 80
Target Start/End: Complemental strand, 2259310 - 2259266
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactc 80  Q
    |||||||||| ||||||| ||| |||||||||||||| |||||||    
T  2259310 gggaacttctacggtacacccgcaaattaaggtgtacaggtactc 2259266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 171
Target Start/End: Complemental strand, 9687106 - 9687046
Alignment:
Q  111 tttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    |||||||| |||||| | |||||| |  |||||||||||||| ||||| ||||||||||||    
T  9687106 tttttatgaaataaataactatttatcaatatttatattttataaaatatcatttcataag 9687046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 171
Target Start/End: Complemental strand, 26958721 - 26958661
Alignment:
Q  111 tttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    |||||||| |||||| ||||||||||  |||||||||||||| | ||  ||||||||||||    
T  26958721 tttttatgtaataaatagctatttgtcaatatttatattttatagaacatcatttcataag 26958661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 170
Target Start/End: Original strand, 32518778 - 32518882
Alignment:
Q  67 gtgtaccggtactcctacttca-aaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 165  Q
    ||||||| ||||||||  |||| ||||| | ||||||||  || | ||| ||| |||||| || |||||||  |||||||||||||||||||  ||||||    
T  32518778 gtgtaccagtactcctgtttcacaaaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcattt 32518877  T
Q  166 cataa 170  Q
    |||||    
T  32518878 cataa 32518882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 32833774 - 32833818
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactc 80  Q
    |||||||||| ||||||||||| |||||| ||||||| |||||||    
T  32833774 gggaacttctacggtacatccgcaaattacggtgtactggtactc 32833818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 151
Target Start/End: Complemental strand, 33574759 - 33574643
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataattttt-atggaataaagagctattt 134  Q
    |||||||||| |||||||  |  ||| | |||||||||||||||| | ||||| || | | ||||||||| || |||||| ||| |||||| ||||||||    
T  33574759 gggaacttctacggtacactcacaaagtgaggtgtaccggtactcttgcttcataattttataaattaacgatcattttttatgtaataaatagctattt 33574660  T
Q  135 gttgatatttatatttt 151  Q
     |  |||||||||||||    
T  33574659 ttcaatatttatatttt 33574643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 151
Target Start/End: Complemental strand, 33574937 - 33574821
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataattttt-atggaataaagagctattt 134  Q
    |||||||||| |||||||  |  ||| | |||||||||||||||| | ||||| || | | ||||||||| || |||||| ||| |||||| ||||||||    
T  33574937 gggaacttctacggtacactcacaaagtgaggtgtaccggtactcttgcttcataattttataaattaacgatcattttttatgtaataaatagctattt 33574838  T
Q  135 gttgatatttatatttt 151  Q
     |  |||||||||||||    
T  33574837 ttcaatatttatatttt 33574821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 113; Significance: 2e-57; HSPs: 70)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 42 - 210
Target Start/End: Original strand, 2318431 - 2318600
Alignment:
Q  42 ttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttt-tatggaataaagagctatttgttgat 140  Q
    |||| ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||    
T  2318431 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaattattattttttatggaataaagagctatttgttgat 2318530  T
Q  141 atttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    |||||||||||||||||||||||||  ||||       ||||||||||||||||||||||||||||||||    
T  2318531 atttatattttagaaaatgtcattttgtaagaaaaaaacgtcatttcattgtttataaaaatcatactaa 2318600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 36 - 210
Target Start/End: Original strand, 12362357 - 12362532
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttg 135  Q
    ||||||||||  |||||||||| ||||||||||||||||||||| |||  ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  12362357 gggaacttctaaggtacatccgcaaattaaggtgtaccggtacttctatctcaaaaatctttaaattaactattatttttatggaataaagagctatttg 12362456  T
Q  136 ttgatatttatattttagaaaatgtcatttcataa-gnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    ||||||| ||||||||||||||||||||||||||| |       |||||||| |||||||||||||||||||||||    
T  12362457 ttgatatatatattttagaaaatgtcatttcataaggaaaaaaacgtcatttgattgtttataaaaatcatactaa 12362532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 34 - 210
Target Start/End: Original strand, 13795271 - 13795445
Alignment:
Q  34 ttgggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatt 133  Q
    |||||||||||| ||||||| ||| |||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  13795271 ttgggaacttctacggtaca-ccgcaaattaaggtgtaccgatactcctactttaaaaatctttaaattaactattatttttatggaataaagagctatt 13795369  T
Q  134 tgttgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    |||||||||||||||||||| |||||||||||||||||       | | ||||||||||||||||||||||||||||    
T  13795370 tgttgatatttatattttaggaaatgtcatttcataag-aaaaaacattatttcattgtttataaaaatcatactaa 13795445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 36 - 210
Target Start/End: Complemental strand, 28332528 - 28332353
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttg 135  Q
    |||||||||| |||||||   | ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||     
T  28332528 gggaacttctacggtacacttgcaaattaaggtgtaccggtactcctatttcaaaaatctttaaattaactattatttttatggaataaagagctatttt 28332429  T
Q  136 ttgatatttatattttagaaaatgtcatttcataag-nnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    || |||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||    
T  28332428 tttatatttatattttagaaaatgtcatttcataagaaaaaaaacgtcatttcattgtttataaaaatcatactaa 28332353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 36 - 210
Target Start/End: Complemental strand, 13091319 - 13091144
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttg 135  Q
    |||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||| | |||||||||||| ||||||||| |||||| |||||||||    
T  13091319 gggaacttctacggtacacccgtaaattaaggtgtaccggtactcttacttcaaaaatttataaattaactatcatttttatgaaataaaaagctatttg 13091220  T
Q  136 ttgatatttatattttagaaaatgtcatttcataag-nnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    ||||||||||||||||||||||| ||||||||||||        | ||||||||||||||||||||||||||||||    
T  13091219 ttgatatttatattttagaaaatatcatttcataagaaaaaaaacatcatttcattgtttataaaaatcatactaa 13091144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 32 - 171
Target Start/End: Original strand, 21051317 - 21051456
Alignment:
Q  32 ttttgggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagcta 131  Q
    |||||| || |||| ||||||| |||||||||||||||||||| |||| ||| || ||||||||||||||||||||| ||||||||||||||||||||||    
T  21051317 ttttggcaatttctacggtacacccgtaaattaaggtgtaccgatacttctattttaaaaatctttaaattaactattatttttatggaataaagagcta 21051416  T
Q  132 tttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  21051417 tttgttgatatttatatcttagaaaatgtcatttcataag 21051456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 59 - 206
Target Start/End: Complemental strand, 27118098 - 27117951
Alignment:
Q  59 aaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaat 158  Q
    ||||||||||||||||||| ||||||||||||||  |||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  27118098 aaattaaggtgtaccggtattcctacttcaaaaaaatttaaattaactattatttttatggaataaagagttatttattgatatttatattttagaaaat 27117999  T
Q  159 gtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcata 206  Q
    ||||||| |||||       ||||||||||||||||||||||||||||    
T  27117998 gtcattttataagaaaaaaacgtcatttcattgtttataaaaatcata 27117951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 40 - 210
Target Start/End: Complemental strand, 9589610 - 9589440
Alignment:
Q  40 acttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttga 139  Q
    |||||| ||||||||||  ||||||||||||| |||||||| |||||||||||| | |||||||||||| ||||||||| |||||| |||||||||||||    
T  9589610 acttctacggtacatccacaaattaaggtgtatcggtactcttacttcaaaaatttataaattaactatcatttttatgaaataaaaagctatttgttga 9589511  T
Q  140 tatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    |||||||| |||||||||| ||||||||| ||       | ||||||||||||||||||||||||||||||    
T  9589510 tatttatactttagaaaatatcatttcatgagaaaaaagcatcatttcattgtttataaaaatcatactaa 9589440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 37 - 210
Target Start/End: Original strand, 3425090 - 3425261
Alignment:
Q  37 ggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgt 136  Q
    ||||||||| ||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| || |||||||  ||||||||    
T  3425090 ggaacttctacggtacacccgcaaattaaagtgtaccggtactcctacttcaaaaatctttaaattaactattatttttttgaaataaagtactatttgt 3425189  T
Q  137 tgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    ||||| | ||||||||||||||||||| |||||||       | ||||||||||||||||||||||||||||||    
T  3425190 tgata-taatattttagaaaatgtcatctcataag-aaaaaacttcatttcattgtttataaaaatcatactaa 3425261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 36 - 210
Target Start/End: Complemental strand, 14967637 - 14967462
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttg 135  Q
    |||||||||| ||||||| | | ||||||||||||| |||||||| |||||||||||| | |||||||||||| ||||||||| |||||| |||||||||    
T  14967637 gggaacttctacggtacacctgcaaattaaggtgtatcggtactcttacttcaaaaatttataaattaactatcatttttatgaaataaaaagctatttg 14967538  T
Q  136 ttgatatttatattttagaaaatgtcatttcataag-nnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    ||||||| ||||||||||||||| ||||||||||||        | ||||||||||||||||||||||||||||||    
T  14967537 ttgatatctatattttagaaaatatcatttcataagaaaaaaagcatcatttcattgtttataaaaatcatactaa 14967462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 42 - 210
Target Start/End: Complemental strand, 41802507 - 41802340
Alignment:
Q  42 ttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgata 141  Q
    |||| |||||||||| ||||||||||||||| ||||||| || || |||||| | |||||||||||| ||||||||| ||||||||||||||||||||||    
T  41802507 ttctacggtacatccataaattaaggtgtactggtactcttattttaaaaatttataaattaactatcatttttatgaaataaagagctatttgttgata 41802408  T
Q  142 tttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    ||| |||||||||||||  ||||| |||||       | |||||||||| |||||||||||||||||||    
T  41802407 tttgtattttagaaaataacatttaataag-aaaaaacatcatttcattatttataaaaatcatactaa 41802340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 59 - 210
Target Start/End: Complemental strand, 29744285 - 29744135
Alignment:
Q  59 aaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaat 158  Q
    ||||||| |||||||||||||  | |||||||||| | |||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  29744285 aaattaaagtgtaccggtacttttgcttcaaaaatttataaattaactatcatttttatgaaataaagagctatttattgatatttatattttagaaaat 29744186  T
Q  159 gtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
     ||||||||||||       | |||||||||| |||||||||||||||||||    
T  29744185 atcatttcataag-aaaaaacatcatttcattatttataaaaatcatactaa 29744135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 95 - 210
Target Start/End: Original strand, 37431409 - 37431523
Alignment:
Q  95 tttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgttt 194  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||       | ||||||  ||||||    
T  37431409 tttaaattaactattatttttatgaaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag-aaaaatcatcatttttttgttt 37431507  T
Q  195 ataaaaatcatactaa 210  Q
    ||||||||||||||||    
T  37431508 ataaaaatcatactaa 37431523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 59 - 210
Target Start/End: Complemental strand, 35682477 - 35682325
Alignment:
Q  59 aaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaat 158  Q
    |||||| | |||||| |||||| | |||||||||||  ||||||| |||| ||||||||| ||||||||||||| ||||||||||||||||||| |||||    
T  35682477 aaattaggatgtaccagtactcttgcttcaaaaatcaataaattacctatcatttttatgaaataaagagctatatgttgatatttatattttaaaaaat 35682378  T
Q  159 gtcatttcataag-nnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
     ||||||||||||        | ||||||||||||||||||||||||||||||    
T  35682377 atcatttcataagaaaaaaaacatcatttcattgtttataaaaatcatactaa 35682325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 60 - 171
Target Start/End: Original strand, 35817373 - 35817484
Alignment:
Q  60 aattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatg 159  Q
    |||||||||||| |||||||  | ||| |||||||| | |||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||     
T  35817373 aattaaggtgtatcggtacttttgctttaaaaatctatcaattaactataatttttatgaaataaaatgctatttgttgatatttatattttagaaaata 35817472  T
Q  160 tcatttcataag 171  Q
    ||||||||||||    
T  35817473 tcatttcataag 35817484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 36 - 158
Target Start/End: Complemental strand, 17069391 - 17069269
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttg 135  Q
    |||||||||| |||| ||  |||||||| |||||||||||||||||| ||||| |||||| |||| |||| || | ||||||| |||||| || ||||||    
T  17069391 gggaacttctacggtgcactcgtaaattgaggtgtaccggtactcctgcttcataaatctataaactaacgatcaattttatgaaataaatagttatttg 17069292  T
Q  136 ttgatatttatattttagaaaat 158  Q
    | |  ||||||||| ||||||||    
T  17069291 tcggcatttatattatagaaaat 17069269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 27 - 210
Target Start/End: Complemental strand, 34303064 - 34302880
Alignment:
Q  27 ttttattt-tgggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataattttt-atggaataa 124  Q
    |||||||| ||||||||||| ||||||| | | |||||| |||||||||||||||  ||||  ||  | | ||||||||||||||||||| ||| || ||    
T  34303064 ttttatttatgggaacttctacggtacacctgcaaattacggtgtaccggtactctcacttataatttttataaattaactataattttttatgaaaaaa 34302965  T
Q  125 agagctatttgttgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    | || | |||||||| || ||||||||||||||| |||||| |||||         |||||||||| |||||||||||||||||||    
T  34302964 ataggtgtttgttgacatatatattttagaaaatatcattttataagaaaaaat-atcatttcattttttataaaaatcatactaa 34302880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 56 - 171
Target Start/End: Original strand, 1490707 - 1490822
Alignment:
Q  56 cgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaa 155  Q
    |||||||||||||||| || || || | |||||||||||| |||||||| ||| | ||||||| |||||| || | |||||||| |||||||||||| ||    
T  1490707 cgtaaattaaggtgtatcgttattcttgcttcaaaaatctataaattaaatatcacttttatgaaataaaaagttttttgttgacatttatattttaaaa 1490806  T
Q  156 aatgtcatttcataag 171  Q
    | | |||||| |||||    
T  1490807 actatcattttataag 1490822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 58 - 167
Target Start/End: Original strand, 2270806 - 2270915
Alignment:
Q  58 taaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaa 157  Q
    |||||| |||||||||||||||| | ||||| |||||| ||||||||| || | ||||||| |||||| |  ||||||| |  |||||||||||||||||    
T  2270806 taaattgaggtgtaccggtactcttgcttcataaatctataaattaacgatcaattttatgaaataaataattatttgtcggcatttatattttagaaaa 2270905  T
Q  158 tgtcatttca 167  Q
    | | ||||||    
T  2270906 tatgatttca 2270915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 29 - 210
Target Start/End: Complemental strand, 22780926 - 22780745
Alignment:
Q  29 ttattttgggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataattttta-tggaataaaga 127  Q
    |||| |||||||||||| |||||||   | |||||||| |||||||| |||| |  || |||||| | |||||||||||| ||||||  || || ||| |    
T  22780926 ttatcttgggaacttctacggtacacttgcaaattaagatgtaccggcactcttgtttaaaaaatttataaattaactatcattttttgtgaaaaaaata 22780827  T
Q  128 gctatttgttgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    | | |||||||| ||||||| |||||||||| ||||||||||||         |||||||||| |||||||||||||||||||    
T  22780826 gttgtttgttgacatttatagtttagaaaatatcatttcataagaaaaatt-atcatttcattttttataaaaatcatactaa 22780745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 207
Target Start/End: Complemental strand, 15264443 - 15264278
Alignment:
Q  42 ttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgata 141  Q
    |||| ||||||| || ||||||||| |||| |||||| |||| |||| |||||  ||| ||||  || ||||||||| ||||||  | || |||||||      
T  15264443 ttctacggtacacccttaaattaagatgtatcggtacacctatttcataaatcaataagttaatgattatttttatgtaataaaaggatacttgttgact 15264344  T
Q  142 tttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatac 207  Q
    ||||||||||||||||| | ||||||||||       | |||||||||| ||||||| ||||||||    
T  15264343 tttatattttagaaaatattatttcataagaaaaaaacatcatttcattctttataagaatcatac 15264278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 167
Target Start/End: Complemental strand, 36156244 - 36156116
Alignment:
Q  39 aacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttg 138  Q
    ||||||| | |||||  |||||||| |||||||||||||||| | ||| | |||||| |||| |||| || | ||||||| |||||| || ||||||| |    
T  36156244 aacttctacagtacactcgtaaattgaggtgtaccggtactcttgctttataaatctataaactaacgatcaattttatgaaataaatagttatttgtcg 36156145  T
Q  139 atatttatattttagaaaatgtcatttca 167  Q
      |||||||||||||||||| | ||||||    
T  36156144 gcatttatattttagaaaatatgatttca 36156116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 39 - 158
Target Start/End: Original strand, 1445729 - 1445848
Alignment:
Q  39 aacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttg 138  Q
    ||||||| |||||||| |||||||| || |||| ||||| || ||||||| |||| | |||| |||| || | ||||||| |||||| || ||||||| |    
T  1445729 aacttctacggtacattcgtaaattgagatgtatcggtattcttacttcataaatttataaactaacgatcaattttatgaaataaatagttatttgtcg 1445828  T
Q  139 atatttatattttagaaaat 158  Q
      ||||||||||||||||||    
T  1445829 gcatttatattttagaaaat 1445848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 56 - 171
Target Start/End: Original strand, 13645540 - 13645655
Alignment:
Q  56 cgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaa 155  Q
    ||||||||  ||||||||| ||||| ||||||  |||||| ||||||||| || | ||||||| |||||| || ||||||| |  |||||||| ||||||    
T  13645540 cgtaaattgtggtgtaccgttactcttacttcctaaatctataaattaacgatcaattttatgaaataaatagttatttgtcggcatttatatcttagaa 13645639  T
Q  156 aatgtcatttcataag 171  Q
    ||  ||||||||||||    
T  13645640 aacatcatttcataag 13645655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 60 - 171
Target Start/End: Original strand, 14575497 - 14575608
Alignment:
Q  60 aattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatg 159  Q
    |||||||||||||| |||| |||| |||| |||||| ||| ||||| ||||||||||||  ||||| || ||||| | ||  |||||||||||||||||     
T  14575497 aattaaggtgtaccagtacacctatttcataaatctataagttaacgataatttttatgtgataaaaagatatttatcgacttttatattttagaaaata 14575596  T
Q  160 tcatttcataag 171  Q
    | || |||||||    
T  14575597 ttatctcataag 14575608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 97 - 171
Target Start/End: Complemental strand, 25395147 - 25395073
Alignment:
Q  97 taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||||| || ||||||||  ||||||||||||||  ||||| ||||||||||||||||| ||||||| ||||    
T  25395147 taaattaacaatgatttttatacaataaagagctattcattgatttttatattttagaaaatatcatttcgtaag 25395073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 60 - 158
Target Start/End: Original strand, 35777405 - 35777503
Alignment:
Q  60 aattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaat 158  Q
    |||||||||||||| |||| |||| |||| |||||| ||| ||||| ||||||||||||  |||||||| | ||| | ||  |||||||||||||||||    
T  35777405 aattaaggtgtaccagtacacctatttcataaatctataagttaacgataatttttatgtgataaagagatctttatcgacttttatattttagaaaat 35777503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 171
Target Start/End: Complemental strand, 13127388 - 13127251
Alignment:
Q  35 tgggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataa-tttttatggaataaagagctatt 133  Q
    ||||||||||| |||||||| |  ||| | |||||||||||||||| | ||||| || | | ||||||||| |||| |||||||| |||||| | |||||    
T  13127388 tgggaacttctacggtacattcacaaaatgaggtgtaccggtactctttcttcataattttataaattaacgataattttttatgaaataaataactatt 13127289  T
Q  134 tgttgatatttatattttagaaaatgtcatttcataag 171  Q
    | |  |||||||||||||| | ||  ||||||||||||    
T  13127288 tatcaatatttatattttatagaacatcatttcataag 13127251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 80
Target Start/End: Complemental strand, 13410949 - 13410904
Alignment:
Q  35 tgggaacttcttcggtacatccgtaaattaaggtgtaccggtactc 80  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||    
T  13410949 tgggaacttctacggtacatccgcaaattaaggtgtaccggtactc 13410904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 171
Target Start/End: Complemental strand, 31588642 - 31588506
Alignment:
Q  35 tgggaacttcttcggtacatc-cgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatt 133  Q
    ||||||||||| ||||||| | |  ||||| |||||||||||||||  |  |||| |||| | ||||||||  || | ||||||| |||||| | |||||    
T  31588642 tgggaacttctacggtacacctcacaaattgaggtgtaccggtacttttgtttcataaatttataaattaatgatca-ttttatgaaataaaaaactatt 31588544  T
Q  134 tgttgatatttatattttagaaaatgtcatttcataag 171  Q
    |||  |||||||||||||||||||| ||||||||||||    
T  31588543 tgtcaatatttatattttagaaaatatcatttcataag 31588506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 49 - 169
Target Start/End: Original strand, 7456221 - 7456341
Alignment:
Q  49 gtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatat 148  Q
    |||||| | |||||||||||||| | |||  | || |||| |||||   |||||||| || ||||||||| | ||||||||||||||||||  |||||||    
T  7456221 gtacattcttaaattaaggtgtatcagtatacttatttcacaaatcaacaaattaacgatcatttttatgtagtaaagagctatttgttgacttttatat 7456320  T
Q  149 tttagaaaatgtcatttcata 169  Q
    |||| ||||| | ||||||||    
T  7456321 tttaaaaaatattatttcata 7456341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 39 - 167
Target Start/End: Original strand, 10400704 - 10400832
Alignment:
Q  39 aacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttg 138  Q
    ||||||| | ||||||  ||||||| ||||||| | |||||| | ||||| |||||| |||| |||| || | ||||||| |||||| || ||||||| |    
T  10400704 aacttctacagtacatttgtaaattgaggtgtatcagtactcttgcttcataaatctataaactaacgatcaattttatgaaataaatagttatttgtcg 10400803  T
Q  139 atatttatattttagaaaatgtcatttca 167  Q
      |||||||||||||||||| | ||||||    
T  10400804 gcatttatattttagaaaatatgatttca 10400832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 67 - 170
Target Start/End: Complemental strand, 32624552 - 32624448
Alignment:
Q  67 gtgtaccggtactcctacttcaaaaatctt-taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 165  Q
    |||||||||||||| |  |||| ||| ||| ||||||||| || ||||||||  |||||| || |||||||  ||||||||||||||||||| ||||| |    
T  32624552 gtgtaccggtactcttgtttcacaaaacttataaattaacgatcatttttataaaataaaaagttatttgtcaatatttatattttagaaaacgtcatat 32624453  T
Q  166 cataa 170  Q
    |||||    
T  32624452 cataa 32624448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 158
Target Start/End: Complemental strand, 41609485 - 41609369
Alignment:
Q  42 ttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgata 141  Q
    |||| ||||||| || | |||||||||||||| ||||  ||| |||| |||||| ||| ||||| ||||||||||||  |||||||| ||||| | ||      
T  41609485 ttctacggtacacccttcaattaaggtgtaccagtacatctatttcataaatctataagttaacgataatttttatgtgataaagagatatttatcgact 41609386  T
Q  142 tttatattttagaaaat 158  Q
    ||||||||||| |||||    
T  41609385 tttatattttaaaaaat 41609369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 152
Target Start/End: Complemental strand, 13119176 - 13119089
Alignment:
Q  65 aggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatatttta 152  Q
    |||||||||||||||||| ||||| || | | ||||||||| || ||||||||  |||||| |||||||| |  ||||||||||||||    
T  13119176 aggtgtaccggtactcctgcttcataattttataaattaacgatcatttttatataataaatagctatttttcaatatttatatttta 13119089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 157
Target Start/End: Complemental strand, 23408636 - 23408538
Alignment:
Q  58 taaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaa 157  Q
    |||||| ||||||||| || || ||||||||||||| | ||| ||||| || ||||| ||| ||||||||| ||||| |  |||||||||||||||||||    
T  23408636 taaattgaggtgtaccagtgcttctacttcaaaaatttataatttaacgatcatttt-atgaaataaagagttatttatcaatatttatattttagaaaa 23408538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 97 - 171
Target Start/End: Original strand, 13588926 - 13589000
Alignment:
Q  97 taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||||| || | ||| ||| |||||| || |||||||  |||||||||||||||||||| ||||||||||||    
T  13588926 taaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaatatcatttcataag 13589000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 96 - 158
Target Start/End: Original strand, 33654889 - 33654951
Alignment:
Q  96 ttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaat 158  Q
    |||||||||| || ||||||||| ||||||||| ||||||||||  ||||||||||| |||||    
T  33654889 ttaaattaacgattatttttatgaaataaagagttatttgttgacttttatattttaaaaaat 33654951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 49 - 171
Target Start/End: Complemental strand, 43167335 - 43167213
Alignment:
Q  49 gtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatat 148  Q
    ||||| || ||||||||||| || |||||| |||  |||| |||||  ||| ||||  || || |||||| || |||||||||||||| ||  |||||||    
T  43167335 gtacacccttaaattaaggtatatcggtacacctgtttcataaatcaataagttaaagatcatctttatgtaacaaagagctatttgtcgacttttatat 43167236  T
Q  149 tttagaaaatgtcatttcataag 171  Q
    |||||||||| | ||||||||||    
T  43167235 tttagaaaatattatttcataag 43167213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 171
Target Start/End: Original strand, 664752 - 664881
Alignment:
Q  42 ttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgata 141  Q
    |||| ||||||| || | |||||||||||||| ||||  ||| |||| |||||| ||| ||||| |||||||| |||  |||||||| ||||| | ||      
T  664752 ttctacggtacaaccttcaattaaggtgtaccagtacatctaattcataaatctataagttaacgataattttaatgtgataaagagatatttatcgact 664851  T
Q  142 tttatattttagaaaatgtcatttcataag 171  Q
    ||||||| ||||||||| | || |||||||    
T  664852 tttatatcttagaaaatattatctcataag 664881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 168
Target Start/End: Original strand, 4839521 - 4839578
Alignment:
Q  111 tttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcat 168  Q
    |||||||  ||||||||| ||||||| ||| ||||||||||||||||| |||||||||    
T  4839521 tttttataaaataaagagttatttgtcgatttttatattttagaaaatatcatttcat 4839578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 152
Target Start/End: Complemental strand, 6260424 - 6260307
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataattttt-atggaataaagagctattt 134  Q
    |||||||||| |||||||  | |||| | |||||||||||||||| | ||||| || | | ||||| ||||||  ||||| ||| |||||| ||||||||    
T  6260424 gggaacttctacggtacactcataaaatgaggtgtaccggtactcttccttcataattttataaataaactatctttttttatgtaataaatagctattt 6260325  T
Q  135 gttgatatttatatttta 152  Q
    ||  ||||||||||||||    
T  6260324 gtcaatatttatatttta 6260307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 171
Target Start/End: Complemental strand, 19126257 - 19126184
Alignment:
Q  98 aaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    |||||||| || | ||| ||| |||||| || |||||||| |||||||||||||||||||  ||||||||||||    
T  19126257 aaattaacgatcactttaatgaaataaaaagatatttgttaatatttatattttagaaaacatcatttcataag 19126184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 152
Target Start/End: Complemental strand, 5360103 - 5360015
Alignment:
Q  65 aggtgtaccggtactcctacttcaaaaatctttaaattaactataattttt-atggaataaagagctatttgttgatatttatatttta 152  Q
    ||||||| |||||||||| ||||| || | | ||||||||| ||||||||| ||| ||||||  |||||||||  ||||||||||||||    
T  5360103 aggtgtatcggtactcctgcttcataattttataaattaacgataattttttatgtaataaattgctatttgtcaatatttatatttta 5360015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 210
Target Start/End: Complemental strand, 14054807 - 14054646
Alignment:
Q  48 ggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttata 147  Q
    |||||| || |||||||| |||||||||||| |||| |||| |||||  ||| ||| | || |||||| || ||||||||| ||||| |  |  ||||||    
T  14054807 ggtacacccttaaattaaagtgtaccggtacacctatttcataaatcaataagttatcgatcatttttctgtaataaagagatatttatcaacttttata 14054708  T
Q  148 ttttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    ||||||||||| | |||| |||||       |||||||||||  ||||||| |||||||||||    
T  14054707 ttttagaaaatattattttataag-aaaaaacgtcatttcatcctttataagaatcatactaa 14054646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 210
Target Start/End: Complemental strand, 32467451 - 32467275
Alignment:
Q  34 ttgggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactat-aatttttatggaataaagagctat 132  Q
    |||||||||||| ||||||| ||| |||||| |||||||||||||||   |||  ||  | | |||||||||||| | |||||||| |  ||| || | |    
T  32467451 ttgggaacttctacggtacacccgcaaattacggtgtaccggtactctcgcttgcaatttttataaattaactatcattttttatgaagaaaataggtgt 32467352  T
Q  133 ttgttgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    ||||||| || ||||||| ||||||| |||||| |||||         |||||||||| |||||||||||||||||||    
T  32467351 ttgttgacatatatatttcagaaaatatcattttataagaaaaaat-atcatttcattttttataaaaatcatactaa 32467275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 170
Target Start/End: Original strand, 37963025 - 37963129
Alignment:
Q  67 gtgtaccggtactcctacttca-aaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 165  Q
    |||||||||||||| |  |||| ||||| | ||||||||| || ||||||||  |||||| |  |||||||  ||||||||||||||||||| ||||| |    
T  37963025 gtgtaccggtactcttgtttcacaaaatttataaattaacgatcatttttataaaataaaaatttatttgtcaatatttatattttagaaaacgtcatat 37963124  T
Q  166 cataa 170  Q
    |||||    
T  37963125 cataa 37963129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 152
Target Start/End: Original strand, 9913218 - 9913305
Alignment:
Q  65 aggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatatttta 152  Q
    |||||||||||||||||| ||||  || | | ||||| |||||| ||||||||| | |||| | ||||||||  ||||||||||||||    
T  9913218 aggtgtaccggtactcctgcttcttaattttataaatgaactatcatttttatgtagtaaataactatttgtcaatatttatatttta 9913305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 171
Target Start/End: Complemental strand, 10453602 - 10453551
Alignment:
Q  120 aataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    |||||| || |||||||| |||||||||||||||||||  ||||||||||||    
T  10453602 aataaaaaggtatttgttaatatttatattttagaaaacatcatttcataag 10453551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 158
Target Start/End: Complemental strand, 14721449 - 14721338
Alignment:
Q  47 cggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttat 146  Q
    ||||||| || | |||||||||||||  |||  |||| |||| |||||| ||| ||||  ||||||||||||  |||||||| ||||| | ||  |||||    
T  14721449 cggtacacccttcaattaaggtgtactagtatacctatttcataaatctataagttaaagataatttttatgtgataaagagatatttatcgacttttat 14721350  T
Q  147 attttagaaaat 158  Q
    ||||||||||||    
T  14721349 attttagaaaat 14721338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 170
Target Start/End: Complemental strand, 31076856 - 31076817
Alignment:
Q  131 atttgttgatatttatattttagaaaatgtcatttcataa 170  Q
    |||||||||||||| ||||||||||||| |||||||||||    
T  31076856 atttgttgatatttttattttagaaaatatcatttcataa 31076817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 171
Target Start/End: Complemental strand, 34259917 - 34259810
Alignment:
Q  65 aggtgtaccggtactcctacttcaaaaatctttaaattaactataattttt-atggaataaagagctatttgttgatatttatattttagaaaatgtcat 163  Q
    |||| ||||||||||||| ||||| || | | ||||||||| || |||||| ||| |||||| | ||||||||  |||||||||||||| | ||  ||||    
T  34259917 aggtctaccggtactcctgcttcataattttataaattaacgatcattttttatgtaataaataactatttgtcaatatttatattttatagaacatcat 34259818  T
Q  164 ttcataag 171  Q
    ||||||||    
T  34259817 ttcataag 34259810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 164
Target Start/End: Complemental strand, 972501 - 972427
Alignment:
Q  90 aaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatt 164  Q
    |||||| ||| ||||| ||||||||||||  |||||||| ||||| | ||  ||||||||||||||||| |||||    
T  972501 aaatctataagttaacgataatttttatgtgataaagagatatttatcgacttttatattttagaaaatatcatt 972427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 157
Target Start/End: Original strand, 4039493 - 4039590
Alignment:
Q  59 aaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaa 157  Q
    |||||||||||||||||||||| ||||||| |||| | |||||||| ||  | ||||||  ||||||  | |||||  | |||||||||||||||||||    
T  4039493 aaattaaggtgtaccggtactcttacttcataaatttataaattaattacca-ttttataaaataaaatgttatttaataatatttatattttagaaaa 4039590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 171
Target Start/End: Original strand, 28770008 - 28770082
Alignment:
Q  97 taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||||| || | ||| ||| |||||| || |||||||  |||||||||||||||||||  ||||||||||||    
T  28770008 taaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataag 28770082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 210
Target Start/End: Original strand, 32063556 - 32063699
Alignment:
Q  67 gtgtaccggtactcctacttca-aaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 165  Q
    |||||||||||||| |  |||| ||||| | ||||||| | || | ||| ||| |||||| || |||||||  |||||||||||||||||||  ||||||    
T  32063556 gtgtaccggtactcttgtttcacaaaatatataaattaccgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcattt 32063655  T
Q  166 cataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    ||||||       | ||||||||||||||||||  ||||||||||    
T  32063656 cataag-aaaaatcatcatttcattgtttataaggatcatactaa 32063699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 115
Target Start/End: Complemental strand, 1368138 - 1368081
Alignment:
Q  58 taaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataattttt 115  Q
    ||||||||||||||||||||||  | ||||| |||| | ||||||||||||| |||||    
T  1368138 taaattaaggtgtaccggtacttttccttcataaatttataaattaactatatttttt 1368081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 98 - 171
Target Start/End: Original strand, 2148189 - 2148262
Alignment:
Q  98 aaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    |||||||| || | ||| ||| |||||| || |||||||| |||||||||||||| ||||  ||||||||||||    
T  2148189 aaattaacgatcactttaatgaaataaaaaggtatttgttaatatttatattttaaaaaacatcatttcataag 2148262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 67 - 171
Target Start/End: Original strand, 8068350 - 8068455
Alignment:
Q  67 gtgtaccggtactcctacttca-aaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 165  Q
    |||||||||||||| |  |||| ||||| | ||||||||  || | ||| ||| |||||| || |||||||  |||||||||||||||||||  ||||||    
T  8068350 gtgtaccggtactcttgtttcataaaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcattt 8068449  T
Q  166 cataag 171  Q
    ||||||    
T  8068450 cataag 8068455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 18002684 - 18002772
Alignment:
Q  68 tgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaa 157  Q
    ||||||||||||||| |||||||||| | ||| ||||  || | ||||||  ||||||||| ||||| |  |||||||||||||||||||    
T  18002684 tgtaccggtactcctgcttcaaaaatttataatttaatgatta-ttttataaaataaagagttatttatcaatatttatattttagaaaa 18002772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 110 - 171
Target Start/End: Complemental strand, 20464910 - 20464850
Alignment:
Q  110 atttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||||| ||||||||||||||| || | |||  ||||||| ||||||||||||||||||    
T  20464910 atttttatgaaataaagagctattt-ttcaaattgttattttataaaatgtcatttcataag 20464850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 67 - 171
Target Start/End: Complemental strand, 25684439 - 25684334
Alignment:
Q  67 gtgtaccggtactcctacttca-aaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 165  Q
    |||||||||||||| |  |||| ||||| | ||||||||  || | ||| ||| |||||| || |||||||  |||||||||||||||||||  ||||||    
T  25684439 gtgtaccggtactcttgtttcacaaaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcattt 25684340  T
Q  166 cataag 171  Q
    ||||||    
T  25684339 cataag 25684334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 112 - 169
Target Start/End: Complemental strand, 28205104 - 28205047
Alignment:
Q  112 ttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcata 169  Q
    ||||||| |||||| |||||||  || |||||||||||||||||||  ||||||||||    
T  28205104 ttttatgaaataaaaagctattaattaatatttatattttagaaaacatcatttcata 28205047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 67 - 171
Target Start/End: Original strand, 31236619 - 31236724
Alignment:
Q  67 gtgtaccggtactcctacttca-aaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 165  Q
    |||||||||||||| |  |||| ||||| | ||||||||  || | ||| ||| |||||| || |||||||  |||||||||||||||||||  ||||||    
T  31236619 gtgtaccggtactcttgtttcacaaaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcattt 31236718  T
Q  166 cataag 171  Q
    ||||||    
T  31236719 cataag 31236724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 59 - 152
Target Start/End: Original strand, 40756565 - 40756657
Alignment:
Q  59 aaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatatttta 152  Q
    ||||| ||||||| |||||||||| ||||||| || |  || ||||| || ||||| ||| ||||||||| ||||| | |||||||||||||||    
T  40756565 aaattgaggtgtatcggtactcctgcttcaaatatttacaatttaaccattatttt-atgaaataaagagttatttatcgatatttatatttta 40756657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 152
Target Start/End: Complemental strand, 3426167 - 3426079
Alignment:
Q  65 aggtgtaccggtactcctacttcaaaaatctttaaattaactataattttt-atggaataaagagctatttgttgatatttatatttta 152  Q
    |||||||||| ||||| | ||||| || | | ||||||||| ||||||||| ||| |||||| | ||||||||  ||||||||||||||    
T  3426167 aggtgtaccgatactcttgcttcataattttataaattaacgataattttttatgtaataaataactatttgtcaatatttatatttta 3426079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 152
Target Start/End: Original strand, 9604460 - 9604548
Alignment:
Q  65 aggtgtaccggtactcctacttcaaaaatctttaaattaactat-aatttttatggaataaagagctatttgttgatatttatatttta 152  Q
    |||||||||||||||||||||||  || | | ||||| ||| || | |||||||| | |||| ||||||||||  ||||||||||||||    
T  9604460 aggtgtaccggtactcctacttcttaattatataaatgaacgatcattttttatgtattaaatagctatttgtcaatatttatatttta 9604548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 165
Target Start/End: Original strand, 17465314 - 17465378
Alignment:
Q  101 ttaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 165  Q
    ||||| || ||||| |||||||||| |||||||| | ||  ||||||||||||||||| ||||||    
T  17465314 ttaacgatcattttcatggaataaatagctatttatcgaattttatattttagaaaatatcattt 17465378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 209
Target Start/End: Original strand, 17465498 - 17465526
Alignment:
Q  181 tcatttcattgtttataaaaatcatacta 209  Q
    |||||||||||||||||||||||||||||    
T  17465498 tcatttcattgtttataaaaatcatacta 17465526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 171
Target Start/End: Complemental strand, 36184129 - 36184008
Alignment:
Q  49 gtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactat-aatttttatggaataaagagctatttgttgatatttata 147  Q
    |||||||| || |||||||||||||| ||| |||| || | |||||  ||||||||| || |||||||||| || |||||  ||| ||| ||  ||||||    
T  36184129 gtacatccttagattaaggtgtaccgatacacctattttataaatcaataaattaacgatcaatttttatgtaacaaaga--tatctgtcgacttttata 36184032  T
Q  148 ttttagaaaatgtcatttcataag 171  Q
    ||||| ||||| | ||||||||||    
T  36184031 ttttaaaaaatattatttcataag 36184008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 110; Significance: 1e-55; HSPs: 80)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 36 - 210
Target Start/End: Complemental strand, 37466089 - 37465916
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttg 135  Q
    |||||||||| ||||||| ||| ||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  37466089 gggaacttctacggtacaaccgcaaattaaggtgtaacggtgctcctacttcaaaaatctttaaattaactattatttttatggaataaaaagctatttg 37465990  T
Q  136 ttgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    ||||||||||||||||||||||||| |||||||||        | ||||||||||||||||||||||||||||||    
T  37465989 ttgatatttatattttagaaaatgttatttcataa-aaaaaaacctcatttcattgtttataaaaatcatactaa 37465916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 36 - 210
Target Start/End: Complemental strand, 17642479 - 17642304
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttg 135  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||| |||||||||||| | |||||||||||| ||||||||| |||||| |||||||||    
T  17642479 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcttacttcaaaaatttataaattaactatcatttttatgaaataaaaagctatttg 17642380  T
Q  136 ttgatatttatattttagaaaatgtcatttcataag-nnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    ||||||||||||||||||||||| ||||||||||||        | ||||||||||||||||||||||||||||||    
T  17642379 ttgatatttatattttagaaaatatcatttcataagaaaaaaaacatcatttcattgtttataaaaatcatactaa 17642304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 35 - 171
Target Start/End: Complemental strand, 529677 - 529541
Alignment:
Q  35 tgggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctattt 134  Q
    ||||||||||| ||||||| ||||||||||| ||||| || ||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||    
T  529677 tgggaacttctacggtacacccgtaaattaaagtgtatcgatactcctacttcaaaaatctttaaattaactattatttttatagaataaagagttattt 529578  T
Q  135 gttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||||||||||||||||||||||||||| |||||    
T  529577 gttgatatttatattttagaaaatgtcattttataag 529541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 59 - 171
Target Start/End: Complemental strand, 16323941 - 16323829
Alignment:
Q  59 aaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaat 158  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16323941 aaattaaggtgtaccgatactcctactttaaaaatctttaaattaactattatttttatggaataaagagctatttgttgatatttatattttagaaaat 16323842  T
Q  159 gtcatttcataag 171  Q
    |||||||||||||    
T  16323841 gtcatttcataag 16323829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 50 - 208
Target Start/End: Original strand, 39347146 - 39347303
Alignment:
Q  50 tacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatatt 149  Q
    |||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  39347146 tacacccgcaaattaaggtgtaccgatactcctacttcaaaaatctttaaattaactattatttttatgaaataaagagctatttgttgatatttatatt 39347245  T
Q  150 ttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatact 208  Q
    |||| |||||||||||||| ||       | ||||||||||||||||||||||||||||    
T  39347246 ttaggaaatgtcatttcattag-aaaaaacatcatttcattgtttataaaaatcatact 39347303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 47 - 210
Target Start/End: Complemental strand, 43049930 - 43049767
Alignment:
Q  47 cggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttat 146  Q
    |||||||||||||||||||||||||||  ||||| |||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  43049930 cggtacatccgtaaattaaggtgtaccaatactcttacttcaaaaatctataaattaactattatttttatgaaataaagagctatttgttgatatttat 43049831  T
Q  147 attttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    |||||||||||| |||||| ||||          ||||||||||||||||||||||||||||||    
T  43049830 attttagaaaatatcattttataaaaaaaatatatcatttcattgtttataaaaatcatactaa 43049767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 81 - 210
Target Start/End: Original strand, 26439568 - 26439697
Alignment:
Q  81 ctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataagnnnnnnncg 180  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||    
T  26439568 ctactttaaaaatctttaaattaactattatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataagaaaaaaacg 26439667  T
Q  181 tcatttcattgtttataaaaatcatactaa 210  Q
    |||||| |||||||||||||||||||||||    
T  26439668 tcatttgattgtttataaaaatcatactaa 26439697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 38 - 210
Target Start/End: Original strand, 43485053 - 43485224
Alignment:
Q  38 gaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgtt 137  Q
    |||||||| ||||||| ||| |||||||||||||||||||||  || ||||||||  |||||||||| ||| ||||||||||||||||| ||||||||||    
T  43485053 gaacttctacggtacacccgcaaattaaggtgtaccggtacttttatttcaaaaaaatttaaattaaatattatttttatggaataaagtgctatttgtt 43485152  T
Q  138 gatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
     |||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||    
T  43485153 aatatttatattttagaaaatgtcatttcataagaaaaaat-atcatttcattgtttataaaaatcatactaa 43485224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 39 - 210
Target Start/End: Complemental strand, 2273412 - 2273241
Alignment:
Q  39 aacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttg 138  Q
    ||||||| ||||||| | | |||||||||||||||||||||| |||||||||||| | |||||||||| | ||||||||| |||||| ||||||||||||    
T  2273412 aacttctacggtacacctgcaaattaaggtgtaccggtactcttacttcaaaaatttataaattaactgtcatttttatgaaataaaaagctatttgttg 2273313  T
Q  139 atatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    |||||| ||||||||||||| |||||| |||||       | ||||||||||||||||||||||||||||||    
T  2273312 atatttgtattttagaaaatatcattttataagaaaaaaacatcatttcattgtttataaaaatcatactaa 2273241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 27 - 167
Target Start/End: Complemental strand, 2732198 - 2732066
Alignment:
Q  27 ttttattttgggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaag 126  Q
    |||||||| ||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||        |||    
T  2732198 ttttatttagggaatttcttcggtacatccgcaaattaaggtgtacctgtactcctacttcaaaaatatttaaattaactattattttt--------aag 2732107  T
Q  127 agctatttgttgatatttatattttagaaaatgtcatttca 167  Q
    || ||||||||||||||||||||||||||||| ||||||||    
T  2732106 aggtatttgttgatatttatattttagaaaatatcatttca 2732066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 33 - 210
Target Start/End: Original strand, 13482906 - 13483080
Alignment:
Q  33 tttgggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctat 132  Q
    ||||| ||||||| ||||||| ||| |||||||||| || || ||||||||||||||||||||||||||||||||| |||||| ||||||||||  ||||    
T  13482906 tttggaaacttctacggtacacccgcaaattaaggtatatcg-tactcctacttcaaaaatctttaaattaactattatttttttggaataaagtactat 13483004  T
Q  133 ttgttgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    ||||||||| | |||||||| ||||||||||||||||||       | |||||| |||||||||||||||||||||||    
T  13483005 ttgttgata-taatattttaaaaaatgtcatttcataag-aaaaaacttcattttattgtttataaaaatcatactaa 13483080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 59 - 171
Target Start/End: Complemental strand, 43921513 - 43921401
Alignment:
Q  59 aaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaat 158  Q
    |||||||| | ||| | ||||| |||||||||||||| || ||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  43921513 aaattaagatatactgatactcttacttcaaaaatctatacattaactatcatttttatgaaataaagagctatttgttgatatttgtattttagaaaat 43921414  T
Q  159 gtcatttcataag 171  Q
     ||||||||||||    
T  43921413 atcatttcataag 43921401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 75 - 170
Target Start/End: Complemental strand, 4475399 - 4475304
Alignment:
Q  75 gtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataa 170  Q
    |||||||||||||||||||||||||||||| ||| || |||||| || |||||||||||  |||||||||||||||||||||||||||||| ||||    
T  4475399 gtactcctacttcaaaaatctttaaattaattattatatttatgaaacaaagagctattaattgatatttatattttagaaaatgtcattttataa 4475304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 50 - 210
Target Start/End: Original strand, 36886176 - 36886335
Alignment:
Q  50 tacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatatt 149  Q
    |||||||| ||| |||| ||||||||||||| || || |||||| | |||||||||||| |||||| || ||||||||||||||||||||||||||||||    
T  36886176 tacatccgcaaaataagatgtaccggtactcttaatttaaaaatatataaattaactatcatttttttgaaataaagagctatttgttgatatttatatt 36886275  T
Q  150 tt-agaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    || | ||||| | |||| |||||       | ||||||||||||||||||||||||||||||    
T  36886276 ttaaaaaaatattattttataag--aaaaacatcatttcattgtttataaaaatcatactaa 36886335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 39 - 171
Target Start/End: Complemental strand, 39029719 - 39029587
Alignment:
Q  39 aacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttg 138  Q
    ||||||| ||||||||| | ||||||| ||||||| ||| || |||||||||| ||| |||||||| | | ||| ||||| ||||||||| | |||||||    
T  39029719 aacttctacggtacatctgcaaattaaagtgtaccagtattcttacttcaaaattctataaattaattgttattattatgaaataaagagttgtttgttg 39029620  T
Q  139 atatttatattttagaaaatgtcatttcataag 171  Q
    |||||||||||||||||||| | ||||||||||    
T  39029619 atatttatattttagaaaatattatttcataag 39029587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 59 - 168
Target Start/End: Original strand, 42444264 - 42444372
Alignment:
Q  59 aaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaat 158  Q
    |||||||||||||||| ||||   | || |||||||| || ||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  42444264 aaattaaggtgtaccg-tactttaattttaaaaatctatatattaactatcatttttatgaaataaagagctatttgttgatatttgtattttagaaaat 42444362  T
Q  159 gtcatttcat 168  Q
     |||||||||    
T  42444363 atcatttcat 42444372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 82 - 152
Target Start/End: Original strand, 19718365 - 19718435
Alignment:
Q  82 tacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatatttta 152  Q
    ||||| |||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  19718365 tactttaaaaatctataaattaactattatttttatgaaataaagagctatttgttgatatttatatttta 19718435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 42 - 171
Target Start/End: Complemental strand, 19725446 - 19725317
Alignment:
Q  42 ttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgata 141  Q
    |||| ||||||| || ||||||||| ||||| |||||  ||| |||| |||||  ||| ||||  |||||||||||| ||||||||| ||||||||||      
T  19725446 ttctacggtacacccttaaattaagatgtacaggtacatctatttcataaatcaataagttaatgataatttttatgtaataaagagatatttgttgact 19725347  T
Q  142 tttatattttagaaaatgtcatttcataag 171  Q
    ||||||||||||||||| | ||||||||||    
T  19725346 tttatattttagaaaatattatttcataag 19725317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 58 - 171
Target Start/End: Original strand, 32718977 - 32719090
Alignment:
Q  58 taaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaa 157  Q
    |||||||||||||||||||||||||| |||| ||||   ||| ||||| || ||||||||| || ||||| |||||||| ||  ||||||||||||||||    
T  32718977 taaattaaggtgtaccggtactcctatttcataaattaataagttaacgatcatttttatgtaaaaaagaactatttgtcgacttttatattttagaaaa 32719076  T
Q  158 tgtcatttcataag 171  Q
    | | ||||||||||    
T  32719077 tattatttcataag 32719090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 48 - 210
Target Start/End: Complemental strand, 43460744 - 43460583
Alignment:
Q  48 ggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttata 147  Q
    |||||| || ||||||||||||||||||||| |||  |||| |||||  |||  |||| || ||||||||| || |||||||||||||| ||  ||||||    
T  43460744 ggtacacccttaaattaaggtgtaccggtacacctgtttcataaatcaataagctaacgatcatttttatgtaaaaaagagctatttgtcgacttttata 43460645  T
Q  148 ttttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    ||||||||||| | ||||||||||         |||||||||||||||||| |||||||||||    
T  43460644 ttttagaaaatattatttcataagaaaaaat-atcatttcattgtttataagaatcatactaa 43460583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 42 - 158
Target Start/End: Original strand, 9178726 - 9178842
Alignment:
Q  42 ttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgata 141  Q
    |||| |||||||||| | |||||||||||| | |||| |||| |||| |||||| ||| ||||| ||||||||||||  |||||||| ||||| | ||      
T  9178726 ttctacggtacatccttcaattaaggtgtatcagtacacctatttcataaatctataagttaacgataatttttatgtgataaagagatatttatcgact 9178825  T
Q  142 tttatattttagaaaat 158  Q
    |||||||||||||||||    
T  9178826 tttatattttagaaaat 9178842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 35 - 167
Target Start/End: Original strand, 36672009 - 36672141
Alignment:
Q  35 tgggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctattt 134  Q
    |||||||||||  ||||||  |||||||| |||||||||||||||| | ||||| |||||| |||| ||||||| | ||||||| |||||| || || |     
T  36672009 tgggaacttctatggtacactcgtaaattgaggtgtaccggtactcttgcttcataaatctataaactaactatcaattttatgaaataaatagttacta 36672108  T
Q  135 gttgatatttatattttagaaaatgtcatttca 167  Q
    || |  |||||||||||||||||| | ||||||    
T  36672109 gtcggcatttatattttagaaaatatgatttca 36672141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 42 - 156
Target Start/End: Original strand, 12107490 - 12107604
Alignment:
Q  42 ttcttcggtacatc-cgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgat 140  Q
    |||| ||||||||| | |||||| ||||||||||||||||||||||||||||| | ||| |||||  | | |||||||  |||||||| ||||| | |||    
T  12107490 ttctacggtacatctcataaattgaggtgtaccggtactcctacttcaaaaatttataacttaacggtta-ttttatgagataaagagttatttatcgat 12107588  T
Q  141 atttatattttagaaa 156  Q
    ||||||||||||||||    
T  12107589 atttatattttagaaa 12107604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 58 - 202
Target Start/End: Complemental strand, 27970394 - 27970253
Alignment:
Q  58 taaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaa 157  Q
    |||||| |||||||||||||||| |||||||||||| | ||| ||||  || ||||| ||| ||||||||| ||||| | ||||||||||||||||||||    
T  27970394 taaattgaggtgtaccggtactc-tacttcaaaaatttataatttaaggattatttt-atgaaataaagagttatttatcgatatttatattttagaaaa 27970297  T
Q  158 tgtcatttcataagnnnnnnncgtcatttcattgtttataaaaat 202  Q
      |||||| |||||       | ||||||||||||||||||||||    
T  27970296 catcattttataag-aaaaaacatcatttcattgtttataaaaat 27970253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 58 - 171
Target Start/End: Complemental strand, 12980397 - 12980284
Alignment:
Q  58 taaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaa 157  Q
    |||| ||||||||| ||| || |||| |||| ||||| |||| ||||| || ||||||||| ||||||||| ||||||| |   ||||||||||||||||    
T  12980397 taaaataaggtgtatcggaacacctatttcataaatcattaagttaacgatcatttttatgtaataaagagatatttgtcggcttttatattttagaaaa 12980298  T
Q  158 tgtcatttcataag 171  Q
    | | ||||||||||    
T  12980297 tattatttcataag 12980284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 42 - 171
Target Start/End: Original strand, 36496151 - 36496280
Alignment:
Q  42 ttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgata 141  Q
    |||| ||||| |||| || |||||||||||||||||| |||| |||| || ||  ||| ||||| || ||||||||| ||||||||| | | | ||||      
T  36496151 ttctacggtatatccttagattaaggtgtaccggtacacctatttcataattcaataagttaacaatcatttttatgtaataaagagatgtctattgact 36496250  T
Q  142 tttatattttagaaaatgtcatttcataag 171  Q
    ||||||||||| ||||| ||||||||||||    
T  36496251 tttatattttaaaaaatatcatttcataag 36496280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 80
Target Start/End: Complemental strand, 37511495 - 37511451
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactc 80  Q
    |||||||||| ||||||||||||||||||||||||||||||||||    
T  37511495 gggaacttctacggtacatccgtaaattaaggtgtaccggtactc 37511451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 36 - 171
Target Start/End: Complemental strand, 17792610 - 17792475
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttg 135  Q
    ||||||||||  ||||||  | |||||||||||||| |||||||||| ||||  |||| | || |||||| || | ||||||| |||||| || ||||||    
T  17792610 gggaacttctatggtacactcataaattaaggtgtatcggtactcctgcttcctaaatttatacattaacaatcaattttatgaaataaatagttatttg 17792511  T
Q  136 ttgatatttatattttagaaaatgtcatttcataag 171  Q
    | |  |||||||| | ||||||| ||||||||||||    
T  17792510 tcggcatttatatctcagaaaatatcatttcataag 17792475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 36 - 171
Target Start/End: Complemental strand, 31158960 - 31158825
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttg 135  Q
    |||||||||| |||||||  || ||||| ||||||| | |||||| | ||||  |||||| ||||||||| || | ||||||| |||||| || ||||||    
T  31158960 gggaacttctacggtacactcgcaaattgaggtgtatcagtactcttgcttcctaaatctataaattaacgattaattttatgaaataaatagttatttg 31158861  T
Q  136 ttgatatttatattttagaaaatgtcatttcataag 171  Q
      |  |||||||||||| ||||| ||||||||||||    
T  31158860 ccggcatttatattttaaaaaatatcatttcataag 31158825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 42 - 202
Target Start/End: Original strand, 35754465 - 35754622
Alignment:
Q  42 ttcttcggtacatc-cgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgat 140  Q
    |||| ||||||||| | |||||||||||||| ||||||||||||||||||||| ||  | ||||| || | ||||||| ||||||||| ||||| |  ||    
T  35754465 ttctacggtacatctcataaattaaggtgtatcggtactcctacttcaaaaat-ttatatttaacgatta-ttttatgaaataaagagttatttataaat 35754562  T
Q  141 atttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaat 202  Q
    ||||||||||||||| |  |||||| |||||       | ||||||||||||||||||||||    
T  35754563 atttatattttagaacacatcattttataag--aaaaacatcatttcattgtttataaaaat 35754622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 60 - 158
Target Start/End: Complemental strand, 2165135 - 2165037
Alignment:
Q  60 aattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaat 158  Q
    |||||||||||||| |||| |||| |||| |||| | ||| ||||| ||||||||||||  |||||||| ||||| | ||  |||||||||||||||||    
T  2165135 aattaaggtgtaccagtacacctatttcataaatttataagttaacgataatttttatgtgataaagagatatttatcgacttttatattttagaaaat 2165037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 97 - 171
Target Start/End: Complemental strand, 3053144 - 3053070
Alignment:
Q  97 taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||||| || ||||||||| |||||| || |||||||  ||||||||||||||||||| ||||| |||||||    
T  3053144 taaattaacgatcatttttatgaaataaaaagttatttgtcaatatttatattttagaaaacgtcatatcataag 3053070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 35 - 152
Target Start/End: Original strand, 29454142 - 29454260
Alignment:
Q  35 tgggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactat-aatttttatggaataaagagctatt 133  Q
    ||||||||||| |||||||  |  ||| |||||||||||||||||||| ||||| || | | ||||||||| || | |||||||| |||||| | |||||    
T  29454142 tgggaacttctacggtacactcacaaagtaaggtgtaccggtactcctgcttcataattttataaattaacgatcattttttatgtaataaataactatt 29454241  T
Q  134 tgttgatatttatatttta 152  Q
    |||  ||||||||||||||    
T  29454242 tgtcaatatttatatttta 29454260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 171
Target Start/End: Complemental strand, 3643006 - 3642945
Alignment:
Q  110 atttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||||| ||||||||| ||||||||||  ||||||||||||||||| | ||||||||||    
T  3643006 atttttatgtaataaagagatatttgttgacttttatattttagaaaatattatttcataag 3642945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 170
Target Start/End: Original strand, 18844221 - 18844294
Alignment:
Q  97 taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataa 170  Q
    |||| |||| || ||||||||| |||||| ||||||||||  |||||||||||||||||||  |||||||||||    
T  18844221 taaaataacgatcatttttatgaaataaaaagctatttgtcaatatttatattttagaaaacatcatttcataa 18844294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 171
Target Start/End: Original strand, 27100886 - 27100947
Alignment:
Q  110 atttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||||| |||||| ||||||||||  |||||||||||||||||||  ||||||||||||    
T  27100886 atttttatgaaataaaaagctatttgtcaatatttatattttagaaaacatcatttcataag 27100947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 171
Target Start/End: Complemental strand, 27172298 - 27172185
Alignment:
Q  58 taaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaa 157  Q
    |||||||||||||| |||||||||| ||||  |||| | || |||||| || | ||||||| |||||| || ||||||| |  |||||||| | ||||||    
T  27172298 taaattaaggtgtatcggtactcctgcttcctaaatttatacattaacaatcaattttatgaaataaatagttatttgtcggcatttatatctcagaaaa 27172199  T
Q  158 tgtcatttcataag 171  Q
    | ||||||||||||    
T  27172198 tatcatttcataag 27172185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 171
Target Start/End: Original strand, 29039676 - 29039749
Alignment:
Q  98 aaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    |||||||| || ||||||||| |||||| || |||||||  ||||||||||||||||||| ||||| |||||||    
T  29039676 aaattaacgatcatttttatgaaataaaaagttatttgtcaatatttatattttagaaaacgtcatatcataag 29039749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 210
Target Start/End: Complemental strand, 34332517 - 34332344
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactat-aatttttatggaataaagagctattt 134  Q
    |||||||||| ||||||| ||| ||||||||||||||||||||||   ||| | |  | | |||||||||||| | |||||||| || ||| || | |||    
T  34332517 gggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtgttt 34332419  T
Q  135 gttgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    ||||| || ||||||||||||||| |||||| |||||       | |||||||||| |||| ||||||||||||||    
T  34332418 gttgacatatatattttagaaaatatcattttataag-aaaaaacatcatttcattttttagaaaaatcatactaa 34332344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 65 - 152
Target Start/End: Complemental strand, 2261391 - 2261303
Alignment:
Q  65 aggtgtaccggtactcctacttcaaaaatctttaaattaactataattttt-atggaataaagagctatttgttgatatttatatttta 152  Q
    |||||||||||||||||| ||||| || | | ||||||||| || |||||| ||| |||||| ||||||||||  ||||||||||||||    
T  2261391 aggtgtaccggtactcctgcttcataattttgtaaattaacgatcattttttatgtaataaatagctatttgtcaatatttatatttta 2261303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 167
Target Start/End: Complemental strand, 6631508 - 6631388
Alignment:
Q  47 cggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttat 146  Q
    |||||||  |||||||| ||||||| |||||||| | ||||| |||||| |||| |||| || | ||||||| |||||  || ||||||| |  ||||||    
T  6631508 cggtacactcgtaaattgaggtgtatcggtactcttgcttcataaatctataaactaacgatcaattttatgaaataattagttatttgtcggcatttat 6631409  T
Q  147 attttagaaaatgtcatttca 167  Q
    |||||||||||| | ||||||    
T  6631408 attttagaaaatatgatttca 6631388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 210
Target Start/End: Original strand, 6799842 - 6799946
Alignment:
Q  105 ctataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatca 204  Q
    |||| ||||| ||| ||||||||||||||| ||||||||| |||||||||| ||  ||||| |||||       | |||| |||||||||||||||||||    
T  6799842 ctatcattttaatgaaataaagagctatttcttgatatttgtattttagaatataccattttataag-aaaaaacatcatatcattgtttataaaaatca 6799940  T
Q  205 tactaa 210  Q
    ||||||    
T  6799941 tactaa 6799946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 86
Target Start/End: Original strand, 26439509 - 26439559
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctactt 86  Q
    |||||||||| ||||||||||  ||||||||||||| ||||||||||||||    
T  26439509 gggaacttctacggtacatccacaaattaaggtgtatcggtactcctactt 26439559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 67 - 210
Target Start/End: Complemental strand, 36835718 - 36835575
Alignment:
Q  67 gtgtaccggtactcctacttca-aaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 165  Q
    |||||||||||||| |  |||| ||||| | ||||||||| || | ||| ||| |||||| || |||||||  |||||||||||||||||||  ||||||    
T  36835718 gtgtaccggtactcttgtttcacaaaatatataaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcattt 36835619  T
Q  166 cataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    ||||||       | ||||||||||||||||||  ||||||||||    
T  36835618 cataag-aaaaatcatcatttcattgtttataaggatcatactaa 36835575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 97 - 167
Target Start/End: Complemental strand, 38803779 - 38803709
Alignment:
Q  97 taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttca 167  Q
    ||||||||| || | ||||||| |||||| ||||||||||  |||||||||||||||||||  ||||||||    
T  38803779 taaattaacgatcacttttatgaaataaaaagctatttgtcaatatttatattttagaaaacatcatttca 38803709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 210
Target Start/End: Complemental strand, 946377 - 946201
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataa---tttttatggaataaagagctat 132  Q
    |||||||||| ||||||| ||| |||||| |||||||||||||||  ||||  ||  | | |||||||||||| |   |||||||| |  ||| |  | |    
T  946377 gggaacttctacggtacacccgcaaattacggtgtaccggtactctcacttacaatttttataaattaactatcattttttttatgaagaaaataagtgt 946278  T
Q  133 ttgttgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    ||||||| || ||||||||||||||| |||||| |||||       | |||||||||| |||||||||||||||||||    
T  946277 ttgttgacatatatattttagaaaatatcattttataag-aaaaaacatcatttcattttttataaaaatcatactaa 946201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 171
Target Start/End: Original strand, 24937607 - 24937720
Alignment:
Q  58 taaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaa 157  Q
    ||||||||||||||  ||||||||| ||||  |||| | || |||||| || | ||||||| |||||| || ||||||| |  |||||||| | ||||||    
T  24937607 taaattaaggtgtattggtactcctgcttcttaaatttatacattaacaatcaattttatgaaataaatagttatttgtcggcatttatatctcagaaaa 24937706  T
Q  158 tgtcatttcataag 171  Q
    | ||||||||||||    
T  24937707 tatcatttcataag 24937720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 210
Target Start/End: Complemental strand, 28090596 - 28090423
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactat-aatttttatggaataaagagctattt 134  Q
    |||||||||| ||||||| ||| || |||||||||||||||||||   ||| | |  | | |||||||||||| | |||||||| || ||| || | |||    
T  28090596 gggaacttctacggtacacccgcaatttaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaatagatgttt 28090498  T
Q  135 gttgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    ||||| || ||||||||||||||| |||||| |||||       | |||||||||| |||| ||||||||||||||    
T  28090497 gttgacatatatattttagaaaatatcattttataag-aaaaaacatcatttcattttttagaaaaatcatactaa 28090423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 169
Target Start/End: Complemental strand, 28886012 - 28885955
Alignment:
Q  112 ttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcata 169  Q
    ||||||| |||||| ||||||| ||| |||||||||||||||||||  ||||||||||    
T  28886012 ttttatgaaataaaaagctattagttaatatttatattttagaaaacatcatttcata 28885955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 171
Target Start/End: Original strand, 36274586 - 36274699
Alignment:
Q  58 taaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaa 157  Q
    |||||| |||||||| ||||||| | ||||  |||| | ||||||||| || | ||||||| |||||| || |||| || || |||||||||||||||||    
T  36274586 taaattgaggtgtactggtactcttgcttcctaaatatataaattaacgatcaattttatgaaataaatagttattcgtcgacatttatattttagaaaa 36274685  T
Q  158 tgtcatttcataag 171  Q
    |   ||||||||||    
T  36274686 taagatttcataag 36274699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 152
Target Start/End: Complemental strand, 38210726 - 38210609
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataa-tttttatggaataaagagctattt 134  Q
    |||||||||| |||||||  |||||| |||||||||||| ||||||| ||||  || | | ||||| ||| |||| |||||||| |||||| | ||||||    
T  38210726 gggaacttctacggtacactcgtaaaataaggtgtaccgatactcctgcttcttaattttataaatgaacgataattttttatgtaataaataactattt 38210627  T
Q  135 gttgatatttatatttta 152  Q
     |  ||||||||||||||    
T  38210626 atcaatatttatatttta 38210609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 152
Target Start/End: Original strand, 40776669 - 40776754
Alignment:
Q  68 tgtaccggtactcctacttcaaaaatctttaaattaactataatttt-tatggaataaagagctatttgttgatatttatatttta 152  Q
    ||||||| ||||||| ||||| || | | ||||||||| || ||||| ||||||||||| ||||||||||  ||||||||||||||    
T  40776669 tgtaccgatactcctgcttcataattttataaattaacgatcattttttatggaataaatagctatttgtcaatatttatatttta 40776754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 171
Target Start/End: Original strand, 42164930 - 42165042
Alignment:
Q  58 taaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaa 157  Q
    |||||| |||||||||| ||||| ||||| |||||| | ||| ||||| || ||||| ||| ||||||||  ||||| |  |||||||||||||||||||    
T  42164930 taaattgaggtgtaccgatactcatactttaaaaatttataatttaacgattatttt-atgaaataaagaattatttatcaatatttatattttagaaaa 42165028  T
Q  158 tgtcatttcataag 171  Q
      |||||| |||||    
T  42165029 catcattttataag 42165042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 152
Target Start/End: Original strand, 7128119 - 7128207
Alignment:
Q  65 aggtgtaccggtactcctacttcaaaaatctttaaattaactataattttt-atggaataaagagctatttgttgatatttatatttta 152  Q
    |||||||||| ||||||| ||||  || ||| ||||| ||| ||||||||| ||| | |||| ||||||||||| ||||||||||||||    
T  7128119 aggtgtaccgatactcctgcttcttaattctataaatgaacgataattttttatgtagtaaatagctatttgttaatatttatatttta 7128207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 171
Target Start/End: Original strand, 31893357 - 31893468
Alignment:
Q  59 aaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaat 158  Q
    ||||| |||||||||| |||||||  ||||||||| | ||| ||||| || ||||| ||| ||||||||| ||||| |  |||||||||||||| ||||     
T  31893357 aaattgaggtgtaccgatactcctgtttcaaaaatttataatttaacgatcatttt-atgaaataaagagttatttatcaatatttatattttataaaac 31893455  T
Q  159 gtcatttcataag 171  Q
     |||||| |||||    
T  31893456 atcattttataag 31893468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 151
Target Start/End: Original strand, 34047444 - 34047531
Alignment:
Q  63 taaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatatttt 151  Q
    ||||||||||||||||| ||||||||||||| | ||| ||||| || | ||||||  |||||| || ||||| || |||||||||||||    
T  34047444 taaggtgtaccggtacttctacttcaaaaatttataatttaacgatta-ttttataaaataaaaagttatttattaatatttatatttt 34047531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 39170998 - 39171042
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactc 80  Q
    |||||||||| ||||||| ||| ||||||||||||||||||||||    
T  39170998 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 39171042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 171
Target Start/End: Original strand, 196151 - 196202
Alignment:
Q  120 aataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    |||||| || |||||||| |||||||||||||||||||  ||||||||||||    
T  196151 aataaaaaggtatttgttaatatttatattttagaaaacatcatttcataag 196202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 171
Target Start/End: Original strand, 310988 - 311039
Alignment:
Q  120 aataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    |||||| || |||||||| |||||||||||||||||||  ||||||||||||    
T  310988 aataaaaaggtatttgttaatatttatattttagaaaacatcatttcataag 311039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 80
Target Start/End: Complemental strand, 23286970 - 23286927
Alignment:
Q  37 ggaacttcttcggtacatccgtaaattaaggtgtaccggtactc 80  Q
    ||||||||| ||||||| ||| ||||||||||||||||||||||    
T  23286970 ggaacttctacggtacacccgcaaattaaggtgtaccggtactc 23286927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 171
Target Start/End: Original strand, 1426389 - 1426463
Alignment:
Q  97 taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||||| || | ||| ||| |||||| || |||||||  |||||||||||||||||||  ||||||||||||    
T  1426389 taaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataag 1426463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 171
Target Start/End: Original strand, 12266133 - 12266207
Alignment:
Q  97 taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||||| || | ||| ||| |||||| || |||||||  |||||||||||||||||||  ||||||||||||    
T  12266133 taaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataag 12266207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 158
Target Start/End: Complemental strand, 24377688 - 24377586
Alignment:
Q  56 cgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaa 155  Q
    |||||||| |||||||||||||||| | ||||| |||| | |||| || | || | ||||||| |||||| || ||||| | |  |||||||||||||||    
T  24377688 cgtaaattgaggtgtaccggtactcttgcttcataaatttataaactagcaatcaattttatgaaataaatagttatttatcggcatttatattttagaa 24377589  T
Q  156 aat 158  Q
    |||    
T  24377588 aat 24377586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 210
Target Start/End: Complemental strand, 29460041 - 29459866
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactat-aatttttatggaa-taaagagctatt 133  Q
    |||||||||| ||||||| | | ||||||||||||||||||||||   |||  ||  | | |||||||||||| | |||||||| ||  ||| || | ||    
T  29460041 gggaacttctacggtacacctgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaataggtgtt 29459942  T
Q  134 tgttgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    |||||| || ||||||||||||||| |||||| |||||       | |||||||||| |||| ||||||||||||||    
T  29459941 tgttgacatatatattttagaaaatatcattttataag-aaaaaacatcatttcattttttagaaaaatcatactaa 29459866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 171
Target Start/End: Complemental strand, 32238280 - 32238207
Alignment:
Q  97 taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||||| || ||||||||| |||||| || ||||||| ||  ||||||||||| ||||| ||||||||||||    
T  32238280 taaattaacgatcatttttatgaaataaa-agttatttgtcgacttttatattttaaaaaatatcatttcataag 32238207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 171
Target Start/End: Original strand, 45393508 - 45393582
Alignment:
Q  97 taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    |||||||| ||| | ||| ||| |||||| || |||||||  |||||||||||||||||||  ||||||||||||    
T  45393508 taaattaaatatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataag 45393582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 158
Target Start/End: Original strand, 4471509 - 4471566
Alignment:
Q  101 ttaactataatttttatggaataaagagctatttgttgatatttatattttagaaaat 158  Q
    ||||| || ||||||||| || |||||||||||||| ||  |||||||||||||||||    
T  4471509 ttaacgatcatttttatgtaacaaagagctatttgtcgacttttatattttagaaaat 4471566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 110 - 171
Target Start/End: Complemental strand, 12180253 - 12180192
Alignment:
Q  110 atttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||||| | |||||| || |||||||  |||||||||||||||| | ||||||||||||    
T  12180253 atttttatgaagtaaagaactctttgttggcatttatattttagaaagtatcatttcataag 12180192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 110 - 171
Target Start/End: Complemental strand, 12424681 - 12424620
Alignment:
Q  110 atttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||||| | |||||| || |||||||  |||||||||||||||| | ||||||||||||    
T  12424681 atttttatgaagtaaagaactctttgttggcatttatattttagaaagtatcatttcataag 12424620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 112 - 169
Target Start/End: Complemental strand, 12801436 - 12801379
Alignment:
Q  112 ttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcata 169  Q
    ||||||| |||||| ||||||| ||  |||||||||||||||||||  ||||||||||    
T  12801436 ttttatgaaataaaaagctattagtcaatatttatattttagaaaacatcatttcata 12801379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 19718462 - 19718491
Alignment:
Q  181 tcatttcattgtttataaaaatcatactaa 210  Q
    ||||||||||||||||||||||||||||||    
T  19718462 tcatttcattgtttataaaaatcatactaa 19718491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 59 - 206
Target Start/End: Original strand, 38764762 - 38764907
Alignment:
Q  59 aaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaat 158  Q
    ||||| ||||||| |||||||||| ||||||| || |  || ||||| || ||||| ||| ||||||||| ||||| |  |||||||||||||| || ||    
T  38764762 aaattgaggtgtatcggtactcctgcttcaaatatttacaatttaacgattatttt-atgaaataaagagttatttatcaatatttatattttataatat 38764860  T
Q  159 gtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcata 206  Q
     |||||| |||||       | |||||||||||||||||| |||||||    
T  38764861 atcattttataag-aataaacatcatttcattgtttataagaatcata 38764907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 170
Target Start/End: Original strand, 40547720 - 40547824
Alignment:
Q  65 aggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatt 164  Q
    |||||||||||||||| ||||||| ||||   ||||||||| || | ||||||| |||||| | |||||| |  || ||||||||||||||||  ||||     
T  40547720 aggtgtaccggtactcttacttcataaattgataaattaacaatta-ttttatgaaataaaaatctatttatcaatgtttatattttagaaaacatcatc 40547818  T
Q  165 tcataa 170  Q
    ||||||    
T  40547819 tcataa 40547824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 98 - 171
Target Start/End: Original strand, 41571782 - 41571855
Alignment:
Q  98 aaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    |||||||| || ||||||||  |||||| |  |||||||| ||||||||||||||||||| ||| | |||||||    
T  41571782 aaattaacgatcatttttataaaataaaaatttatttgttaatatttatattttagaaaacgtcgtatcataag 41571855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 42444364 - 42444393
Alignment:
Q  181 tcatttcattgtttataaaaatcatactaa 210  Q
    ||||||||||||||||||||||||||||||    
T  42444364 tcatttcattgtttataaaaatcatactaa 42444393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 210
Target Start/End: Complemental strand, 44935304 - 44935131
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactat-aatttttatggaataaagagctattt 134  Q
    |||||||||| ||||||| ||| || |||||||||||||||||| ||   | | |  | | |||||||||||| | |||||||| || ||| || | |||    
T  44935304 gggaacttctacggtacacccgcaatttaaggtgtaccggtact-ctcggttacatttttataaattaactatcattttttatgaaagaaataggtgttt 44935206  T
Q  135 gttgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    ||||| || ||||||||||||||| |||||| |||||       | |||||||||| |||| ||||||||||||||    
T  44935205 gttgacatatatattttagaaaatatcattttataag-aaaaaacatcatttcattttttacaaaaatcatactaa 44935131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 152
Target Start/End: Complemental strand, 118187 - 118099
Alignment:
Q  65 aggtgtaccggtactcctacttcaaaaatctttaaattaactataattttt-atggaataaagagctatttgttgatatttatatttta 152  Q
    |||||||||||||||||| ||||  || ||| ||||| ||| || |||||| ||| | |||| ||||||||||  ||||||||||||||    
T  118187 aggtgtaccggtactcctgcttcttaattctataaatgaacgatcattttttatgtagtaaatagctatttgtcaatatttatatttta 118099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 29229176 - 29229220
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactc 80  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||    
T  29229176 gggatcttctacggtacacccgtaaattacggtgtaccggtactc 29229220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 152
Target Start/End: Original strand, 37675966 - 37676054
Alignment:
Q  65 aggtgtaccggtactcctacttcaaaaatctttaaattaactat-aatttttatggaataaagagctatttgttgatatttatatttta 152  Q
    |||||||||||||||||||||||  || | | ||||| ||| || | |||||||| | |||| ||||||||||  ||||||||||||||    
T  37675966 aggtgtaccggtactcctacttcttaattatataaatgaacgatcattttttatgtattaaatagctatttgtcaatatttatatttta 37676054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 165
Target Start/End: Complemental strand, 38502535 - 38502467
Alignment:
Q  97 taaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 165  Q
    |||||||||||| ||||||||| |  ||| || | |||||||| || ||||||||||||||| ||||||    
T  38502535 taaattaactatcatttttatgaagaaaataggtgtttgttgacatatatattttagaaaatatcattt 38502467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0625 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold0625
Description:

Target: scaffold0625; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 36 - 210
Target Start/End: Original strand, 6266 - 6439
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttg 135  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||  | |||||| |||||||||||||||||    
T  6266 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctactttaaaaatctttaaattaactagtacttttatagaataaagagctatttg 6365  T
Q  136 ttgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    |||||||||||||||||| |||||||||||| ||||       | | ||||||||||||||||| ||||||||||    
T  6366 ttgatatttatattttaggaaatgtcatttcttaag-aaaaaacattatttcattgtttataaacatcatactaa 6439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 56 - 171
Target Start/End: Complemental strand, 45459 - 45344
Alignment:
Q  56 cgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaa 155  Q
    ||||||||| ||||||||||||||| |||||   |||||| ||||||||| || | ||||||| |||||| || ||||||| |  |||||||||| ||||    
T  45459 cgtaaattatggtgtaccggtactcttacttactaaatctataaattaacgatcaattttatgaaataaatagttatttgtcggcatttatatttcagaa 45360  T
Q  156 aatgtcatttcataag 171  Q
    ||  ||||||||||||    
T  45359 aacatcatttcataag 45344  T

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Target: scaffold0008; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 158
Target Start/End: Original strand, 262831 - 262947
Alignment:
Q  42 ttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgata 141  Q
    |||| ||||||| || | |||||||||||| |||||| |||| |||| |||||| |||  |||  ||||||||||||  |||||||| ||||| | ||      
T  262831 ttctacggtacacccttcaattaaggtgtatcggtacacctatttcataaatctataaggtaaagataatttttatgtgataaagagatatttatcgact 262930  T
Q  142 tttatattttagaaaat 158  Q
    |||||||||||||||||    
T  262931 tttatattttagaaaat 262947  T

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Target: scaffold0667 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0667
Description:

Target: scaffold0667; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 170
Target Start/End: Complemental strand, 242 - 104
Alignment:
Q  33 tttgggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataattttt-atggaataaagagcta 131  Q
    ||||||||||||| |||||||  |  ||| | ||||||||||||||| || ||||| || | | ||||||||| || |||||| ||| |||||| |||||    
T  242 tttgggaacttctacggtacactcacaaagtgaggtgtaccggtacttctgcttcataattttataaattaacgatcattttttatgtaataaatagcta 143  T
Q  132 tttgttgatatttatattttagaaaatgtcatttcataa 170  Q
    |||||  |||||||||||||| | ||  |||||||||||    
T  142 tttgtcaatatttatattttatataacatcatttcataa 104  T

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Target: scaffold0460 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 156
Target Start/End: Original strand, 8632 - 8678
Alignment:
Q  110 atttttatggaataaagagctatttgttgatatttatattttagaaa 156  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||    
T  8632 atttttatgaaataaagagttatttgttgatatttatattttagaaa 8678  T

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Target: scaffold0060 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 171
Target Start/End: Complemental strand, 46094 - 46033
Alignment:
Q  110 atttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 171  Q
    ||||||||| ||||||||||||||| | | ||| ||||||||||||||| ||||||||||||    
T  46094 atttttatgaaataaagagctatttatcggtatctatattttagaaaatatcatttcataag 46033  T

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Target: scaffold0059 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 158
Target Start/End: Original strand, 70700 - 70816
Alignment:
Q  42 ttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgata 141  Q
    |||| ||||||| || | |||||||||||| | |||| |||| |||| |||||| ||| ||||||||||||||||||  |||||  | ||||| | ||      
T  70700 ttctacggtacacccttcaattaaggtgtatcagtacacctatttcataaatctataagttaactataatttttatgtgataaacggatatttatcgact 70799  T
Q  142 tttatattttagaaaat 158  Q
    |||||||||||||||||    
T  70800 tttatattttagaaaat 70816  T

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Target: scaffold0174 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 170
Target Start/End: Complemental strand, 32930 - 32799
Alignment:
Q  39 aacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttg 138  Q
    ||||||| |||||||  |||||| |  ||||||||||||||| |||||   |||||| ||||||||| ||   |||||||  ||||| || ||||||  |    
T  32930 aacttctacggtacactcgtaaactgtggtgtaccggtactcttactttctaaatctataaattaacgatctattttatgagataaatagttatttggcg 32831  T
Q  139 atatttatattttagaaaatgtcatttcataa 170  Q
      |||||||||||||||||| |||||||||||    
T  32830 gcatttatattttagaaaatatcatttcataa 32799  T

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Target: scaffold0077 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 210
Target Start/End: Complemental strand, 48415 - 48242
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactat-aatttttatggaataaagagctattt 134  Q
    |||||||||| ||||||| ||| || |||||||||||||||||||   ||| | |  | | |||||||||||| | |||||||| || ||| || | |||    
T  48415 gggaacttctacggtacacccgcaatttaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtgttt 48317  T
Q  135 gttgatatttatattttagaaaatgtcatttcataagnnnnnnncgtcatttcattgtttataaaaatcatactaa 210  Q
    ||||| || ||||||||||||||| |||||| |||||       | |||||||||| |||| ||||||||||||||    
T  48316 gttgacatatatattttagaaaatatcattttataag-aaaaaacatcatttcattttttagaaaaatcatactaa 48242  T

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Target: scaffold0077; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 80
Target Start/End: Complemental strand, 58170 - 58126
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactc 80  Q
    |||||||||| ||||||| ||| || |||||||||||||||||||    
T  58170 gggaacttctacggtacacccgcaatttaaggtgtaccggtactc 58126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 158
Target Start/End: Original strand, 5704 - 5820
Alignment:
Q  42 ttcttcggtacatccgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataatttttatggaataaagagctatttgttgata 141  Q
    |||| |||||||||| | |||||||||||||| |||| |||| || | |||||| ||| ||||  ||||||||||||  |||||  | ||||| | ||      
T  5704 ttctacggtacatccttcaattaaggtgtaccagtacacctattttataaatctataagttaaagataatttttatgtgataaactgatatttatcgact 5803  T
Q  142 tttatattttagaaaat 158  Q
    |||||||||||||||||    
T  5804 tttatattttagaaaat 5820  T

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Target: scaffold0194 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 170
Target Start/End: Original strand, 17582 - 17632
Alignment:
Q  120 aataaagagctatttgttgatatttatattttagaaaatgtcatttcataa 170  Q
    |||||| || ||||||| ||||||||||||||||||||  |||||||||||    
T  17582 aataaaaaggtatttgtcgatatttatattttagaaaacatcatttcataa 17632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0271 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0271
Description:

Target: scaffold0271; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 31 - 115
Target Start/End: Complemental strand, 17072 - 16987
Alignment:
Q  31 attttgggaacttcttcggtacatc-cgtaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactataattttt 115  Q
    ||||||||||||||| ||||||| | |  ||||| |||||||||| ||||||||||||| |||| | | ||||||| || ||||||    
T  17072 attttgggaacttctacggtacacctcacaaattgaggtgtaccgatactcctacttcataaatttatcaattaacgatcattttt 16987  T

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Target: scaffold0022 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 67 - 171
Target Start/End: Original strand, 166450 - 166555
Alignment:
Q  67 gtgtaccggtactcctacttca-aaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 165  Q
    |||||||||||||| |  |||| ||||| | ||||||||  || | ||| ||| |||||| || |||||||  |||||||||||||||||||  ||||||    
T  166450 gtgtaccggtactcttgtttcacaaaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcattt 166549  T
Q  166 cataag 171  Q
    ||||||    
T  166550 cataag 166555  T

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Target: scaffold0493 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0493
Description:

Target: scaffold0493; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 170
Target Start/End: Complemental strand, 1763 - 1659
Alignment:
Q  67 gtgtaccggtactcctacttca-aaaatctttaaattaactataatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 165  Q
    |||||||||||||| |  |||| ||||| | ||||||||  || | ||| ||| |||||| || |||||||  |||||||||||||||||||  ||||||    
T  1763 gtgtaccggtactcttgtttcacaaaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcattt 1664  T
Q  166 cataa 170  Q
    |||||    
T  1663 cataa 1659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0283 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 80
Target Start/End: Complemental strand, 6644 - 6600
Alignment:
Q  36 gggaacttcttcggtacatccgtaaattaaggtgtaccggtactc 80  Q
    |||||||||| ||||||| ||| || |||||||||||||||||||    
T  6644 gggaacttctacggtacacccgcaatttaaggtgtaccggtactc 6600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 149
Target Start/End: Original strand, 271031 - 271083
Alignment:
Q  97 taaattaactataatttttatggaataaagagctatttgttgatatttatatt 149  Q
    ||||||||| || ||||||||| ||||||||| |||||||  |||||||||||    
T  271031 taaattaacgatcatttttatgaaataaagagttatttgtcaatatttatatt 271083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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