View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21006_high_10 (Length: 315)
Name: NF21006_high_10
Description: NF21006
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21006_high_10 |
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Alignment Details
Target: chr7 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 12 - 286
Target Start/End: Original strand, 47916309 - 47916584
Alignment:
| Q |
12 |
tattctagaatttagaagtactcatactttagaggttgtagtcttttaactttggtttaagtatatatttgatctctaactttttcaatttagcaaaaat |
111 |
Q |
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| T |
47916309 |
tattttagaatttagaagtactcatactttagaggttgtagtcttttaactttggtttaaatatatatttgatctctaactttttcaatttagcaaaaat |
47916408 |
T |
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| Q |
112 |
gacaaatgtagtctcttatatttaaccctttttataaaag-nnnnnnnatataagtgtataattgttgaattaaaaaatatacaaaaggaactggcacgt |
210 |
Q |
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| T |
47916409 |
gacaaatgtagtctcttatatttaaccctttttataaaagttttttttatataagtgtataattgttgaattaaaaaatatacaaaaggaactggcacgt |
47916508 |
T |
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| Q |
211 |
atgttctaataaacaagccaaaaacttcatgcaaacaattttccaaannnnnnnnatctactatgaacataaagag |
286 |
Q |
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| T |
47916509 |
atgttctaataaacaagccaaaaacttcatgcaaacaattttccaaaatcttttcatctactatgaacataaagag |
47916584 |
T |
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