View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21006_high_5 (Length: 349)

Name: NF21006_high_5
Description: NF21006
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21006_high_5
NF21006_high_5
[»] chr4 (60 HSPs)
chr4 (12-181)||(1730638-1730808)
chr4 (17-181)||(7250189-7250355)
chr4 (258-349)||(1730885-1730976)
chr4 (51-179)||(38444232-38444362)
chr4 (259-349)||(2073461-2073551)
chr4 (13-181)||(34459218-34459388)
chr4 (16-171)||(33983501-33983657)
chr4 (51-178)||(28928245-28928374)
chr4 (73-181)||(2073273-2073383)
chr4 (54-181)||(42755694-42755823)
chr4 (259-343)||(22313191-22313275)
chr4 (13-168)||(52180361-52180517)
chr4 (274-349)||(2721088-2721163)
chr4 (274-349)||(12185958-12186033)
chr4 (274-349)||(12187951-12188026)
chr4 (274-349)||(25938550-25938625)
chr4 (274-349)||(54932595-54932670)
chr4 (259-349)||(34459466-34459556)
chr4 (12-168)||(29148602-29148759)
chr4 (13-168)||(32655106-32655262)
chr4 (13-168)||(42052854-42053010)
chr4 (49-178)||(12186129-12186260)
chr4 (274-349)||(14576972-14577047)
chr4 (49-178)||(14577144-14577275)
chr4 (274-349)||(21246024-21246099)
chr4 (54-168)||(23147772-23147887)
chr4 (274-349)||(42755526-42755601)
chr4 (259-349)||(7250429-7250519)
chr4 (11-168)||(25938724-25938882)
chr4 (259-349)||(33983322-33983412)
chr4 (13-181)||(38000949-38001119)
chr4 (261-349)||(1757867-1757955)
chr4 (274-322)||(52595757-52595805)
chr4 (274-349)||(2224807-2224882)
chr4 (274-349)||(29148866-29148941)
chr4 (274-349)||(41003508-41003583)
chr4 (274-349)||(42053117-42053192)
chr4 (259-349)||(46030390-46030479)
chr4 (49-178)||(2720858-2720989)
chr4 (54-181)||(3094605-3094734)
chr4 (49-178)||(12188123-12188254)
chr4 (51-181)||(22312993-22313113)
chr4 (259-304)||(28928451-28928496)
chr4 (289-349)||(21076012-21076072)
chr4 (274-349)||(652436-652511)
chr4 (274-349)||(23147590-23147665)
chr4 (274-349)||(32655372-32655447)
chr4 (274-349)||(38000781-38000856)
chr4 (274-349)||(52180627-52180702)
chr4 (274-349)||(54978996-54979071)
chr4 (54-181)||(21246192-21246321)
chr4 (54-180)||(8066312-8066439)
chr4 (65-168)||(54932384-54932488)
chr4 (274-349)||(3387062-3387137)
chr4 (259-310)||(46257980-46258030)
chr4 (13-181)||(652588-652758)
chr4 (71-168)||(52595912-52596010)
chr4 (137-181)||(2224669-2224714)
chr4 (13-94)||(46081172-46081253)
chr4 (12-96)||(53141063-53141147)
[»] chr3 (36 HSPs)
chr3 (12-181)||(25467829-25468000)
chr3 (13-181)||(11672069-11672239)
chr3 (13-171)||(5040653-5040812)
chr3 (259-349)||(39952683-39952773)
chr3 (259-349)||(23298174-23298264)
chr3 (259-349)||(25467661-25467751)
chr3 (22-163)||(39952869-39953004)
chr3 (51-171)||(48080393-48080514)
chr3 (13-171)||(23297926-23298085)
chr3 (49-181)||(19619025-19619159)
chr3 (65-168)||(40564287-40564391)
chr3 (54-168)||(41924323-41924438)
chr3 (49-178)||(50480703-50480834)
chr3 (274-349)||(50480931-50481006)
chr3 (54-178)||(49360294-49360420)
chr3 (54-181)||(39352799-39352928)
chr3 (261-349)||(40564114-40564202)
chr3 (259-306)||(11671944-11671991)
chr3 (270-349)||(22844987-22845066)
chr3 (54-168)||(24987046-24987161)
chr3 (274-349)||(49360126-49360201)
chr3 (259-349)||(5040900-5040990)
chr3 (54-171)||(14418563-14418681)
chr3 (259-349)||(50508718-50508808)
chr3 (54-181)||(46819449-46819578)
chr3 (274-342)||(39352638-39352706)
chr3 (13-168)||(44792236-44792392)
chr3 (274-349)||(6408746-6408821)
chr3 (274-349)||(24987268-24987343)
chr3 (274-349)||(41924141-41924216)
chr3 (259-349)||(48080233-48080315)
chr3 (289-349)||(19618856-19618916)
chr3 (274-349)||(13735496-13735571)
chr3 (259-349)||(12905786-12905876)
chr3 (280-349)||(46819281-46819350)
chr3 (274-322)||(44792499-44792547)
[»] chr2 (34 HSPs)
chr2 (13-167)||(667576-667731)
chr2 (13-181)||(15149826-15149996)
chr2 (13-168)||(4481411-4481567)
chr2 (274-349)||(4592050-4592126)
chr2 (261-349)||(15150071-15150159)
chr2 (13-168)||(25425111-25425267)
chr2 (13-168)||(38620746-38620902)
chr2 (54-171)||(29155672-29155790)
chr2 (54-181)||(3329504-3329633)
chr2 (13-168)||(33867139-33867295)
chr2 (274-349)||(17961311-17961386)
chr2 (274-322)||(38620591-38620639)
chr2 (274-349)||(3329336-3329411)
chr2 (274-349)||(13142429-13142504)
chr2 (274-349)||(33867402-33867477)
chr2 (274-349)||(44070273-44070348)
chr2 (259-349)||(667813-667903)
chr2 (55-168)||(23232090-23232204)
chr2 (12-168)||(13142172-13142329)
chr2 (13-161)||(20937420-20937569)
chr2 (13-168)||(17961056-17961212)
chr2 (277-349)||(38958554-38958626)
chr2 (274-349)||(25424926-25425001)
chr2 (270-349)||(29155493-29155572)
chr2 (54-168)||(31440279-31440394)
chr2 (274-349)||(32422598-32422673)
chr2 (274-349)||(9205347-9205422)
chr2 (274-349)||(23231908-23231983)
chr2 (274-324)||(20937241-20937291)
chr2 (102-168)||(32422426-32422492)
chr2 (284-349)||(31440499-31440564)
chr2 (54-87)||(44070088-44070121)
chr2 (137-181)||(44070131-44070176)
chr2 (289-349)||(4481230-4481290)
[»] chr7 (33 HSPs)
chr7 (13-181)||(33067076-33067246)
chr7 (51-181)||(43224668-43224800)
chr7 (259-349)||(43224500-43224590)
chr7 (13-181)||(42284855-42285025)
chr7 (54-179)||(5022824-5022951)
chr7 (13-171)||(9477917-9478082)
chr7 (54-177)||(35092374-35092499)
chr7 (270-342)||(3551386-3551458)
chr7 (51-162)||(43702042-43702154)
chr7 (54-168)||(39414929-39415044)
chr7 (54-178)||(19805379-19805505)
chr7 (54-181)||(12920633-12920762)
chr7 (13-168)||(31455256-31455412)
chr7 (54-168)||(16567931-16568046)
chr7 (54-168)||(16597616-16597731)
chr7 (274-349)||(39414747-39414822)
chr7 (54-168)||(46181577-46181692)
chr7 (54-171)||(3551176-3551294)
chr7 (259-349)||(33067323-33067413)
chr7 (54-181)||(10065892-10066021)
chr7 (260-349)||(43702259-43702348)
chr7 (274-349)||(5023046-5023121)
chr7 (274-349)||(16567749-16567824)
chr7 (274-349)||(16597838-16597913)
chr7 (274-349)||(46181395-46181470)
chr7 (260-349)||(42284687-42284776)
chr7 (290-349)||(9477828-9477887)
chr7 (274-349)||(27398771-27398846)
chr7 (274-349)||(31455082-31455157)
chr7 (274-322)||(19805236-19805284)
chr7 (274-349)||(35092594-35092669)
chr7 (12-181)||(46783418-46783589)
chr7 (137-181)||(3363311-3363356)
[»] chr6 (25 HSPs)
chr6 (13-171)||(7808117-7808276)
chr6 (259-349)||(6938224-6938314)
chr6 (259-349)||(7807938-7808028)
chr6 (13-168)||(33328953-33329109)
chr6 (13-168)||(33331965-33332121)
chr6 (54-179)||(31071134-31071261)
chr6 (13-181)||(1329158-1329328)
chr6 (13-181)||(20691177-20691347)
chr6 (13-167)||(13532530-13532685)
chr6 (274-349)||(13534039-13534114)
chr6 (270-349)||(28770011-28770090)
chr6 (274-349)||(31070977-31071052)
chr6 (274-349)||(33328771-33328846)
chr6 (274-349)||(33331783-33331858)
chr6 (272-349)||(12429606-12429683)
chr6 (51-130)||(6938426-6938506)
chr6 (274-349)||(31783835-31783911)
chr6 (274-349)||(1329412-1329487)
chr6 (13-171)||(28770145-28770303)
chr6 (289-349)||(29641330-29641390)
chr6 (289-349)||(31511509-31511569)
chr6 (54-159)||(29640399-29640506)
chr6 (270-304)||(31555805-31555839)
chr6 (51-162)||(12429783-12429895)
chr6 (70-165)||(31783656-31783752)
[»] chr5 (23 HSPs)
chr5 (13-171)||(29456145-29456304)
chr5 (13-181)||(7978375-7978545)
chr5 (13-171)||(18595715-18595874)
chr5 (51-171)||(22631878-22631999)
chr5 (51-181)||(14088007-14088139)
chr5 (259-349)||(6224687-6224777)
chr5 (261-349)||(14087839-14087927)
chr5 (13-168)||(14645674-14645830)
chr5 (13-181)||(31149296-31149466)
chr5 (65-179)||(41983580-41983696)
chr5 (259-342)||(29455974-29456057)
chr5 (65-181)||(14088612-14088730)
chr5 (274-349)||(14088444-14088519)
chr5 (274-349)||(15719048-15719123)
chr5 (259-349)||(18595537-18595627)
chr5 (259-349)||(36470342-36470432)
chr5 (259-349)||(7978207-7978298)
chr5 (259-349)||(22632088-22632178)
chr5 (274-349)||(14645492-14645567)
chr5 (263-306)||(31149540-31149583)
chr5 (282-349)||(41983424-41983491)
chr5 (75-181)||(6224503-6224609)
chr5 (284-349)||(41616764-41616829)
[»] chr8 (26 HSPs)
chr8 (13-181)||(25500393-25500563)
chr8 (13-181)||(24891045-24891215)
chr8 (13-171)||(2620557-2620716)
chr8 (54-181)||(25419600-25419729)
chr8 (54-181)||(25427940-25428069)
chr8 (259-349)||(19643356-19643446)
chr8 (51-181)||(6109966-6110098)
chr8 (259-346)||(1667345-1667432)
chr8 (13-181)||(19643111-19643282)
chr8 (15-168)||(24789871-24790025)
chr8 (263-349)||(25419432-25419518)
chr8 (54-180)||(3616505-3616633)
chr8 (51-144)||(2472087-2472181)
chr8 (259-342)||(6109805-6109888)
chr8 (270-349)||(24891283-24891361)
chr8 (259-349)||(2620803-2620893)
chr8 (69-181)||(26560887-26561000)
chr8 (274-349)||(3616727-3616802)
chr8 (54-181)||(30801591-30801720)
chr8 (270-342)||(30801430-30801502)
chr8 (274-349)||(1376364-1376439)
chr8 (13-181)||(1667510-1667668)
chr8 (110-181)||(1376532-1376604)
chr8 (274-349)||(24789689-24789764)
chr8 (270-347)||(26561083-26561160)
chr8 (259-303)||(7057830-7057874)
[»] chr1 (55 HSPs)
chr1 (13-181)||(28221310-28221480)
chr1 (13-181)||(32835106-32835276)
chr1 (13-168)||(25059458-25059614)
chr1 (12-181)||(945823-945994)
chr1 (13-181)||(2978760-2978930)
chr1 (259-349)||(19996518-19996608)
chr1 (13-171)||(19506737-19506896)
chr1 (16-181)||(19996278-19996444)
chr1 (51-170)||(38491776-38491896)
chr1 (54-168)||(424925-425040)
chr1 (259-349)||(28221142-28221232)
chr1 (259-349)||(42068968-42069058)
chr1 (14-162)||(21260345-21260494)
chr1 (54-181)||(35978144-35978273)
chr1 (261-349)||(2978592-2978680)
chr1 (13-168)||(9222600-9222756)
chr1 (13-171)||(2974841-2975000)
chr1 (13-171)||(7842909-7843068)
chr1 (259-342)||(19506566-19506649)
chr1 (274-349)||(27783672-27783747)
chr1 (54-171)||(236869-236987)
chr1 (259-349)||(2975089-2975179)
chr1 (259-349)||(32835353-32835443)
chr1 (262-349)||(7842741-7842825)
chr1 (259-346)||(21260590-21260677)
chr1 (54-168)||(25814968-25815083)
chr1 (274-349)||(29054462-29054537)
chr1 (274-349)||(48964225-48964300)
chr1 (259-349)||(945655-945745)
chr1 (270-347)||(2433389-2433466)
chr1 (12-168)||(13313092-13313249)
chr1 (54-181)||(48964009-48964132)
chr1 (274-349)||(9222418-9222493)
chr1 (270-349)||(13796925-13797004)
chr1 (274-349)||(25815182-25815257)
chr1 (49-178)||(27783846-27783977)
chr1 (274-349)||(35978366-35978441)
chr1 (274-349)||(44327789-44327864)
chr1 (65-181)||(29054251-29054369)
chr1 (54-181)||(44327567-44327696)
chr1 (270-342)||(35659732-35659804)
chr1 (102-181)||(43634221-43634301)
chr1 (259-306)||(25059319-25059366)
chr1 (274-349)||(33794255-33794330)
chr1 (274-349)||(43634363-43634438)
chr1 (54-178)||(42068762-42068888)
chr1 (280-349)||(424746-424815)
chr1 (270-349)||(610885-610964)
chr1 (289-349)||(38491603-38491663)
chr1 (273-340)||(236707-236774)
chr1 (274-349)||(13312910-13312985)
chr1 (54-96)||(34321471-34321513)
chr1 (54-181)||(611064-611193)
chr1 (274-346)||(12560473-12560545)
chr1 (65-116)||(19494807-19494859)
[»] scaffold0312 (2 HSPs)
scaffold0312 (54-168)||(5510-5625)
scaffold0312 (275-349)||(5729-5803)
[»] scaffold0164 (4 HSPs)
scaffold0164 (54-181)||(6747-6876)
scaffold0164 (54-181)||(14628-14757)
scaffold0164 (274-349)||(6969-7044)
scaffold0164 (274-349)||(14850-14925)
[»] scaffold0005 (2 HSPs)
scaffold0005 (49-178)||(240100-240231)
scaffold0005 (274-349)||(240328-240403)


Alignment Details
Target: chr4 (Bit Score: 131; Significance: 6e-68; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 12 - 181
Target Start/End: Original strand, 1730638 - 1730808
Alignment:
Q  12 atagggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggatctgagacgggtccgg 111  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||| |||    
T  1730638 atagggatgacaattgcactcaggctcaatggatatccacataaaatacccacaatgggtagggtaaaaccccgctatcatggatctgagacgggttcgg 1730737  T
Q  112 gtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgcccag-cccgcaaccccgc 181  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  1730738 gtaatacccacgaatttaattggagatgggtacaggtaagagtactatactgcccagccccgcaaccccgc 1730808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 17 - 181
Target Start/End: Original strand, 7250189 - 7250355
Alignment:
Q  17 gatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggatct-gagacgggtccgggtaa 115  Q
    ||||||||||| || |||||  |||| ||| | |||||||||||| | ||||||||||||||||||||||||| |||| ||| | || ||||||||||||    
T  7250189 gatgacaattggacccaggcctaatggatacttacataaaatatctacaatgggtagggtaaaatcccgctataatgggtctggggaagggtccgggtaa 7250288  T
Q  116 tatccacgaatttaattggagatgggtacaggtaagggtactatactgcccagcc-cgcaaccccgc 181  Q
    ||||||| ||||||| |||  ||||| || ||||| ||||||||||||||||||| |||||||||||    
T  7250289 tatccacaaatttaaatgggtatgggcacgggtaaaggtactatactgcccagcctcgcaaccccgc 7250355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 258 - 349
Target Start/End: Original strand, 1730885 - 1730976
Alignment:
Q  258 ggcctaaactagaacctaaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||||||  ||| |||||||||| ||||||||||||||||||||||    
T  1730885 ggcctaaactaaaacctaaaccaaaaaattacttaatacaataacaacttcatcctgctggtgtacagttttttagagatattttggatgtt 1730976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 51 - 179
Target Start/End: Complemental strand, 38444362 - 38444232
Alignment:
Q  51 cataaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgggtaatatccacgaatttaattggagatgggtacaggta 149  Q
    |||||||||||||||||||||||||||||| ||| |||||||   |||| | | |||||||||||||| |||||||||||| |||  |||||||| ||||    
T  38444362 cataaaatatccataatgggtagggtaaaaccccactatcataagtctggggaagggtccgggtaatacccacgaatttaaatgggtatgggtacgggta 38444263  T
Q  150 agggtactatactgcccag-cccgcaacccc 179  Q
    ||||||||||||||||||| |||||||||||    
T  38444262 agggtactatactgcccagccccgcaacccc 38444232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 259 - 349
Target Start/End: Original strand, 2073461 - 2073551
Alignment:
Q  259 gcctaaactagaacctaaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||| |||| | |||||||||| | ||||||||||||||| ||||||    
T  2073461 gcctaaactaaaacctaaaccaaaaaactatttaatacaataacaactccattctaccggtgtacaattttttagagatattttagatgtt 2073551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 13 - 181
Target Start/End: Original strand, 34459218 - 34459388
Alignment:
Q  13 tagggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgg 111  Q
    |||||||| |||||| || ||||  ||||| |||  | ||||||||| ||| ||| ||||||||||||  |||||||||||| | || | ||||||||||    
T  34459218 tagggatggcaattggacccaggtccaatggatacccgcataaaatacccacaattggtagggtaaaacaccgctatcatgggtatggggacgggtccgg 34459317  T
Q  112 gtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgcccag-cccgcaaccccgc 181  Q
    |||||| |||||||||| | |||  ||||| || ||||||||||||||||||||||| |||||||||||||    
T  34459318 gtaatacccacgaattttaatgggtatgggcacgggtaagggtactatactgcccagccccgcaaccccgc 34459388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 16 - 171
Target Start/End: Complemental strand, 33983657 - 33983501
Alignment:
Q  16 ggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggatct-gagacgggtccgggta 114  Q
    ||||| |||||| || ||||| ||||| |||  | ||||||||| | | |||||||||| |||||  |||||||||||||||| | ||||||||||||||    
T  33983657 ggatggcaattggacccaggcccaatggatacccgcataaaatacctacaatgggtaggataaaactccgctatcatggatctagggacgggtccgggta 33983558  T
Q  115 atatccacgaatttaattggagatgggtacaggtaagggtactatactgcccagccc 171  Q
    ||| |||| ||||||| |||  ||| | || ||||||||||||||||||||||||||    
T  33983557 atacccacaaatttaaatgggtatgagcacgggtaagggtactatactgcccagccc 33983501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 51 - 178
Target Start/End: Original strand, 28928245 - 28928374
Alignment:
Q  51 cataaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgggtaatatccacgaatttaattggagatgggtacaggta 149  Q
    ||||||||||||| |||||||||||||||| |||||||| |||| | || | || | ||||||||||| |||||||||||| |||  ||||| || ||||    
T  28928245 cataaaatatccacaatgggtagggtaaaaccccgctattatgggtttggggacagatccgggtaatacccacgaatttaaatgggtatgggcacgggta 28928344  T
Q  150 agggtactatactgcccag-cccgcaaccc 178  Q
    ||||||||||||||| ||| ||||||||||    
T  28928345 agggtactatactgcacagtcccgcaaccc 28928374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 73 - 181
Target Start/End: Original strand, 2073273 - 2073383
Alignment:
Q  73 gggtaaaatcccgctatcatggatct-gagacgggtccgggtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgccca-gcc 170  Q
    |||||||| ||||||||||||| ||| | || |||||||||||||| |||| ||||||| |||  ||||| || |||||||||||||||||||||| |||    
T  2073273 gggtaaaaccccgctatcatgggtctagggaggggtccgggtaatacccacaaatttaaatgggtatgggcacgggtaagggtactatactgcccaggcc 2073372  T
Q  171 cgcaaccccgc 181  Q
    |||||||||||    
T  2073373 cgcaaccccgc 2073383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 54 - 181
Target Start/End: Complemental strand, 42755823 - 42755694
Alignment:
Q  54 aaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgggtaatatccacgaatttaattggagatgggtacaggtaagg 152  Q
    |||||| ||| |||||||||||||||| |||||| | ||||||||| | |||||| ||||||||| |||| || |||| |||  ||||| || |||||||    
T  42755823 aaaatacccacaatgggtagggtaaaaccccgcttttatggatctgggcacgggtacgggtaatacccacaaaattaaatgggtatgggcacgggtaagg 42755724  T
Q  153 gtactatactgcccag-cccgcaaccccgc 181  Q
    ||| |||||||||||| |||||||||||||    
T  42755723 gtattatactgcccagacccgcaaccccgc 42755694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 259 - 343
Target Start/End: Original strand, 22313191 - 22313275
Alignment:
Q  259 gcctaaactagaacctaaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttg 343  Q
    |||||||||| ||| |||||||| ||||||||| ||||| |||||||| |||| |||||||||||| | ||||||||||||||||    
T  22313191 gcctaaactaaaacataaaccaataaactacttgatacagtaacaactccattctgccggtgtacaattttttagagatattttg 22313275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 52180361 - 52180517
Alignment:
Q  13 tagggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgg 111  Q
    ||||||||||||||| || ||| | ||||| |||  | || |||||| ||| |||||||||||||||| |||||| | ||||||||| | | |||| |||    
T  52180361 tagggatgacaattggacccagacccaatggatacccgcaaaaaatacccacaatgggtagggtaaaaccccgcttttatggatctgggcatgggtacgg 52180460  T
Q  112 gtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgcccag 168  Q
    |||||| |||| || |||| |||  ||||| || |||||||||||||||||||||||    
T  52180461 gtaatacccacaaaattaaatgggtatgggcacgggtaagggtactatactgcccag 52180517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 274 - 349
Target Start/End: Original strand, 2721088 - 2721163
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| |||| |||||||||||||||||| ||||||||||||||| | | |||||| |||||||||||||||    
T  2721088 taaaccaaacaactgcttaatacaataacaactccattatgccggtgtataattttttagggatattttggatgtt 2721163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 274 - 349
Target Start/End: Complemental strand, 12186033 - 12185958
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| |||| |||||||||||||||||| ||||||||||||||| | | |||||| |||||||||||||||    
T  12186033 taaaccaaacaactgcttaatacaataacaactccattatgccggtgtataattttttagggatattttggatgtt 12185958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 274 - 349
Target Start/End: Complemental strand, 12188026 - 12187951
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| |||| |||||||||||||||||| ||||||||||||||| | | |||||| |||||||||||||||    
T  12188026 taaaccaaacaactgcttaatacaataacaactccattatgccggtgtataattttttagggatattttggatgtt 12187951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 274 - 349
Target Start/End: Complemental strand, 25938625 - 25938550
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||| | | ||||||| |||||| |||||||    
T  25938625 taaaccaaaaaactacttaatacaataacaactccatcatgccggtgtataattttttagaaatatttcggatgtt 25938550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 274 - 349
Target Start/End: Original strand, 54932595 - 54932670
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| |||| |||||||||||||||||||||| ||||||||||| | | |||||| |||||||||||||||    
T  54932595 taaaccaaacaactgcttaatacaataacaacttcatcatgccggtgtataattttttagggatattttggatgtt 54932670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 259 - 349
Target Start/End: Original strand, 34459466 - 34459556
Alignment:
Q  259 gcctaaactagaacctaaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    |||||||||| |||||||||||||||||  ||||||| |||||||||| |||  ||| |||||||| | ||||||||||||||| ||||||    
T  34459466 gcctaaactaaaacctaaaccaaaaaacagcttaatataataacaactccatcctgctggtgtacaatattttagagatatttttgatgtt 34459556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 168
Target Start/End: Original strand, 29148602 - 29148759
Alignment:
Q  12 atagggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccg 110  Q
    ||||||||| |||||| || ||| | ||||| |||  | || |||||| ||| |||||||||||||||| |||||| | |||| |||| | |||||| ||    
T  29148602 atagggatggcaattggacccagacccaatggatacccgcaaaaaatacccacaatgggtagggtaaaaccccgcttttatgggtctgggcacgggtacg 29148701  T
Q  111 ggtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgcccag 168  Q
    ||||||| |||| || |||| |||  ||||| || |||||||||||||||||||||||    
T  29148702 ggtaatacccacaaaattaaatgggtatgggcacgggtaagggtactatactgcccag 29148759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 32655106 - 32655262
Alignment:
Q  13 tagggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgg 111  Q
    |||||||| |||||| || ||| | ||||| |||  | || |||||| ||| ||||| |||||||||| |||||| | ||||||||| | |||||| |||    
T  32655106 tagggatggcaattggacccagacccaatggatacccgcaaaaaatacccacaatggatagggtaaaaccccgcttttatggatctgggcacgggtacgg 32655205  T
Q  112 gtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgcccag 168  Q
    |||||| |||| || |||| |||  ||||| || |||||||||||||||||||||||    
T  32655206 gtaatacccacaaaattaaatgggtatgggcacgggtaagggtactatactgcccag 32655262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 42052854 - 42053010
Alignment:
Q  13 tagggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgg 111  Q
    |||||||| |||||| || ||| | ||||| |||  | || |||||| ||| |||||||||||||||| |||||| | |||| |||| | |||||| |||    
T  42052854 tagggatggcaattgaacccagacccaatggatacccgcaaaaaatacccacaatgggtagggtaaaaccccgcttttatgggtctgggcacgggtacgg 42052953  T
Q  112 gtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgcccag 168  Q
    |||||| |||| || |||| |||  ||||| || |||||||||||||||||||||||    
T  42052954 gtaatacccacaaaattaaatgggtatgggcacgggtaagggtactatactgcccag 42053010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 49 - 178
Target Start/End: Complemental strand, 12186260 - 12186129
Alignment:
Q  49 cacataaaatatccataatgggtagggtaaaatcccgctatcatggatct-gagacgggtccgggtaatatccacgaatttaattggagatgggtacagg 147  Q
    |||| |||||||||| |||||||||||||||| |||||| | |||||||| || |||||| ||||||||| |||| || |||| |||  | ||| || ||    
T  12186260 cacaaaaaatatccacaatgggtagggtaaaaacccgcttttatggatctggacacgggtacgggtaatacccacaaaattaaatgggtacgggcacggg 12186161  T
Q  148 taagggtactatactgcccag-cccgcaaccc 178  Q
    ||||||||||||| | ||||| ||||||||||    
T  12186160 taagggtactatattacccagacccgcaaccc 12186129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 274 - 349
Target Start/End: Complemental strand, 14577047 - 14576972
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| |||| |||||||||||||||||| ||||||||||||||| | | |||||| ||||||||| |||||    
T  14577047 taaaccaaacaactgcttaatacaataacaactccattatgccggtgtataattttttagggatattttgaatgtt 14576972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 49 - 178
Target Start/End: Complemental strand, 14577275 - 14577144
Alignment:
Q  49 cacataaaatatccataatgggtagggtaaaatcccgctatcatggatct-gagacgggtccgggtaatatccacgaatttaattggagatgggtacagg 147  Q
    |||| |||||||||| ||||| ||||||||||||||||| |  ||||||| || |||||| ||||||||| |||| || |||| |||  | ||| || ||    
T  14577275 cacaaaaaatatccacaatggatagggtaaaatcccgcttttgtggatctggacacgggtacgggtaatacccacaaaattaaatgggtacgggcacggg 14577176  T
Q  148 taagggtactatactgcccag-cccgcaaccc 178  Q
    ||||||||||||||| ||||| ||||||||||    
T  14577175 taagggtactatactacccagacccgcaaccc 14577144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 274 - 349
Target Start/End: Complemental strand, 21246099 - 21246024
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| |||| ||| |||||||||||||||||| ||||||||||| | | |||||||||||||||| |||||    
T  21246099 taaaccaaacaactgcttgatacaataacaacttcatcatgccggtgtataattttttagagatattttgaatgtt 21246024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 54 - 168
Target Start/End: Complemental strand, 23147887 - 23147772
Alignment:
Q  54 aaaatatccataatgggtagggtaaaatcccgctatcatggatct-gagacgggtccgggtaatatccacgaatttaattggagatgggtacaggtaagg 152  Q
    |||||||||| |||||||||||||||| |||||| | |||||||| |  |||||| ||||||||| |||| || |||| |||  ||||| || ||||| |    
T  23147887 aaaatatccacaatgggtagggtaaaaccccgcttttatggatctaggcacgggtacgggtaatacccacaaaattaaatgggtatgggcacgggtaaag 23147788  T
Q  153 gtactatactgcccag 168  Q
    ||||||||||||||||    
T  23147787 gtactatactgcccag 23147772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 274 - 349
Target Start/End: Complemental strand, 42755601 - 42755526
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| |||| |||||||||||||||||| ||| ||||||||||| | | |||||| |||||||||||||||    
T  42755601 taaaccaaacaactgcttaatacaataacaactccatcatgccggtgtataattttttagggatattttggatgtt 42755526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 349
Target Start/End: Original strand, 7250429 - 7250519
Alignment:
Q  259 gcctaaactagaacctaaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    |||||||||| ||| |||||||||||  |  |||||||||||| |||| ||| |||| |||||||| | ||||||||||||||||||||||    
T  7250429 gcctaaactaaaacttaaaccaaaaatatgtttaatacaataataactccatcatgctggtgtacaattttttagagatattttggatgtt 7250519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 168
Target Start/End: Complemental strand, 25938882 - 25938724
Alignment:
Q  11 catagggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggatctg-agacgggtcc 109  Q
    |||||||||| |||||| || |||  |||||| |||  || | |||||| ||| ||||||||||||||||  ||||| | |||| |||| | |||||| |    
T  25938882 catagggatggcaattggacccagattcaatggatacccataaaaaatacccacaatgggtagggtaaaactccgcttttatgggtctggacacgggtac 25938783  T
Q  110 gggtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgcccag 168  Q
    |||||||| |||| || |||| |||  ||||| || |||||||||||||||||||||||    
T  25938782 gggtaatacccacaaaattaaatgggtatgggcacgggtaagggtactatactgcccag 25938724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 349
Target Start/End: Complemental strand, 33983412 - 33983322
Alignment:
Q  259 gcctaaactagaacctaaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    |||||||||| |||||||| ||| |||||  |||||||| ||||||||  |||||||  ||||||| | ||||||||||||||||||||||    
T  33983412 gcctaaactaaaacctaaatcaataaactgtttaatacagtaacaactctattatgcgagtgtacaattttttagagatattttggatgtt 33983322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 181
Target Start/End: Complemental strand, 38001119 - 38000949
Alignment:
Q  13 tagggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgg 111  Q
    |||||||| |||||| || ||| | |||||  || || || |||||| | |||||||||||||||||| |||| | | |||| | || | |||||| |||    
T  38001119 tagggatggcaattggacccagacccaatgggtactcgcaaaaaatacctataatgggtagggtaaaaccccgtttttatgggtatgggcacgggtacgg 38001020  T
Q  112 gtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgcccag-cccgcaaccccgc 181  Q
    |||||| |||| || |||| |||| ||||| ||  |||||||||||||||||||||| |||||||||||||    
T  38001019 gtaatacccacaaaattaaatggatatgggcacgagtaagggtactatactgcccagacccgcaaccccgc 38000949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 261 - 349
Target Start/End: Original strand, 1757867 - 1757955
Alignment:
Q  261 ctaaactagaacctaaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    |||||||  ||||||||  |||||||||||||||||||||||||||||||  ||||| |||||| |  ||||| |||||||| ||||||    
T  1757867 ctaaactcaaacctaaataaaaaaactacttaatacaataacaacttcatcttgccgatgtacaattgtttagggatattttagatgtt 1757955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 274 - 322
Target Start/End: Complemental strand, 52595805 - 52595757
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgta 322  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  52595805 taaaccaaacaactacttaatacaataacaacttcatcatgccggtgta 52595757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 349
Target Start/End: Original strand, 2224807 - 2224882
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| |||| ||||||| |||||||||| ||| ||||||||||| | | |||||| |||||||||||||||    
T  2224807 taaaccaaacaactgcttaatataataacaactccatcatgccggtgtataattttttagggatattttggatgtt 2224882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 349
Target Start/End: Original strand, 29148866 - 29148941
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| ||||||||||||||||||||||| ||| ||||||||||| | | ||||||  |||||| |||||||    
T  29148866 taaaccaaacaactacttaatacaataacaactccatcatgccggtgtataattttttaggaatatttcggatgtt 29148941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 349
Target Start/End: Complemental strand, 41003583 - 41003508
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| ||||| ||||||||||||||||| ||| |||||| |||| | | |||||| |||||||||||||||    
T  41003583 taaaccaaacaactatttaatacaataacaactccatcatgccgttgtataattttttagggatattttggatgtt 41003508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 349
Target Start/End: Original strand, 42053117 - 42053192
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| ||||||||||||||||||||||| ||| ||||||||||| | | ||||||  |||||| |||||||    
T  42053117 taaaccaaacaactacttaatacaataacaactccatcatgccggtgtataattttttaggaatatttcggatgtt 42053192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 259 - 349
Target Start/End: Complemental strand, 46030479 - 46030390
Alignment:
Q  259 gcctaaactagaacctaaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    |||||||||  ||||||||  |||||||||||||||||||||||||||||||  ||||| |||||| |  ||||| |||||||| ||||||    
T  46030479 gcctaaactcaaacctaaat-aaaaaactacttaatacaataacaacttcatcttgccgatgtacaattgtttagggatattttagatgtt 46030390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 178
Target Start/End: Original strand, 2720858 - 2720989
Alignment:
Q  49 cacataaaatatccataatgggtagggtaaaatcccgctatcatggatctgagac--gggtccgggtaatatccacgaatttaattggagatgggtacag 146  Q
    |||| |||||||||| |||||||||||||||| |||||| | ||||||||| |||  |||| ||||||||| |||| || |||| |||  | ||| || |    
T  2720858 cacaaaaaatatccacaatgggtagggtaaaaacccgcttttatggatctg-gacttgggtacgggtaatacccacaaaattaaatgggtacgggcacgg 2720956  T
Q  147 gtaagggtactatactgcccag-cccgcaaccc 178  Q
    |||||||||||||| | ||||| ||||||||||    
T  2720957 gtaagggtactatattacccagacccgcaaccc 2720989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 181
Target Start/End: Original strand, 3094605 - 3094734
Alignment:
Q  54 aaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgggtaatatccacgaatttaattggagatgggtacaggtaagg 152  Q
    |||||| ||| |||||| ||||||||| |||||| | |||| |||| | ||| || || |||||| |||| || |||| |||  ||||| || |||||||    
T  3094605 aaaatacccacaatgggaagggtaaaaccccgcttttatgggtctgggcacgagtacgagtaatacccacaaaattaaatgggtatgggcacgggtaagg 3094704  T
Q  153 gtactatactgcccag-cccgcaaccccgc 181  Q
    |||||||||||||||| |||||||||||||    
T  3094705 gtactatactgcccagacccgcaaccccgc 3094734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 178
Target Start/End: Complemental strand, 12188254 - 12188123
Alignment:
Q  49 cacataaaatatccataatgggtagggtaaaatcccgctatcatggatctgagac--gggtccgggtaatatccacgaatttaattggagatgggtacag 146  Q
    |||| |||||||||| |||||||||||||||| |||||| | ||||||||| |||  |||| ||||||||| |||| || |||| |||  | ||| || |    
T  12188254 cacaaaaaatatccacaatgggtagggtaaaaacccgcttttatggatctg-gacttgggtacgggtaatacccacaaaattaaatgggtacgggcacgg 12188156  T
Q  147 gtaagggtactatactgcccag-cccgcaaccc 178  Q
    |||||||||||||| | ||||| ||||||||||    
T  12188155 gtaagggtactatattacccagacccgcaaccc 12188123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 181
Target Start/End: Original strand, 22312993 - 22313113
Alignment:
Q  51 cataaaatatccataatgggtagggtaaaatcccgctatcatggatctgagacgggtccgggtaatatccacgaatttaattggagatgggtacaggtaa 150  Q
    ||||||||||||| ||||||||||||||||| ||||||||||           ||||| |||||||| |||||||||||| |||  ||||  || |||||    
T  22312993 cataaaatatccacaatgggtagggtaaaattccgctatcat-----------gggtctgggtaatacccacgaatttaaatgggtatggacacgggtaa 22313081  T
Q  151 gggtactatactgcccag-cccgcaaccccgc 181  Q
    ||||||||||| | |||| |||||||||||||    
T  22313082 gggtactataccgtccagccccgcaaccccgc 22313113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 259 - 304
Target Start/End: Original strand, 28928451 - 28928496
Alignment:
Q  259 gcctaaactagaacctaaaccaaaaaactacttaatacaataacaa 304  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||    
T  28928451 gcctaaactaaaacctaaaccaaaaaactgcttaatacaataacaa 28928496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 289 - 349
Target Start/End: Complemental strand, 21076072 - 21076012
Alignment:
Q  289 cttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    |||||||||||||||||| ||| ||||||||||| | | |||||| |||||||||||||||    
T  21076072 cttaatacaataacaactccatcatgccggtgtataattttttagggatattttggatgtt 21076012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 349
Target Start/End: Complemental strand, 652511 - 652436
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| |||| |||||||||||||||||| ||| ||| ||||||| | | ||||||  ||||||||||||||    
T  652511 taaaccaaacaactgcttaatacaataacaactccatcatgtcggtgtataattttttaggtatattttggatgtt 652436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 349
Target Start/End: Complemental strand, 23147665 - 23147590
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| |||| ||||||| |||||||||||||| ||||||||||| | | ||||||  |||||| |||||||    
T  23147665 taaaccaaacaactgcttaatataataacaacttcatcatgccggtgtataattttttaggaatatttcggatgtt 23147590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 349
Target Start/End: Original strand, 32655372 - 32655447
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| ||||||||||||||||| ||||| ||| ||||||||||| | | ||||||  |||||| |||||||    
T  32655372 taaaccaaacaactacttaatacaatatcaactccatcatgccggtgtataattttttaggaatatttcggatgtt 32655447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 349
Target Start/End: Complemental strand, 38000856 - 38000781
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| ||||  ||||||||||||||||| ||| |||||||||||   | |||||| |||||||||||||||    
T  38000856 taaaccaaacaactgtttaatacaataacaactccatcatgccggtgtatgattttttagggatattttggatgtt 38000781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 349
Target Start/End: Original strand, 52180627 - 52180702
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| ||||||||||||||||| ||||| ||| ||||||||||| | | ||||||  |||||| |||||||    
T  52180627 taaaccaaacaactacttaatacaatatcaactccatcatgccggtgtataattttttaggaatatttcggatgtt 52180702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 349
Target Start/End: Original strand, 54978996 - 54979071
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| ||||||||||||||||||||||| ||| |||||| |||| | | ||||||  |||||| |||||||    
T  54978996 taaaccaaacaactacttaatacaataacaactacatcatgccgatgtataattttttaggaatatttcggatgtt 54979071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 54 - 181
Target Start/End: Complemental strand, 21246321 - 21246192
Alignment:
Q  54 aaaatatccataatgggtagggtaaaatcccgctatcatggatct-gagacgggtccgggtaatatccacgaatttaattggagatgggtacaggtaagg 152  Q
    |||||| ||| ||||||||||||||||||||||| | |||| | | || |||||| ||| ||||| ||||  | |||| |||| || || || |||||||    
T  21246321 aaaatacccacaatgggtagggtaaaatcccgcttttatgggtatggacacgggtacggataatacccacagaattaaatggatattggcacgggtaagg 21246222  T
Q  153 gtactatactgcccag-cccgcaaccccgc 181  Q
    |||||||| || |||| |||||||||||||    
T  21246221 gtactatattgtccagacccgcaaccccgc 21246192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 180
Target Start/End: Complemental strand, 8066439 - 8066312
Alignment:
Q  54 aaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgggtaatatccacgaatttaattggagatgggtacaggtaagg 152  Q
    |||||| ||| ||||| ||||||||||||||||| | |||| |||||| |||||| ||||||||| |||| ||  ||| |||  ||||| || |||||||    
T  8066439 aaaatacccacaatggatagggtaaaatcccgct-ttatgggtctgagcacgggtacgggtaatacccacaaaactaaatgggtatgggcacgggtaagg 8066341  T
Q  153 gtactatactgcccag-cccgcaaccccg 180  Q
    |||||||| || |||| |||| |||||||    
T  8066340 gtactatattgtccagacccgtaaccccg 8066312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 168
Target Start/End: Original strand, 54932384 - 54932488
Alignment:
Q  65 aatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgggtaatatccacgaatttaattggagatgggtacaggtaagggtactatactg 163  Q
    |||||||||| |||||||||||| | |||| |||| | || ||| ||||||||| |||| || |||| |||| ||||| || |||||  |||||||||||    
T  54932384 aatgggtaggataaaatcccgcttttatgggtctgggcactggtacgggtaatacccacaaaattaaatggacatgggcacgggtaacagtactatactg 54932483  T
Q  164 cccag 168  Q
    |||||    
T  54932484 cccag 54932488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 274 - 349
Target Start/End: Original strand, 3387062 - 3387137
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| |||| |||||||||||||||||| ||| ||| ||||||| | | ||||||  |||||| |||||||    
T  3387062 taaaccaaacaactgcttaatacaataacaactccatcatgtcggtgtataattttttaggaatatttcggatgtt 3387137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 259 - 310
Target Start/End: Original strand, 46257980 - 46258030
Alignment:
Q  259 gcctaaactagaacctaaaccaaaaaactacttaatacaataacaacttcat 310  Q
    |||||||||  ||||||||  |||||||||||||||||||||||||||||||    
T  46257980 gcctaaactcaaacctaaat-aaaaaactacttaatacaataacaacttcat 46258030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 181
Target Start/End: Complemental strand, 652758 - 652588
Alignment:
Q  13 tagggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgg 111  Q
    |||||||| |||||| || ||| | ||||| |||  | || |||||| ||| |||| ||||||||||| ||| || | |||| |||| | || ||| |||    
T  652758 tagggatggcaattggacccagacccaatggatacccgcaaaaaatacccacaatgtgtagggtaaaacccctcttttatgggtctgggcacaggtacgg 652659  T
Q  112 gtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgcccag-cccgcaaccccgc 181  Q
    |||||| |||| || |||| |||  ||||| || |||||||||| |||||||||||| || ||||||||||    
T  652658 gtaatacccacaaaattaaatgggtatgggcacgggtaagggtattatactgcccagacctgcaaccccgc 652588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 168
Target Start/End: Complemental strand, 52596010 - 52595912
Alignment:
Q  71 tagggtaaaatcccgctatcatggatctgag-acgggtccgggtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgcccag 168  Q
    |||||||||| |||||| | || |||||| | |||||| ||||||||| |||| || | || |||  ||||| || |||||||||||||||||||||||    
T  52596010 tagggtaaaaccccgcttttatagatctgggcacgggtacgggtaatacccacaaaataaaatgggtatgggcacgggtaagggtactatactgcccag 52595912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 181
Target Start/End: Original strand, 2224669 - 2224714
Alignment:
Q  137 atgggtacaggtaagggtactatactgcccag-cccgcaaccccgc 181  Q
    ||||| || ||||||||||||||||||||||| |||||||||||||    
T  2224669 atgggcacgggtaagggtactatactgcccagacccgcaaccccgc 2224714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 94
Target Start/End: Complemental strand, 46081253 - 46081172
Alignment:
Q  13 tagggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatgg 94  Q
    ||||||||||||||| || |||  || ||||  || | || |||||||||| |||||||||||||||| |||||| ||||||    
T  46081253 tagggatgacaattggacccagattcgatgagcatccgcaaaaaatatccacaatgggtagggtaaaaccccgctttcatgg 46081172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 53141147 - 53141063
Alignment:
Q  12 atagggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggat 96  Q
    ||||||||| |||||| || ||| ||| ||| |||  | || |||||| ||| |||||||||||||||| |||||| ||||||||    
T  53141147 atagggatggcaattggacccagactcgatggatacccgcaaaaaatacccacaatgggtagggtaaaaccccgctttcatggat 53141063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 88; Significance: 3e-42; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 12 - 181
Target Start/End: Complemental strand, 25468000 - 25467829
Alignment:
Q  12 atagggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggatct-gagacgggtccg 110  Q
    |||||||||||||||| || ||||| ||||| |||  | ||||||||| ||| |||||||||||||||||||||||||||||| ||| | ||||||||||    
T  25468000 atagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaatgggtagggtaaaatcccgctatcatgggtctggggacgggtccg 25467901  T
Q  111 ggtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgcccag-cccgcaaccccgc 181  Q
    |||||||||||||||||||| |||  ||||| ||  |||||||||||||||||||||| |||||||||||||    
T  25467900 ggtaatatccacgaatttaaatgggtatgggcacgagtaagggtactatactgcccagccccgcaaccccgc 25467829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 13 - 181
Target Start/End: Complemental strand, 11672239 - 11672069
Alignment:
Q  13 tagggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgg 111  Q
    |||||||| |||||| || ||||| ||||| |||  ||||||||||| ||| |||||||||||||||| ||||||||||||| |||| | ||||||||||    
T  11672239 tagggatggcaattggacccaggcccaatggatacccacataaaatacccacaatgggtagggtaaaaccccgctatcatgggtctggggacgggtccgg 11672140  T
Q  112 gtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgcccag-cccgcaaccccgc 181  Q
    ||||||||||||||||| | |||  ||||| || ||||||||||||||||||||||| |||||||||||||    
T  11672139 gtaatatccacgaattttaatgggtatgggcacgggtaagggtactatactgcccagacccgcaaccccgc 11672069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 13 - 171
Target Start/End: Original strand, 5040653 - 5040812
Alignment:
Q  13 tagggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggatct-gagacgggtccgg 111  Q
    |||||||| |||||| || ||||| ||||| |||  | ||||||||||||| |||||||||||||||| ||||||||||||||||| | ||||| |||||    
T  5040653 tagggatggcaattggacccaggcccaatggatacccgcataaaatatccacaatgggtagggtaaaaccccgctatcatggatctggggacggatccgg 5040752  T
Q  112 gtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgcccagccc 171  Q
    |||||| |||||||||| | |||  ||||| || ||||||| ||||||||||||||||||    
T  5040753 gtaatacccacgaattttaatgggtatgggcacgggtaaggatactatactgcccagccc 5040812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 259 - 349
Target Start/End: Complemental strand, 39952773 - 39952683
Alignment:
Q  259 gcctaaactagaacctaaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||| ||| ||| ||||||||| | |||||||||||||||| |||||    
T  39952773 gcctaaactaaaacctaaaccaaaaaactgcttaatacaataacaactccatcatgtcggtgtacaattttttagagatattttgaatgtt 39952683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 259 - 349
Target Start/End: Original strand, 23298174 - 23298264
Alignment:
Q  259 gcctaaactagaacctaaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    |||||||||| |||||||||||||||||  |||||||||||||||||| |||  ||| |||||||| | ||||||||||||||||||||||    
T  23298174 gcctaaactaaaacctaaaccaaaaaacagcttaatacaataacaactacatcctgctggtgtacaatattttagagatattttggatgtt 23298264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 259 - 349
Target Start/End: Complemental strand, 25467751 - 25467661
Alignment:
Q  259 gcctaaactagaacctaaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    |||||||||| |||||||||||| ||||| ||||| ||| |||||||| |||| |||||||||||| | ||||||||||||||||||||||    
T  25467751 gcctaaactaaaacctaaaccaataaactgcttaaaacagtaacaactccattctgccggtgtacaattttttagagatattttggatgtt 25467661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 22 - 163
Target Start/End: Complemental strand, 39953004 - 39952869
Alignment:
Q  22 caattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggatctgagacgggtccgggtaatatcca 121  Q
    |||||| ||||||||||||||||||  | ||||||||| ||| |||||||||||||||| |||| |||||||| |||||     |  |||||||||||||    
T  39953004 caattgaactcaggctcaatgaatacccgcataaaatacccacaatgggtagggtaaaa-cccgatatcatgggtctga-----ggacgggtaatatcca 39952911  T
Q  122 cgaatttaattggagatgggtacaggtaagggtactatactg 163  Q
    ||||||||| |||| ||||| ||  |||||||||||||||||    
T  39952910 cgaatttaaatggatatgggcacgagtaagggtactatactg 39952869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 51 - 171
Target Start/End: Complemental strand, 48080514 - 48080393
Alignment:
Q  51 cataaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgggtaatatccacgaatttaattggagatgggtacaggta 149  Q
    ||||||||| ||| ||| |||||||||||| |||||||||| ||| | | | |||||||||||||||| |||||||||||| |||  ||||| || ||||    
T  48080514 cataaaatacccacaattggtagggtaaaaccccgctatcaaggaaccggggacgggtccgggtaatacccacgaatttaaatgggtatgggcacgggta 48080415  T
Q  150 agggtactatactgcccagccc 171  Q
    ||||||||||| ||||||||||    
T  48080414 agggtactataatgcccagccc 48080393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 13 - 171
Target Start/End: Original strand, 23297926 - 23298085
Alignment:
Q  13 tagggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgg 111  Q
    ||||||||||||||  || |||| |||||| |||    ||||||||| ||| |||||||||||||||| ||| ||||||||| |||| | ||| ||||||    
T  23297926 tagggatgacaattagacccaggttcaatggataccagcataaaatacccacaatgggtagggtaaaaccccactatcatgggtctggggacgagtccgg 23298025  T
Q  112 gtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgcccagccc 171  Q
    |||||| |||| ||||| | |||  ||| | || ||||||||||||||||||||||||||    
T  23298026 gtaatacccacaaattttaatgggtatgagcacgggtaagggtactatactgcccagccc 23298085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 49 - 181
Target Start/End: Complemental strand, 19619159 - 19619025
Alignment:
Q  49 cacataaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgggtaatatccacgaatttaattggagatgggtacagg 147  Q
    |||| |||||| ||| |||||||||||||||| |||||| | |||| |||| | |||||| ||||||||| |||| || |||| |||  ||||| || ||    
T  19619159 cacaaaaaatacccacaatgggtagggtaaaaccccgcttttatgggtctgggcacgggtacgggtaatacccacaaaattaaatgggtatgggcacggg 19619060  T
Q  148 taagggtactatactgcccag-cccgcaaccccgc 181  Q
    ||||||||||||||||||||| |||||||||||||    
T  19619059 taagggtactatactgcccagacccgcaaccccgc 19619025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 65 - 168
Target Start/End: Complemental strand, 40564391 - 40564287
Alignment:
Q  65 aatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgggtaatatccacgaatttaattggagatgggtacaggtaagggtactatactg 163  Q
    |||||||||||||||| |||||||||||| ||||| | ||||||  |||||||| |||| ||||||| |||  ||||| || ||||||||||||||||||    
T  40564391 aatgggtagggtaaaaccccgctatcatgaatctggggacgggtttgggtaatacccactaatttaaatgggtatgggcacgggtaagggtactatactg 40564292  T
Q  164 cccag 168  Q
    |||||    
T  40564291 cccag 40564287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 168
Target Start/End: Complemental strand, 41924438 - 41924323
Alignment:
Q  54 aaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgggtaatatccacgaatttaattggagatgggtacaggtaagg 152  Q
    |||||| ||| |||||||||||||||| |||||| | ||||||||| | |||||| ||||||||| |||| || |||| || | ||||| || |||||||    
T  41924438 aaaatacccacaatgggtagggtaaaaccccgcttttatggatctgggtacgggtacgggtaatacccacaaaattaaatgaatatgggcacgggtaagg 41924339  T
Q  153 gtactatactgcccag 168  Q
    ||||||||||||||||    
T  41924338 gtactatactgcccag 41924323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 178
Target Start/End: Original strand, 50480703 - 50480834
Alignment:
Q  49 cacataaaatatccataatgggtagggtaaaatcccgctatcatggatct-gagacgggtccgggtaatatccacgaatttaattggagatgggtacagg 147  Q
    |||| |||||||||| |||||||||||||||| |||||| | |||||||| || |||||| ||||||||| |||| || |||| |||  | ||| || ||    
T  50480703 cacaaaaaatatccacaatgggtagggtaaaaccccgcttttatggatctggacacgggtacgggtaatacccacaaaattaaatgggtacgggcacggg 50480802  T
Q  148 taagggtactatactgcccag-cccgcaaccc 178  Q
    ||||||||||||||| ||||| ||||||||||    
T  50480803 taagggtactatactacccagacccgcaaccc 50480834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 274 - 349
Target Start/End: Original strand, 50480931 - 50481006
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| |||| |||||||||||||||||| ||||||||||||||| | | |||||| |||||||||||||||    
T  50480931 taaaccaaacaactgcttaatacaataacaactccattatgccggtgtataattttttagggatattttggatgtt 50481006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 54 - 178
Target Start/End: Complemental strand, 49360420 - 49360294
Alignment:
Q  54 aaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgggtaatatccacgaatttaattggagatgggtacaggtaagg 152  Q
    |||||||||| |||||||||||||||| |||||| | ||||||||| | |||||| ||||||||| |||| || |||| |||  | ||| || |||||||    
T  49360420 aaaatatccacaatgggtagggtaaaaccccgcttttatggatctgggcacgggtacgggtaatacccacaaaattaaatgggtacgggcacgggtaagg 49360321  T
Q  153 gtactatactgcccag-cccgcaaccc 178  Q
    |||||||||| ||||| ||||||||||    
T  49360320 gtactatactacccagacccgcaaccc 49360294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 181
Target Start/End: Complemental strand, 39352928 - 39352799
Alignment:
Q  54 aaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgggtaatatccacgaatttaattggagatgggtacaggtaagg 152  Q
    |||||| ||| |||||||||||||||| || ||| | |||| |||| | |||||| ||||||||| |||| || |||| |||  ||||| || |||||||    
T  39352928 aaaatacccacaatgggtagggtaaaaccctgcttttatgggtctgggtacgggtacgggtaatacccacaaaattaaatgggtatgggcacgggtaagg 39352829  T
Q  153 gtactatactgcccag-cccgcaaccccgc 181  Q
    |||||||||||||||| |||||||||||||    
T  39352828 gtactatactgcccagacccgcaaccccgc 39352799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 261 - 349
Target Start/End: Complemental strand, 40564202 - 40564114
Alignment:
Q  261 ctaaactagaacctaaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    |||||||| ||||||||| | |||| |  ||||||||||||||||| |||| |||||||||||| | ||| ||||||||||||||||||    
T  40564202 ctaaactaaaacctaaactagaaaattgtttaatacaataacaactccattctgccggtgtacaatttttaagagatattttggatgtt 40564114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 259 - 306
Target Start/End: Complemental strand, 11671991 - 11671944
Alignment:
Q  259 gcctaaactagaacctaaaccaaaaaactacttaatacaataacaact 306  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||    
T  11671991 gcctaaactaaaacctaaaccaaaaaactacttaatacaataacaact 11671944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 22844987 - 22845066
Alignment:
Q  270 aacctaaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| |||||||||||||||||| ||||| || |||  |||||||||||| | |||||| |||||||||||||||    
T  22844987 aacctaaacaaaaaaactacttaatacagtaacagctccatcctgccggtgtacaattttttagggatattttggatgtt 22845066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 54 - 168
Target Start/End: Original strand, 24987046 - 24987161
Alignment:
Q  54 aaaatatccataatgggtagggtaaaatcccgctatcatggatctg-agacgggtccgggtaatatccacgaatttaattggagatgggtacaggtaagg 152  Q
    |||||| ||| |||||||||||||||| |||||| | |||| |||| | |||||| ||||||||| |||| || |||| |||  ||||| || |||||||    
T  24987046 aaaatacccacaatgggtagggtaaaaccccgcttttatgggtctggacacgggtacgggtaatacccacaaaattaaatgggtatgggcacgggtaagg 24987145  T
Q  153 gtactatactgcccag 168  Q
    ||||||||||||||||    
T  24987146 gtactatactgcccag 24987161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 274 - 349
Target Start/End: Complemental strand, 49360201 - 49360126
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| |||| |||||||||||||||||| ||| ||||||||||| | | |||||||||||||||| |||||    
T  49360201 taaaccaaacaactgcttaatacaataacaactccatcatgccggtgtataattttttagagatattttgaatgtt 49360126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 349
Target Start/End: Original strand, 5040900 - 5040990
Alignment:
Q  259 gcctaaactagaacctaaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    |||||||||| ||||||||||||||| || ||||||||||||||||||  ||  ||| |||||||| | ||||||| |||||||| |||||    
T  5040900 gcctaaactaaaacctaaaccaaaaacctgcttaatacaataacaactctatcttgctggtgtacaatattttagatatattttgaatgtt 5040990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 54 - 171
Target Start/End: Complemental strand, 14418681 - 14418563
Alignment:
Q  54 aaaatatccataatgggtagggtaaaatcccgctatcatggat-ctgagacgggtccgggtaatatccacgaatttaattggagatgggtacaggtaagg 152  Q
    |||||| |||||||||||||||||||| |||||| |||||||| | |    || |||||||| ||||||  ||||||| |||  |||||||  |||||||    
T  14418681 aaaatacccataatgggtagggtaaaaccccgctttcatggatccaggtttggatccgggtattatccataaatttaaatgggtatgggtatgggtaagg 14418582  T
Q  153 gtactatactgcccagccc 171  Q
    ||||||||||||| |||||    
T  14418581 gtactatactgccaagccc 14418563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 259 - 349
Target Start/End: Original strand, 50508718 - 50508808
Alignment:
Q  259 gcctaaactagaacctaaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    |||||||||| ||||||||||| |||| | ||||||  ||||||||||  ||  |||||||||||| | ||| ||||||||||||||||||    
T  50508718 gcctaaactaaaacctaaaccagaaaattgcttaatttaataacaactcaatcctgccggtgtacaatttttaagagatattttggatgtt 50508808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 181
Target Start/End: Complemental strand, 46819578 - 46819449
Alignment:
Q  54 aaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgggtaatatccacgaatttaattggagatgggtacaggtaagg 152  Q
    |||||||||| ||||||||||||||||  ||||| || ||||| |||  | |||||||||||||| |||  ||||    |||| |||||||| |||||||    
T  46819578 aaaatatccacaatgggtagggtaaaactccgctttcttggatatgaacatgggtccgggtaatacccataaattgttatggatatgggtacgggtaagg 46819479  T
Q  153 gtactatactgcccag-cccgcaaccccgc 181  Q
    |||||||||| | ||| |||||||||||||    
T  46819478 gtactatactacacagccccgcaaccccgc 46819449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 274 - 342
Target Start/End: Complemental strand, 39352706 - 39352638
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatatttt 342  Q
    ||||||||| |||| |||||||||||||||||| ||| ||||||||||| | | |||||| ||||||||    
T  39352706 taaaccaaacaactgcttaatacaataacaactccatcatgccggtgtataattttttagggatatttt 39352638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 44792236 - 44792392
Alignment:
Q  13 tagggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgg 111  Q
    |||||||| |||||| || ||| | ||||| |||  | || |||||| ||| |||||||||||||||| |||||| |  | | |||| | |||||| |||    
T  44792236 tagggatggcaattggacccagacccaatggatacccgcaaaaaatacccacaatgggtagggtaaaaccccgcttttctaggtctgggcacgggtacgg 44792335  T
Q  112 gtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgcccag 168  Q
    |||||| |||| || |||| |||  ||||| || |||||||||||||||||||||||    
T  44792336 gtaatacccacaaaattaaatgggtatgggcacgggtaagggtactatactgcccag 44792392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 349
Target Start/End: Complemental strand, 6408821 - 6408746
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    |||| |||| |||| ||||||||||||| |||| ||| ||||||||||| | | |||||| |||||||||||||||    
T  6408821 taaatcaaacaactgcttaatacaataataactccatcatgccggtgtataattttttagggatattttggatgtt 6408746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 349
Target Start/End: Original strand, 24987268 - 24987343
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    |||||||||  |||||||||||||||||||||| ||| ||||||||||| | | ||||||  |||||| |||||||    
T  24987268 taaaccaaactactacttaatacaataacaactccatcatgccggtgtataattttttaggaatatttcggatgtt 24987343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 349
Target Start/End: Complemental strand, 41924216 - 41924141
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| |||| |||||||||||||||||| ||| ||||||||||| | | ||||||  |||||| |||||||    
T  41924216 taaaccaaacaactgcttaatacaataacaactccatcatgccggtgtataattttttaggaatatttcggatgtt 41924141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 259 - 349
Target Start/End: Complemental strand, 48080315 - 48080233
Alignment:
Q  259 gcctaaactagaacctaaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    |||||||||| ||||||||||| |||| | ||||||||||||||||||        |||||||||| | ||| ||||||||||||||||||    
T  48080315 gcctaaactaaaacctaaaccagaaaattgcttaatacaataacaact--------ccggtgtacaatttttaagagatattttggatgtt 48080233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 349
Target Start/End: Complemental strand, 19618916 - 19618856
Alignment:
Q  289 cttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    |||||||||||||||||| ||| ||| ||||||| | | |||||| |||||||||||||||    
T  19618916 cttaatacaataacaactccatcatgtcggtgtataattttttagggatattttggatgtt 19618856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 274 - 349
Target Start/End: Original strand, 13735496 - 13735571
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| ||||  ||||||||||||||||| | | ||||||||||| | | ||||||  ||||||||||||||    
T  13735496 taaaccaaacaactgtttaatacaataacaactccgtcatgccggtgtataattttttaggaatattttggatgtt 13735571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 349
Target Start/End: Complemental strand, 12905876 - 12905786
Alignment:
Q  259 gcctaaactagaacctaaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    |||||||||| || |||||| | |||| | |||||||||||||||||| |||  |||  ||||||| | ||| |||||||||||| |||||    
T  12905876 gcctaaactaaaatctaaactagaaaattgcttaatacaataacaactccatcttgctagtgtacaatttttaagagatattttgaatgtt 12905786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 349
Target Start/End: Complemental strand, 46819350 - 46819281
Alignment:
Q  280 aaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||||||| || ||||||||||||||  ||||| |||||| |  ||||| |||||||| ||||||    
T  46819350 aaaaaactacttattagaataacaacttcatcttgccgatgtacaattgtttagggatattttagatgtt 46819281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 322
Target Start/End: Original strand, 44792499 - 44792547
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgta 322  Q
    |||| |||| ||||||||||||||||||||||| ||| |||| ||||||    
T  44792499 taaaacaaacaactacttaatacaataacaactccatcatgctggtgta 44792547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 84; Significance: 7e-40; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 13 - 167
Target Start/End: Original strand, 667576 - 667731
Alignment:
Q  13 tagggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggatct-gagacgggtccgg 111  Q
    |||||||| |||||| |||||||| ||||| ||| || ||||||||| ||| |||||||||||||||| ||||||||||||| ||| | |||||||||||    
T  667576 tagggatggcaattggactcaggcccaatggatactcgcataaaatacccacaatgggtagggtaaaaccccgctatcatgggtctggggacgggtccgg 667675  T
Q  112 gtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgccca 167  Q
    ||||||||||||||||||| |||  ||||| || ||||||||||||||||||||||    
T  667676 gtaatatccacgaatttaaatgggtatgggcacgggtaagggtactatactgccca 667731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 181
Target Start/End: Original strand, 15149826 - 15149996
Alignment:
Q  13 tagggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggatct-gagacgggtccgg 111  Q
    ||||||||||||||| |||||| | ||||| |||  | |||||||||||||||||||||||||| ||| ||||||||||||||||| | |||||||||||    
T  15149826 tagggatgacaattggactcagacccaatggatacccgcataaaatatccataatgggtagggtgaaaccccgctatcatggatctggggacgggtccgg 15149925  T
Q  112 gtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgcccagc-ccgcaaccccgc 181  Q
    |||||| |  ||||||||| |||  ||||  ||  ||| || ||||||||| |||||| ||||||||||||    
T  15149926 gtaataccagcgaatttaaatgggtatggacacgagtatggatactatactacccagctccgcaaccccgc 15149996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 4481567 - 4481411
Alignment:
Q  13 tagggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgg 111  Q
    |||||||| |||||| || ||| | ||||| |||  | || |||||| ||| |||||||||||||||| |||||| | ||||||||| | |||||| |||    
T  4481567 tagggatggcaattggacccagacccaatggatacccgcaaaaaatacccacaatgggtagggtaaaaccccgcttttatggatctgggcacgggtacgg 4481468  T
Q  112 gtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgcccag 168  Q
    |||||| |||| || |||| |||| ||||| || |||||||||||||||||||||||    
T  4481467 gtaatacccacaaaattaaatggatatgggcacgggtaagggtactatactgcccag 4481411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 274 - 349
Target Start/End: Original strand, 4592050 - 4592126
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaact-tcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    |||||||||||||||||||||||||||||||||  ||| ||||||||||||| | |||||| |||||||||||||||    
T  4592050 taaaccaaaaaactacttaatacaataacaactcccatcatgccggtgtacaattttttagggatattttggatgtt 4592126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 261 - 349
Target Start/End: Original strand, 15150071 - 15150159
Alignment:
Q  261 ctaaactagaacctaaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    |||||||| ||||||||||||||| || ||||||||||||||||||||||  || ||||||||| | || ||||||||||||| |||||    
T  15150071 ctaaactaaaacctaaaccaaaaatctgcttaatacaataacaacttcatcctgtcggtgtacaattttgtagagatattttgaatgtt 15150159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 25425267 - 25425111
Alignment:
Q  13 tagggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgg 111  Q
    |||||||| |||||| || ||| | ||||| |||  | || |||||| ||| |||||||||||||||| |||||| | ||||||||| | |||||| |||    
T  25425267 tagggatggcaattggacccagacccaatggatacccgcaaaaaatacccacaatgggtagggtaaaaccccgcttttatggatctgggcacgggtacgg 25425168  T
Q  112 gtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgcccag 168  Q
    |||||| |||| || |||| |||  ||||| || |||||||||||||||||||||||    
T  25425167 gtaatacccacaaaattaaatgggtatgggcacgggtaagggtactatactgcccag 25425111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 38620902 - 38620746
Alignment:
Q  13 tagggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggatctg-agacgggtccgg 111  Q
    |||||||| |||||| || |||   ||||| |||| | || |||||||||||||||||||||||||||  ||||| | |||| |||| | |||||| |||    
T  38620902 tagggatggcaattggacccagatccaatggatatccgcaaaaaatatccataatgggtagggtaaaacaccgcttttatgggtctggacacgggtacgg 38620803  T
Q  112 gtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgcccag 168  Q
     ||||| |||| || |||| |||| ||||| || |||||||||||||||||||||||    
T  38620802 ataatacccacaaaattaaatggatatgggcacgggtaagggtactatactgcccag 38620746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 54 - 171
Target Start/End: Complemental strand, 29155790 - 29155672
Alignment:
Q  54 aaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgggtaatatccacgaatttaattggagatgggtacaggtaagg 152  Q
    |||||| |||| || |||||||||||| |||||| |||||| | || | |||||||||||||||| |||| ||||||| |||  ||||| || |||||||    
T  29155790 aaaatacccatgataggtagggtaaaaccccgctttcatgggtttgggcacgggtccgggtaatacccacaaatttaaatgggtatgggcacgggtaagg 29155691  T
Q  153 gtactatactgcccagccc 171  Q
    |||||||||||| ||||||    
T  29155690 gtactatactgctcagccc 29155672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 181
Target Start/End: Complemental strand, 3329633 - 3329504
Alignment:
Q  54 aaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgggtaatatccacgaatttaattggagatgggtacaggtaagg 152  Q
    |||||||||| ||||||||||||||||||||| | | |||| |||| | |||||| ||||||||| |||| || |||| |||  ||||| || |||||||    
T  3329633 aaaatatccacaatgggtagggtaaaatcccgtttttatgggtctgggcacgggtacgggtaatacccacaaaattaaatgggtatgggcacgggtaagg 3329534  T
Q  153 gtactatactgcccag-cccgcaaccccgc 181  Q
    ||| |||||||| ||| |||||||||||||    
T  3329533 gtattatactgctcagacccgcaaccccgc 3329504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 33867139 - 33867295
Alignment:
Q  13 tagggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgg 111  Q
    |||||||| |||||| || ||| | ||||| |||  | || |||||| ||| |||||||||||||||| |||||| | |||| |||| | |||||| |||    
T  33867139 tagggatggcaattggacccagacccaatggatacccgcaaaaaatacccacaatgggtagggtaaaaccccgcttttatgggtctgggcacgggtacgg 33867238  T
Q  112 gtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgcccag 168  Q
    |||||| |||| || |||| |||  ||||| || |||||||||||||||||||||||    
T  33867239 gtaatacccacaaaattaaatgggtatgggcacgggtaagggtactatactgcccag 33867295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 274 - 349
Target Start/End: Original strand, 17961311 - 17961386
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| |||| |||||||||||||||||| ||| ||||||||||| | | |||||| |||||||||||||||    
T  17961311 taaaccaaacaactgcttaatacaataacaactccatcatgccggtgtataattttttagggatattttggatgtt 17961386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 274 - 322
Target Start/End: Complemental strand, 38620639 - 38620591
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgta 322  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  38620639 taaaccaaacaactacttaatacaataacaacttcatcatgccggtgta 38620591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 349
Target Start/End: Complemental strand, 3329411 - 3329336
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| |||| |||||||||||||||||| ||| ||||||||| | | | |||||| |||||||||||||||    
T  3329411 taaaccaaacaactgcttaatacaataacaactccatcatgccggtgcataattttttagggatattttggatgtt 3329336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 349
Target Start/End: Original strand, 13142429 - 13142504
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| ||||||||||||||||||||||| ||| ||||||||||| | | ||||||  |||||| |||||||    
T  13142429 taaaccaaacaactacttaatacaataacaactccatcatgccggtgtataattttttaggaatatttcggatgtt 13142504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 349
Target Start/End: Original strand, 33867402 - 33867477
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| ||||||||||||||||||||||| ||| ||||||||||| | | ||||||  |||||| |||||||    
T  33867402 taaaccaaacaactacttaatacaataacaactccatcatgccggtgtataattttttaggaatatttcggatgtt 33867477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 349
Target Start/End: Original strand, 44070273 - 44070348
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| |||| |||||||||| ||||||| ||| ||||||||||| | | |||||| |||||||||||||||    
T  44070273 taaaccaaacaactgcttaatacaacaacaactccatcatgccggtgtataattttttagggatattttggatgtt 44070348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 259 - 349
Target Start/End: Original strand, 667813 - 667903
Alignment:
Q  259 gcctaaactagaacctaaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    |||||||||| ||| |||| || |||| | ||||||||||||| |||| |||  |||||||||||| | ||| ||||||||||||||||||    
T  667813 gcctaaactaaaacataaatcagaaaattgcttaatacaataaaaactccatcttgccggtgtacaatttttaagagatattttggatgtt 667903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 23232204 - 23232090
Alignment:
Q  55 aaatatccataatgggtagggtaaaatcccgctatcatggatctg-agacgggtccgggtaatatccacgaatttaattggagatgggtacaggtaaggg 153  Q
    ||||||||| |||||||||||||||| |||||| | |||| | || | | |||| ||||||||| |||| || |||| |||| ||| | || ||||||||    
T  23232204 aaatatccacaatgggtagggtaaaaccccgcttttatggttttggacatgggtacgggtaatacccacaaaattaaatggatatgagcacgggtaaggg 23232105  T
Q  154 tactatactgcccag 168  Q
    |||||||||||||||    
T  23232104 tactatactgcccag 23232090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 168
Target Start/End: Original strand, 13142172 - 13142329
Alignment:
Q  12 atagggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccg 110  Q
    ||||||||| |||||| || ||| ||||||  |||  |||| |||||| ||| |||||||||| ||||| |||||| | |||| |||| | |||||| |     
T  13142172 atagggatggcaattggacccagactcaatagatacccacaaaaaatacccacaatgggtaggataaaaccccgcttttatgggtctgggcacgggtaca 13142271  T
Q  111 ggtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgcccag 168  Q
    ||||||| |||| || |||| |||  | ||| || |||||||||||||||||||||||    
T  13142272 ggtaatacccacaaaattaaatgggcaagggcacgggtaagggtactatactgcccag 13142329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 161
Target Start/End: Complemental strand, 20937569 - 20937420
Alignment:
Q  13 tagggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggatctg-agacgggtccgg 111  Q
    |||||||| |||||| || || | ||||||  ||| | || |||||||||| |||||||| ||||||| |||||| |||||| |||| | |||||||||     
T  20937569 tagggatggcaattggacccacgttcaatgggtatccgcaaaaaatatccacaatgggtaaggtaaaaccccgctttcatgggtctggacacgggtccga 20937470  T
Q  112 gtaatatccacgaatttaattggagatgggtacaggtaagggtactatac 161  Q
    |||||| |||| ||||| | |||  |||   |||||||||||||||||||    
T  20937469 gtaatacccacaaattttaatgggtatgaacacaggtaagggtactatac 20937420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 17961056 - 17961212
Alignment:
Q  13 tagggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgg 111  Q
    |||||||  |||||| || ||| ||||||| |||| | || |||||| ||||||| |||||||||||| |||||| | |||| |||||| |||| | ||     
T  17961056 tagggattgcaattggacccagactcaatggatatccgcaaaaaatacccataataggtagggtaaaaccccgcttttatgggtctgagcacggatacgc 17961155  T
Q  112 gtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgcccag 168  Q
    |||||| |||  || |||| |||  | ||| || |||||||||||||||||||||||    
T  17961156 gtaatacccataaaattaaatgggtacgggcacgggtaagggtactatactgcccag 17961212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 277 - 349
Target Start/End: Original strand, 38958554 - 38958626
Alignment:
Q  277 accaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| ||||||||||||||| | | |||| ||||||||||| ||| |||||  |||||||||||||||    
T  38958554 accaaaaaattacttaatacaataagagcctcatcatgccggtgtatagttttttaaggatattttggatgtt 38958626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 349
Target Start/End: Complemental strand, 25425001 - 25424926
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| ||||||||||||||||| ||||| ||| ||||||||||| | | ||||||  |||||| |||||||    
T  25425001 taaaccaaacaactacttaatacaatatcaactccatcatgccggtgtataattttttaggaatatttcggatgtt 25424926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 29155572 - 29155493
Alignment:
Q  270 aacctaaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||||||||||||||||| |||||||||  || |||  |||| ||||| | | |||||| |||||||||||||||    
T  29155572 aacctaaaccaaaaaactacttactacaataacggctccatcctgcctgtgtaaaattttttagggatattttggatgtt 29155493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 54 - 168
Target Start/End: Original strand, 31440279 - 31440394
Alignment:
Q  54 aaaatatccataatgggtagggtaaaatcccgctatcatggatctg-agacgggtccgggtaatatccacgaatttaattggagatgggtacaggtaagg 152  Q
    |||||| ||| ||||||||||||||||  ||||| | |||| |||| | | |||| ||||||||| |||| || |||| |||  ||||| || |||||||    
T  31440279 aaaatacccacaatgggtagggtaaaactccgcttttatgggtctggacatgggtacgggtaatacccacaaaattaaatgggtatgggcacgggtaagg 31440378  T
Q  153 gtactatactgcccag 168  Q
    ||||||||||||||||    
T  31440379 gtactatactgcccag 31440394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 349
Target Start/End: Original strand, 32422598 - 32422673
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    |||| |||| ||||||||||||||||||||||| ||| ||||||||||| | | ||||||  |||||| |||||||    
T  32422598 taaatcaaacaactacttaatacaataacaactccatcatgccggtgtataattttttaggaatatttcggatgtt 32422673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 274 - 349
Target Start/End: Complemental strand, 9205422 - 9205347
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| || | |||||||||||||||||| ||| |||  |||||| | | |||||| |||||||||||||||    
T  9205422 taaaccaaacaatttcttaatacaataacaactccatcatgttggtgtataattttttagggatattttggatgtt 9205347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 274 - 349
Target Start/End: Complemental strand, 23231983 - 23231908
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| ||||||||| ||||||||||||| ||  ||||||||||| | | ||||||  |||||| |||||||    
T  23231983 taaaccaaacaactacttattacaataacaactccaacatgccggtgtataattttttaggaatatttcggatgtt 23231908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 324
Target Start/End: Complemental strand, 20937291 - 20937241
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtaca 324  Q
    |||||||||| |||||||||||||||||||||| |||  ||||| ||||||    
T  20937291 taaaccaaaatactacttaatacaataacaactccatcgtgccgttgtaca 20937241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 168
Target Start/End: Original strand, 32422426 - 32422492
Alignment:
Q  102 acgggtccgggtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgcccag 168  Q
    |||||| ||||||||| |||| || |||| |||  ||||| || |||||||||||||||||||||||    
T  32422426 acgggtacgggtaatacccacaaaattaaatgggtatgggcacgggtaagggtactatactgcccag 32422492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 349
Target Start/End: Original strand, 31440499 - 31440564
Alignment:
Q  284 aactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    |||| |||||||||||||||||| ||| ||||||||||| | | ||||||  |||||| |||||||    
T  31440499 aactgcttaatacaataacaactccatcatgccggtgtataattttttaggaatatttcggatgtt 31440564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 87
Target Start/End: Original strand, 44070088 - 44070121
Alignment:
Q  54 aaaatatccataatgggtagggtaaaatcccgct 87  Q
    ||||||| ||||||||||||||||||||||||||    
T  44070088 aaaatattcataatgggtagggtaaaatcccgct 44070121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 181
Target Start/End: Original strand, 44070131 - 44070176
Alignment:
Q  137 atgggtacaggtaagggtactatactgcccag-cccgcaaccccgc 181  Q
    ||||| || ||||||||||||||||||||||| |||||||||||||    
T  44070131 atgggcacgggtaagggtactatactgcccagacccgcaaccccgc 44070176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 349
Target Start/End: Complemental strand, 4481290 - 4481230
Alignment:
Q  289 cttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    |||||||||||||||||| ||| ||||||||||| | | ||||||  |||||| |||||||    
T  4481290 cttaatacaataacaactccatcatgccggtgtataattttttaggaatatttcggatgtt 4481230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 83; Significance: 3e-39; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 13 - 181
Target Start/End: Original strand, 33067076 - 33067246
Alignment:
Q  13 tagggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggatctga-gacgggtccgg 111  Q
    ||||||||||||||| || ||||  |||||||||  | ||||||||| |||||||||||||||||||| ||| ||||||||| ||||| |||||||||||    
T  33067076 tagggatgacaattggacccaggtccaatgaatacccgcataaaatacccataatgggtagggtaaaacccctctatcatgggtctgaggacgggtccgg 33067175  T
Q  112 gtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgcccag-cccgcaaccccgc 181  Q
    |||||| |||| ||||||| |||| ||||| || | ||||||||||||||||||||| |||||||||||||    
T  33067176 gtaatacccacaaatttaaatggatatgggcacggataagggtactatactgcccagccccgcaaccccgc 33067246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 51 - 181
Target Start/End: Complemental strand, 43224800 - 43224668
Alignment:
Q  51 cataaaatatccataatgggtagggtaaaatcccgctatcatggatctg-agacgggtccgggtaatatccacgaatttaattggagatgggtacaggta 149  Q
    ||||||||| ||| ||||||||||||||||  || ||||||||| |||| |||||| | ||||||||| |||||||||||| |||| ||||| || | ||    
T  43224800 cataaaatacccacaatgggtagggtaaaactccactatcatgggtctggagacggattcgggtaatacccacgaatttaaatggatatgggcacggata 43224701  T
Q  150 agggtactatactgcccag-cccgcaaccccgc 181  Q
    ||||||||||||||||||| |||||||||||||    
T  43224700 agggtactatactgcccagccccgcaaccccgc 43224668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 259 - 349
Target Start/End: Complemental strand, 43224590 - 43224500
Alignment:
Q  259 gcctaaactagaacctaaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    |||||||||| |||||||||||| ||||| ||||||||| |||||||| |||| |||||||||||| | ||||||||||||||||||||||    
T  43224590 gcctaaactaaaacctaaaccaataaactgcttaatacagtaacaactccattctgccggtgtacaattttttagagatattttggatgtt 43224500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 181
Target Start/End: Complemental strand, 42285025 - 42284855
Alignment:
Q  13 tagggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggatct-gagacgggtccgg 111  Q
    ||||||||||| ||| || ||||| |||||||||  ||||||||||| | | |||||| || |||||| ||||||||||||| ||| | || || |||||    
T  42285025 tagggatgacatttggacccaggcccaatgaatacccacataaaatagctacaatggggagagtaaaaccccgctatcatgggtctggggatggatccgg 42284926  T
Q  112 gtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgcccag-cccgcaaccccgc 181  Q
    |||||| |||| ||||| | |||  ||||| || | ||||||||||||||||||||| |||||||||||||    
T  42284925 gtaatacccacaaattttaatgggcatgggcacggataagggtactatactgcccagacccgcaaccccgc 42284855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 54 - 179
Target Start/End: Original strand, 5022824 - 5022951
Alignment:
Q  54 aaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgggtaatatccacgaatttaattggagatgggtacaggtaagg 152  Q
    |||||| ||| |||||||||||||||| |||||| | |||| |||| | |||||| ||||||||| |||| || |||| |||| ||||| || |||||||    
T  5022824 aaaatacccacaatgggtagggtaaaaccccgcttttatgggtctgggcacgggtacgggtaatacccacaaaattaaatggatatgggcacgggtaagg 5022923  T
Q  153 gtactatactgcccag-cccgcaacccc 179  Q
    |||||||||||||||| |||||||||||    
T  5022924 gtactatactgcccagacccgcaacccc 5022951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 13 - 171
Target Start/End: Complemental strand, 9478082 - 9477917
Alignment:
Q  13 tagggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggatct-------gagacgg 105  Q
    ||||||||||||||| || ||||| || || |||  ||||||||||||||| ||||||||||| |||| ||||||||||||| |||       | |||||    
T  9478082 tagggatgacaattggacccaggcccagtggatacccacataaaatatccacaatgggtagggaaaaaccccgctatcatgggtctggggacggggacgg 9477983  T
Q  106 gtccgggtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgcccagccc 171  Q
    |  ||||||||| |||||||||||| | || ||||| || ||||||||||||| |||| |||||||    
T  9477982 ggacgggtaatagccacgaatttaaattgatatgggcacgggtaagggtactacactgtccagccc 9477917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 54 - 177
Target Start/End: Original strand, 35092374 - 35092499
Alignment:
Q  54 aaaatatccataatgggtagggtaaaatcccgctatcatggatctgagac-gggtccgggtaatatccacgaatttaattggagatgggtacaggtaagg 152  Q
    |||||||||| |||||||||||||||| |||||| | |||| |||| ||  |||| ||||||||| |||| || |||| |||| ||||| || |||||||    
T  35092374 aaaatatccacaatgggtagggtaaaaccccgcttttatgggtctgggaaagggtacgggtaatacccacaaaattaaatggatatgggcacgggtaagg 35092473  T
Q  153 gtactatactgcccag-cccgcaacc 177  Q
    |||||||||||||||| |||||||||    
T  35092474 gtactatactgcccagacccgcaacc 35092499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 270 - 342
Target Start/End: Original strand, 3551386 - 3551458
Alignment:
Q  270 aacctaaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatatttt 342  Q
    ||||||||||||||||||||||||||||||||||||| |||| || ||||||||| | |||||| ||||||||    
T  3551386 aacctaaaccaaaaaactacttaatacaataacaactccattctgtcggtgtacaattttttagggatatttt 3551458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 51 - 162
Target Start/End: Original strand, 43702042 - 43702154
Alignment:
Q  51 cataaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgggtaatatccacgaatttaattggagatgggtacaggta 149  Q
    ||||||||| ||| |||||||||||||||| || |||||||||| | || | |||||||||||||||| |||||||||||| |||| ||||| || ||||    
T  43702042 cataaaatacccacaatgggtagggtaaaaccctgctatcatgggtttggggacgggtccgggtaatacccacgaatttaaatggatatgggcacgggta 43702141  T
Q  150 agggtactatact 162  Q
    | |||| ||||||    
T  43702142 aaggtattatact 43702154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 168
Target Start/End: Complemental strand, 39415044 - 39414929
Alignment:
Q  54 aaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgggtaatatccacgaatttaattggagatgggtacaggtaagg 152  Q
    |||||| ||| ||||||||| |||||| |||||| | |||| |||||| |||||| |||||||||||||| || |||| |||  ||||| || |||||||    
T  39415044 aaaatacccacaatgggtagcgtaaaaccccgcttttatgggtctgagcacgggtacgggtaatatccacaaaattaaatgggtatgggcacgggtaagg 39414945  T
Q  153 gtactatactgcccag 168  Q
    ||||||||||||||||    
T  39414944 gtactatactgcccag 39414929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 54 - 178
Target Start/End: Complemental strand, 19805505 - 19805379
Alignment:
Q  54 aaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgggtaatatccacgaatttaattggagatgggtacaggtaagg 152  Q
    |||||||||| ||||| ||||||||||||||||| | ||||||||| | |||||| |||||||||||||| || |||| |||  | ||| || |||||||    
T  19805505 aaaatatccacaatggatagggtaaaatcccgcttttatggatctgggcacgggtacgggtaatatccacaaaattaaatgggtacgggcacgggtaagg 19805406  T
Q  153 gtactatactgcccag-cccgcaaccc 178  Q
     ||||||||| ||||| ||||||||||    
T  19805405 atactatactacccagacccgcaaccc 19805379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 181
Target Start/End: Original strand, 12920633 - 12920762
Alignment:
Q  54 aaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgggtaatatccacgaatttaattggagatgggtacaggtaagg 152  Q
    |||||| ||| |||||||||||||||| |||||| | ||||||||| | |||||| ||||||||| |||| || |||| ||   ||||| || |||||||    
T  12920633 aaaatacccacaatgggtagggtaaaaccccgcttttatggatctgggcacgggtacgggtaatacccacaaaattaaatgagtatgggcacgggtaagg 12920732  T
Q  153 gtactatactgcccag-cccgcaaccccgc 181  Q
    ||| |||||||||||| |||||||||||||    
T  12920733 gtattatactgcccagacccgcaaccccgc 12920762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 31455412 - 31455256
Alignment:
Q  13 tagggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgg 111  Q
    ||||||||||||||| || ||| | ||||| |||  | || |||||| ||| |||| ||||||||||| | |||| | ||||||||| | |||||| |||    
T  31455412 tagggatgacaattggacccagacccaatggatacccgcaaaaaatacccacaatgagtagggtaaaacctcgcttttatggatctgggcacgggtacgg 31455313  T
Q  112 gtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgcccag 168  Q
    |||||| |||| || |||| |||  ||||| || |||||||||||||||||||||||    
T  31455312 gtaatacccacaaaattaaatgggtatgggcacgggtaagggtactatactgcccag 31455256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 54 - 168
Target Start/End: Complemental strand, 16568046 - 16567931
Alignment:
Q  54 aaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgggtaatatccacgaatttaattggagatgggtacaggtaagg 152  Q
    |||||| ||| |||||||||||||||| |||||| | |||| |||| | |||||| ||||||||| |||| || |||| |||  ||||| || |||||||    
T  16568046 aaaatacccacaatgggtagggtaaaaccccgcttttatgggtctgggcacgggtacgggtaatacccacaaaattaaatgggtatgggcacgggtaagg 16567947  T
Q  153 gtactatactgcccag 168  Q
    ||||||||||||||||    
T  16567946 gtactatactgcccag 16567931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 54 - 168
Target Start/End: Original strand, 16597616 - 16597731
Alignment:
Q  54 aaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgggtaatatccacgaatttaattggagatgggtacaggtaagg 152  Q
    |||||| ||| |||||||||||||||| |||||| | |||| |||| | |||||| ||||||||| |||| || |||| |||  ||||| || |||||||    
T  16597616 aaaatacccacaatgggtagggtaaaaccccgcttttatgggtctgggcacgggtacgggtaatacccacaaaattaaatgggtatgggcacgggtaagg 16597715  T
Q  153 gtactatactgcccag 168  Q
    ||||||||||||||||    
T  16597716 gtactatactgcccag 16597731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 274 - 349
Target Start/End: Complemental strand, 39414822 - 39414747
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| ||||||||||||||||||||||| ||| ||||||||||| | | ||||||| |||||| |||||||    
T  39414822 taaaccaaacaactacttaatacaataacaactccatcatgccggtgtataattttttagaaatatttcggatgtt 39414747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 54 - 168
Target Start/End: Complemental strand, 46181692 - 46181577
Alignment:
Q  54 aaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgggtaatatccacgaatttaattggagatgggtacaggtaagg 152  Q
    |||||| ||| |||||||||||||||| |||||| | |||| |||| | |||||| ||||||||| |||| || |||| |||  ||||| || |||||||    
T  46181692 aaaatacccacaatgggtagggtaaaaccccgcttttatgggtctgggcacgggtacgggtaatacccacaaaattaaatgggtatgggcacgggtaagg 46181593  T
Q  153 gtactatactgcccag 168  Q
    ||||||||||||||||    
T  46181592 gtactatactgcccag 46181577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 171
Target Start/End: Original strand, 3551176 - 3551294
Alignment:
Q  54 aaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgggtaatatccacgaatttaattggagatgggtacaggtaagg 152  Q
    |||||| ||| |||||||||||||||| |||||| |||||| | || | ||||||| |||||||| || | ||||||| |||  ||||| || |||||||    
T  3551176 aaaatacccacaatgggtagggtaaaaccccgctttcatgggtttgggcacgggtctgggtaatacccgcaaatttaaatgggtatgggcacgggtaagg 3551275  T
Q  153 gtactatactgcccagccc 171  Q
    |||||||||| ||||||||    
T  3551276 gtactatactacccagccc 3551294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 349
Target Start/End: Original strand, 33067323 - 33067413
Alignment:
Q  259 gcctaaactagaacctaaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    |||||||||| ||| ||||||| |||| | ||||||||||||| |||| |||  |||||||||||| | ||| ||||||||||||||||||    
T  33067323 gcctaaactaaaacataaaccagaaaattgcttaatacaataaaaactccatcttgccggtgtacaatttttaagagatattttggatgtt 33067413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 54 - 181
Target Start/End: Original strand, 10065892 - 10066021
Alignment:
Q  54 aaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgggtaatatccacgaatttaattggagatgggtacaggtaagg 152  Q
    |||||| ||| |||||||||||||||| |||||| |||||| |||| | |||||| ||||||||| |||| || | || |||  ||||| || | |||||    
T  10065892 aaaatacccacaatgggtagggtaaaaccccgctttcatgggtctgggcacgggtgcgggtaatacccacaaaataaaatgggtatgggcacggataagg 10065991  T
Q  153 gtactatactgcccag-cccgcaaccccgc 181  Q
     ||||||||||||||| |||||||||||||    
T  10065992 atactatactgcccagacccgcaaccccgc 10066021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 260 - 349
Target Start/End: Original strand, 43702259 - 43702348
Alignment:
Q  260 cctaaactagaacctaaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    |||||| || ||||||||| ||||||||  |||||||||||||||||  ||  ||| |||||||| | ||||||||||||||||||||||    
T  43702259 cctaaattaaaacctaaacaaaaaaactgtttaatacaataacaactctatcctgcaggtgtacaattttttagagatattttggatgtt 43702348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 349
Target Start/End: Original strand, 5023046 - 5023121
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| |||| |||||||||||||||||  ||| ||||||||||| | | |||||| |||||||||||||||    
T  5023046 taaaccaaacaactgcttaatacaataacaaccccatcatgccggtgtataattttttagggatattttggatgtt 5023121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 349
Target Start/End: Complemental strand, 16567824 - 16567749
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| ||||||||||||||||||||||| ||| ||||||||||| | | ||||||  |||||| |||||||    
T  16567824 taaaccaaacaactacttaatacaataacaactccatcatgccggtgtataattttttaggaatatttcggatgtt 16567749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 349
Target Start/End: Original strand, 16597838 - 16597913
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| ||||||||||||||||||||||| ||| ||||||||||| | | ||||||  |||||| |||||||    
T  16597838 taaaccaaacaactacttaatacaataacaactccatcatgccggtgtataattttttaggaatatttcggatgtt 16597913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 349
Target Start/End: Complemental strand, 46181470 - 46181395
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| ||||||||||||||||||||||| ||| ||||||||||| | | ||||||  |||||| |||||||    
T  46181470 taaaccaaacaactacttaatacaataacaactccatcatgccggtgtataattttttaggaatatttcggatgtt 46181395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 349
Target Start/End: Complemental strand, 42284776 - 42284687
Alignment:
Q  260 cctaaactagaacctaaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| |||||||| |||||||||||||||||||||||||| | |||  ||   ||||||| | ||||| |||||||||| |||||    
T  42284776 cctaaactaaaacctaaatcaaaaaactacttaatacaataacaattacatcctgttagtgtacaatattttaaagatattttgaatgtt 42284687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 349
Target Start/End: Complemental strand, 9477887 - 9477828
Alignment:
Q  290 ttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||||||||||| |||  |||||||||||| | ||||||||||||||| ||||||    
T  9477887 ttaatacaataacaactccatcctgccggtgtacaattttttagagatattttagatgtt 9477828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 349
Target Start/End: Complemental strand, 27398846 - 27398771
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| |||| |||||||||||||||||| ||| ||||||||||| | | ||||||  |||||| |||||||    
T  27398846 taaaccaaacaactgcttaatacaataacaactccatcatgccggtgtataattttttaggaatatttcggatgtt 27398771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 349
Target Start/End: Complemental strand, 31455157 - 31455082
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| || | |||||||||||||||||||||| ||||||||||| | | ||||||  |||||| |||||||    
T  31455157 taaaccaaacaattgcttaatacaataacaacttcatcatgccggtgtataattttttaggaatatttcggatgtt 31455082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 322
Target Start/End: Complemental strand, 19805284 - 19805236
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgta 322  Q
    ||||||||| |||| |||||||||||||||||| ||| |||||||||||    
T  19805284 taaaccaaacaactgcttaatacaataacaactccatcatgccggtgta 19805236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 274 - 349
Target Start/End: Original strand, 35092594 - 35092669
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| |||| |||| ||||||||||||| ||| ||| || |||| | | |||||| |||||||||||||||    
T  35092594 taaaccaaacaactgcttattacaataacaactccatcatgtcgatgtataattttttagggatattttggatgtt 35092669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 181
Target Start/End: Complemental strand, 46783589 - 46783418
Alignment:
Q  12 atagggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccg 110  Q
    |||||||||||||||| || |||   |||||  ||| | || ||||||  || ||||| |||| |||||||||||| | |||| |||| | || ||| |     
T  46783589 atagggatgacaattggacccagatccaatgggtatccgcaaaaaatactcacaatggataggataaaatcccgcttttatgggtctgggcacaggtaca 46783490  T
Q  111 ggtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgcccag-cccgcaaccccgc 181  Q
    ||||||| |||  || |||| |||| ||||| || |||||||||||||||||| |||| |||||||||||||    
T  46783489 ggtaatacccataaaattaaatggatatgggcacgggtaagggtactatactgtccagacccgcaaccccgc 46783418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 181
Target Start/End: Complemental strand, 3363356 - 3363311
Alignment:
Q  137 atgggtacaggtaagggtactatactgcccag-cccgcaaccccgc 181  Q
    ||||| || ||||||||||||||||||||||| |||||||||||||    
T  3363356 atgggcacgggtaagggtactatactgcccagacccgcaaccccgc 3363311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 2e-37; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 13 - 171
Target Start/End: Complemental strand, 7808276 - 7808117
Alignment:
Q  13 tagggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggatct-gagacgggtccgg 111  Q
    |||||||| |||||| || || | ||||||||||  | ||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||| |||    
T  7808276 tagggatggcaattggacccatgttcaatgaatacccgcataaaatatccacaatgggtagggtaaaatcccgctatcatgggtctggagacgggttcgg 7808177  T
Q  112 gtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgcccagccc 171  Q
     ||||| |||||||||||| |||  ||||| || ||||||||||||||||||||||||||    
T  7808176 ataatacccacgaatttaaatgggtatgggcacgggtaagggtactatactgcccagccc 7808117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 259 - 349
Target Start/End: Complemental strand, 6938314 - 6938224
Alignment:
Q  259 gcctaaactagaacctaaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||| |||  | |||||||||| | |||||||| |||||||||||||    
T  6938314 gcctaaactaaaacctaaaccaaaaaactgcttaatacaataacaactacatcctaccggtgtacaattttttagaggtattttggatgtt 6938224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 259 - 349
Target Start/End: Complemental strand, 7808028 - 7807938
Alignment:
Q  259 gcctaaactagaacctaaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    |||||||||| |||||||||||| |||||  ||| || | |||||||| |||| |||||||||||| | ||||||||||||||||||||||    
T  7808028 gcctaaactaaaacctaaaccaataaactgtttactatagtaacaactccattctgccggtgtacaattttttagagatattttggatgtt 7807938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 33329109 - 33328953
Alignment:
Q  13 tagggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgg 111  Q
    |||||||| |||||| || ||| | ||||| |||  | || |||||| |||||||||||||||||||| |||||| | |||| |||| | |||||| |||    
T  33329109 tagggatggcaattggacccagacccaatggatacccgcaaaaaatacccataatgggtagggtaaaaccccgcttttatgggtctgggcacgggtacgg 33329010  T
Q  112 gtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgcccag 168  Q
    |||||| |||  || |||| |||  ||||| || |||||||||||||||||||||||    
T  33329009 gtaatacccaaaaaattaaatgggtatgggcacgggtaagggtactatactgcccag 33328953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 33332121 - 33331965
Alignment:
Q  13 tagggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgg 111  Q
    |||||||| |||||| || ||| | ||||| |||  | || |||||| |||||||||||||||||||| |||||| | |||| |||| | |||||| |||    
T  33332121 tagggatggcaattggacccagacccaatggatacccgcaaaaaatacccataatgggtagggtaaaaccccgcttttatgggtctgggcacgggtacgg 33332022  T
Q  112 gtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgcccag 168  Q
    |||||| |||  || |||| |||  ||||| || |||||||||||||||||||||||    
T  33332021 gtaatacccaaaaaattaaatgggtatgggcacgggtaagggtactatactgcccag 33331965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 54 - 179
Target Start/End: Complemental strand, 31071261 - 31071134
Alignment:
Q  54 aaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgggtaatatccacgaatttaattggagatgggtacaggtaagg 152  Q
    |||||| ||| |||||||||||||||| |||||| |  ||| |||| | |||||| ||||||||| |||| || |||| |||  ||||| || |||||||    
T  31071261 aaaatacccacaatgggtagggtaaaaccccgcttttgtgggtctgggcacgggtacgggtaatacccacaaaattaaatgggtatgggcacgggtaagg 31071162  T
Q  153 gtactatactgcccag-cccgcaacccc 179  Q
    |||||||||||||||| |||||||||||    
T  31071161 gtactatactgcccagacccgcaacccc 31071134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 181
Target Start/End: Original strand, 1329158 - 1329328
Alignment:
Q  13 tagggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggatctg-agacgggtccgg 111  Q
    |||||||| |||||| || ||  ||||||| |||  | || |||||| ||| |||||||||||||||| ||| || | |||| |||| | |||||| |||    
T  1329158 tagggatggcaattgaacccatactcaatggatacccgcaaaaaatacccacaatgggtagggtaaaaccccacttttatgggtctggacacgggtacgg 1329257  T
Q  112 gtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgcccag-cccgcaaccccgc 181  Q
    |||||| |||  || |||| |||  ||||| || ||||||||||||||||||||||| |||||||||||||    
T  1329258 gtaatacccataaaattaaatgggtatgggcacgggtaagggtactatactgcccagacccgcaaccccgc 1329328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 181
Target Start/End: Original strand, 20691177 - 20691347
Alignment:
Q  13 tagggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgg 111  Q
    ||||||||||||||| ||||||   |||||   || |||| |||||| ||| |||||||||||||||| || ||| | |||| |||| | |||||| |||    
T  20691177 tagggatgacaattggactcagatccaatgggcatccacaaaaaatacccacaatgggtagggtaaaaccctgcttttatgggtctgggcacgggtgcgg 20691276  T
Q  112 gtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgcccag-cccgcaaccccgc 181  Q
    ||||||  ||| || | || |||  ||||| || ||||||||||||||||||||||| |||||||||||||    
T  20691277 gtaataaacacaaaataaaatgggtatgggcacgggtaagggtactatactgcccagacccgcaaccccgc 20691347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 167
Target Start/End: Original strand, 13532530 - 13532685
Alignment:
Q  13 tagggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgg 111  Q
    ||||||||||||||  || ||| | ||||| |||  | || |||||| ||| ||| |||||||||||| |||||| | || | |||| | |||||| |||    
T  13532530 tagggatgacaattagacccagacccaatggatacccgcaaaaaatacccacaattggtagggtaaaaccccgcttttataggtctgggcacgggtacgg 13532629  T
Q  112 gtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgccca 167  Q
     |||||||||| || |||| |||| ||||| || ||||||||||||||||||||||    
T  13532630 ataatatccacaaaattaaatggatatgggcacgggtaagggtactatactgccca 13532685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 349
Target Start/End: Original strand, 13534039 - 13534114
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| ||||||||||||||||||||||| ||| |||||| |||||| | ||||||  |||||| |||||||    
T  13534039 taaaccaaacaactacttaatacaataacaactccatcatgccgatgtacaattttttaggaatatttcggatgtt 13534114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 28770090 - 28770011
Alignment:
Q  270 aacctaaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||  |||||||||||||||||||||||||||||||  ||||| |||||| |  ||||| |||||||| ||||||    
T  28770090 aacctaaataaaaaaactacttaatacaataacaacttcatcttgccgatgtacaattgtttagggatattttagatgtt 28770011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 349
Target Start/End: Complemental strand, 31071052 - 31070977
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| |||| ||||||| |||||||||| ||| ||||| ||||| | | ||||||||||||||||||||||    
T  31071052 taaaccaaacaactgcttaataaaataacaactccatcatgccagtgtataattttttagagatattttggatgtt 31070977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 349
Target Start/End: Complemental strand, 33328846 - 33328771
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| ||||||||||||||||||||||| ||| ||||||||||| | | ||||||  |||||| |||||||    
T  33328846 taaaccaaacaactacttaatacaataacaactccatcatgccggtgtataattttttaggaatatttcggatgtt 33328771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 349
Target Start/End: Complemental strand, 33331858 - 33331783
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| ||||||||||||||||||||||| ||| ||||||||||| | | ||||||  |||||| |||||||    
T  33331858 taaaccaaacaactacttaatacaataacaactccatcatgccggtgtataattttttaggaatatttcggatgtt 33331783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 349
Target Start/End: Complemental strand, 12429683 - 12429606
Alignment:
Q  272 cctaaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||||||||||  |||||||||||||||||| || ||||  || |||| | ||||| ||||||||||||||||    
T  12429683 cctaaaccaaaaaactctttaatacaataacaactttatcatgctagtttacaattttttaaagatattttggatgtt 12429606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 51 - 130
Target Start/End: Complemental strand, 6938506 - 6938426
Alignment:
Q  51 cataaaatatccataatgggtagggtaaaatcccgctatcatggatct-gagacgggtccgggtaatatccacgaatttaa 130  Q
    |||||| ||||||||||||||||| ||||| |||||||| |||| ||| | ||||||||| | ||||| ||||||||||||    
T  6938506 cataaattatccataatgggtaggataaaaccccgctataatgggtctggggacgggtccagataatacccacgaatttaa 6938426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 274 - 349
Target Start/End: Original strand, 31783835 - 31783911
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgta-cagtcttttagagatattttggatgtt 349  Q
    ||||||||| |||| |||||||||||||||||| ||| |||||||||||  | | |||||| |||||||||||||||    
T  31783835 taaaccaaacaactgcttaatacaataacaactccatcatgccggtgtataatttttttagggatattttggatgtt 31783911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 349
Target Start/End: Original strand, 1329412 - 1329487
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| ||||  ||||||||||||||||| ||| ||| ||||||| | | |||||| |||||||||||||||    
T  1329412 taaaccaaacaactgtttaatacaataacaactccatcatgtcggtgtataattttttagggatattttggatgtt 1329487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 171
Target Start/End: Complemental strand, 28770303 - 28770145
Alignment:
Q  13 tagggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggatct-gagacgggtccgg 111  Q
    |||||||| |||||| || ||  | |||||||||  | || |||||||||| |||||||| |||||||||||||| |||| | | | || || |||||||    
T  28770303 tagggatggcaattggacccaaacccaatgaatacccgcaaaaaatatccacaatgggtatggtaaaatcccgctttcataggtatggacacaggtccgg 28770204  T
Q  112 gtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgcccagccc 171  Q
    |||||| |||| ||||| | |||  ||||  || ||||||||||||||||| ||||||||    
T  28770203 gtaatacccacaaatttta-tgggtatggacacgggtaagggtactatactacccagccc 28770145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 349
Target Start/End: Original strand, 29641330 - 29641390
Alignment:
Q  289 cttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    |||||||||||||||||| ||| ||| ||||||| | | |||||| |||||||||||||||    
T  29641330 cttaatacaataacaactccatcatgacggtgtataattttttagggatattttggatgtt 29641390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 349
Target Start/End: Original strand, 31511509 - 31511569
Alignment:
Q  289 cttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    |||||||||||||||||| ||| ||| ||||||| | | |||||| |||||||||||||||    
T  31511509 cttaatacaataacaactccatcatgtcggtgtataattttttagggatattttggatgtt 31511569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 54 - 159
Target Start/End: Original strand, 29640399 - 29640506
Alignment:
Q  54 aaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgggtaatatccac-gaatttaattggagatgggtacaggtaag 151  Q
    |||||||||| |||||||||||||||| |||||| | || | |||||| |||||| ||| ||||| ||||  ||||||| |||  ||||| || ||||||    
T  29640399 aaaatatccacaatgggtagggtaaaaccccgcttttataggtctgagcacgggtacggataatacccacaaaatttaaatgggtatgggcacgggtaag 29640498  T
Q  152 ggtactat 159  Q
    ||||||||    
T  29640499 ggtactat 29640506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 270 - 304
Target Start/End: Original strand, 31555805 - 31555839
Alignment:
Q  270 aacctaaaccaaaaaactacttaatacaataacaa 304  Q
    |||||||||| ||||||||||||||||||||||||    
T  31555805 aacctaaacctaaaaactacttaatacaataacaa 31555839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 162
Target Start/End: Complemental strand, 12429895 - 12429783
Alignment:
Q  51 cataaaatatccataatgggtagggtaaaatcccgctatcatggatct-gagacgggtccgggtaatatccacgaatttaattggagatgggtacaggta 149  Q
    ||||||||||||| |||| |||| ||||||||  |||| ||||| ||| |||| || || |||||||| | |||||||||| | |  ||||| || | ||    
T  12429895 cataaaatatccacaatgagtagagtaaaatcatgctaccatgggtctggagatggatctgggtaataccaacgaatttaaataggtatgggcacggata 12429796  T
Q  150 agggtactatact 162  Q
    |||||||||||||    
T  12429795 agggtactatact 12429783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 165
Target Start/End: Original strand, 31783656 - 31783752
Alignment:
Q  70 gtagggtaaaatcccgctatcatggatctgag-acgggtccgggtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgcc 165  Q
    ||||||||||| |||||| | |||| |||| | | |||| ||||||||| |||| || |||| |||  ||||| || ||||||||||||||||||||    
T  31783656 gtagggtaaaaccccgcttttatgggtctgggcatgggtacgggtaatacccacaaaattaaatgggtatgggcacgggtaagggtactatactgcc 31783752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 2e-37; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 13 - 171
Target Start/End: Complemental strand, 29456304 - 29456145
Alignment:
Q  13 tagggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggatct-gagacgggtccgg 111  Q
    |||||||| |||||| || ||||| ||||| |||  | ||||||||||||| |||||||||||||||||||||||||||||||||| | |||||||||||    
T  29456304 tagggatggcaattggacccaggcccaatggatacccgcataaaatatccacaatgggtagggtaaaatcccgctatcatggatctggggacgggtccgg 29456205  T
Q  112 gtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgcccagccc 171  Q
    |||||| |||||||||| | |||| ||||| || | ||||| ||||||||||||||||||    
T  29456204 gtaatacccacgaattttaatggatatgggcacggataaggatactatactgcccagccc 29456145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 13 - 181
Target Start/End: Complemental strand, 7978545 - 7978375
Alignment:
Q  13 tagggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgg 111  Q
    ||||||||||||||| || ||||| ||||  |||  | ||||||||| ||| |||||||||||||||| ||||||||||||| |||| | ||| ||||||    
T  7978545 tagggatgacaattggacccaggcccaattgatacccgcataaaatacccacaatgggtagggtaaaaccccgctatcatgggtctggggacgagtccgg 7978446  T
Q  112 gtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgcccag-cccgcaaccccgc 181  Q
    |||||| |||| ||||||| |||| ||||| || | ||||||||||||||||||||| |||||||||||||    
T  7978445 gtaatacccacaaatttaaatggatatgggcacggataagggtactatactgcccagccccgcaaccccgc 7978375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 13 - 171
Target Start/End: Complemental strand, 18595874 - 18595715
Alignment:
Q  13 tagggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgg 111  Q
    |||||||| |||||| || ||||| ||||| |||  | |||||||||  || |||||||||| ||||||||||||||||||| |||| | ||||||||||    
T  18595874 tagggatggcaattggacccaggcccaatggatacccgcataaaatactcacaatgggtaggataaaatcccgctatcatgggtctggggacgggtccgg 18595775  T
Q  112 gtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgcccagccc 171  Q
     |||||||||||||||||| |||  ||| | || ||||||||||||||||||||||||||    
T  18595774 ataatatccacgaatttaaatgggtatgagcacgggtaagggtactatactgcccagccc 18595715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 51 - 171
Target Start/End: Original strand, 22631878 - 22631999
Alignment:
Q  51 cataaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgggtaatatccacgaatttaattggagatgggtacaggta 149  Q
    ||||||||||||| ||||||||||||||||  |||||||||||  |||| | ||||||| |||||||| |||||||||||| |||  ||||| |||||||    
T  22631878 cataaaatatccacaatgggtagggtaaaactccgctatcatgtgtctggggacgggtctgggtaatacccacgaatttaaatgggtatgggcacaggta 22631977  T
Q  150 agggtactatactgcccagccc 171  Q
    ||||||||||||||||||||||    
T  22631978 agggtactatactgcccagccc 22631999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 51 - 181
Target Start/End: Complemental strand, 14088139 - 14088007
Alignment:
Q  51 cataaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgggtaatatccacgaatttaattggagatgggtacaggta 149  Q
    ||||||||| |||  |||| |||||||||| ||||||||||||| | || | |||||||||||||||| |||||||||||| |||  |||||||| ||||    
T  14088139 cataaaatacccacgatggatagggtaaaaccccgctatcatgggtatggggacgggtccgggtaatacccacgaatttaaatgggtatgggtacgggta 14088040  T
Q  150 agggtactatactgcccag-cccgcaaccccgc 181  Q
    ||||||||||||||||||| |||||||||||||    
T  14088039 agggtactatactgcccagccccgcaaccccgc 14088007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 259 - 349
Target Start/End: Original strand, 6224687 - 6224777
Alignment:
Q  259 gcctaaactagaacctaaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    |||||||||| |||||||||||||||||  |||||||||||||||||| |||  ||| |||||||| | ||||||||||||||||||||||    
T  6224687 gcctaaactaaaacctaaaccaaaaaacagcttaatacaataacaactccatcctgctggtgtacaatattttagagatattttggatgtt 6224777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 261 - 349
Target Start/End: Complemental strand, 14087927 - 14087839
Alignment:
Q  261 ctaaactagaacctaaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    |||||||| |||||||||||| ||||| ||||||||| |||||||| |||| | |||||||||| | ||||||||||||||||||||||    
T  14087927 ctaaactaaaacctaaaccaataaactgcttaatacagtaacaactccattctaccggtgtacaattttttagagatattttggatgtt 14087839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 14645830 - 14645674
Alignment:
Q  13 tagggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgg 111  Q
    |||||||| |||||| || ||| | ||||| |||  | || |||||| ||| |||||||||||||||| |||||| | ||||||||| | |||||| |||    
T  14645830 tagggatggcaattggacccagacccaatggatacccgcaaaaaatacccacaatgggtagggtaaaaccccgcttttatggatctgggcacgggtacgg 14645731  T
Q  112 gtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgcccag 168  Q
    |||||| |||| || |||| |||| ||||| || |||||||||||||||||||||||    
T  14645730 gtaatacccacaaaattaaatggatatgggcacgggtaagggtactatactgcccag 14645674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 13 - 181
Target Start/End: Original strand, 31149296 - 31149466
Alignment:
Q  13 tagggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggatctgagacgg-gtccgg 111  Q
    ||||||||||||||| || ||| | ||||| |||  |  |||||||| ||| ||||| |||||||||| || |||||||||| |||| ||  | ||||||    
T  31149296 tagggatgacaattggacccagacccaatggatacccgtataaaatacccacaatggatagggtaaaaccctgctatcatgggtctgggaatgagtccgg 31149395  T
Q  112 gtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgcccagccc-gcaaccccgc 181  Q
    |||||| |||| ||||||| ||   ||||| || |||||||||||||||||||||||||| ||||||||||    
T  31149396 gtaatacccacaaatttaaatgagtatgggcacgggtaagggtactatactgcccagccctgcaaccccgc 31149466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 65 - 179
Target Start/End: Complemental strand, 41983696 - 41983580
Alignment:
Q  65 aatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgggtaatatccacgaatttaattggagatgggtacaggtaagggtactatactg 163  Q
    |||||||||||||||| ||||||||||| | |||| | |||||  |||||||||||||||||||||| |||  ||||  ||||||||||||||| |||||    
T  41983696 aatgggtagggtaaaaccccgctatcataggtctggggacggggacgggtaatatccacgaatttaaatgggtatggacacaggtaagggtactttactg 41983597  T
Q  164 cccag-cccgcaacccc 179  Q
     |||| |||||||||||    
T  41983596 tccagtcccgcaacccc 41983580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 259 - 342
Target Start/End: Complemental strand, 29456057 - 29455974
Alignment:
Q  259 gcctaaactagaacctaaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatatttt 342  Q
    |||||||||| || ||||||||||||||| |||||||||||||||||| |||  ||| |||||||| | |||||||||||||||    
T  29456057 gcctaaactaaaatctaaaccaaaaaactgcttaatacaataacaactccatcctgctggtgtacaatattttagagatatttt 29455974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 65 - 181
Target Start/End: Complemental strand, 14088730 - 14088612
Alignment:
Q  65 aatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgggtaatatccacgaatttaattggagatgggtacaggtaagggtactatactg 163  Q
    |||||||||||||||| |||||| | |||| |||| | |||||| ||||||||| |||| || |||| |||  ||||| || ||||||||||||||||||    
T  14088730 aatgggtagggtaaaaccccgcttttatgggtctgggcacgggtacgggtaatacccacaaaattaaatgggtatgggcacgggtaagggtactatactg 14088631  T
Q  164 cccag-cccgcaaccccgc 181  Q
    ||||| |||||||||||||    
T  14088630 cccagacccgcaaccccgc 14088612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 274 - 349
Target Start/End: Complemental strand, 14088519 - 14088444
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| |||| |||||||||||||||||| ||| ||||||||||| | | |||||| |||||||||||||||    
T  14088519 taaaccaaacaactgcttaatacaataacaactccatcatgccggtgtataattttttagggatattttggatgtt 14088444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 274 - 349
Target Start/End: Original strand, 15719048 - 15719123
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||| | | ||||||  |||||| |||||||    
T  15719048 taaaccaaacaactacttaatacaataacaacttcatcatgccggtgtataattttttaggaatatttcggatgtt 15719123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 349
Target Start/End: Complemental strand, 18595627 - 18595537
Alignment:
Q  259 gcctaaactagaacctaaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    |||||||||| ||||||||||| |||| |  ||||||||||||||||| |||  || ||||||||| | ||| ||||||||||||||||||    
T  18595627 gcctaaactaaaacctaaaccagaaaattgtttaatacaataacaactccatcttggcggtgtacaatttttaagagatattttggatgtt 18595537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 349
Target Start/End: Original strand, 36470342 - 36470432
Alignment:
Q  259 gcctaaactagaacctaaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    |||||||||  ||||||||  |||||||||||||||||||||||||||||||  ||||| |||||| |  ||||| |||||||| ||||||    
T  36470342 gcctaaactcaaacctaaataaaaaaactacttaatacaataacaacttcatcttgccgatgtacaattgtttagggatattttagatgtt 36470432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 259 - 349
Target Start/End: Complemental strand, 7978298 - 7978207
Alignment:
Q  259 gcctaaactagaacctaaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtctttt-agagatattttggatgtt 349  Q
    |||||||||| ||| |||||||| ||||| ||||||||| |||||||| |||| ||||||||| || | |||| |||||||||||| |||||    
T  7978298 gcctaaactaaaacttaaaccaataaactgcttaatacagtaacaactccattctgccggtgtgcaatttttttagagatattttgaatgtt 7978207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 259 - 349
Target Start/End: Original strand, 22632088 - 22632178
Alignment:
Q  259 gcctaaactagaacctaaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    |||||||||| ||||||||| ||| ||||  ||||||||||||||||| |||  ||| ||||||||   ||||||||||||||| ||||||    
T  22632088 gcctaaactaaaacctaaacaaaagaactgtttaatacaataacaactccatcctgctggtgtacaactttttagagatatttttgatgtt 22632178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 349
Target Start/End: Complemental strand, 14645567 - 14645492
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| |||| |||||||||||||||||| ||| ||||||||||| | | ||||||  |||||| |||||||    
T  14645567 taaaccaaacaactgcttaatacaataacaactccatcatgccggtgtataattttttaggaatatttcggatgtt 14645492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 263 - 306
Target Start/End: Original strand, 31149540 - 31149583
Alignment:
Q  263 aaactagaacctaaaccaaaaaactacttaatacaataacaact 306  Q
    |||||| |||||||||||||||||| ||||||||||||||||||    
T  31149540 aaactaaaacctaaaccaaaaaactgcttaatacaataacaact 31149583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 282 - 349
Target Start/End: Complemental strand, 41983491 - 41983424
Alignment:
Q  282 aaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    |||||| |||||||||||||||||  |||  |||| ||||||| | ||||||||||||||||||||||    
T  41983491 aaaactgcttaatacaataacaaccccatcctgcctgtgtacaattttttagagatattttggatgtt 41983424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 181
Target Start/End: Original strand, 6224503 - 6224609
Alignment:
Q  75 gtaaaatcccgctatcatggatctgag-acgggtccgggtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgcccag-cccg 172  Q
    |||||| ||||||||||||| |||| | | |||||||||||||| |||| ||||| | |||  ||||| || ||||||  ||||||||||||||| ||||    
T  6224503 gtaaaaccccgctatcatgggtctggggaagggtccgggtaatacccacaaattttaatgggtatgggcacgggtaag--tactatactgcccagccccg 6224600  T
Q  173 caaccccgc 181  Q
    |||||||||    
T  6224601 caaccccgc 6224609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 349
Target Start/End: Complemental strand, 41616829 - 41616764
Alignment:
Q  284 aactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    |||| |||||||||||||||||| ||| ||||||||||| | | ||||||  |||||| |||||||    
T  41616829 aactgcttaatacaataacaactccatcatgccggtgtataattttttaggaatatttcggatgtt 41616764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 79; Significance: 7e-37; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 13 - 181
Target Start/End: Complemental strand, 25500563 - 25500393
Alignment:
Q  13 tagggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgg 111  Q
    ||||||||||||||| || ||||| ||||| |||  | ||||||||| ||| ||| ||||||||||||  |||||||||||| |||| | ||||||||||    
T  25500563 tagggatgacaattggacccaggcccaatggatacccgcataaaatacccacaataggtagggtaaaactccgctatcatgggtctggggacgggtccgg 25500464  T
Q  112 gtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgcccagccc-gcaaccccgc 181  Q
    |||||| ||||||||||||||| ||||||| ||||||||||||| ||||||| ||||||| ||||||||||    
T  25500463 gtaatacccacgaatttaattgaagatgggcacaggtaagggtattatactgtccagccctgcaaccccgc 25500393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 13 - 181
Target Start/End: Original strand, 24891045 - 24891215
Alignment:
Q  13 tagggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgg 111  Q
    |||| |||||||||| || ||||| ||| | |||  | ||||||||| ||| |||||||||||||||| ||||||||||||| |||| | | ||||||||    
T  24891045 taggcatgacaattggacccaggcccaacggatacccgcataaaatacccacaatgggtagggtaaaaccccgctatcatgggtctggggatgggtccgg 24891144  T
Q  112 gtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgcccag-cccgcaaccccgc 181  Q
    |||||| |||| |||||||||| ||||||| || |||||||||| |||||||||||| |||||||||||||    
T  24891145 gtaatacccacaaatttaattgaagatgggcacgggtaagggtattatactgcccagccccgcaaccccgc 24891215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 13 - 171
Target Start/End: Original strand, 2620557 - 2620716
Alignment:
Q  13 tagggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggatct-gagacgggtccgg 111  Q
    |||||||| |||||| || ||||| ||||| |||  | ||||||||||||| |||||||||||||||| ||||||||||||| ||| | |||||||||||    
T  2620557 tagggatggcaattggacccaggcccaatggatacccgcataaaatatccacaatgggtagggtaaaaccccgctatcatgggtctggggacgggtccgg 2620656  T
Q  112 gtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgcccagccc 171  Q
    |||||| |||||||||| | |||  ||||| || | ||||| ||||||||||||||||||    
T  2620657 gtaatacccacgaattttaatgggcatgggcacggataaggatactatactgcccagccc 2620716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 54 - 181
Target Start/End: Complemental strand, 25419729 - 25419600
Alignment:
Q  54 aaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgggtaatatccacgaatttaattggagatgggtacaggtaagg 152  Q
    |||||| ||| ||||||||||||||||  |||||||||||| |||| | |||||||||| |||||  |||||||||||||| ||||||| ||||||||||    
T  25419729 aaaatacccacaatgggtagggtaaaactccgctatcatgggtctggggacgggtccggataatacacacgaatttaattgaagatgggcacaggtaagg 25419630  T
Q  153 gtactatactgcccag-cccgcaaccccgc 181  Q
    ||| ||||||| |||| |||||||||||||    
T  25419629 gtattatactgtccagccccgcaaccccgc 25419600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 54 - 181
Target Start/End: Complemental strand, 25428069 - 25427940
Alignment:
Q  54 aaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgggtaatatccacgaatttaattggagatgggtacaggtaagg 152  Q
    |||||| ||| ||||||||||||||||  |||||||||||| |||| | |||||||||| |||||  |||||||||||||| ||||||| ||||||||||    
T  25428069 aaaatacccacaatgggtagggtaaaactccgctatcatgggtctggggacgggtccggataatacacacgaatttaattgaagatgggcacaggtaagg 25427970  T
Q  153 gtactatactgcccag-cccgcaaccccgc 181  Q
    ||| ||||||| |||| |||||||||||||    
T  25427969 gtattatactgtccagccccgcaaccccgc 25427940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 259 - 349
Target Start/End: Original strand, 19643356 - 19643446
Alignment:
Q  259 gcctaaactagaacctaaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||||  ||| | |||||| | ||||||||||||||||||||||    
T  19643356 gcctaaactaaaacctaaaccaaaaaactgcttaatacaataacaacttcatcctgctgatgtacaattttttagagatattttggatgtt 19643446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 51 - 181
Target Start/End: Complemental strand, 6110098 - 6109966
Alignment:
Q  51 cataaaatatccataatgggtagggtaaaatcccgctatcatggatct-gagacgggtccgggtaatatccacgaatttaattggagatgggtacaggta 149  Q
    ||||||||| ||| |||||||||||||||||||| ||||||||| ||| | |||||||| |||||||| |||||||||||| | |  ||||| || ||||    
T  6110098 cataaaatacccacaatgggtagggtaaaatcccactatcatgggtctggggacgggtctgggtaatacccacgaatttaaatagttatgggcacgggta 6109999  T
Q  150 agggtactatactgccca-gcccgcaaccccgc 181  Q
    | ||||||||| |||||| ||||||||||||||    
T  6109998 aaggtactatagtgcccaggcccgcaaccccgc 6109966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 259 - 346
Target Start/End: Complemental strand, 1667432 - 1667345
Alignment:
Q  259 gcctaaactagaacctaaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggat 346  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||| |||  |||||||||||| | |||| ||||||||||||||    
T  1667432 gcctaaactaaaacctaaaccaaaaaactgcttaatacaataacaactccatcctgccggtgtacatttttttggagatattttggat 1667345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 13 - 181
Target Start/End: Original strand, 19643111 - 19643282
Alignment:
Q  13 tagggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatccc-gctatcatggatctgag-acgggtccg 110  Q
    |||||||| |||||| || || || ||||| |||  | ||||||||||||| |||||||||||||||| ||| |||||||||| |||| | ||| |||||    
T  19643111 tagggatggcaattggacccatgcccaatggatacccgcataaaatatccacaatgggtagggtaaaacccccgctatcatgggtctggggacgtgtccg 19643210  T
Q  111 ggtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgcccag-cccgcaaccccgc 181  Q
    ||||||| |||| ||||||| |||  ||||| |  ||||||||||||||||||||| | |||||||||||||    
T  19643211 ggtaatacccacaaatttaaatgggtatgggcaatggtaagggtactatactgccctgccccgcaaccccgc 19643282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 168
Target Start/End: Complemental strand, 24790025 - 24789871
Alignment:
Q  15 gggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgggt 113  Q
    |||||| |||||| || ||| | |||||||||  | || |||||||||| |||||||||||||||| |||||| | ||||||||| | |||||| |||||    
T  24790025 gggatggcaattggacccagacccaatgaatacccgcaaaaaatatccacaatgggtagggtaaaaccccgcttttatggatctgggcacgggtacgggt 24789926  T
Q  114 aatatccacgaatttaattggagatgggtacaggtaagggtactatactgcccag 168  Q
    |||| |||| || |||| |||| ||||| || ||||||| |||||||||||||||    
T  24789925 aatacccacaaaattaaatggatatgggcacgggtaaggatactatactgcccag 24789871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 263 - 349
Target Start/End: Complemental strand, 25419518 - 25419432
Alignment:
Q  263 aaactagaacctaaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    |||||| ||||||||||||||||||  ||||||||||||||||| |||  |||||||||||||| ||||| ||||||||||||||||    
T  25419518 aaactaaaacctaaaccaaaaaactgtttaatacaataacaactccatcctgccggtgtacagttttttaaagatattttggatgtt 25419432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 54 - 180
Target Start/End: Original strand, 3616505 - 3616633
Alignment:
Q  54 aaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgggtaatatccacgaatttaattggagatgggtacaggtaagg 152  Q
    |||||| ||| |||||||||||||||| |||||| | |||| |||| | |||||| ||||||||| |||| || |||| |||| ||||| || |||||||    
T  3616505 aaaatacccacaatgggtagggtaaaaccccgcttttatgggtctgggcacgggtacgggtaatacccacaaaattaaatggatatgggcacgggtaagg 3616604  T
Q  153 gtactatactgcccag-cccgcaaccccg 180  Q
    |||||||||||||||| ||||||||||||    
T  3616605 gtactatactgcccagacccgcaaccccg 3616633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 51 - 144
Target Start/End: Original strand, 2472087 - 2472181
Alignment:
Q  51 cataaaatatccataatgggtagggtaaaatcccgctatcatggatct-gagacgggtccgggtaatatccacgaatttaattggagatgggtac 144  Q
    ||||||||||||| |||||||||||||||| ||||||||||||| ||| | || |||||||||||||| |||||||||||| |||| | ||||||    
T  2472087 cataaaatatccacaatgggtagggtaaaaccccgctatcatgggtctggggaagggtccgggtaatacccacgaatttaaatggataagggtac 2472181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 259 - 342
Target Start/End: Complemental strand, 6109888 - 6109805
Alignment:
Q  259 gcctaaactagaacctaaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatatttt 342  Q
    |||||||||| ||||||||||||| |||| ||||||||||||||||||| ||  |||||||||||| | |||| ||||||||||    
T  6109888 gcctaaactaaaacctaaaccaaagaactgcttaatacaataacaactttatcctgccggtgtacaattttttggagatatttt 6109805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 24891283 - 24891361
Alignment:
Q  270 aacctaaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    |||||||||||||||||| |||||||||||||||||| |||  |||||||||| ||| ||||| ||||||||||||||||    
T  24891283 aacctaaaccaaaaaactgcttaatacaataacaactccatcctgccggtgtaaagt-ttttaaagatattttggatgtt 24891361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 259 - 349
Target Start/End: Original strand, 2620803 - 2620893
Alignment:
Q  259 gcctaaactagaacctaaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||  ||  ||  |||||||| | |||||||||||||||| |||||    
T  2620803 gcctaaactaaaacctaaaccaaaaaactgcttaatacaataacaactctatcttgttggtgtacaatattttagagatattttgaatgtt 2620893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 69 - 181
Target Start/End: Original strand, 26560887 - 26561000
Alignment:
Q  69 ggtagggtaaaatcccgctatcatggatctgag-acgggtccgggtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgccca 167  Q
    |||||||||||| ||| || ||||||||||| | |||||||||||||||| |||| ||||||| |||  ||||   ||||||| ||||||||| | ||||    
T  26560887 ggtagggtaaaacccccctttcatggatctggggacgggtccgggtaatacccacaaatttaaatgggtatggacgcaggtaaaggtactatattaccca 26560986  T
Q  168 gcccgcaaccccgc 181  Q
    ||||||||||||||    
T  26560987 gcccgcaaccccgc 26561000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 274 - 349
Target Start/End: Original strand, 3616727 - 3616802
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| |||| ||||||||||||||| || ||| ||||||||||| | | ||||||||||||||||||||||    
T  3616727 taaaccaaacaactgcttaatacaataacagctccatcatgccggtgtataattttttagagatattttggatgtt 3616802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 54 - 181
Target Start/End: Complemental strand, 30801720 - 30801591
Alignment:
Q  54 aaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgggtaatatccacgaatttaattggagatgggtacaggtaagg 152  Q
    |||||||||| |||||||| |||||||| ||||| |||||| | || | ||||||| |||||||| |||  ||||||| |||  ||||| || |||||||    
T  30801720 aaaatatccacaatgggtacggtaaaattccgctttcatgggtttgggcacgggtctgggtaatacccataaatttaaatgggtatgggcacgggtaagg 30801621  T
Q  153 gtactatactgcccag-cccgcaaccccgc 181  Q
    |||||||||| | ||| |||||||||||||    
T  30801620 gtactatactactcagccccgcaaccccgc 30801591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 270 - 342
Target Start/End: Complemental strand, 30801502 - 30801430
Alignment:
Q  270 aacctaaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatatttt 342  Q
    |||||||||||||||||||||||||||||||||||||  ||| || |||| |||| | |||||| ||||||||    
T  30801502 aacctaaaccaaaaaactacttaatacaataacaactctattctgtcggtatacaattttttagggatatttt 30801430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 349
Target Start/End: Complemental strand, 1376439 - 1376364
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    |||| |||| |||| |||||||||||||||||| ||| ||||||||||| | | |||||| |||||||||||||||    
T  1376439 taaatcaaacaactgcttaatacaataacaactccatcatgccggtgtataattttttagggatattttggatgtt 1376364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 181
Target Start/End: Complemental strand, 1667668 - 1667510
Alignment:
Q  13 tagggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggatctgagacgggtccggg 112  Q
    |||||||| |||||| || ||||| ||||| |||  | |||||| || ||| |||||||||||||||| ||||||||||| |           |||||||    
T  1667668 tagggatggcaattggacccaggcccaatggatacccgcataaattacccacaatgggtagggtaaaaccccgctatcatag-----------gtccggg 1667580  T
Q  113 taatatccacgaatttaattggagatgggtacaggtaagggtactatactgccca-gcccgcaaccccgc 181  Q
    ||||| |||||||||||| |||  ||||  || ||||| |||||||||||||| | ||||||||||||||    
T  1667579 taatacccacgaatttaaatggctatggacacgggtaaaggtactatactgcctaggcccgcaaccccgc 1667510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 181
Target Start/End: Complemental strand, 1376604 - 1376532
Alignment:
Q  110 gggtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgcccag-cccgcaaccccgc 181  Q
    |||||||| |||| || |||| |||  ||||| || ||||||||||||||||||||||| |||||||||||||    
T  1376604 gggtaatacccaccaaattaaatgggtatgggcacgggtaagggtactatactgcccagacccgcaaccccgc 1376532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 274 - 349
Target Start/End: Complemental strand, 24789764 - 24789689
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    |||| |||| |||| |||||||||||||||||| ||| ||||||||||| | | ||||||  |||||| |||||||    
T  24789764 taaatcaaacaactgcttaatacaataacaactccatcatgccggtgtataattttttaggaatatttcggatgtt 24789689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 347
Target Start/End: Original strand, 26561083 - 26561160
Alignment:
Q  270 aacctaaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatg 347  Q
    |||||||| ||||||| ||||||| ||||||||| || |||  || || |||||| | |||||| |||||||||||||    
T  26561083 aacctaaatcaaaaaagtacttaacacaataacagctccatcctgtcgatgtacaattttttagggatattttggatg 26561160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 303
Target Start/End: Complemental strand, 7057874 - 7057830
Alignment:
Q  259 gcctaaactagaacctaaaccaaaaaactacttaatacaataaca 303  Q
    |||||||||  |||||||| ||||||||||||||||| |||||||    
T  7057874 gcctaaacttaaacctaaatcaaaaaactacttaatagaataaca 7057830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 4e-32; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 13 - 181
Target Start/End: Complemental strand, 28221480 - 28221310
Alignment:
Q  13 tagggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgg 111  Q
    |||||||| |||||| || ||||| ||||| |||  | ||||||||| ||| |||||||||||||||| ||||||||||||| |||| | ||||||||||    
T  28221480 tagggatggcaattggacccaggcccaatggatacccgcataaaatagccacaatgggtagggtaaaaccccgctatcatgggtctggggacgggtccgg 28221381  T
Q  112 gtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgcccag-cccgcaaccccgc 181  Q
    |||||| |||| ||||||| |||  ||||| ||  |||||||||||||||||||||| |||||||||||||    
T  28221380 gtaatacccacaaatttaaatgggtatgggcacgagtaagggtactatactgcccagccccgcaaccccgc 28221310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 13 - 181
Target Start/End: Original strand, 32835106 - 32835276
Alignment:
Q  13 tagggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgg 111  Q
    ||||||||||||||| ||  |||| |||||||||    ||||||||| ||| ||||||||||||||||  |||||||||||| |||| | |||||||| |    
T  32835106 tagggatgacaattgaacctaggcccaatgaatacctgcataaaatacccacaatgggtagggtaaaactccgctatcatgggtctggggacgggtccag 32835205  T
Q  112 gtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgcccag-cccgcaaccccgc 181  Q
    |||||| |||||||||||| |||| || || || ||||||||||||||||||||||| |||||||||||||    
T  32835206 gtaatacccacgaatttaaatggatataggcacgggtaagggtactatactgcccagccccgcaaccccgc 32835276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 25059614 - 25059458
Alignment:
Q  13 tagggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcat-ggatctgagacgggtccgg 111  Q
    |||||||| |||||| || ||||||||||| ||| |||||||||||| | | |||||||||||||||| ||||||||||| || || | || |||||| |    
T  25059614 tagggatggcaattggacccaggctcaatggatactcacataaaatacctacaatgggtagggtaaaaccccgctatcatgggttcggggatgggtccag 25059515  T
Q  112 gtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgcccag 168  Q
    |||||| |||||||||| | |||| ||||| || |||||||||||||||||||||||    
T  25059514 gtaatacccacgaattttaatggatatgggcacgggtaagggtactatactgcccag 25059458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 12 - 181
Target Start/End: Complemental strand, 945994 - 945823
Alignment:
Q  12 atagggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggatct-gagacgggtccg 110  Q
    |||||||||||||||| || ||||| ||||| |||  ||||||||||||||| ||||||||| |||||| ||||||||||||| ||| | ||||||||||    
T  945994 atagggatgacaattgaacccaggcccaatggatacccacataaaatatccacaatgggtagagtaaaaccccgctatcatgggtctggggacgggtccg 945895  T
Q  111 ggtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgcccag-cccgcaaccccgc 181  Q
    ||||||| |||||||||| | |||  ||||| || |||||||||  ||||||||| || |||||||| ||||    
T  945894 ggtaatacccacgaattttaatgggtatgggcacgggtaagggtcttatactgcctagacccgcaactccgc 945823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 181
Target Start/End: Complemental strand, 2978930 - 2978760
Alignment:
Q  13 tagggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgg 111  Q
    |||||||| |||||| || ||||  ||||| |||  | ||||||||| ||||||||| |||||||||| ||||||||||||| |||| | ||||||||||    
T  2978930 tagggatggcaattggacccaggtccaatggataaccgcataaaatacccataatggatagggtaaaaccccgctatcatgggtctggggacgggtccgg 2978831  T
Q  112 gtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgcccag-cccgcaaccccgc 181  Q
     ||||| |||||||||| | |||  ||||| || ||||| ||||||||||||||||| |||||||||||||    
T  2978830 ataatacccacgaattttaatgggtatgggcacgggtaaaggtactatactgcccagccccgcaaccccgc 2978760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 259 - 349
Target Start/End: Original strand, 19996518 - 19996608
Alignment:
Q  259 gcctaaactagaacctaaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||||  ||| |||||||| | ||||||||||||||||||||||    
T  19996518 gcctaaactaaaacctaaaccaaaaaactgcttaatacaataacaacttcatcctgctggtgtacaattttttagagatattttggatgtt 19996608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 13 - 171
Target Start/End: Complemental strand, 19506896 - 19506737
Alignment:
Q  13 tagggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgg 111  Q
    |||||||| |||||| || ||||| ||||| |||  | ||||||||| ||| ||||| |||||||||| ||||||||||||| |||| | ||||||||||    
T  19506896 tagggatggcaattggacccaggcccaatggatacccgcataaaatacccacaatggatagggtaaaaccccgctatcatgggtctggggacgggtccgg 19506797  T
Q  112 gtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgcccagccc 171  Q
    |||||| |||||||||| | |||  ||||| || | ||||| ||||||||||||||||||    
T  19506796 gtaatacccacgaattttaatgggtatgggcacggataaggatactatactgcccagccc 19506737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 16 - 181
Target Start/End: Original strand, 19996278 - 19996444
Alignment:
Q  16 ggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggatct-gagacgggtccgggta 114  Q
    ||||| |||||| || || ||||||||||||  |  ||||||||| |||||||||||||||||||  |||||||||||| ||| | ||||||| ||||||    
T  19996278 ggatggcaattggacccatgctcaatgaatacccgtataaaatattcataatgggtagggtaaaactccgctatcatgggtctggggacgggttcgggta 19996377  T
Q  115 atatccacgaatttaattggagatgggtacaggtaagggtactatactgcccagcccgcaaccccgc 181  Q
     || |||| ||||||| |||  ||||  || |||||| |||||||||||| ||||||||||||||||    
T  19996378 ttacccacaaatttaaatgggtatggacacgggtaagagtactatactgctcagcccgcaaccccgc 19996444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 51 - 170
Target Start/End: Complemental strand, 38491896 - 38491776
Alignment:
Q  51 cataaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgggtaatatccacgaatttaattggagatgggtacaggta 149  Q
    ||||||||| ||| |||||||||||||||| ||  ||||||||| | || | | |||||||||||||| |||||||||||| |||| ||||| || ||||    
T  38491896 cataaaatacccacaatgggtagggtaaaaccctactatcatgggtatggggaagggtccgggtaatacccacgaatttaaatggatatgggcacgggta 38491797  T
Q  150 agggtactatactgcccagcc 170  Q
    |||||||||||||||||||||    
T  38491796 agggtactatactgcccagcc 38491776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 54 - 168
Target Start/End: Complemental strand, 425040 - 424925
Alignment:
Q  54 aaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgggtaatatccacgaatttaattggagatgggtacaggtaagg 152  Q
    |||||||||| |||| ||||||||||||||| || | |||| |||| | |||||||||||||||| |||| || |||| |||| ||||| || |||||||    
T  425040 aaaatatccacaatgagtagggtaaaatcccacttttatgggtctgggtacgggtccgggtaatacccacaaaattaaatggatatgggcacgggtaagg 424941  T
Q  153 gtactatactgcccag 168  Q
    ||||||||||||||||    
T  424940 gtactatactgcccag 424925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 259 - 349
Target Start/End: Complemental strand, 28221232 - 28221142
Alignment:
Q  259 gcctaaactagaacctaaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    |||||||||| |||||||||||| ||||| ||||||||| |||||||| |||| ||||  |||||| | ||||||||||||||||||||||    
T  28221232 gcctaaactaaaacctaaaccaataaactgcttaatacagtaacaactccattctgccaatgtacaattttttagagatattttggatgtt 28221142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 259 - 349
Target Start/End: Original strand, 42068968 - 42069058
Alignment:
Q  259 gcctaaactagaacctaaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    |||||||||  ||| ||||||||| |||| |||||||||||||||||||||| ||||||||||| | | |||||| |||||||||||||||    
T  42068968 gcctaaacttaaacttaaaccaaacaactgcttaatacaataacaacttcatcatgccggtgtataattttttagggatattttggatgtt 42069058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 162
Target Start/End: Original strand, 21260345 - 21260494
Alignment:
Q  14 agggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggatct-gagacgggtccggg 112  Q
    |||||||  ||||| || ||||| |||||||||  | ||||||||| | |  ||||||||||||||| |||| |||||||||||| | |||||||||||     
T  21260345 agggatgggaattggacccaggcccaatgaatacccgcataaaatacctacgatgggtagggtaaaaccccgttatcatggatctggggacgggtccgga 21260444  T
Q  113 taatatccacgaatttaattggagatgggtacaggtaagggtactatact 162  Q
    ||||| |||||||||||| |||  ||||| || ||||| |||||||||||    
T  21260445 taatacccacgaatttaaatgggtatgggcacgggtaaaggtactatact 21260494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 54 - 181
Target Start/End: Original strand, 35978144 - 35978273
Alignment:
Q  54 aaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgggtaatatccacgaatttaattggagatgggtacaggtaagg 152  Q
    ||||||| || ||||||||||||||||||||||| | |||| |||| | |||||| ||||||||| |||| || |||| |||  ||||| || ||||| |    
T  35978144 aaaatattcacaatgggtagggtaaaatcccgcttttatgggtctgggcacgggtacgggtaatacccacaaaattaaatgggtatgggcacgggtaatg 35978243  T
Q  153 gtactatactgcccag-cccgcaaccccgc 181  Q
    |||||||||||||||| |||||||||||||    
T  35978244 gtactatactgcccagacccgcaaccccgc 35978273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 261 - 349
Target Start/End: Complemental strand, 2978680 - 2978592
Alignment:
Q  261 ctaaactagaacctaaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    |||||||| ||||||||| |||||||| |||||||||||||||||| ||| |||  |||||||| | |||||||||||||||| |||||    
T  2978680 ctaaactaaaacctaaacaaaaaaactgcttaatacaataacaactccatcatgttggtgtacaatattttagagatattttgtatgtt 2978592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 9222756 - 9222600
Alignment:
Q  13 tagggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgg 111  Q
    |||||||| |||||| || ||| | ||||| |||  | || |||||| ||| |||||||||||||||| |||||| | ||||||||| | |||||| |||    
T  9222756 tagggatggcaattggacccagacccaatggatacccgcaaaaaatacccacaatgggtagggtaaaaccccgcttttatggatctgggcacgggtacgg 9222657  T
Q  112 gtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgcccag 168  Q
    |||||| |||| || |||| |||  ||||| || |||||||||||||||||||||||    
T  9222656 gtaatacccacaaaattaaatgggtatgggcacgggtaagggtactatactgcccag 9222600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 171
Target Start/End: Original strand, 2974841 - 2975000
Alignment:
Q  13 tagggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcat-ggatctgagacgggtccgg 111  Q
    |||||||| |||||| |||||||  ||||| |||  | |||||||||| |||||||||||| ||||||||||| |||||| || |  | |||||||||||    
T  2974841 tagggatggcaattggactcaggtccaatggatacccgcataaaatattcataatgggtagcgtaaaatcccgttatcataggtttggggacgggtccgg 2974940  T
Q  112 gtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgcccagccc 171  Q
    ||||||  ||||||||| | |||  ||||| || |||||  ||||||||||| |||||||    
T  2974941 gtaatacacacgaattttaatgggtatgggcacgggtaaatgtactatactgtccagccc 2975000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 171
Target Start/End: Complemental strand, 7843068 - 7842909
Alignment:
Q  13 tagggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggatctga-gacgggtccgg 111  Q
    |||||||| |||||| ||||| | |||||| |||  | || ||||||  ||||||||||||||||||| | | ||||||||| ||||| ||||||| | |    
T  7843068 tagggatggcaattggactcatgttcaatggatacccgcacaaaatactcataatgggtagggtaaaacctcactatcatgggtctgaggacgggttcag 7842969  T
Q  112 gtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgcccagccc 171  Q
     ||||| |||||||||||| ||||  |||| ||  |||||||||||||||||| ||||||    
T  7842968 ataatacccacgaatttaaatggatttgggcacgagtaagggtactatactgctcagccc 7842909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 259 - 342
Target Start/End: Complemental strand, 19506649 - 19506566
Alignment:
Q  259 gcctaaactagaacctaaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatatttt 342  Q
    |||||||||| || ||||||||||||||| |||||||||||||||||| |||  ||| |||||||| | |||||||||||||||    
T  19506649 gcctaaactaaaatctaaaccaaaaaactgcttaatacaataacaactccatcctgctggtgtacaatattttagagatatttt 19506566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 274 - 349
Target Start/End: Complemental strand, 27783747 - 27783672
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| |||| |||||||||||||||||| ||||||||||||||| | | |||||| |||||||||||||||    
T  27783747 taaaccaaacaactgcttaatacaataacaactccattatgccggtgtataattttttagggatattttggatgtt 27783672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 54 - 171
Target Start/End: Complemental strand, 236987 - 236869
Alignment:
Q  54 aaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgggtaatatccacgaatttaattggagatgggtacaggtaagg 152  Q
    |||||| ||| |||||||||||||||| |||||| |||||| | || | |||||||||||||||| |||| ||||||| |||  ||||| || |||||||    
T  236987 aaaatacccacaatgggtagggtaaaaccccgctttcatgggtttgggcacgggtccgggtaatacccacaaatttaaatgggtatgggcacgggtaagg 236888  T
Q  153 gtactatactgcccagccc 171  Q
     ||||||||| ||||||||    
T  236887 ttactatactacccagccc 236869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 259 - 349
Target Start/End: Original strand, 2975089 - 2975179
Alignment:
Q  259 gcctaaactagaacctaaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    |||||||||| ||||||||  |||||||| |||||||||||||||||| ||| |||  |||||||| | |||||||||||||||| |||||    
T  2975089 gcctaaactaaaacctaaaaaaaaaaactgcttaatacaataacaactccatcatgttggtgtacaatattttagagatattttgtatgtt 2975179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 259 - 349
Target Start/End: Original strand, 32835353 - 32835443
Alignment:
Q  259 gcctaaactagaacctaaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    |||||||||| ||||||||||| |||| | |||||||||||||||||| |||  |||||| ||||| | ||| ||||||||||||||||||    
T  32835353 gcctaaactaaaacctaaaccagaaaattgcttaatacaataacaactccatcttgccggggtacaatttttaagagatattttggatgtt 32835443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 262 - 349
Target Start/End: Complemental strand, 7842825 - 7842741
Alignment:
Q  262 taaactagaacctaaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||| ||||||||||||||||||  |||||||||||||||||||||  |   |||||||| | ||||||||||||||||||||||    
T  7842825 taaactaaaacctaaaccaaaaaactgtttaatacaataacaacttcatctt---ggtgtacaattttttagagatattttggatgtt 7842741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 259 - 346
Target Start/End: Original strand, 21260590 - 21260677
Alignment:
Q  259 gcctaaactagaacctaaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggat 346  Q
    |||||||||| || ||||||||| ||||| ||||||||| ||| |||| |||| ||||| |||||| | |||||||||||||||||||    
T  21260590 gcctaaactaaaatctaaaccaataaactgcttaatacagtaaaaactccattctgccgatgtacaattttttagagatattttggat 21260677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 54 - 168
Target Start/End: Original strand, 25814968 - 25815083
Alignment:
Q  54 aaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgggtaatatccacgaatttaattggagatgggtacaggtaagg 152  Q
    |||||||||| |||||||||||||||| |||||| | |||| |||| | |||||| ||||||||| |||| || |||| |||  ||||  || |||||||    
T  25814968 aaaatatccacaatgggtagggtaaaaccccgcttttatgggtctgggtacgggtacgggtaatacccacaaaattaaatgggtatggacacgggtaagg 25815067  T
Q  153 gtactatactgcccag 168  Q
    ||||||||||||||||    
T  25815068 gtactatactgcccag 25815083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 274 - 349
Target Start/End: Original strand, 29054462 - 29054537
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| |||| |||||||||||||||||| ||| ||||||||||| | | |||||| |||||||||||||||    
T  29054462 taaaccaaacaactgcttaatacaataacaactccatcatgccggtgtataattttttagggatattttggatgtt 29054537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 274 - 349
Target Start/End: Original strand, 48964225 - 48964300
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| |||| |||||||||||||||||| ||| ||||||||||| | | |||||| |||||||||||||||    
T  48964225 taaaccaaacaactgcttaatacaataacaactccatcatgccggtgtataattttttagggatattttggatgtt 48964300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 349
Target Start/End: Complemental strand, 945745 - 945655
Alignment:
Q  259 gcctaaactagaacctaaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||| |||  ||   ||||||| | ||||| |||||||||| |||||    
T  945745 gcctaaactaaaacctaaacaaaaaaactacttaatacaataacaactccatcctgttagtgtacaatattttaaagatattttgaatgtt 945655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 270 - 347
Target Start/End: Complemental strand, 2433466 - 2433389
Alignment:
Q  270 aacctaaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatg 347  Q
    ||||||||  |||||||||||||||||||||||||||||||  ||||| |||||| |  ||||| |||||||||||||    
T  2433466 aacctaaataaaaaaactacttaatacaataacaacttcatcttgccgatgtacaattgtttagggatattttggatg 2433389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 168
Target Start/End: Complemental strand, 13313249 - 13313092
Alignment:
Q  12 atagggatgacaattgcactcaggctcaatgaatattcacataaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccg 110  Q
    ||||||||| |||||| || ||| | ||||| |||  | || |||||| ||| |||||||||||||||| |||||| |  ||| |||| | |||||| ||    
T  13313249 atagggatggcaattggacccagacccaatggatacccgcaaaaaatacccacaatgggtagggtaaaaccccgcttttctgggtctgggcacgggtacg 13313150  T
Q  111 ggtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgcccag 168  Q
    ||||||| |||| || |||| |||  ||||| || |||||||||||||||||||||||    
T  13313149 ggtaatacccacaaaattaaatgggtatgggcacgggtaagggtactatactgcccag 13313092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 54 - 181
Target Start/End: Original strand, 48964009 - 48964132
Alignment:
Q  54 aaaatatccataatgggtagggtaaaatcccgctatcatggatctgagacgggtccgggtaatatccacgaatttaattggagatgggtacaggtaaggg 153  Q
    |||||||||| || ||||||||||||| |||||| | |||| ||||     ||  ||||||||| |||| || |||| |||  ||||| |||||||||||    
T  48964009 aaaatatccacaaagggtagggtaaaaccccgcttttatgggtctg-----ggcacgggtaatacccacaaaattaaatgggtatgggcacaggtaaggg 48964103  T
Q  154 tactatactgcccag-cccgcaaccccgc 181  Q
    ||||||||||||||| |||||||||||||    
T  48964104 tactatactgcccagacccgcaaccccgc 48964132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 349
Target Start/End: Complemental strand, 9222493 - 9222418
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| ||||||||||||||||||||||| ||| ||||||||||| | | ||||||  |||||| |||||||    
T  9222493 taaaccaaacaactacttaatacaataacaactccatcatgccggtgtataattttttaggaatatttcggatgtt 9222418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 13796925 - 13797004
Alignment:
Q  270 aacctaaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||  ||||||||| ||||||||||||||||| |||  |||||| ||||| | |||||| |||||||||||||||    
T  13796925 aacctaaataaaaaaactatttaatacaataacaactccatcttgccggcgtacaattttttagggatattttggatgtt 13797004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 349
Target Start/End: Original strand, 25815182 - 25815257
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| ||||||||||||||||||||||| ||| |||| |||||| | | ||||||| |||||| |||||||    
T  25815182 taaaccaaacaactacttaatacaataacaactccatcatgctggtgtataattttttagaaatatttcggatgtt 25815257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 178
Target Start/End: Complemental strand, 27783977 - 27783846
Alignment:
Q  49 cacataaaatatccataatgggtagggtaaaatcccgctatcatggatct-gagacgggtccgggtaatatccacgaatttaattggagatgggtacagg 147  Q
    |||| |||||||||| |||||||||||||||| |||||| | |||||| | || | |||| ||||||||| |||| || |||| |||  | ||| || ||    
T  27783977 cacaaaaaatatccacaatgggtagggtaaaaccccgcttttatggatttggacatgggtacgggtaatacccacaaaattaaatgggtacgggcacggg 27783878  T
Q  148 taagggtactatactgcccag-cccgcaaccc 178  Q
    ||||||||||||||| ||||| ||||||||||    
T  27783877 taagggtactatactacccagacccgcaaccc 27783846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 349
Target Start/End: Original strand, 35978366 - 35978441
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    |||| |||| |||| |||||||||||||||||| ||| ||||||||||| | | |||||| |||||||||||||||    
T  35978366 taaatcaaacaactgcttaatacaataacaactccatcatgccggtgtataattttttagggatattttggatgtt 35978441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 349
Target Start/End: Original strand, 44327789 - 44327864
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| ||||  ||||||||||||||||| ||| ||||||||||| | | |||||| |||||||||||||||    
T  44327789 taaaccaaacaactgtttaatacaataacaactccatcatgccggtgtataattttttagggatattttggatgtt 44327864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 65 - 181
Target Start/End: Original strand, 29054251 - 29054369
Alignment:
Q  65 aatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgggtaatatccacgaatttaattggagatgggtacaggtaagggtactatactg 163  Q
    |||||||||||||||| |||||| | |||| |||| | |||||| ||| ||||| |||| || |||| |||  ||||| || ||||||||||||||||||    
T  29054251 aatgggtagggtaaaaccccgcttttatgggtctgggtacgggtacggataatacccacaaaattaaatgggcatgggcacgggtaagggtactatactg 29054350  T
Q  164 ccc-agcccgcaaccccgc 181  Q
    ||| | |||||||||||||    
T  29054351 cccaaacccgcaaccccgc 29054369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 181
Target Start/End: Original strand, 44327567 - 44327696
Alignment:
Q  54 aaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgggtaatatccacgaatttaattggagatgggtacaggtaagg 152  Q
    |||||| ||| ||||||||||||||||  ||||| | |||| |||| | |||||| ||||||||| |||| || |||| |||  ||||| || ||||| |    
T  44327567 aaaatacccacaatgggtagggtaaaactccgcttttatgggtctgggcacgggtacgggtaatacccacaaaattaaatgggtatgggcacgggtaatg 44327666  T
Q  153 gtactatactgcccag-cccgcaaccccgc 181  Q
    |||||||| ||||||| |||||||||||||    
T  44327667 gtactatattgcccagacccgcaaccccgc 44327696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 270 - 342
Target Start/End: Complemental strand, 35659804 - 35659732
Alignment:
Q  270 aacctaaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatatttt 342  Q
    ||||||||||||||||||||||||||||||| || || ||| ||| ||||||||| | ||||||  |||||||    
T  35659804 aacctaaaccaaaaaactacttaatacaatatcagctccatcatgtcggtgtacaattttttaggaatatttt 35659732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 102 - 181
Target Start/End: Original strand, 43634221 - 43634301
Alignment:
Q  102 acgggtccgggtaatatccacgaatttaattggagatgggtacaggtaagggtactatactgcccag-cccgcaaccccgc 181  Q
    |||||| ||||||||| |||| || |||| |||| ||||| || |||||||||||||||||||| || |||||||||||||    
T  43634221 acgggtacgggtaatacccacaaaattaaatggatatgggcacgggtaagggtactatactgcctagacccgcaaccccgc 43634301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 306
Target Start/End: Complemental strand, 25059366 - 25059319
Alignment:
Q  259 gcctaaactagaacctaaaccaaaaaactacttaatacaataacaact 306  Q
    |||||||||| ||| |||||||||||| ||||||||||||||||||||    
T  25059366 gcctaaactaaaacataaaccaaaaaattacttaatacaataacaact 25059319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 349
Target Start/End: Original strand, 33794255 - 33794330
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| |||| |||||||||||||||||| ||| ||| |||| || | | |||||| |||||||||||||||    
T  33794255 taaaccaaacaactgcttaatacaataacaactccatcatgtcggtctataattttttagggatattttggatgtt 33794330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 349
Target Start/End: Original strand, 43634363 - 43634438
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| |||| |||||||||||||||||| ||| |||||| |||| | | |||| | |||||||||||||||    
T  43634363 taaaccaaacaactgcttaatacaataacaactccatcatgccgctgtataattttttggggatattttggatgtt 43634438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 178
Target Start/End: Original strand, 42068762 - 42068888
Alignment:
Q  54 aaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgggtaatatccacgaatttaattggagatgggtacaggtaagg 152  Q
    |||||| ||| |||||||||||||||| |||||| | |||||  || | ||| || ||||||||| |||| || |||| |||| |||   || |||||||    
T  42068762 aaaatacccacaatgggtagggtaaaaccccgcttttatggacttgggcacgagtacgggtaatacccacaaaattaaatggatatgtacacgggtaagg 42068861  T
Q  153 gtactatactgcccag-cccgcaaccc 178  Q
    |||||||||||||||| ||||||||||    
T  42068862 gtactatactgcccagacccgcaaccc 42068888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 280 - 349
Target Start/End: Complemental strand, 424815 - 424746
Alignment:
Q  280 aaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    |||||||| |||||||||||||||||| ||| | ||| ||||| | | |||||| |||||||||||||||    
T  424815 aaaaaacttcttaatacaataacaactccatcaggccagtgtataattttttagggatattttggatgtt 424746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 610964 - 610885
Alignment:
Q  270 aacctaaaccaaaaaactacttaatacaataac-aacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| |||||||||||| |||||||||| |||| ||| ||| ||||||||| ||  |||| |||||||||||||||    
T  610964 aacctaaac-aaaaaactactttatacaataacaaactccatcatgtcggtgtacaatcggttagggatattttggatgtt 610885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 349
Target Start/End: Complemental strand, 38491663 - 38491603
Alignment:
Q  289 cttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    |||||||||||||||||| |||  || ||||||| | | ||||||||||||||||||||||    
T  38491663 cttaatacaataacaactccatcctgtcggtgtataattttttagagatattttggatgtt 38491603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 340
Target Start/End: Complemental strand, 236774 - 236707
Alignment:
Q  273 ctaaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatatt 340  Q
    ||||||||||||| ||||||||||||||||| ||||||  || ||||||| | | |||||| ||||||    
T  236774 ctaaaccaaaaaattacttaatacaataacagcttcatcctgtcggtgtataattttttagggatatt 236707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 274 - 349
Target Start/End: Complemental strand, 13312985 - 13312910
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    |||| |||| ||||||||||||||||||||||| ||| |||| |||||| | | ||||||  |||||| |||||||    
T  13312985 taaaacaaacaactacttaatacaataacaactccatcatgctggtgtataattttttaggcatatttcggatgtt 13312910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 96
Target Start/End: Complemental strand, 34321513 - 34321471
Alignment:
Q  54 aaaatatccataatgggtagggtaaaatcccgctatcatggat 96  Q
    |||||||||||||||| ||||||||||||||||| | ||||||    
T  34321513 aaaatatccataatggatagggtaaaatcccgcttttatggat 34321471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 181
Target Start/End: Complemental strand, 611193 - 611064
Alignment:
Q  54 aaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgggtaatatccacgaatttaattggagatgggtacaggtaagg 152  Q
    |||||||| ||||||||||| ||||||  ||||| |||||||| || | ||||||||||||| || ||   ||||||| |||  |||| ||  | |||||    
T  611193 aaaatatctataatgggtagagtaaaactccgctttcatggatatgggcacgggtccgggtagtacccgtaaatttaaatgggtatggatatggataagg 611094  T
Q  153 gtactatactgcccag-cccgcaaccccgc 181  Q
     ||||||||| ||||| |||||||||||||    
T  611093 atactatactacccagtcccgcaaccccgc 611064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 346
Target Start/End: Original strand, 12560473 - 12560545
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggat 346  Q
    ||||||||| |||| |||||||||||||||||| ||| |||  |||||| | | |||||  ||||||||||||    
T  12560473 taaaccaaacaactgcttaatacaataacaactccatcatgttggtgtataattttttaaggatattttggat 12560545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 65 - 116
Target Start/End: Complemental strand, 19494859 - 19494807
Alignment:
Q  65 aatgggtagggtaaaatcccgctatcatggatct-gagacgggtccgggtaat 116  Q
    ||||||||||||||||||||||| |||||| ||| || | |||||||||||||    
T  19494859 aatgggtagggtaaaatcccgctttcatgggtctggacatgggtccgggtaat 19494807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312 (Bit Score: 52; Significance: 9e-21; HSPs: 2)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 54 - 168
Target Start/End: Original strand, 5510 - 5625
Alignment:
Q  54 aaaatatccataatgggtagggtaaaatcccgctatcatggatctgag-acgggtccgggtaatatccacgaatttaattggagatgggtacaggtaagg 152  Q
    |||||||||| |||| ||||||||||||||| || | |||| |||| | |||||||||||||||| |||| || |||| |||| ||||| || |||||||    
T  5510 aaaatatccacaatgagtagggtaaaatcccacttttatgggtctgggtacgggtccgggtaatacccacaaaattaaatggatatgggcacgggtaagg 5609  T
Q  153 gtactatactgcccag 168  Q
    ||||||||||||||||    
T  5610 gtactatactgcccag 5625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 349
Target Start/End: Original strand, 5729 - 5803
Alignment:
Q  275 aaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    |||| |||||||| |||||||||||||||||| ||| | ||| ||||| | | |||||| |||||||||||||||    
T  5729 aaacaaaaaaacttcttaatacaataacaactccatcaggccagtgtataattttttagggatattttggatgtt 5803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0164 (Bit Score: 46; Significance: 3e-17; HSPs: 4)
Name: scaffold0164
Description:

Target: scaffold0164; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 181
Target Start/End: Original strand, 6747 - 6876
Alignment:
Q  54 aaaatatccataatgggtagggtaaaatcccgctatcatggatctg-agacgggtccgggtaatatccacgaatttaattggagatgggtacaggtaagg 152  Q
    |||||||||| ||||||||||||||||  ||| | | |||| |||| | |||||| ||||||||| |||| || |||| |||  ||||| || |||||||    
T  6747 aaaatatccacaatgggtagggtaaaactccgtttttatgggtctggacacgggtacgggtaatacccacaaaattaaatgggtatgggcacgggtaagg 6846  T
Q  153 gtactatactgcccag-cccgcaaccccgc 181  Q
    |||||||||||||||| |||||||||||||    
T  6847 gtactatactgcccagacccgcaaccccgc 6876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0164; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 181
Target Start/End: Original strand, 14628 - 14757
Alignment:
Q  54 aaaatatccataatgggtagggtaaaatcccgctatcatggatctg-agacgggtccgggtaatatccacgaatttaattggagatgggtacaggtaagg 152  Q
    |||||||||| ||||||||||||||||  ||| | | |||| |||| | |||||| ||||||||| |||| || |||| |||  ||||| || |||||||    
T  14628 aaaatatccacaatgggtagggtaaaactccgtttttatgggtctggacacgggtacgggtaatacccacaaaattaaatgggtatgggcacgggtaagg 14727  T
Q  153 gtactatactgcccag-cccgcaaccccgc 181  Q
    |||||||||||||||| |||||||||||||    
T  14728 gtactatactgcccagacccgcaaccccgc 14757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0164; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 349
Target Start/End: Original strand, 6969 - 7044
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| ||||  ||||||||||||||||||||| || |||||||| | | |||||| ||||||||| |||||    
T  6969 taaaccaaacaactgtttaatacaataacaacttcatcattccggtgtataatattttagggatattttgtatgtt 7044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0164; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 349
Target Start/End: Original strand, 14850 - 14925
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| ||||  ||||||||||||||||||||| || |||||||| | | |||||| ||||||||| |||||    
T  14850 taaaccaaacaactgtttaatacaataacaacttcatcattccggtgtataatattttagggatattttgtatgtt 14925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 49 - 178
Target Start/End: Original strand, 240100 - 240231
Alignment:
Q  49 cacataaaatatccataatgggtagggtaaaatcccgctatcatggatct-gagacgggtccgggtaatatccacgaatttaattggagatgggtacagg 147  Q
    |||| |||||||||| ||||| ||||||||||||||||| |  ||||||| || |||||| ||||||||| |||| || |||| |||  | ||| || ||    
T  240100 cacaaaaaatatccacaatggatagggtaaaatcccgcttttgtggatctggacacgggtacgggtaatacccacaaaattaaatgggtacgggcacggg 240199  T
Q  148 taagggtactatactgcccag-cccgcaaccc 178  Q
    ||||||||||||||| ||||| ||||||||||    
T  240200 taagggtactatactacccagacccgcaaccc 240231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 274 - 349
Target Start/End: Original strand, 240328 - 240403
Alignment:
Q  274 taaaccaaaaaactacttaatacaataacaacttcattatgccggtgtacagtcttttagagatattttggatgtt 349  Q
    ||||||||| |||| |||||||||||||||||| ||||||||||||||| | | |||||| ||||||||| |||||    
T  240328 taaaccaaacaactgcttaatacaataacaactccattatgccggtgtataattttttagggatattttgaatgtt 240403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University