View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21006_low_1 (Length: 208)

Name: NF21006_low_1
Description: NF21006
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21006_low_1
NF21006_low_1
[»] chr5 (64 HSPs)
chr5 (1-161)||(7544198-7544358)
chr5 (1-154)||(13634780-13634933)
chr5 (20-161)||(9856942-9857083)
chr5 (7-161)||(26414955-26415109)
chr5 (1-154)||(16938548-16938701)
chr5 (30-161)||(28279527-28279659)
chr5 (1-152)||(36363103-36363254)
chr5 (4-161)||(4373591-4373748)
chr5 (30-161)||(36392201-36392331)
chr5 (8-161)||(8502864-8503017)
chr5 (15-148)||(10072683-10072816)
chr5 (5-161)||(37551470-37551623)
chr5 (5-161)||(37654300-37654453)
chr5 (5-161)||(37606957-37607112)
chr5 (1-95)||(14245110-14245204)
chr5 (5-144)||(37779182-37779321)
chr5 (14-154)||(2550387-2550527)
chr5 (1-150)||(9798634-9798783)
chr5 (7-141)||(20513473-20513611)
chr5 (30-126)||(20146917-20147013)
chr5 (30-148)||(17024275-17024393)
chr5 (1-142)||(10476109-10476250)
chr5 (30-139)||(16501841-16501950)
chr5 (1-67)||(14245202-14245268)
chr5 (14-132)||(29002241-29002359)
chr5 (1-81)||(1657955-1658035)
chr5 (36-160)||(42681516-42681642)
chr5 (76-161)||(11756939-11757024)
chr5 (10-145)||(33744224-33744359)
chr5 (5-146)||(34980887-34981028)
chr5 (80-150)||(14681542-14681612)
chr5 (30-115)||(13839779-13839864)
chr5 (14-107)||(22023483-22023578)
chr5 (2-132)||(43497-43629)
chr5 (97-161)||(22022912-22022976)
chr5 (4-161)||(10650491-10650633)
chr5 (86-153)||(40815367-40815433)
chr5 (1-131)||(12035958-12036087)
chr5 (1-51)||(16938501-16938551)
chr5 (88-150)||(33424911-33424973)
chr5 (36-146)||(21581024-21581134)
chr5 (1-146)||(10204653-10204798)
chr5 (1-67)||(10650449-10650517)
chr5 (5-54)||(11757072-11757121)
chr5 (88-161)||(39966061-39966134)
chr5 (1-44)||(13634733-13634776)
chr5 (85-149)||(14684588-14684654)
chr5 (13-120)||(32727811-32727918)
chr5 (85-154)||(13298335-13298402)
chr5 (1-51)||(26414915-26414965)
chr5 (64-150)||(27110101-27110187)
chr5 (175-208)||(1658008-1658041)
chr5 (1-42)||(2550533-2550574)
chr5 (175-208)||(2550547-2550580)
chr5 (101-146)||(5688490-5688535)
chr5 (85-146)||(10043329-10043390)
chr5 (175-208)||(10476042-10476075)
chr5 (8-89)||(11419221-11419302)
chr5 (175-208)||(13634727-13634760)
chr5 (85-133)||(1977622-1977670)
chr5 (176-208)||(14245242-14245274)
chr5 (98-146)||(15986743-15986791)
chr5 (176-208)||(16938495-16938527)
chr5 (6-50)||(28279650-28279694)
[»] chr4 (69 HSPs)
chr4 (1-153)||(54320504-54320656)
chr4 (5-154)||(31348347-31348496)
chr4 (1-161)||(54935130-54935291)
chr4 (1-161)||(45741952-45742112)
chr4 (1-208)||(27735761-27735967)
chr4 (1-161)||(35248748-35248908)
chr4 (1-150)||(6891433-6891582)
chr4 (1-161)||(41174407-41174567)
chr4 (1-154)||(49735490-49735643)
chr4 (30-153)||(36151646-36151768)
chr4 (1-161)||(5730852-5731012)
chr4 (42-153)||(26167007-26167118)
chr4 (5-161)||(1968377-1968541)
chr4 (36-152)||(16400871-16400987)
chr4 (1-131)||(17938129-17938259)
chr4 (14-153)||(46007734-46007875)
chr4 (21-147)||(47433751-47433876)
chr4 (14-131)||(34110897-34111013)
chr4 (36-133)||(45132559-45132655)
chr4 (30-153)||(29798358-29798478)
chr4 (17-161)||(24565384-24565526)
chr4 (80-161)||(37711205-37711286)
chr4 (8-149)||(44784066-44784206)
chr4 (18-150)||(2247842-2247973)
chr4 (15-146)||(43961487-43961618)
chr4 (77-154)||(2917061-2917138)
chr4 (6-147)||(37761541-37761681)
chr4 (8-152)||(28332875-28333019)
chr4 (1-130)||(21694912-21695040)
chr4 (82-146)||(56135826-56135890)
chr4 (85-144)||(34995130-34995189)
chr4 (92-150)||(54494712-54494769)
chr4 (14-139)||(47846090-47846215)
chr4 (85-146)||(55510247-55510308)
chr4 (30-146)||(22186796-22186912)
chr4 (88-152)||(22921052-22921117)
chr4 (88-152)||(22970682-22970747)
chr4 (1-146)||(29993793-29993938)
chr4 (1-54)||(37711292-37711345)
chr4 (30-118)||(36278356-36278444)
chr4 (85-148)||(18516577-18516640)
chr4 (8-51)||(37711172-37711215)
chr4 (1-68)||(56135771-56135838)
chr4 (88-146)||(17182594-17182652)
chr4 (1-146)||(4437447-4437591)
chr4 (1-46)||(26166959-26167004)
chr4 (58-138)||(14539357-14539437)
chr4 (1-45)||(46007879-46007923)
chr4 (5-76)||(6938394-6938465)
chr4 (1-44)||(31348500-31348543)
chr4 (84-127)||(41227576-41227619)
chr4 (1-51)||(1968531-1968581)
chr4 (1-51)||(6938303-6938353)
chr4 (1-51)||(27735767-27735817)
chr4 (1-131)||(54576349-54576479)
chr4 (98-131)||(23332653-23332686)
chr4 (84-161)||(23813163-23813240)
chr4 (175-208)||(37711318-37711351)
chr4 (175-208)||(46007896-46007929)
chr4 (1-46)||(47433886-47433931)
chr4 (175-208)||(49735687-49735720)
chr4 (82-146)||(54001206-54001271)
chr4 (175-208)||(54935264-54935297)
chr4 (85-146)||(55080656-55080717)
chr4 (98-154)||(5307077-5307132)
chr4 (1-104)||(22659308-22659412)
chr4 (84-132)||(34108331-34108379)
chr4 (85-137)||(47694435-47694487)
chr4 (176-208)||(54320630-54320662)
[»] scaffold0262 (1 HSPs)
scaffold0262 (1-154)||(16318-16471)
[»] chr3 (60 HSPs)
chr3 (1-161)||(41110343-41110503)
chr3 (1-161)||(24560279-24560439)
chr3 (14-161)||(21773844-21773991)
chr3 (1-161)||(25654992-25655154)
chr3 (14-161)||(30200123-30200273)
chr3 (14-161)||(37102184-37102331)
chr3 (13-138)||(9312505-9312630)
chr3 (1-142)||(36568926-36569066)
chr3 (30-161)||(220448-220579)
chr3 (1-161)||(18654622-18654782)
chr3 (1-161)||(52473977-52474137)
chr3 (6-149)||(16275732-16275875)
chr3 (1-161)||(27541953-27542113)
chr3 (1-161)||(41039972-41040132)
chr3 (13-139)||(52185100-52185223)
chr3 (30-127)||(37807176-37807273)
chr3 (36-151)||(2387817-2387932)
chr3 (1-153)||(46556213-46556366)
chr3 (9-153)||(651801-651944)
chr3 (71-153)||(14898046-14898128)
chr3 (15-161)||(55327432-55327578)
chr3 (30-139)||(40463922-40464031)
chr3 (76-161)||(46204948-46205033)
chr3 (34-161)||(10748345-10748479)
chr3 (56-152)||(43005816-43005912)
chr3 (1-146)||(26135874-26136019)
chr3 (1-138)||(34641077-34641212)
chr3 (80-161)||(28582610-28582691)
chr3 (14-146)||(40858642-40858774)
chr3 (82-150)||(51819228-51819296)
chr3 (37-151)||(12790444-12790559)
chr3 (9-84)||(28581216-28581291)
chr3 (82-153)||(54574464-54574535)
chr3 (1-51)||(24560239-24560289)
chr3 (1-138)||(24253807-24253944)
chr3 (5-145)||(10943640-10943780)
chr3 (71-127)||(13082954-13083010)
chr3 (5-139)||(44412445-44412579)
chr3 (85-146)||(16884077-16884138)
chr3 (36-149)||(42699669-42699782)
chr3 (84-148)||(47989070-47989133)
chr3 (84-148)||(47998357-47998420)
chr3 (84-148)||(48007644-48007707)
chr3 (85-160)||(45663250-45663324)
chr3 (85-148)||(54996786-54996848)
chr3 (1-51)||(28582681-28582731)
chr3 (36-146)||(41414155-41414265)
chr3 (14-146)||(48683689-48683823)
chr3 (98-148)||(49815497-49815546)
chr3 (85-146)||(21090177-21090238)
chr3 (110-147)||(31684362-31684399)
chr3 (84-145)||(37237001-37237061)
chr3 (85-146)||(46978504-46978565)
chr3 (85-145)||(8432365-8432425)
chr3 (5-48)||(27542106-27542149)
chr3 (85-132)||(42772123-42772170)
chr3 (88-146)||(17474315-17474373)
chr3 (64-146)||(36727254-36727335)
chr3 (2-51)||(30200263-30200312)
chr3 (110-147)||(31894019-31894056)
[»] chr1 (52 HSPs)
chr1 (1-153)||(40094955-40095108)
chr1 (1-161)||(30010394-30010554)
chr1 (1-161)||(2858954-2859114)
chr1 (1-161)||(12234072-12234232)
chr1 (1-152)||(8529870-8530021)
chr1 (1-154)||(38509916-38510069)
chr1 (1-154)||(51597737-51597890)
chr1 (30-161)||(32951369-32951500)
chr1 (17-161)||(35349502-35349644)
chr1 (1-161)||(41498466-41498627)
chr1 (31-161)||(50744332-50744463)
chr1 (20-153)||(49946629-49946762)
chr1 (33-161)||(45585739-45585867)
chr1 (8-142)||(7444576-7444710)
chr1 (9-139)||(41676363-41676495)
chr1 (22-142)||(36285617-36285737)
chr1 (1-117)||(20576155-20576269)
chr1 (63-161)||(10391934-10392032)
chr1 (30-148)||(26940894-26941012)
chr1 (16-142)||(42230619-42230740)
chr1 (15-151)||(44210943-44211077)
chr1 (5-153)||(6563647-6563794)
chr1 (1-131)||(20607311-20607439)
chr1 (31-146)||(33643345-33643460)
chr1 (85-148)||(42742416-42742478)
chr1 (1-111)||(35512909-35513019)
chr1 (1-146)||(25268341-25268486)
chr1 (79-152)||(2470831-2470908)
chr1 (87-146)||(1085598-1085657)
chr1 (20-96)||(43552037-43552109)
chr1 (1-94)||(28770852-28770943)
chr1 (88-149)||(50079493-50079554)
chr1 (98-149)||(2506613-2506664)
chr1 (85-148)||(27739127-27739189)
chr1 (85-144)||(35927892-35927951)
chr1 (30-104)||(40964717-40964792)
chr1 (85-139)||(51303490-51303544)
chr1 (30-146)||(47071128-47071244)
chr1 (101-149)||(49832621-49832669)
chr1 (1-48)||(41498426-41498473)
chr1 (99-130)||(49065548-49065579)
chr1 (85-132)||(51582072-51582119)
chr1 (1-51)||(2859104-2859154)
chr1 (1-51)||(10391894-10391944)
chr1 (5-51)||(35349634-35349680)
chr1 (1-43)||(38510074-38510116)
chr1 (98-148)||(51303695-51303744)
chr1 (175-208)||(12234205-12234238)
chr1 (175-208)||(20607412-20607445)
chr1 (14-51)||(50744453-50744490)
chr1 (175-207)||(38510089-38510121)
chr1 (98-150)||(43553049-43553101)
[»] chr8 (60 HSPs)
chr8 (5-161)||(31543098-31543254)
chr8 (1-150)||(11575429-11575577)
chr8 (13-161)||(7502988-7503136)
chr8 (5-161)||(16653011-16653167)
chr8 (1-161)||(11785588-11785748)
chr8 (14-161)||(1026884-1027030)
chr8 (14-161)||(9718514-9718661)
chr8 (1-153)||(36308912-36309065)
chr8 (1-151)||(41103526-41103678)
chr8 (9-161)||(1281205-1281357)
chr8 (28-160)||(6315125-6315257)
chr8 (1-153)||(31738493-31738645)
chr8 (30-161)||(7979202-7979333)
chr8 (30-153)||(37923129-37923252)
chr8 (14-161)||(40990216-40990366)
chr8 (1-142)||(30479739-30479880)
chr8 (41-153)||(37032449-37032561)
chr8 (1-154)||(11033486-11033640)
chr8 (31-149)||(28083816-28083934)
chr8 (9-150)||(2248525-2248666)
chr8 (56-161)||(42650410-42650518)
chr8 (24-153)||(30664431-30664560)
chr8 (30-150)||(29358391-29358510)
chr8 (1-153)||(3726885-3727029)
chr8 (6-161)||(12022170-12022325)
chr8 (63-154)||(33922589-33922680)
chr8 (30-142)||(4247569-4247680)
chr8 (1-149)||(16024227-16024375)
chr8 (1-106)||(34634260-34634365)
chr8 (1-132)||(43732778-43732909)
chr8 (57-124)||(29691000-29691067)
chr8 (75-153)||(13405046-13405124)
chr8 (85-148)||(27487065-27487128)
chr8 (1-147)||(30365206-30365352)
chr8 (1-161)||(10028172-10028345)
chr8 (56-139)||(35694832-35694915)
chr8 (1-139)||(6453268-6453406)
chr8 (1-51)||(31543244-31543294)
chr8 (30-131)||(24243100-24243199)
chr8 (87-147)||(27483636-27483696)
chr8 (85-133)||(30581916-30581964)
chr8 (101-141)||(34633819-34633859)
chr8 (1-68)||(8815296-8815363)
chr8 (85-148)||(38198155-38198217)
chr8 (98-144)||(1227884-1227930)
chr8 (4-50)||(7503127-7503173)
chr8 (1-123)||(34196409-34196529)
chr8 (1-51)||(40990356-40990406)
chr8 (175-208)||(1281159-1281192)
chr8 (1-46)||(11575583-11575628)
chr8 (1-46)||(28083764-28083809)
chr8 (175-208)||(31543267-31543300)
chr8 (175-208)||(36309038-36309071)
chr8 (175-208)||(43732882-43732915)
chr8 (85-146)||(43826409-43826470)
chr8 (98-146)||(8671913-8671961)
chr8 (85-133)||(26167846-26167894)
chr8 (3-51)||(30581985-30582033)
chr8 (88-148)||(34552637-34552696)
chr8 (88-148)||(42919838-42919897)
[»] chr7 (60 HSPs)
chr7 (19-161)||(33655148-33655290)
chr7 (4-161)||(40196557-40196714)
chr7 (1-161)||(24970188-24970347)
chr7 (1-161)||(41496979-41497139)
chr7 (1-151)||(4833553-4833703)
chr7 (5-161)||(47390917-47391074)
chr7 (30-161)||(34235058-34235190)
chr7 (1-161)||(1051522-1051680)
chr7 (36-148)||(22163167-22163278)
chr7 (36-148)||(22221875-22221986)
chr7 (1-154)||(25887261-25887415)
chr7 (1-116)||(18231693-18231808)
chr7 (1-161)||(13770970-13771128)
chr7 (1-153)||(42306404-42306552)
chr7 (16-161)||(43230298-43230442)
chr7 (1-137)||(10315719-10315855)
chr7 (71-152)||(34228410-34228491)
chr7 (45-154)||(37417699-37417808)
chr7 (1-132)||(13425142-13425273)
chr7 (31-161)||(40572287-40572416)
chr7 (8-152)||(26365839-26365983)
chr7 (1-153)||(45940678-45940830)
chr7 (14-161)||(17852933-17853079)
chr7 (71-161)||(41008244-41008333)
chr7 (8-146)||(37620851-37620989)
chr7 (1-149)||(33519122-33519270)
chr7 (89-161)||(39855975-39856047)
chr7 (64-137)||(32872866-32872939)
chr7 (80-161)||(31571569-31571652)
chr7 (85-139)||(18063667-18063721)
chr7 (1-146)||(35422041-35422186)
chr7 (1-146)||(36267575-36267720)
chr7 (29-150)||(42087068-42087189)
chr7 (85-148)||(7791794-7791857)
chr7 (1-131)||(28074125-28074255)
chr7 (1-115)||(30592275-30592389)
chr7 (14-139)||(48093977-48094102)
chr7 (75-148)||(48152055-48152127)
chr7 (48-152)||(38378116-38378215)
chr7 (56-120)||(47229909-47229973)
chr7 (84-127)||(18127347-18127390)
chr7 (84-131)||(20393693-20393740)
chr7 (30-150)||(30891045-30891165)
chr7 (85-139)||(23116366-23116420)
chr7 (1-51)||(39856037-39856087)
chr7 (74-153)||(23029435-23029508)
chr7 (1-45)||(40282219-40282263)
chr7 (85-132)||(19261945-19261992)
chr7 (1-68)||(37925863-37925930)
chr7 (1-48)||(47390877-47390924)
chr7 (1-68)||(48013525-48013591)
chr7 (88-146)||(3143557-3143615)
chr7 (5-51)||(41008208-41008254)
chr7 (1-46)||(1051675-1051720)
chr7 (175-208)||(1051693-1051726)
chr7 (175-208)||(4833547-4833580)
chr7 (100-133)||(33519416-33519449)
chr7 (175-208)||(39856060-39856093)
chr7 (85-149)||(21857421-21857485)
chr7 (1-49)||(33655282-33655330)
[»] chr2 (62 HSPs)
chr2 (1-154)||(23748164-23748317)
chr2 (17-161)||(15224732-15224876)
chr2 (1-161)||(36347563-36347723)
chr2 (14-161)||(39732764-39732910)
chr2 (30-150)||(16565850-16565970)
chr2 (5-161)||(40022432-40022591)
chr2 (1-161)||(2241472-2241640)
chr2 (41-138)||(17379897-17379994)
chr2 (3-150)||(36566874-36567022)
chr2 (1-149)||(8426901-8427041)
chr2 (19-161)||(19566860-19567003)
chr2 (1-161)||(36046226-36046384)
chr2 (14-161)||(39821731-39821878)
chr2 (9-139)||(12751899-12752029)
chr2 (36-153)||(28262500-28262617)
chr2 (30-127)||(34209560-34209657)
chr2 (21-152)||(9427056-9427188)
chr2 (58-161)||(12541827-12541931)
chr2 (5-147)||(31795795-31795937)
chr2 (1-131)||(9631652-9631782)
chr2 (30-124)||(42316815-42316909)
chr2 (62-139)||(37739974-37740051)
chr2 (63-150)||(29525815-29525904)
chr2 (18-150)||(32503232-32503364)
chr2 (84-148)||(18811404-18811467)
chr2 (98-161)||(41778835-41778898)
chr2 (24-108)||(27926668-27926752)
chr2 (85-152)||(3094459-3094526)
chr2 (36-150)||(39354231-39354345)
chr2 (88-149)||(886990-887051)
chr2 (1-146)||(45257384-45257529)
chr2 (14-78)||(1583222-1583286)
chr2 (74-142)||(6721717-6721785)
chr2 (98-154)||(35736244-35736300)
chr2 (93-160)||(7681311-7681378)
chr2 (89-152)||(41841753-41841816)
chr2 (1-54)||(17380010-17380063)
chr2 (84-133)||(20545799-20545848)
chr2 (85-146)||(45098246-45098307)
chr2 (1-129)||(887210-887332)
chr2 (1-52)||(22356175-22356226)
chr2 (1-117)||(35736297-35736409)
chr2 (36-138)||(33265691-33265793)
chr2 (1-111)||(42813732-42813842)
chr2 (101-146)||(2381109-2381154)
chr2 (1-46)||(9427007-9427052)
chr2 (85-146)||(31061436-31061497)
chr2 (98-146)||(21662328-21662375)
chr2 (97-144)||(21745248-21745295)
chr2 (84-131)||(31928149-31928196)
chr2 (84-139)||(35325353-35325408)
chr2 (91-145)||(42537859-42537912)
chr2 (1-46)||(15224871-15224916)
chr2 (101-146)||(17333933-17333978)
chr2 (1-34)||(17379868-17379901)
chr2 (101-146)||(22356042-22356087)
chr2 (5-50)||(39821695-39821740)
chr2 (1-46)||(41841704-41841749)
chr2 (176-204)||(9427005-9427033)
chr2 (117-161)||(9591973-9592017)
chr2 (36-132)||(15085757-15085853)
chr2 (176-208)||(17379862-17379894)
[»] chr6 (45 HSPs)
chr6 (1-154)||(9719053-9719205)
chr6 (1-154)||(9721160-9721312)
chr6 (1-154)||(30487328-30487480)
chr6 (9-161)||(33236013-33236164)
chr6 (14-152)||(21606879-21607017)
chr6 (30-139)||(4097563-4097672)
chr6 (14-153)||(31849180-31849319)
chr6 (1-161)||(5585323-5585484)
chr6 (14-161)||(1300681-1300829)
chr6 (1-124)||(10818315-10818438)
chr6 (30-161)||(34176397-34176528)
chr6 (1-161)||(19278056-19278220)
chr6 (1-161)||(1390381-1390541)
chr6 (1-143)||(14515551-14515693)
chr6 (1-133)||(665862-665995)
chr6 (49-150)||(13583792-13583893)
chr6 (9-150)||(16738026-16738167)
chr6 (30-116)||(2900017-2900103)
chr6 (14-153)||(33041540-33041671)
chr6 (39-154)||(2892664-2892778)
chr6 (83-161)||(12811085-12811162)
chr6 (30-160)||(1395698-1395829)
chr6 (31-161)||(10348850-10348981)
chr6 (64-154)||(25741476-25741566)
chr6 (1-149)||(26318379-26318527)
chr6 (101-153)||(2893700-2893752)
chr6 (1-51)||(14515495-14515545)
chr6 (13-150)||(30849948-30850083)
chr6 (84-152)||(32926716-32926784)
chr6 (36-121)||(2892900-2892985)
chr6 (64-153)||(25747403-25747493)
chr6 (108-153)||(6034201-6034246)
chr6 (84-161)||(14548711-14548788)
chr6 (1-142)||(25468422-25468562)
chr6 (59-132)||(29490475-29490548)
chr6 (8-83)||(9298625-9298701)
chr6 (84-131)||(32922437-32922484)
chr6 (98-148)||(16509356-16509405)
chr6 (103-146)||(382978-383021)
chr6 (85-128)||(3023607-3023650)
chr6 (1-52)||(10818251-10818302)
chr6 (101-139)||(5381305-5381343)
chr6 (1-51)||(19278210-19278259)
chr6 (84-133)||(17155446-17155495)
chr6 (176-208)||(14515489-14515521)
[»] scaffold0067 (1 HSPs)
scaffold0067 (1-161)||(39208-39372)
[»] scaffold0171 (1 HSPs)
scaffold0171 (1-153)||(16020-16172)
[»] scaffold0294 (1 HSPs)
scaffold0294 (30-147)||(15339-15455)
[»] scaffold0096 (2 HSPs)
scaffold0096 (14-153)||(6654-6792)
scaffold0096 (1-46)||(6606-6651)
[»] scaffold0341 (1 HSPs)
scaffold0341 (5-153)||(18840-18987)
[»] scaffold0026 (1 HSPs)
scaffold0026 (14-161)||(1234-1381)
[»] scaffold0198 (1 HSPs)
scaffold0198 (1-67)||(3169-3235)
[»] scaffold0018 (1 HSPs)
scaffold0018 (88-150)||(69316-69378)
[»] scaffold0006 (1 HSPs)
scaffold0006 (84-132)||(81516-81564)
[»] scaffold0007 (1 HSPs)
scaffold0007 (6-69)||(242370-242433)
[»] scaffold0119 (1 HSPs)
scaffold0119 (85-146)||(37460-37521)
[»] scaffold0071 (1 HSPs)
scaffold0071 (30-131)||(52977-53078)
[»] scaffold0783 (1 HSPs)
scaffold0783 (84-132)||(6015-6063)
[»] scaffold0004 (1 HSPs)
scaffold0004 (84-124)||(100653-100693)


Alignment Details
Target: chr5 (Bit Score: 121; Significance: 3e-62; HSPs: 64)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 7544358 - 7544198
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||| ||||||| |||||||||||||| ||||||| ||||||||||| ||||||||||    
T  7544358 ttaggaggggaaggaaggggagggtttggttttcatttttaaattacggacactatgaaatgttttttaaaaagttagcatattaacataataaacaatc 7544259  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||    
T  7544258 atataatacttcaatcacacttgatttattttagaaaaacatgttatatagtccgtaattt 7544198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 13634933 - 13634780
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    |||||||||||||||||||||||| ||  ||||||||||||||||| | ||||| |||||||||||||| |||||||||||||||||||||||||| |||    
T  13634933 ttaggaggggaagggaggggaggggttacttttcatttttaaattacgaacactatgaaatgttttttaaaaagttaacatattaacatgataaacgatc 13634834  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacattttatatagtcc 154  Q
    |||||||| ||||||||||| ||||||||||||||||||||| |||||||||||    
T  13634833 atataataattcaatcacacataatttattttagaaaaacatgttatatagtcc 13634780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 9857083 - 9856942
Alignment:
Q  20 gagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcaca 119  Q
    |||||||||  |||||||||||| ||| ||||||| |||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  9857083 gagggtttggctttcatttttaagttacggacactatgaaatgttttttaaaaagttaacatattaacataataaacgatcatataatacttcaatcaca 9856984  T
Q  120 cttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    ||| ||||||||||||||||||| ||||||||||| ||||||    
T  9856983 cttgatttattttagaaaaacatgttatatagtccttaattt 9856942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 7 - 161
Target Start/End: Complemental strand, 26415109 - 26414955
Alignment:
Q  7 ggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataa 106  Q
    |||||| ||||||||| ||||  ||||||||||||| |||  |||||| ||||||||||| || |||||||||||||||||||||||||| | |||||||    
T  26415109 ggggaaaggaggggagagtttacttttcatttttaagttacagacactatgaaatgttttataaaaagttaacatattaacatgataaacgaccatataa 26415010  T
Q  107 tacttcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    ||||||||||||||||||| |||||||||||||||| | ||||||||| ||||||    
T  26415009 tacttcaatcacacttaatatattttagaaaaacatgtcatatagtccgtaattt 26414955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 16938701 - 16938548
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    ||||||| |||| ||||||||||||||   ||||||||||||||||  |||||| |||||||||||||| | ||||||||| |||||||||||||  |||    
T  16938701 ttaggagaggaatggaggggagggtttagatttcatttttaaattactgacactatgaaatgttttttaaagagttaacatgttaacatgataaatgatc 16938602  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacattttatatagtcc 154  Q
    |||||||| |||||||||||||||||||||||||| |||||| |||||||||||    
T  16938601 atataatatttcaatcacacttaatttattttagagaaacatgttatatagtcc 16938548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 30 - 161
Target Start/End: Original strand, 28279527 - 28279659
Alignment:
Q  30 ttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttat 129  Q
    ||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||    
T  28279527 ttttcatttttaaattatggacattatgaaatgttttttaaaaagttaacatattaacatgataaatgatcatataatacttcaatcacacttagtttat 28279626  T
Q  130 tttag-aaaaacattttatatagtccctaattt 161  Q
    ||||| |||||||| ||||||| ||| ||||||    
T  28279627 tttagaaaaaacatgttatatattccataattt 28279659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 36363254 - 36363103
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    |||||||||||||||||| ||| |||   ||||||||||||||||| ||| ||| | |||||| ||||||||||||||||||||| |||||||||||||     
T  36363254 ttaggaggggaagggaggagagagttcacttttcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatg 36363155  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacattttatatagt 152  Q
    |||||| |||||||| |||||| ||||||||||||||||||| |||||||||    
T  36363154 atataaaacttcaatgacacttgatttattttagaaaaacatgttatatagt 36363103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 4 - 161
Target Start/End: Original strand, 4373591 - 4373748
Alignment:
Q  4 ggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcata 103  Q
    |||||||||| ||| |||| ||||  |||| |||||||||||| |||||||||||||| ||||||  |||||||||||||||||||||||||  ||||||    
T  4373591 ggaggggaagagagtggagagtttacttttaatttttaaattacggacactgtgaaatatttttttaaaagttaacatattaacatgataaatgatcata 4373690  T
Q  104 taatacttcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    ||||| |||||||||||||||||||||||  |||||| | ||||||||||| ||||||    
T  4373691 taatatttcaatcacacttaatttatttttaaaaaacttgttatatagtccgtaattt 4373748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 30 - 161
Target Start/End: Original strand, 36392201 - 36392331
Alignment:
Q  30 ttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttat 129  Q
    |||||||||||||||||  |||||| ||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||    
T  36392201 ttttcatttttaaattacagacactatgaaatgttttataaaaagttaacatattaacatgataaacgatcatataatacttcaatcacacttaatctat 36392300  T
Q  130 tttagaaaaacattttatatagtccctaattt 161  Q
    ||||| |||| || ||||||||||| ||||||    
T  36392301 tttag-aaaatatattatatagtccgtaattt 36392331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 8 - 161
Target Start/End: Original strand, 8502864 - 8503017
Alignment:
Q  8 gggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataat 107  Q
    ||||| ||| |||||||||   ||||||||||||||||| ||||| | |||||| ||||||| |||||||||| ||||| |||||| ||||| | |||||    
T  8502864 gggaatggatgggagggttcacttttcatttttaaattacggacattatgaaatattttttaaaaagttaacaaattaatatgatacacaattacataat 8502963  T
Q  108 acttcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||    
T  8502964 acttcaatcacacttaatttattttagaaaagcatgttatatagtccgtaattt 8503017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 15 - 148
Target Start/End: Original strand, 10072683 - 10072816
Alignment:
Q  15 gaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaa 114  Q
    |||||||||||||  ||||||| |||||||| ||   ||| |||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  10072683 gaggggagggtttacttttcatatttaaattgtgagtactatgaaatattttttaaaaagttaacatattaacatgataaacgatcatataatacttcaa 10072782  T
Q  115 tcacacttaatttattttagaaaaacattttata 148  Q
    ||| |||||||||||||||||||||||| |||||    
T  10072783 tcatacttaatttattttagaaaaacatgttata 10072816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 161
Target Start/End: Complemental strand, 37551623 - 37551470
Alignment:
Q  5 gaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatat 104  Q
    ||||| ||||||| ||| |||||  |||||||||||||| ||  |||||||  ||||||||| || |||||||||||||||||||||||||| |||||||    
T  37551623 gagggaaagggagaggatggtttacttttcatttttaaactacagacactg--aaatgttttataaaaagttaacatattaacatgataaacgatcatat 37551526  T
Q  105 aatacttcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    |||||||||||||||| |||||||||||  |||||| ||||||||||||| ||||||    
T  37551525 aatacttcaatcacacataatttatttttaaaaaac-ttttatatagtccataattt 37551470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 161
Target Start/End: Complemental strand, 37654453 - 37654300
Alignment:
Q  5 gaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatat 104  Q
    ||||| ||||||| ||| |||||  |||||||||||||| ||  |||||||  ||||||||| || |||||||||||||||||||||||||| |||||||    
T  37654453 gagggaaagggagaggatggtttacttttcatttttaaactacagacactg--aaatgttttataaaaagttaacatattaacatgataaacgatcatat 37654356  T
Q  105 aatacttcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    |||||||||||||||| |||||||||||  |||||| ||||||||||||| ||||||    
T  37654355 aatacttcaatcacacataatttatttttaaaaaac-ttttatatagtccataattt 37654300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 5 - 161
Target Start/End: Complemental strand, 37607112 - 37606957
Alignment:
Q  5 gaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatat 104  Q
    ||||| |||||||  || |||||  |||||||||||||| ||  || ||| ||||||||||| || |||||||||||||||||||||||||| |||||||    
T  37607112 gagggaaagggagatgatggtttacttttcatttttaaaatacagatactatgaaatgttttataaaaagttaacatattaacatgataaacgatcatat 37607013  T
Q  105 aatacttcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    |||||||||||||||  |||||||||||| ||||||| |||||||||||| ||||||    
T  37607012 aatacttcaatcacatataatttattttaaaaaaaca-tttatatagtccttaattt 37606957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 14245110 - 14245204
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaa 95  Q
    ||||||||||||||||||||||| |||  ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14245110 ttaggaggggaagggaggggaggatttacttttcttttttaaattacggacactgtgaaatgttttttagaaagttaacatattaacatgataaa 14245204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 5 - 144
Target Start/End: Complemental strand, 37779321 - 37779182
Alignment:
Q  5 gaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatat 104  Q
    ||||| |||||||  || |||||  |||||||||||||| ||  || ||| ||||||||||| || |||||||||||||||||||||||||| |||||||    
T  37779321 gagggaaagggagatgatggtttacttttcatttttaaactacagatactatgaaatgttttataaaaagttaacatattaacatgataaacgatcatat 37779222  T
Q  105 aatacttcaatcacacttaatttattttagaaaaacattt 144  Q
    |||||||||||||||  |||||||||||| ||||||||||    
T  37779221 aatacttcaatcacatataatttattttaaaaaaacattt 37779182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 14 - 154
Target Start/End: Original strand, 2550387 - 2550527
Alignment:
Q  14 ggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaa-agttaacatattaacatgataaacaatcatataatacttc 112  Q
    ||||||||||||||  |||||||||||||||||  |||||| ||| |||||||||  || | |||| ||| || ||||||||||||||||||||||||||    
T  2550387 ggaggggagggtttacttttcatttttaaattacagacactatgatatgtttttttaaacaattaaaataata-catgataaacaatcatataatacttc 2550485  T
Q  113 aatcacacttaatttattttagaaaaacattttatatagtcc 154  Q
    |||||||| ||||||||| ||||||||||| |||||||||||    
T  2550486 aatcacacgtaatttattatagaaaaacatgttatatagtcc 2550527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 9798634 - 9798783
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    ||||||||  |||||| | ||| ||||  ||||||||||||||||| ||| |||  ||||||||||||| ||||| || || ||||||||| |||| |||    
T  9798634 ttaggaggaaaagggatgtgagagtttacttttcatttttaaattacggatactacgaaatgttttttaaaaagtcaatattttaacatgaaaaacgatc 9798733  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacattttatata 150  Q
    ||||||||||||||||||| ||||||||||| |||||||||| |||||||    
T  9798734 atataatacttcaatcacaattaatttatttaagaaaaacatgttatata 9798783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 7 - 141
Target Start/End: Original strand, 20513473 - 20513611
Alignment:
Q  7 ggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc----at 102  Q
    |||||| |||||| ||| |||  |||||||||||||| ||  |||||| |||||||||||||| ||||||||||||||| |||||||||| |||    ||    
T  20513473 ggggaaaggagggaaggatttacttttcatttttaaactacagacactatgaaatgttttttaaaaagttaacatattatcatgataaacgatcatatat 20513572  T
Q  103 ataatacttcaatcacacttaatttattttagaaaaaca 141  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  20513573 ataatacttcaatcacacttaatttattttataaaaaca 20513611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 20146917 - 20147013
Alignment:
Q  30 ttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatt 126  Q
    ||||||||||||||||| || |||| |||||||||||||| |||||||||||||||||||||||| | ||||||||||| |||||||||||||||||    
T  20146917 ttttcatttttaaattacggtcactatgaaatgttttttaaaaagttaacatattaacatgataagcgatcatataatatttcaatcacacttaatt 20147013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 30 - 148
Target Start/End: Original strand, 17024275 - 17024393
Alignment:
Q  30 ttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttat 129  Q
    ||||||||||||||||   |||| | ||||||||| |||| ||||||| ||||||||||||| |||| |||||||||||||||||||  |||||||||||    
T  17024275 ttttcatttttaaattgcagacattatgaaatgttctttaaaaagttatcatattaacatgaaaaacgatcatataatacttcaatcgtacttaatttat 17024374  T
Q  130 tttagaaaaacattttata 148  Q
    ||||||||||||| |||||    
T  17024375 tttagaaaaacatgttata 17024393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 10476250 - 10476109
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    |||||||||||||||||||||| ||||  || | |||||||||||| |  |||| |||||| ||| | | |||   |||||||||| ||||||||| ||     
T  10476250 ttaggaggggaagggaggggagtgtttacttataatttttaaattacgaccactatgaaatatttataaaaaaaaaaacatattaagatgataaacgatt 10476151  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacat 142  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  10476150 atataatacttcaatcacacttaatttattttagaaaaacat 10476109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 16501841 - 16501950
Alignment:
Q  30 ttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttat 129  Q
    ||||||||||||||||| ||||| | |||||||||||||  ||||||||||||||||||| |||||  ||||||||| |||| |||||||||| ||||||    
T  16501841 ttttcatttttaaattacggacattatgaaatgtttttttaaaagttaacatattaacataataaatgatcatataaaactttaatcacacttgatttat 16501940  T
Q  130 tttagaaaaa 139  Q
    ||||||||||    
T  16501941 tttagaaaaa 16501950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 14245268 - 14245202
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttt 67  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  14245268 ttaggaggggaagggaggggagggtttgtttttcatttttaaattacggacactgtgaaatgttttt 14245202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 29002241 - 29002359
Alignment:
Q  14 ggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttca 113  Q
    ||||||||||||||  ||||||||||||||||||| ||||| | |||||||||||  |||   |||||||||||||||||||| ||||||||||||| ||    
T  29002241 ggaggggagggtttacttttcatttttaaattatgaacactataaaatgttttttttaaaaacaacatattaacatgataaacgatcatataatactaca 29002340  T
Q  114 atcacacttaatttatttt 132  Q
    |||| | ||||||||||||    
T  29002341 atcatatttaatttatttt 29002359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 1658035 - 1657955
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacat 81  Q
    |||||||||||||||||||||||||||  ||||||||||||||||| ||||||| | |||||||||||| |||||||||||    
T  1658035 ttaggaggggaagggaggggagggtttacttttcatttttaaattacggacactataaaatgttttttaaaaagttaacat 1657955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 36 - 160
Target Start/End: Complemental strand, 42681642 - 42681516
Alignment:
Q  36 tttttaaattatggacactgtgaaa--tgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttatttta 133  Q
    ||||||||||||| ||||| | |||  | ||||||| ||| |||| ||| ||||||||||||  |||||||||||||| ||||||||| || ||||||||    
T  42681642 tttttaaattatgcacactatcaaaaatattttttaaaaaattaaaataataacatgataaatgatcatataatactttaatcacactaaaattatttta 42681543  T
Q  134 gaaaaacattttatatagtccctaatt 160  Q
    ||||||||| ||||||||||| |||||    
T  42681542 gaaaaacatgttatatagtccgtaatt 42681516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 76 - 161
Target Start/End: Complemental strand, 11757024 - 11756939
Alignment:
Q  76 taacatattaacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    |||||||||||||| |||||  |||||||||||||| ||||||||||||||||||||||| |||||| ||||||||| | ||||||    
T  11757024 taacatattaacatcataaatgatcatataatactttaatcacacttaatttattttagagaaacatgttatatagttcgtaattt 11756939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 10 - 145
Target Start/End: Original strand, 33744224 - 33744359
Alignment:
Q  10 gaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatac 109  Q
    ||||||||||||||||||  ||||| ||||||||||||||||| | | ||||| ||||| |||| || |  ||  |||||||||||  |||||||| | |    
T  33744224 gaagggaggggagggtttacttttcttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgataaatgatcatatatttc 33744323  T
Q  110 ttcaatcacacttaatttattttagaaaaacatttt 145  Q
    |||||  ||||||||||||||||| |||||||||||    
T  33744324 ttcaaaaacacttaatttattttaaaaaaacatttt 33744359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 5 - 146
Target Start/End: Complemental strand, 34981028 - 34980887
Alignment:
Q  5 gaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatat 104  Q
    |||||||||||||||||||  ||  ||||| ||||||||||||||||| | | ||||| ||| |||||| || |  ||  |||||||||||  || ||||    
T  34981028 gaggggaagggaggggaggacttacttttcttttttaaattatggacattataaaatgatttatagaaaattgagttaacaacatgataaatgattatat 34980929  T
Q  105 aatacttcaatcacacttaatttattttagaaaaacatttta 146  Q
    ||||||||||  ||||||||||||||||| ||||| ||||||    
T  34980928 aatacttcaaaaacacttaatttattttaaaaaaatatttta 34980887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 80 - 150
Target Start/End: Complemental strand, 14681612 - 14681542
Alignment:
Q  80 atattaacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacattttatata 150  Q
    |||||||||||||||||| ||||||| | ||||||||||| ||||||||||||| |||||||| |||||||    
T  14681612 atattaacatgataaacagtcatatattccttcaatcacatttaatttattttaaaaaaacatgttatata 14681542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 115
Target Start/End: Original strand, 13839779 - 13839864
Alignment:
Q  30 ttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaat 115  Q
    ||||| ||||||||||||||||||| | |||||| ||||  |||||| | ||| |||||||||| |||||||||||||||||||||    
T  13839779 ttttcttttttaaattatggacactataaaatgtattttgaaaagttgaaataataacatgatagacaatcatataatacttcaat 13839864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 107
Target Start/End: Complemental strand, 22023578 - 22023483
Alignment:
Q  14 ggaggggagggtttgtttttcatttttaaattatggacactg-tgaaatgttttttagaaa-gttaacatattaacatgataaacaatcatataat 107  Q
    ||||||||||||||  ||||||||| ||||||| ||| | |  |||||||||||||| ||| ||||||||||||||||||||||| ||||||||||    
T  22023578 ggaggggagggtttacttttcatttataaattacggatatttatgaaatgttttttaaaaaagttaacatattaacatgataaacgatcatataat 22023483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 132
Target Start/End: Complemental strand, 43629 - 43497
Alignment:
Q  2 taggaggggaagggaggggagggtttgtttttcatttttaaa-ttatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaat- 99  Q
    ||||||||||||  ||| ||| ||||  |||||||||||||| ||| | ||||| |||||| ||||||  ||||||||||||||||||| |||||  ||     
T  43629 taggaggggaagaaaggagagagtttacttttcatttttaaaattacgaacactatgaaatattttttgaaaagttaacatattaacataataaaagata 43530  T
Q  100 catataatacttcaatcacacttaatttatttt 132  Q
    ||| |||||||||| ||| ||||||||| ||||    
T  43529 catgtaatacttcagtcatacttaatttttttt 43497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 161
Target Start/End: Complemental strand, 22022976 - 22022912
Alignment:
Q  97 aatcatataatacttcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    |||| ||||||  |||||||||||||||||||||||||||||| || ||||||||||| ||||||    
T  22022976 aatcctataatctttcaatcacacttaatttattttagaaaaatatgttatatagtccgtaattt 22022912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 4 - 161
Target Start/End: Complemental strand, 10650633 - 10650491
Alignment:
Q  4 ggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcata 103  Q
    ||||||||||||||| ||  ||||  ||||  ||||||||||| ||| ||| ||||||||||| || ||||||||||||||| ||||                 
T  10650633 ggaggggaagggaggagaaagtttactttttgtttttaaattacggatactatgaaatgttttataaaaagttaacatattaccatg------------- 10650547  T
Q  104 taatacttcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
      ||||||||||||||||||||||||||||||||||||||| |||  |||| ||||||    
T  10650546 --atacttcaatcacacttaatttattttagaaaaacatttcatagtgtccgtaattt 10650491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 86 - 153
Target Start/End: Complemental strand, 40815433 - 40815367
Alignment:
Q  86 acatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacattttatatagtc 153  Q
    |||||||||||||| |||||||| |||||||||||||  ||||||||| |||||||| ||||||||||    
T  40815433 acatgataaacaattatataatatttcaatcacactt-ttttattttataaaaacatgttatatagtc 40815367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 12035958 - 12036087
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    ||||||||||||||||| |||||  ||||||||| ||||||||||||| ||| | | ||||  || ||||||| || | ||   |||||||||||  |||    
T  12035958 ttaggaggggaagggagaggaggacttgtttttcttttttaaattatgaacattataaaattattattagaaaattga-attacaacatgataaattatc 12036056  T
Q  101 atataatacttcaatcacacttaatttattt 131  Q
    ||||||||||| ||  |||||||||||||||    
T  12036057 atataatacttaaaaaacacttaatttattt 12036087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 16938501 - 16938551
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggac 51  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||| ||||    
T  16938501 ttaggaggggaagggaggggagggtttgtttttcttttttaagttacggac 16938551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 33424911 - 33424973
Alignment:
Q  88 atgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacattttatata 150  Q
    ||||||||  |||||||||||||| ||||| | ||||||||||||| ||||||||||||||||    
T  33424911 atgataaatgatcatataatactttaatcagatttaatttattttataaaaacattttatata 33424973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 36 - 146
Target Start/End: Complemental strand, 21581134 - 21581024
Alignment:
Q  36 tttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttattttaga 135  Q
    ||||||||||||||||  | ||||||  |||||||||| || |  ||  |||||||||||   |||||| |||||||||  ||||||||||||||||| |    
T  21581134 tttttaaattatggacgttatgaaataatttttagaaaattgaattaacaacatgataaatgttcatatgatacttcaaaaacacttaatttattttaaa 21581035  T
Q  136 aaaacatttta 146  Q
    |||| ||||||    
T  21581034 aaaatatttta 21581024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 10204798 - 10204653
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    |||||||||||||||||||||||  ||  ||||| ||||||| |||  |||| |   ||||| |||||| ||| || |  ||  ||| | |||||  |||    
T  10204798 ttaggaggggaagggaggggaggacttacttttcttttttaatttacagacattaaaaaatgatttttaaaaaattgaattaacaacgtaataaatgatc 10204699  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacatttta 146  Q
    ||||||||||||||  ||||||||||||||||| ||| ||||||||    
T  10204698 atataatacttcaaaaacacttaatttattttaaaaagacatttta 10204653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 10650449 - 10650517
Alignment:
Q  1 ttaggaggggaa--gggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttt 67  Q
    ||||||||||||  ||||||||||| |||  |||| |||||||||||| ||||||| ||||||||||||    
T  10650449 ttaggaggggaaaagggaggggaggatttactttttatttttaaattacggacactatgaaatgttttt 10650517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 11757121 - 11757072
Alignment:
Q  5 gaggggaagggaggggagggtttgtttttcatttttaaattatggacact 54  Q
    |||||||||||||||||||||||   |||||||||||||||| |||||||    
T  11757121 gaggggaagggaggggagggtttagatttcatttttaaattacggacact 11757072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 161
Target Start/End: Original strand, 39966061 - 39966134
Alignment:
Q  88 atgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    |||| |||||||||||||||| |||||||||  ||||||||||| | ||||| || ||||||| ||| ||||||    
T  39966061 atgaaaaacaatcatataataattcaatcacgtttaatttatttaaaaaaaatatgttatataatccgtaattt 39966134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 13634733 - 13634776
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaat 44  Q
    |||||||||||||||||||||||||||  ||||| |||||||||    
T  13634733 ttaggaggggaagggaggggagggtttacttttcttttttaaat 13634776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 85 - 149
Target Start/End: Original strand, 14684588 - 14684654
Alignment:
Q  85 aacatgataaacaatcatataatacttcaatcacacttaatttattt--tagaaaaacattttatat 149  Q
    ||||||||||| ||  |||||||| ||||||||||||||||||||||   | |||||||||||||||    
T  14684588 aacatgataaataagtatataatatttcaatcacacttaatttatttaaaaaaaaaacattttatat 14684654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 32727811 - 32727918
Alignment:
Q  13 gggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttc 112  Q
    |||||||||| ||||   ||| |||||||||||| ||  | | |||||| ||||||| |||   |||||||||||||||||||| ||||| ||||| |||    
T  32727811 gggaggggagagtttacattttatttttaaattacgggtattatgaaatattttttaaaaaacgaacatattaacatgataaacgatcatgtaataattc 32727910  T
Q  113 aatcacac 120  Q
    || |||||    
T  32727911 aaccacac 32727918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 154
Target Start/End: Complemental strand, 13298402 - 13298335
Alignment:
Q  85 aacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacattttatatagtcc 154  Q
    ||||||||||| |||||||  |||||| ||||||||||||||||| ||  |||||| |||||||| ||||    
T  13298402 aacatgataaataatcata--atacttaaatcacacttaatttatattgcaaaaacgttttatattgtcc 13298335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 26414915 - 26414965
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggac 51  Q
    |||||||| ||||||||||||||||||  ||||| ||||||||||| ||||    
T  26414915 ttaggaggagaagggaggggagggtttacttttcgtttttaaattacggac 26414965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 150
Target Start/End: Complemental strand, 27110187 - 27110101
Alignment:
Q  64 tttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacattttatata 150  Q
    |||||| ||| |||| | ||||| || |||||  ||||||||||| || ||||||||||||||||||| | ||| | ||||||||||    
T  27110187 tttttaaaaatttaaaacattaatataataaatgatcatataatattttaatcacacttaatttatttaaaaaatatattttatata 27110101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 175 - 208
Target Start/End: Original strand, 1658008 - 1658041
Alignment:
Q  175 taaaccctctcctcccttcccctcctaaaccctc 208  Q
    ||||||||| ||||||||||||||||||||||||    
T  1658008 taaaccctcccctcccttcccctcctaaaccctc 1658041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 2550574 - 2550533
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaa 42  Q
    |||||||||||||||||||||||||||  ||||| |||||||    
T  2550574 ttaggaggggaagggaggggagggtttacttttcttttttaa 2550533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 175 - 208
Target Start/End: Original strand, 2550547 - 2550580
Alignment:
Q  175 taaaccctctcctcccttcccctcctaaaccctc 208  Q
    ||||||||| ||||||||||||||||||||||||    
T  2550547 taaaccctcccctcccttcccctcctaaaccctc 2550580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 146
Target Start/End: Complemental strand, 5688535 - 5688490
Alignment:
Q  101 atataatacttcaatcacacttaatttattttagaaaaacatttta 146  Q
    ||||||||||||||  ||||||||| ||||||| ||||||||||||    
T  5688535 atataatacttcaaaaacacttaatctattttaaaaaaacatttta 5688490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 85 - 146
Target Start/End: Complemental strand, 10043390 - 10043329
Alignment:
Q  85 aacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacatttta 146  Q
    ||||| ||||| ||||||||||||||||||  ||||||||||| ||||| || || ||||||    
T  10043390 aacattataaataatcatataatacttcaaaaacacttaatttcttttaaaacaatatttta 10043329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 175 - 208
Target Start/End: Complemental strand, 10476075 - 10476042
Alignment:
Q  175 taaaccctctcctcccttcccctcctaaaccctc 208  Q
    ||||||||||| ||||||||||||||||||||||    
T  10476075 taaaccctctcatcccttcccctcctaaaccctc 10476042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 11419221 - 11419302
Alignment:
Q  8 gggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacat 89  Q
    |||||| ||| |||| ||||  |||||||||| |||||| ||||| | | |||||||||| | ||||| |||||||||||||    
T  11419221 gggaagagagaggagagtttacttttcattttcaaattaaggacaatataaaatgtttttaaaaaagtaaacatattaacat 11419302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 175 - 208
Target Start/End: Complemental strand, 13634760 - 13634727
Alignment:
Q  175 taaaccctctcctcccttcccctcctaaaccctc 208  Q
    ||||||||| ||||||||||||||||||||||||    
T  13634760 taaaccctcccctcccttcccctcctaaaccctc 13634727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 133
Target Start/End: Complemental strand, 1977670 - 1977622
Alignment:
Q  85 aacatgataaacaatcatataatacttcaatcacacttaatttatttta 133  Q
    |||||||||||  |||||||||||||||||||| || ||||| ||||||    
T  1977670 aacatgataaaggatcatataatacttcaatcaaacctaattgatttta 1977622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 14245242 - 14245274
Alignment:
Q  176 aaaccctctcctcccttcccctcctaaaccctc 208  Q
    |||||||| ||||||||||||||||||||||||    
T  14245242 aaaccctcccctcccttcccctcctaaaccctc 14245274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 146
Target Start/End: Original strand, 15986743 - 15986791
Alignment:
Q  98 atcatataatacttcaatcacacttaatttattttagaaaaacatttta 146  Q
    |||||||||||||| ||  ||||||||||||||||| ||| ||||||||    
T  15986743 atcatataatactttaaaaacacttaatttattttaaaaagacatttta 15986791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 16938527 - 16938495
Alignment:
Q  176 aaaccctctcctcccttcccctcctaaaccctc 208  Q
    |||||||| ||||||||||||||||||||||||    
T  16938527 aaaccctcccctcccttcccctcctaaaccctc 16938495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 28279694 - 28279650
Alignment:
Q  6 aggggaagggaggggagggtttgtttttcatttttaaattatgga 50  Q
    ||||||||||||| ||||||||  ||||| |||||||||||||||    
T  28279694 aggggaagggaggagagggtttacttttcctttttaaattatgga 28279650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 113; Significance: 2e-57; HSPs: 69)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 54320656 - 54320504
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    |||||||||||||||||||||||||||| |||| |||||||||||| ||||||| ||||| |||||||| ||||||| ||||||||||||||||||||||    
T  54320656 ttaggaggggaagggaggggagggtttgattttaatttttaaattacggacactatgaaacgttttttaaaaagttagcatattaacatgataaacaatc 54320557  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacattttatatagtc 153  Q
    |||||||||| |||||||||||||||||||||||||||||||  |||||||||    
T  54320556 atataatactccaatcacacttaatttattttagaaaaacatgatatatagtc 54320504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 5 - 154
Target Start/End: Original strand, 31348347 - 31348496
Alignment:
Q  5 gaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatat 104  Q
    ||||||||||||||| |||||||  ||||||||||||||||| ||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||    
T  31348347 gaggggaagggagggaagggtttacttttcatttttaaattacggacactatgaaatgttttttaaaaagctaacatattaacatgataaacaatcatat 31348446  T
Q  105 aatacttcaatcacacttaatttattttagaaaaacattttatatagtcc 154  Q
    |||| ||||||||||| ||||||||||||||||||||| |||||||||||    
T  31348447 aataattcaatcacacataatttattttagaaaaacatgttatatagtcc 31348496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 54935291 - 54935130
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||| ||||| ||||||| |||||||| ||||||||| |||    
T  54935291 ttaggaggggaagggaggggagggtttatttttcatttttaaattacggacactatgaaatgtattttaaaaagttatcatattaatatgataaacgatc 54935192  T
Q  101 atat-aatacttcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||    
T  54935191 atataaatacttcaatcacacttaatttattttagaaaaacatgttatatagttcgtaattt 54935130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 45742112 - 45741952
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    ||||| ||| |||||||||||| ||||  ||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||| |||    
T  45742112 ttaggcgggaaagggaggggagagtttacttttcatttttaaattacggacactatgaaatgttttttaaaaagttaacatattaacatgataaacgatc 45742013  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    ||||||||||||||||||| |||||||||||||||||||||  ||||||||||| ||||||    
T  45742012 atataatacttcaatcacatttaatttattttagaaaaacaagttatatagtccgtaattt 45741952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 27735967 - 27735761
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    ||||||||||||||||||  ||||||  |||||||||||||||||| ||||||| | |||||||||||| | ||||| |||||||||||||||||  |||    
T  27735967 ttaggaggggaagggaggatagggttcatttttcatttttaaattacggacactataaaatgttttttaaagagttagcatattaacatgataaatgatc 27735868  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacattttatatagtccctaatttnnnnnnnnnnnnttaaaccctctcctcccttcccctcct 200  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||            |||||||||||| ||||||||||||||    
T  27735867 atataatacttcaatcacacttaatttattttaaaaaaacatgttatatagtccgtaattt-aaaaatgaaaattaaaccctctcttcccttcccctcct 27735769  T
Q  201 aaaccctc 208  Q
    ||||||||    
T  27735768 aaaccctc 27735761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 35248908 - 35248748
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    ||||||| || ||||||||||||||||  |||||| ||||||||||||||||||    ||| ||||||  ||||||||| ||||||||||||||| ||||    
T  35248908 ttaggagaggtagggaggggagggtttacttttcaattttaaattatggacactcaagaatatttttttaaaagttaacgtattaacatgataaataatc 35248809  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  35248808 atataatacttcaatcacacttaatttattttagaaaaacatgttatatagtccgtaattt 35248748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 6891582 - 6891433
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    ||||||||||||| |||||||| ||||| ||||| ||||||||||||||||||| |||| ||||||| | ||| |||| ||| |||||| |||||| |||    
T  6891582 ttaggaggggaagagaggggagagtttgattttcgtttttaaattatggacactatgaattgtttttaaaaaaattaaaataataacattataaacgatc 6891483  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacattttatata 150  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  6891482 atataatacttcaatcacacttaatttattttagaaaaacatgttatata 6891433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 41174567 - 41174407
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    ||||||||||||||||||||| |||||  ||||||||||||| ||| ||||||| ||||||| |||||| ||||||| ||||||||||| |||||  |||    
T  41174567 ttaggaggggaagggaggggatggtttagttttcatttttaatttagggacactatgaaatggtttttaaaaagttagcatattaacataataaatgatc 41174468  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    ||||||||| ||||||||| || |||||||||||||||||||  |||||||||||||||||    
T  41174467 atataatacatcaatcacatttgatttattttagaaaaacatgctatatagtccctaattt 41174407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 49735490 - 49735643
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    ||||||||||||||||||||||||||   ||||||||||||||||| |||||   |||||||| ||||| ||||||||| |||||||||||||||| ||     
T  49735490 ttaggaggggaagggaggggagggttcacttttcatttttaaattacggacaacatgaaatgtcttttaaaaagttaacctattaacatgataaacgata 49735589  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacattttatatagtcc 154  Q
    |||||||| ||| ||||||||| ||||||||||||||||||| |||||||||||    
T  49735590 atataatatttctatcacacttgatttattttagaaaaacatgttatatagtcc 49735643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 30 - 153
Target Start/End: Complemental strand, 36151768 - 36151646
Alignment:
Q  30 ttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttat 129  Q
    ||||||||||||||||||| |||||   ||||| |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  36151768 ttttcatttttaaattatgaacactagaaaatgattttta-aaagttaacatattaacatgataaacgatcatataatacttcaatcacacttaatttat 36151670  T
Q  130 tttagaaaaacattttatatagtc 153  Q
    ||||||||||||| ||||||||||    
T  36151669 tttagaaaaacatgttatatagtc 36151646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 5730852 - 5731012
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    ||||||||| ||| || ||||||||||   |||||||||||||||| |||| || | |||| ||||||  | |||||||||||||||||||||||  |||    
T  5730852 ttaggagggaaagagatgggagggtttagatttcatttttaaattacggaccctataaaatattttttgaagagttaacatattaacatgataaatgatc 5730951  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    ||||||||||||||| ||||||||||||||||||| |||||| ||||||||||| ||||||    
T  5730952 atataatacttcaattacacttaatttattttagagaaacatgttatatagtccgtaattt 5731012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 42 - 153
Target Start/End: Complemental strand, 26167118 - 26167007
Alignment:
Q  42 aattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaaca 141  Q
    ||||| ||||||| |||||||||||||  | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  26167118 aattacggacactttgaaatgtttttttaagagttaacatattaacatgataaacgatcatataatacttcaatcacacttaatttattttagagaaaca 26167019  T
Q  142 ttttatatagtc 153  Q
    | ||||||||||    
T  26167018 tgttatatagtc 26167007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 5 - 161
Target Start/End: Original strand, 1968377 - 1968541
Alignment:
Q  5 gaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgt-tttttag-------aaagttaacatattaacatgataaac 96  Q
    ||||| |||||||||||||||||  |||||| | |||||||||||||||| |||||| | ||||||        ||||||||||||||||||||||||||    
T  1968377 gagggaaagggaggggagggtttacttttcaatattaaattatggacactatgaaatatctttttaactttttaaaagttaacatattaacatgataaac 1968476  T
Q  97 aatcatataatacttcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
     ||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||| ||||||    
T  1968477 gatcatataatacttcaatcacacctgatttattttagaaaaacatattatatagtccgtaattt 1968541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 36 - 152
Target Start/End: Complemental strand, 16400987 - 16400871
Alignment:
Q  36 tttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttattttaga 135  Q
    ||||||||||| ||||||| ||||||  |||||| |||||||||||||||||||||||||| |||||||||||||||||||| | |||||||||||||||    
T  16400987 tttttaaattagggacactatgaaatagtttttaaaaagttaacatattaacatgataaacgatcatataatacttcaatcataattaatttattttaga 16400888  T
Q  136 aaaacattttatatagt 152  Q
    ||||||| || ||||||    
T  16400887 aaaacatgttgtatagt 16400871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 17938129 - 17938259
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    |||||||||||| |||||| || ||||  ||||| ||||||||||||||||| | || ||||||||||| ||| |||| ||| ||||||||||||| |||    
T  17938129 ttaggaggggaatggagggaagagtttaattttcgtttttaaattatggacattatggaatgttttttaaaaatttaaaataataacatgataaacgatc 17938228  T
Q  101 atataatacttcaatcacacttaatttattt 131  Q
    |||||||||||||||||||||||||||||||    
T  17938229 atataatacttcaatcacacttaatttattt 17938259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 14 - 153
Target Start/End: Original strand, 46007734 - 46007875
Alignment:
Q  14 ggaggggagggtttgtttttcatttttaaattatggacactgtg-aaatg-ttttttagaaagttaacatattaacatgataaacaatcatataatactt 111  Q
    ||||||||||||||  |||||||||||||||||  ||||   || ||||| ||||||| |||||||||||||||||||||||||  ||||||||||||||    
T  46007734 ggaggggagggtttacttttcatttttaaattaccgacataatgaaaatgtttttttaaaaagttaacatattaacatgataaatgatcatataatactt 46007833  T
Q  112 caatcacacttaatttattttagaaaaacattttatatagtc 153  Q
    ||||| |||||||||||||||| |||||||  ||||||||||    
T  46007834 caatctcacttaatttattttacaaaaacaagttatatagtc 46007875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 21 - 147
Target Start/End: Original strand, 47433751 - 47433876
Alignment:
Q  21 agggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacac 120  Q
    |||||||  ||||| ||||||||||||||||| | || ||||||||||| ||| |||| ||| |||||| |||||| |||||||||||||||||||||||    
T  47433751 agggtttaattttcgtttttaaattatggacattatggaatgttttttaaaaaattaaaataataacat-ataaacgatcatataatacttcaatcacac 47433849  T
Q  121 ttaatttattttagaaaaacattttat 147  Q
    ||||||||||||| |||||||| ||||    
T  47433850 ttaatttattttaaaaaaacatgttat 47433876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 34111013 - 34110897
Alignment:
Q  14 ggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttca 113  Q
    ||||||||||||||  |||| |||||||||||| | | |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| || |    
T  34111013 ggaggggagggtttactttttatttttaaattacg-atactgtgaaatgttttttaaaaagttaacatattaacatgataaacgatcatataatatttta 34110915  T
Q  114 atcacacttaatttattt 131  Q
    | |||||||| |||||||    
T  34110914 agcacacttactttattt 34110897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 36 - 133
Target Start/End: Original strand, 45132559 - 45132655
Alignment:
Q  36 tttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttatttta 133  Q
    ||||||||||||| |||||  ||||||||||| | |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  45132559 tttttaaattatgtacactacgaaatgtttttaa-aaagttaacatattaaaatgataaacgatcatataatacttcaatcacacttaatttatttta 45132655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 30 - 153
Target Start/End: Complemental strand, 29798478 - 29798358
Alignment:
Q  30 ttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatatt-aacatgataaacaatcatataatacttcaatcacacttaattta 128  Q
    ||||||||||||||||| ||||||| |||||||||||||| ||| ||||||| || ||||| |||||| ||||||||||||||||||||||||| |||||    
T  29798478 ttttcatttttaaattacggacactatgaaatgttttttaaaaaattaacatgttaaacataataaacgatcatataatacttcaatcacacttgattta 29798379  T
Q  129 ttttagaaaaacattttatatagtc 153  Q
        |||||||||| ||||||||||    
T  29798378 ----agaaaaacatgttatatagtc 29798358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 17 - 161
Target Start/End: Original strand, 24565384 - 24565526
Alignment:
Q  17 ggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatc 116  Q
    |||||||||||  ||||||||||||||||| ||| | |  |||||| |||||| ||||||||| ||||||| |||||||||| |||||||||||||||||    
T  24565384 ggggagggtttacttttcatttttaaattacggatattacgaaatgctttttaaaaagttaacttattaacgtgataaacaaacatataatacttcaatc 24565483  T
Q  117 acacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    || || |  ||||| ||||||||||| |||||||| || ||||||    
T  24565484 acgctca--ttattatagaaaaacatgttatatagcccgtaattt 24565526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 80 - 161
Target Start/End: Complemental strand, 37711286 - 37711205
Alignment:
Q  80 atattaacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||    
T  37711286 atattaacatgataaatgatcatataatacttcaatcacacttaatttattttagagaaacatgttatatagtccgtaattt 37711205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 8 - 149
Target Start/End: Complemental strand, 44784206 - 44784066
Alignment:
Q  8 gggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataat 107  Q
    |||||||||||| || ||||  ||||| ||||||||||| | |||||  ||||| |||| || || |||||||||||||| | |||||| ||||||||||    
T  44784206 gggaagggagggaagagtttacttttcgtttttaaattacgaacactacgaaatattttcta-aacgttaacatattaaccttataaacgatcatataat 44784108  T
Q  108 acttcaatcacacttaatttattttagaaaaacattttatat 149  Q
    ||||||||||||||||||||| ||||||||||| | ||||||    
T  44784107 acttcaatcacacttaatttactttagaaaaacctgttatat 44784066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 2247842 - 2247973
Alignment:
Q  18 gggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatca 117  Q
    |||||||||  |||||||||||||||||| ||||| | | |||||||| ||| ||  ||||| |||||| |||||||||||| |||||||||||||||||    
T  2247842 gggagggttcatttttcatttttaaattacggacattataaaatgtttattaaaatcttaacttattaatatgataaacaattatataatacttcaatca 2247941  T
Q  118 cacttaatttattttagaaaaacattttatata 150  Q
    ||| | |||| |||||||||||||| |||||||    
T  2247942 cacat-attttttttagaaaaacatgttatata 2247973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 15 - 146
Target Start/End: Complemental strand, 43961618 - 43961487
Alignment:
Q  15 gaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaa 114  Q
    |||||||||| || |||||| ||||||||||||| ||| | | ||||| |||||||||| || |  ||| |||||||||||  |||||||||||||||||    
T  43961618 gaggggagggcttatttttcttttttaaattatgaacattataaaatgatttttagaaaattgaattatcaacatgataaatgatcatataatacttcaa 43961519  T
Q  115 tcacacttaatttattttagaaaaacatttta 146  Q
      ||||||||||||||||| ||||||||||||    
T  43961518 aaacacttaatttattttaaaaaaacatttta 43961487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 77 - 154
Target Start/End: Original strand, 2917061 - 2917138
Alignment:
Q  77 aacatattaacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacattttatatagtcc 154  Q
    |||||||||||||||||||| |||||||||||||||||||||| | |||||||||||||||| ||| |||||||||||    
T  2917061 aacatattaacatgataaacgatcatataatacttcaatcacaataaatttattttagaaaatcatgttatatagtcc 2917138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 6 - 147
Target Start/End: Complemental strand, 37761681 - 37761541
Alignment:
Q  6 aggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatata 105  Q
    ||||||||||||||||||| ||  ||||| ||||||||||||||||| | ||||||| |||||||||| || |  ||  |||||||||||  || |||||    
T  37761681 aggggaagggaggggagggcttccttttcttttttaaattatggacattatgaaatgatttttagaaaattgaattaacaacatgataaatgattatata 37761582  T
Q  106 atacttcaatcacacttaatttattttagaaaaacattttat 147  Q
    | |||||||  |||||||||||||| || ||||| |||||||    
T  37761581 acacttcaaaaacacttaatttattcta-aaaaatattttat 37761541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 152
Target Start/End: Complemental strand, 28333019 - 28332875
Alignment:
Q  8 gggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataat 107  Q
    |||||||||||| || ||||  ||||  |||||||||||   |||||  ||||| |||| || ||  ||| ||||||||| || ||||| ||||||||||    
T  28333019 gggaagggagggaagagtttactttttgtttttaaattaccaacactacgaaatattttctaaaacattagcatattaacctggtaaacgatcatataat 28332920  T
Q  108 acttcaatcacacttaatttattttagaaaaacattttatatagt 152  Q
    |||||||||| |||||||||| ||||||||||| | |||||||||    
T  28332919 acttcaatcatacttaatttactttagaaaaacctgttatatagt 28332875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 21694912 - 21695040
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    |||||||||||||||| ||||||| ||  ||||| ||||||||||| ||||||| | ||||| ||||||  || || | |||  || ||||| ||  |||    
T  21694912 ttaggaggggaagggacgggagggcttacttttcttttttaaattacggacactataaaatggtttttaataaattgaaataacaaaatgat-aatgatc 21695010  T
Q  101 atataatacttcaatcacacttaatttatt 130  Q
    ||||||||||||||||||||||||||||||    
T  21695011 atataatacttcaatcacacttaatttatt 21695040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 82 - 146
Target Start/End: Complemental strand, 56135890 - 56135826
Alignment:
Q  82 attaacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacatttta 146  Q
    ||||||||||||||  |||||||||||||||||  ||||||||||||||||| ||||||||||||    
T  56135890 attaacatgataaatgatcatataatacttcaaaaacacttaatttattttaaaaaaacatttta 56135826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 85 - 144
Target Start/End: Complemental strand, 34995189 - 34995130
Alignment:
Q  85 aacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacattt 144  Q
    ||||||||||| |||| |||||||||||||  ||||||||||||||||||||||||||||    
T  34995189 aacatgataaataatcttataatacttcaaaaacacttaatttattttagaaaaacattt 34995130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 92 - 150
Target Start/End: Complemental strand, 54494769 - 54494712
Alignment:
Q  92 taaacaatcatataatacttcaatcacacttaatttattttagaaaaacattttatata 150  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||    
T  54494769 taaacaatcatataatacttcaatcacacttaacttatttta-aaaaacattttgtata 54494712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 14 - 139
Target Start/End: Original strand, 47846090 - 47846215
Alignment:
Q  14 ggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttca 113  Q
    ||||||||| ||||  ||||| |||||||||| |||||| | | ||||  |||||| ||| || |  ||  ||||||||||| |||||||||||||||||    
T  47846090 ggaggggagagtttacttttcttttttaaattctggacattataaaataatttttacaaaattgaattaagaacatgataaataatcatataatacttca 47846189  T
Q  114 atcacacttaatttattttagaaaaa 139  Q
    |  ||||||||||||||||| |||||    
T  47846190 aaaacacttaatttattttaaaaaaa 47846215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 85 - 146
Target Start/End: Complemental strand, 55510308 - 55510247
Alignment:
Q  85 aacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacatttta 146  Q
    |||||||| ||  |||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  55510308 aacatgatgaatgatcatataatacttcagtcacacttaatttattttaaaaaaacatttta 55510247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 146
Target Start/End: Complemental strand, 22186912 - 22186796
Alignment:
Q  30 ttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttat 129  Q
    ||||| ||||||||||| ||||| | | ||||| |||||||||| || |  ||  |||||||||||  || ||||||||||||||  |||||| ||||||    
T  22186912 ttttcttttttaaattacggacattataaaatgatttttagaaaattgaattaacaacatgataaatgattatataatacttcaaaaacactttatttat 22186813  T
Q  130 tttagaaaaacatttta 146  Q
    |||| ||||||||||||    
T  22186812 tttaaaaaaacatttta 22186796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 152
Target Start/End: Complemental strand, 22921117 - 22921052
Alignment:
Q  88 atgataaacaatcatataatacttcaatcacac-ttaatttattttagaaaaacattttatatagt 152  Q
    ||||||||| ||||||||||||||||||||||| || ||||||| ||||||||||| |||| ||||    
T  22921117 atgataaacgatcatataatacttcaatcacactttgatttattctagaaaaacatgttatgtagt 22921052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 152
Target Start/End: Original strand, 22970682 - 22970747
Alignment:
Q  88 atgataaacaatcatataatacttcaatcacac-ttaatttattttagaaaaacattttatatagt 152  Q
    ||||||||| ||||||||||||||||||||||| || ||||||| ||||||||||| |||| ||||    
T  22970682 atgataaacgatcatataatacttcaatcacactttgatttattctagaaaaacatgttatgtagt 22970747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 29993793 - 29993938
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    ||||||||||||| ||| |||||  | ||||||| ||||||||||| ||||||| | ||||| |||||||||| || |  ||  ||||||||  |  ||     
T  29993793 ttaggaggggaagtgagtggaggactcgtttttcttttttaaattacggacactataaaatgatttttagaaaattgaattaacaacatgattgatgatg 29993892  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacatttta 146  Q
    ||||||||||||||  | ||||||| ||||||| |||||| |||||    
T  29993893 atataatacttcaaaaatacttaatctattttaaaaaaacttttta 29993938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 37711345 - 37711292
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacact 54  Q
    |||||||||||||||||||||||||||   |||||||||||||||| |||||||    
T  37711345 ttaggaggggaagggaggggagggtttagatttcatttttaaattacggacact 37711292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 36278444 - 36278356
Alignment:
Q  30 ttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcac 118  Q
    ||||| |||||||||||  ||||||  ||||| ||||||| ||| ||||| |||||| |||||||| |||| |||| ||||||||||||    
T  36278444 ttttcgtttttaaattacagacactacgaaatattttttataaatttaacgtattaatatgataaataatcttatagtacttcaatcac 36278356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 148
Target Start/End: Original strand, 18516577 - 18516640
Alignment:
Q  85 aacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacattttata 148  Q
    |||||||||||  |||| ||||| |||||||||||||||||| |||||  ||||||||||||||    
T  18516577 aacatgataaatgatcacataatgcttcaatcacacttaattcattttttaaaaacattttata 18516640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 37711172 - 37711215
Alignment:
Q  8 gggaagggaggggagggtttgtttttcatttttaaattatggac 51  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||    
T  37711172 gggaagggaggggagggtttgtttttcttttttaaattacggac 37711215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 56135771 - 56135838
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgtttttt 68  Q
    ||||||||||||||||||||||||||  |||||  ||||||||||| | ||| ||| |||||||||||    
T  56135771 ttaggaggggaagggaggggagggttcatttttattttttaaattacgaacaatgtaaaatgtttttt 56135838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 88 - 146
Target Start/End: Original strand, 17182594 - 17182652
Alignment:
Q  88 atgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacatttta 146  Q
    ||||||||  |||||||||||||||||  ||||||||||||||||| ||||| ||||||    
T  17182594 atgataaatgatcatataatacttcaaaaacacttaatttattttaaaaaaatatttta 17182652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 4437447 - 4437591
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    |||||| || ||||||||||| |  || |||||| ||||||||||||||| | | | ||||| |||||| ||| || |  ||  ||||||||||   |||    
T  4437447 ttaggatggaaagggaggggatgacttatttttcttttttaaattatggatattataaaatgatttttaaaaaattgaattaacaacatgataattgatc 4437546  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacatttta 146  Q
    ||||||||||||||  |||||| |||||||||  ||||||||||||    
T  4437547 atataatacttcaaaaacacttgatttatttt-taaaaacatttta 4437591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 26166959 - 26167004
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaatta 46  Q
    |||||||||||| ||||||||| ||||||||||| |||||||||||    
T  26166959 ttaggaggggaatggaggggagagtttgtttttcttttttaaatta 26167004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 138
Target Start/End: Complemental strand, 14539437 - 14539357
Alignment:
Q  58 aaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaa 138  Q
    |||||||| ||||||| ||||  ||  ||||| |||||  |||||||||||||||||  ||||||||||||||||| ||||    
T  14539437 aaatgtttgttagaaaattaaattaagaacataataaatgatcatataatacttcaaaaacacttaatttattttaaaaaa 14539357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 46007923 - 46007879
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaatt 45  Q
    |||||||||||||||||||||||||||  ||||| ||||||||||    
T  46007923 ttaggaggggaagggaggggagggtttacttttcttttttaaatt 46007879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 6938465 - 6938394
Alignment:
Q  5 gaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagtt 76  Q
    |||||||| |||||||||||||   ||||||||||||||||| ||| | | | |||||||||||| ||||||    
T  6938465 gaggggaatggaggggagggttcacttttcatttttaaattacggatattataaaatgttttttaaaaagtt 6938394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 31348543 - 31348500
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaat 44  Q
    |||||||||||||||||||||||||||  ||||| |||||||||    
T  31348543 ttaggaggggaagggaggggagggtttacttttcttttttaaat 31348500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 84 - 127
Target Start/End: Complemental strand, 41227619 - 41227576
Alignment:
Q  84 taacatgataaacaatcatataatacttcaatcacacttaattt 127  Q
    |||| |||||||  ||||||||||||||||||||||||||||||    
T  41227619 taacgtgataaatgatcatataatacttcaatcacacttaattt 41227576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 1968581 - 1968531
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggac 51  Q
    ||||||||||||||||||| || ||||  ||||||||||||||||| ||||    
T  1968581 ttaggaggggaagggagggaagagtttaattttcatttttaaattacggac 1968531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 6938303 - 6938353
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggac 51  Q
    |||||||||||||||||| |||| ||| |||||| ||||||||||| ||||    
T  6938303 ttaggaggggaagggaggagaggatttatttttcctttttaaattacggac 6938353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 27735767 - 27735817
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggac 51  Q
    |||||||||||||||| | ||||||||  ||||||||||||||||| ||||    
T  27735767 ttaggaggggaagggaagagagggtttaattttcatttttaaattacggac 27735817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 54576349 - 54576479
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    |||| ||||||||||||||||||| ||  ||||| |||||| |||| ||||| | | ||||| ||| |||||| || |  ||  ||| |||||||  ||     
T  54576349 ttagaaggggaagggaggggagggcttacttttcttttttagattacggacattataaaatgatttatagaaaattgaattaacaacgtgataaatgatt 54576448  T
Q  101 atataatacttcaatcacacttaatttattt 131  Q
    ||||||||||||||  ||| |||||||||||    
T  54576449 atataatacttcaaaaacatttaatttattt 54576479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 98 - 131
Target Start/End: Original strand, 23332653 - 23332686
Alignment:
Q  98 atcatataatacttcaatcacacttaatttattt 131  Q
    ||||||||||||||| ||||||||||||||||||    
T  23332653 atcatataatacttctatcacacttaatttattt 23332686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 84 - 161
Target Start/End: Complemental strand, 23813240 - 23813163
Alignment:
Q  84 taacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    ||||| ||||||  |||||||| ||||||||| |||||| ||||| |||  ||||||||||||||  |||| ||||||    
T  23813240 taacacgataaatgatcatatagtacttcaataacactttatttaattttcaaaaacattttatagtgtccgtaattt 23813163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 175 - 208
Target Start/End: Original strand, 37711318 - 37711351
Alignment:
Q  175 taaaccctctcctcccttcccctcctaaaccctc 208  Q
    ||||||||| ||||||||||||||||||||||||    
T  37711318 taaaccctcccctcccttcccctcctaaaccctc 37711351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 175 - 208
Target Start/End: Original strand, 46007896 - 46007929
Alignment:
Q  175 taaaccctctcctcccttcccctcctaaaccctc 208  Q
    ||||||||| ||||||||||||||||||||||||    
T  46007896 taaaccctcccctcccttcccctcctaaaccctc 46007929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 47433931 - 47433886
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaatta 46  Q
    ||||||||||||||||| |||||||||  ||||| |||||||||||    
T  47433931 ttaggaggggaagggagaggagggtttacttttcttttttaaatta 47433886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 175 - 208
Target Start/End: Original strand, 49735687 - 49735720
Alignment:
Q  175 taaaccctctcctcccttcccctcctaaaccctc 208  Q
    ||||||||| ||||||||||||||||||||||||    
T  49735687 taaaccctcccctcccttcccctcctaaaccctc 49735720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 82 - 146
Target Start/End: Original strand, 54001206 - 54001271
Alignment:
Q  82 attaacatgataaacaatcatataatacttcaatcacac-ttaatttattttagaaaaacatttta 146  Q
    ||||||||||||||  |||||||||||||||||  |||| || |||||||||| ||| ||||||||    
T  54001206 attaacatgataaatgatcatataatacttcaaaaacacttttatttattttaaaaagacatttta 54001271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 175 - 208
Target Start/End: Original strand, 54935264 - 54935297
Alignment:
Q  175 taaaccctctcctcccttcccctcctaaaccctc 208  Q
    ||||||||| ||||||||||||||||||||||||    
T  54935264 taaaccctcccctcccttcccctcctaaaccctc 54935297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 85 - 146
Target Start/End: Complemental strand, 55080717 - 55080656
Alignment:
Q  85 aacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacatttta 146  Q
    |||||||||||  |||||| ||||||||||  |||||||| |||||||  ||||||||||||    
T  55080717 aacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacatttta 55080656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 154
Target Start/End: Complemental strand, 5307132 - 5307077
Alignment:
Q  98 atcatataatacttcaatcacacttaatttattttagaaaaacattttatatagtcc 154  Q
    |||||| |||||| ||||||||||| |||||||||  ||||||||||||||| ||||    
T  5307132 atcataaaatactgcaatcacacttgatttatttt-caaaaacattttatatggtcc 5307077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 22659412 - 22659308
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcattttt-aaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaat 99  Q
    ||||||||  |||||||| ||| ||||  ||||||||||| ||||||  |||||  | |||| ||||||  ||| |||| |||||||||| |||||||||    
T  22659412 ttaggaggaaaagggaggagagtgtttacttttcattttttaaattacagacaccataaaatatttttttaaaaattaatatattaacataataaacaat 22659313  T
Q  100 catat 104  Q
    |||||    
T  22659312 catat 22659308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 34108331 - 34108379
Alignment:
Q  84 taacatgataaacaatcatataatacttcaatcacacttaatttatttt 132  Q
    ||||||||||||  ||  |||||||||||||||| ||||||||||||||    
T  34108331 taacatgataaattattgtataatacttcaatcatacttaatttatttt 34108379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 137
Target Start/End: Complemental strand, 47694487 - 47694435
Alignment:
Q  85 aacatgataaacaatcatataatacttcaatcacacttaatttattttagaaa 137  Q
    |||||||||||  ||||||||||||||||| | ||||| ||| ||||||||||    
T  47694487 aacatgataaatgatcatataatacttcaaccgcacttgattgattttagaaa 47694435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 54320630 - 54320662
Alignment:
Q  176 aaaccctctcctcccttcccctcctaaaccctc 208  Q
    |||||||| ||||||||||||||||||||||||    
T  54320630 aaaccctcccctcccttcccctcctaaaccctc 54320662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 110; Significance: 1e-55; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 16318 - 16471
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    ||||||||| || ||||||||||||||  ||||||||||||||||||| ||||| ||||||||||| || || |||||||||||||||||||||||||||    
T  16318 ttaggagggaaaaggaggggagggtttacttttcatttttaaattatgaacactatgaaatgttttataaaacgttaacatattaacatgataaacaatc 16417  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacattttatatagtcc 154  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  16418 atataatacttcaatcacacttaatttattttagacaaacatgttatatagtcc 16471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 109; Significance: 5e-55; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 41110343 - 41110503
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    |||||||||||||||||| || |||||  ||||||||||||||||| ||||||| |||||| |||| || ||||||||||||||||||||||||||||||    
T  41110343 ttaggaggggaagggaggagaaggtttacttttcatttttaaattacggacactatgaaatattttataaaaagttaacatattaacatgataaacaatc 41110442  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    |||||||||||||||||||||||||||||||| ||||||||| |||| |||||| ||||||    
T  41110443 atataatacttcaatcacacttaatttattttcgaaaaacatgttatctagtccgtaattt 41110503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 24560439 - 24560279
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    |||||||||||| ||| ||||| ||||  |||||||||||||||||  |||||| |||||||||||||| |||||||||||||||||||||||||| |||    
T  24560439 ttaggaggggaacggatgggagagtttacttttcatttttaaattaccgacactatgaaatgttttttaaaaagttaacatattaacatgataaacgatc 24560340  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||| ||||||| ||||||    
T  24560339 atataatacttcaatcacatttaatttattttagaaaaacatgttacatagtccgtaattt 24560279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 14 - 161
Target Start/End: Complemental strand, 21773991 - 21773844
Alignment:
Q  14 ggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttca 113  Q
    ||||||||||||||  |||| |||||||||||| | |||||  ||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||    
T  21773991 ggaggggagggtttactttttatttttaaattacgaacactaggaaatgttttttaaaaagttaacatatttacatgataaacaatcatataattcttca 21773892  T
Q  114 atcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  21773891 atcacacttaatttattttagaaaaacatgttatatagtccgtaattt 21773844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 25654992 - 25655154
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    |||||||||||||||||||||||||||  |||||||||||| |||| | |||||  ||||||||||||  | |||||||||||||| ||||||||  |||    
T  25654992 ttaggaggggaagggaggggagggtttacttttcatttttatattacgaacactaagaaatgttttttgaagagttaacatattaatatgataaatgatc 25655091  T
Q  101 --atataatacttcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
      |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  25655092 atatataatacttcaatcacacttaatttattttagaaaaacatgttatatagtccgtaattt 25655154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 14 - 161
Target Start/End: Original strand, 30200123 - 30200273
Alignment:
Q  14 ggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaaca---atcatataatact 110  Q
    ||||||||||||||  ||||||||||||||||| ||||||| |||||||||||||| |||||| |||||||||||| |||||||   |||||||| ||||    
T  30200123 ggaggggagggtttagttttcatttttaaattacggacactatgaaatgttttttaaaaagtttacatattaacataataaacaacgatcatatagtact 30200222  T
Q  111 tcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    | |||||||||| ||||||||||||||||||| ||||||||||| ||||||    
T  30200223 ttaatcacacttgatttattttagaaaaacatgttatatagtccgtaattt 30200273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 14 - 161
Target Start/End: Original strand, 37102184 - 37102331
Alignment:
Q  14 ggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttca 113  Q
    ||||||||||||||  ||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||| || ||| ||||||||||||||||    
T  37102184 ggaggggagggtttagttttcatttttaaattacggacactatgaaatgttttttaaaaagttaacatattaacataat-aacgatcatataatacttca 37102282  T
Q  114 atcacacttaatttattttag-aaaaacattttatatagtccctaattt 161  Q
    | ||||||| ||||||||||| |||||||| ||||||||||| ||||||    
T  37102283 accacacttgatttattttagaaaaaacatgttatatagtccgtaattt 37102331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 13 - 138
Target Start/End: Original strand, 9312505 - 9312630
Alignment:
Q  13 gggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttc 112  Q
    |||| ||||||||||| |||||||||||||||||  |||||| |||||| |||| || ||||||||||||||||||||||||||||||||||||||||      
T  9312505 gggaagggagggtttgattttcatttttaaattacagacactatgaaatattttgtaaaaagttaacatattaacatgataaacaatcatataatactca 9312604  T
Q  113 aatcacacttaatttattttagaaaa 138  Q
    ||||||||||||||||||||||||||    
T  9312605 aatcacacttaatttattttagaaaa 9312630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 36568926 - 36569066
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    ||||||| |||| ||||||||| |||| |||| ||||||||||||  | ||||| |||||||||||| | ||||||||||||||||||||||||||||||    
T  36568926 ttaggagtggaatggaggggagagtttatttt-catttttaaatttcgaacactatgaaatgtttttcaaaaagttaacatattaacatgataaacaatc 36569024  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacat 142  Q
     ||||||| |||||||||||||||||||||||||||||||||    
T  36569025 gtataatagttcaatcacacttaatttattttagaaaaacat 36569066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 30 - 161
Target Start/End: Original strand, 220448 - 220579
Alignment:
Q  30 ttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttat 129  Q
    ||||||||||||||||| ||||| | |||||||||||||| ||||||||||||||||||| |||||||||| ||||| |||||||||| |||| ||||||    
T  220448 ttttcatttttaaattacggacattatgaaatgttttttaaaaagttaacatattaacataataaacaatcttataacacttcaatcatacttgatttat 220547  T
Q  130 tttagaaaaacattttatatagtccctaattt 161  Q
    ||||||||||||| ||| ||||||| ||||||    
T  220548 tttagaaaaacatgttacatagtccgtaattt 220579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 18654622 - 18654782
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    ||||||||| ||| || ||||||||||   |||||||||||||||| |||| || | |||| ||||||  | |||||||||||||||||||||||  |||    
T  18654622 ttaggagggaaagagatgggagggtttagatttcatttttaaattacggaccctataaaatattttttgaagagttaacatattaacatgataaatgatc 18654721  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    ||||||||||||||| ||||||||||||||||||| |||||| ||||||||||| ||||||    
T  18654722 atataatacttcaattacacttaatttattttagagaaacatgttatatagtccgtaattt 18654782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 52474137 - 52473977
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    ||||||||||||||||| |||||||||  |||| |||||||||||| |||  || |||||| |||| || |||||||||||||||| |||||||||| ||    
T  52474137 ttaggaggggaagggagaggagggtttactttttatttttaaattacggatcctatgaaatattttgtaaaaagttaacatattaatatgataaacagtc 52474038  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    |||||||||||||||||||  |||||||||||| || ||||| ||||||| ||| ||||||    
T  52474037 atataatacttcaatcacatgtaatttattttaaaataacatgttatataatccgtaattt 52473977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 6 - 149
Target Start/End: Original strand, 16275732 - 16275875
Alignment:
Q  6 aggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatata 105  Q
    |||| |||||||||||| |||   | ||||||||||||||  ||||| | ||||||||||| || ||||||||| |||||||||||||||||| ||||||    
T  16275732 agggaaagggaggggagagttcactattcatttttaaatttcggacattatgaaatgttttataaaaagttaacttattaacatgataaacaaccatata 16275831  T
Q  106 atacttcaatcacacttaatttattttagaaaaacattttatat 149  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||    
T  16275832 atacttcaatcacacttgatttattttagaaaaacatgttatat 16275875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 27541953 - 27542113
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    |||||||||||||||||| || ||||    ||||||||||||||||  |||||| ||||||  || ||| |||  ||||||||||||||||||||| |||    
T  27541953 ttaggaggggaagggaggagatggttcacatttcatttttaaattagagacactatgaaatacttgttaaaaatctaacatattaacatgataaacgatc 27542052  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    ||||||||||||||||||| ||||||||||||||||||| || ||||||||| | ||||||    
T  27542053 atataatacttcaatcacagttaatttattttagaaaaatatgttatatagttcataattt 27542113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 41039972 - 41040132
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    ||||||||||||| ||| | ||| |||  |||||| ||||||||||  |||||| |||||| |||| || ||||||||||||||||||||||||||||||    
T  41039972 ttaggaggggaagagagcgtaggctttaattttcaattttaaattacagacactatgaaatattttataaaaagttaacatattaacatgataaacaatc 41040071  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    |||||||||||||||||| |||| ||||||||| |||| ||| |||| || ||| ||||||    
T  41040072 atataatacttcaatcacgcttactttattttaaaaaatcatgttatctaatccgtaattt 41040132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 13 - 139
Target Start/End: Complemental strand, 52185223 - 52185100
Alignment:
Q  13 gggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttc 112  Q
    ||||||||||||||| ||||| ||||||||||||||||||||   |||| |||| || ||||||||||||||||||||||||||||||||||||||||||    
T  52185223 gggaggggagggtttattttt-atttttaaattatggacacta--aaatattttataaaaagttaacatattaacatgataaacaatcatataatacttc 52185127  T
Q  113 aatcacacttaatttattttagaaaaa 139  Q
    ||| | | |||||||||||||||||||    
T  52185126 aattatatttaatttattttagaaaaa 52185100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 30 - 127
Target Start/End: Complemental strand, 37807273 - 37807176
Alignment:
Q  30 ttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaattt 127  Q
    ||||| |||||||||| |||||||| |||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  37807273 ttttcgtttttaaattttggacactatgaaatgttttttaaaaagttaatatattaacatgataaacgatcatataatacttcaatcacacttaattt 37807176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 36 - 151
Target Start/End: Original strand, 2387817 - 2387932
Alignment:
Q  36 tttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttattttaga 135  Q
    ||||||||||| ||||||| || |||||||||||  ||||||| ||| ||||||||||||| ||||||||||| || |||||||||||||||||||||||    
T  2387817 tttttaaattacggacactatggaatgttttttaataagttaaaataataacatgataaacgatcatataataatttaatcacacttaatttattttaga 2387916  T
Q  136 aaaacattttatatag 151  Q
    ||||||| ||||||||    
T  2387917 aaaacatgttatatag 2387932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 46556366 - 46556213
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    ||||||| |||| |||||||||| |||  ||||||||||| ||||| ||||||| ||| || ||||||| |||||||| |||||||||||| ||||  ||    
T  46556366 ttaggagaggaatggaggggagg-tttacttttcatttttcaattacggacactatgacatattttttaaaaagttaagatattaacatgacaaacggtc 46556268  T
Q  101 atata--atacttcaatcacacttaatttattttagaaaaacattttatatagtc 153  Q
    |||||  |||||||||||||||| |||||||||| ||||||||| ||||||||||    
T  46556267 atatataatacttcaatcacactcaatttattttggaaaaacatattatatagtc 46556213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 9 - 153
Target Start/End: Complemental strand, 651944 - 651801
Alignment:
Q  9 ggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataata 108  Q
    |||||||||||||||||||  || |  ||||||||||||||| ||| |||||||||||| | ||| |||| ||| |||||||| |||  ||| |||||||    
T  651944 ggaagggaggggagggtttacttattgtttttaaattatggaaactatgaaatgtttttgaaaaa-ttaaaataataacatgacaaaggatcgtataata 651846  T
Q  109 cttcaatcacacttaatttattttagaaaaacattttatatagtc 153  Q
     || |||||||||||||||||||||||||||||| ||||||||||    
T  651845 ttttaatcacacttaatttattttagaaaaacatgttatatagtc 651801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 71 - 153
Target Start/End: Complemental strand, 14898128 - 14898046
Alignment:
Q  71 aaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacattttatatagtc 153  Q
    |||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  14898128 aaagttaatatattaacacgataaacgatcatataatacttcaatcacacttaatttattttagaaaaacatgtcatatagtc 14898046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 15 - 161
Target Start/End: Complemental strand, 55327578 - 55327432
Alignment:
Q  15 gaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaa 114  Q
    |||| ||| ||||| ||||| ||||||||| | ||||| | |||||||||||||| ||||||| | ||||||||| |||||| | |||||||| ||||||    
T  55327578 gaggagagagtttggttttcgtttttaaatcacggacattatgaaatgttttttaaaaagttagcgtattaacataataaacgaacatataatgcttcaa 55327479  T
Q  115 tcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    ||||| || |||||||| |||||| ||| |||| |||||| ||||||    
T  55327478 tcacatttgatttatttaagaaaagcatgttatgtagtccgtaattt 55327432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 40463922 - 40464031
Alignment:
Q  30 ttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttat 129  Q
    ||||||||||||||||| ||||||| | || ||||||||| ||  |||| | | ||||||||||||||||||||||| | ||||||| ||||||||||||    
T  40463922 ttttcatttttaaattacggacactataaattgttttttaaaatattaaaacaataacatgataaacaatcatataaaaattcaatctcacttaatttat 40464021  T
Q  130 tttagaaaaa 139  Q
    ||||||||||    
T  40464022 tttagaaaaa 40464031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 76 - 161
Target Start/End: Complemental strand, 46205033 - 46204948
Alignment:
Q  76 taacatattaacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    ||||||||||| ||| ||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||    
T  46205033 taacatattaatatgttaaatgatcatataatacttcaatcacacttaatttattttagaaaaacatgttatatagttcataattt 46204948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 34 - 161
Target Start/End: Original strand, 10748345 - 10748479
Alignment:
Q  34 catttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaat-------catataatacttcaatcacacttaatt 126  Q
    ||||||||||||| || || | | |||||||||||| |||||||||||||||||||||||||  ||       ||||||||||||  |||||||||||||    
T  10748345 catttttaaattacgggcattataaaatgttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttttatcacacttaatt 10748444  T
Q  127 tattttagaaaaacattttatatagtccctaattt 161  Q
    |||||||||||||||| ||||||| ||| ||||||    
T  10748445 tattttagaaaaacatgttatatactccgtaattt 10748479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 56 - 152
Target Start/End: Original strand, 43005816 - 43005912
Alignment:
Q  56 tgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacattttatatagt 152  Q
    |||||| ||||||| |||||||||||||||| ||||||||  |||||||||||||||||||| | | ||||||||||||||||| || |||||||||    
T  43005816 tgaaatattttttaaaaagttaacatattaatatgataaaatatcatataatacttcaatcaaattaaatttattttagaaaaatatgttatatagt 43005912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 26136019 - 26135874
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    ||||||||||||||||| |||||||||  ||||| ||||||||||| ||||| | | ||||  ||||| |||| || |  ||  || |||||||| |||     
T  26136019 ttaggaggggaagggagtggagggtttacttttcttttttaaattacggacattataaaataattttttgaaaattgaattaacaatatgataaataatt 26135920  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacatttta 146  Q
    ||||||||||||||  ||||||||||||||||  ||||||||||||    
T  26135919 atataatacttcaaaaacacttaatttatttttaaaaaacatttta 26135874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 34641212 - 34641077
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    |||||||||||||||||||||||| ||  ||||| ||||||||||| ||||| | | ||||| |||  ||||| || |  ||  |||||||||||  |||    
T  34641212 ttaggaggggaagggaggggagggcttacttttcttttttaaattacggacattataaaatgattt--agaaaattgaattaacaacatgataaatgatc 34641115  T
Q  101 atataatacttcaatcacacttaatttattttagaaaa 138  Q
    ||||||||||||||  ||||||||||||||||| ||||    
T  34641114 atataatacttcaaaaacacttaatttattttaaaaaa 34641077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 80 - 161
Target Start/End: Original strand, 28582610 - 28582691
Alignment:
Q  80 atattaacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    |||||||||| |||||| || |||||||||||||| ||||||| |||||| |||||||||||| |||||| |||| ||||||    
T  28582610 atattaacataataaacgataatataatacttcaaccacacttgatttatcttagaaaaacatgttatatcgtccgtaattt 28582691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 14 - 146
Target Start/End: Complemental strand, 40858774 - 40858642
Alignment:
Q  14 ggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttca 113  Q
    ||||||||||||||  ||||| ||||||||||| ||||| | | ||||| | ||| |||| || |  ||  |||||||||||  ||||||||||||||||    
T  40858774 ggaggggagggtttagttttcttttttaaattacggacattataaaatgatcttttgaaaattgaattaacaacatgataaatgatcatataatacttca 40858675  T
Q  114 atcacacttaatttattttagaaaaacatttta 146  Q
    |  ||||| ||||||||||| ||||||||||||    
T  40858674 aaaacactaaatttattttaaaaaaacatttta 40858642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 82 - 150
Target Start/End: Original strand, 51819228 - 51819296
Alignment:
Q  82 attaacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacattttatata 150  Q
    ||||||||||||||| ||| |||||||||||||||||||| ||||||||||| ||||| || |||||||    
T  51819228 attaacatgataaacgatcgtataatacttcaatcacactaaatttattttaaaaaaatatattatata 51819296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 37 - 151
Target Start/End: Complemental strand, 12790559 - 12790444
Alignment:
Q  37 ttttaaattatggacactgtgaaatgttttttagaaag-ttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttattttaga 135  Q
    |||||||||||| ||| | |||||| ||||||| |||  |||| ||| ||||||||| ||  |||||||| |||||| || |||||||||||||| ||||    
T  12790559 ttttaaattatgaacattatgaaatattttttaaaaaaattaaaataataacatgatgaaagatcatatattacttcgattacacttaatttattataga 12790460  T
Q  136 aaaacattttatatag 151  Q
    ||||||| ||||||||    
T  12790459 aaaacatgttatatag 12790444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 9 - 84
Target Start/End: Original strand, 28581216 - 28581291
Alignment:
Q  9 ggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatatt 84  Q
    |||||||||||||||||||  |||||||||||||||||  || | |||||||| ||||||| ||||||||||||||    
T  28581216 ggaagggaggggagggtttagttttcatttttaaattacagatattgtgaaatattttttaaaaagttaacatatt 28581291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 82 - 153
Target Start/End: Original strand, 54574464 - 54574535
Alignment:
Q  82 attaacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacattttatatagtc 153  Q
    ||||| |||||||||  | |||||||||||||||||| ||||||||||||||||||||| | ||||||||||    
T  54574464 attaatatgataaacggttatataatacttcaatcacgcttaatttattttagaaaaacgtgttatatagtc 54574535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 24560239 - 24560289
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggac 51  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  24560239 ttaggaggggaagggaggggagggtttgtttttcttttttaaattacggac 24560289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 24253944 - 24253807
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    |||| |||||||||||||| ||| |||  ||||| ||||||||||| ||||| | | |||||  |||||||||||| |  ||  |||||||||||  ||     
T  24253944 ttagaaggggaagggagggaaggatttacttttcttttttaaattacggacattataaaatgagttttagaaagttgaattaacaacatgataaatgatt 24253845  T
Q  101 atataatacttcaatcacacttaatttattttagaaaa 138  Q
    |||||| |||||||  ||||||||||||||||| ||||    
T  24253844 atataacacttcaaaaacacttaatttattttaaaaaa 24253807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 145
Target Start/End: Original strand, 10943640 - 10943780
Alignment:
Q  5 gaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatat 104  Q
    |||||||| ||||| || | |||  ||||| |||||||||||| || | | | ||||| |||||||||| || |  ||  ||||| ||||| ||| ||||    
T  10943640 gaggggaaaggaggagaagatttaattttcttttttaaattatagatattataaaatgatttttagaaaattgaattaacaacataataaataattatat 10943739  T
Q  105 aatacttcaatcacacttaatttattttagaaaaacatttt 145  Q
    ||||||||||  ||||||||||||||||| |||||||||||    
T  10943740 aatacttcaaaaacacttaatttattttaaaaaaacatttt 10943780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 127
Target Start/End: Original strand, 13082954 - 13083010
Alignment:
Q  71 aaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaattt 127  Q
    ||||||||||||||||||| |||||| |||||||||||||||||| |||||| ||||    
T  13082954 aaagttaacatattaacataataaacgatcatataatacttcaattacacttcattt 13083010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 139
Target Start/End: Complemental strand, 44412579 - 44412445
Alignment:
Q  5 gaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatat 104  Q
    |||||||||||||||||||  |   ||||  ||||||||||| | ||| ||| ||||| ||||| |||| || |  ||  |||||||||||  |||||||    
T  44412579 gaggggaagggaggggaggactcacttttattttttaaattacgaacaatgtaaaatgattttttgaaaattgaattaacaacatgataaatcatcatat 44412480  T
Q  105 aatacttcaatcacacttaatttattttagaaaaa 139  Q
    ||||||||||  ||||||||||||||||| |||||    
T  44412479 aatacttcaaaaacacttaatttattttaaaaaaa 44412445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 146
Target Start/End: Original strand, 16884077 - 16884138
Alignment:
Q  85 aacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacatttta 146  Q
    |||||||||||  |||||||||||||||||  ||||||||||||||||| ||| ||||||||    
T  16884077 aacatgataaatgatcatataatacttcaaaaacacttaatttattttaaaaagacatttta 16884138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 149
Target Start/End: Original strand, 42699669 - 42699782
Alignment:
Q  36 tttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttattttaga 135  Q
    ||||||||||||||||| | | ||||   ||||||||| || |  ||| || ||||||||  |||||||||||||||||  ||||||||||||||||  |    
T  42699669 tttttaaattatggacattataaaataaattttagaaaattgaattatcaatatgataaatgatcatataatacttcaaaaacacttaatttatttttta 42699768  T
Q  136 aaaacattttatat 149  Q
    |||| |||||||||    
T  42699769 aaaatattttatat 42699782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 84 - 148
Target Start/End: Original strand, 47989070 - 47989133
Alignment:
Q  84 taacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacattttata 148  Q
    |||||||||||| |||  |||||| ||||||||||| ||||||||||||| ||||||||||||||    
T  47989070 taacatgataaataattttataatgcttcaatcacatttaatttatttta-aaaaacattttata 47989133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 84 - 148
Target Start/End: Original strand, 47998357 - 47998420
Alignment:
Q  84 taacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacattttata 148  Q
    |||||||||||| |||  |||||| ||||||||||| ||||||||||||| ||||||||||||||    
T  47998357 taacatgataaataattttataatgcttcaatcacatttaatttatttta-aaaaacattttata 47998420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 84 - 148
Target Start/End: Original strand, 48007644 - 48007707
Alignment:
Q  84 taacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacattttata 148  Q
    |||||||||||| |||  |||||| ||||||||||| ||||||||||||| ||||||||||||||    
T  48007644 taacatgataaataattttataatgcttcaatcacatttaatttatttta-aaaaacattttata 48007707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 160
Target Start/End: Original strand, 45663250 - 45663324
Alignment:
Q  85 aacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacattttatatagtccctaatt 160  Q
    |||||||||||  ||| ||||||||||||||||||  |||||||||||| ||||| ||||||||| |||| |||||    
T  45663250 aacatgataaatgatcttataatacttcaatcacatataatttatttta-aaaaatattttatattgtccgtaatt 45663324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 148
Target Start/End: Original strand, 54996786 - 54996848
Alignment:
Q  85 aacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacattttata 148  Q
    |||||||||||  ||||||||||||||||||||||||| ||| |||||| | ||||||||||||    
T  54996786 aacatgataaatgatcatataatacttcaatcacacttcattcatttta-ataaacattttata 54996848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 28582731 - 28582681
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggac 51  Q
    |||||||||||||||||||||||||||  ||||| ||||||||||| ||||    
T  28582731 ttaggaggggaagggaggggagggtttacttttcttttttaaattacggac 28582681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 36 - 146
Target Start/End: Complemental strand, 41414265 - 41414155
Alignment:
Q  36 tttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttattttaga 135  Q
    ||||||||| | ||||| | | ||||| |||||||||| || |  ||  |||||||||||  |||||||||||||||||  || ||| |||||||||| |    
T  41414265 tttttaaatcagggacattataaaatgatttttagaaaattgagttaacaacatgataaatgatcatataatacttcaaaaacgcttgatttattttaaa 41414166  T
Q  136 aaaacatttta 146  Q
    |||||||||||    
T  41414165 aaaacatttta 41414155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 14 - 146
Target Start/End: Complemental strand, 48683823 - 48683689
Alignment:
Q  14 ggaggggagggtttgttttt-catttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacat-gataaacaatcatataatactt 111  Q
    |||||||||||||| ||||| | ||||||||||| | ||| | | ||||| ||||||| || || |  ||  ||||| ||||||  ||||||||||| ||    
T  48683823 ggaggggagggtttattttttcttttttaaattacgaacattataaaatgatttttaggaaattgaattaacaacattgataaatgatcatataatattt 48683724  T
Q  112 caatcacacttaatttattttagaaaaacatttta 146  Q
    |||  ||||||||||||||||| ||||||||||||    
T  48683723 caaaaacacttaatttattttaaaaaaacatttta 48683689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 98 - 148
Target Start/End: Complemental strand, 49815546 - 49815497
Alignment:
Q  98 atcatataatacttcaatcacacttaatttattttagaaaaacattttata 148  Q
    ||||||||||||||||||||| |||||||||||||  ||||||||||||||    
T  49815546 atcatataatacttcaatcacgcttaatttatttt-taaaaacattttata 49815497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 146
Target Start/End: Original strand, 21090177 - 21090238
Alignment:
Q  85 aacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacatttta 146  Q
    ||||||||| |  |||||||||||||||||  ||||||||||||||||| ||||| ||||||    
T  21090177 aacatgatatattatcatataatacttcaaaaacacttaatttattttaaaaaaatatttta 21090238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 147
Target Start/End: Complemental strand, 31684399 - 31684362
Alignment:
Q  110 ttcaatcacacttaatttattttagaaaaacattttat 147  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  31684399 ttcaatcacacttaatttattttagaaaaacatgttat 31684362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 145
Target Start/End: Complemental strand, 37237061 - 37237001
Alignment:
Q  84 taacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacatttt 145  Q
    ||||||||||||  ||||| || ||||||||||||||||||||||||||  |||||||||||    
T  37237061 taacatgataaatgatcatttagtacttcaatcacacttaatttatttt-caaaaacatttt 37237001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 146
Target Start/End: Complemental strand, 46978565 - 46978504
Alignment:
Q  85 aacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacatttta 146  Q
    |||||||||||  || ||||||||||||||  ||| ||||||||||||| ||||||||||||    
T  46978565 aacatgataaatgattatataatacttcaaaaacatttaatttattttaaaaaaacatttta 46978504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 145
Target Start/End: Original strand, 8432365 - 8432425
Alignment:
Q  85 aacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacatttt 145  Q
    ||||||||||| |||  |||||||||||||  |||||||||| |||||| |||||||||||    
T  8432365 aacatgataaataattttataatacttcaaaaacacttaattcattttaaaaaaacatttt 8432425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 48
Target Start/End: Complemental strand, 27542149 - 27542106
Alignment:
Q  5 gaggggaagggaggggagggtttgtttttcatttttaaattatg 48  Q
    |||||| ||||||||||| ||||||||||| |||||||||||||    
T  27542149 gaggggcagggaggggagagtttgtttttcttttttaaattatg 27542106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 85 - 132
Target Start/End: Complemental strand, 42772170 - 42772123
Alignment:
Q  85 aacatgataaacaatcatataatacttcaatcacacttaatttatttt 132  Q
    |||||||||||  |||||||||||||||||  ||||||||||||||||    
T  42772170 aacatgataaatgatcatataatacttcaaaaacacttaatttatttt 42772123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 146
Target Start/End: Original strand, 17474315 - 17474373
Alignment:
Q  88 atgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacatttta 146  Q
    |||||||| ||||| ||||||||||||  ||||||||||||||||  ||||| ||||||    
T  17474315 atgataaataatcaaataatacttcaaaaacacttaatttatttttaaaaaatatttta 17474373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 146
Target Start/End: Complemental strand, 36727335 - 36727254
Alignment:
Q  64 tttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacatttta 146  Q
    |||| ||||| ||||| ||  |||||||||||  |||||||||||||||||  |||||| |||||||||| || |||||||||    
T  36727335 ttttaagaaaattaacttaacaacatgataaattatcatataatacttcaaaaacactt-atttattttaaaagaacatttta 36727254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 30200312 - 30200263
Alignment:
Q  2 taggaggggaagggaggggagggtttgtttttcatttttaaattatggac 51  Q
    |||||||||||||||||| |||||||  ||||| ||||||||||| ||||    
T  30200312 taggaggggaagggagggaagggtttacttttcttttttaaattacggac 30200263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 110 - 147
Target Start/End: Original strand, 31894019 - 31894056
Alignment:
Q  110 ttcaatcacacttaatttattttagaaaaacattttat 147  Q
    |||||||||| |||||||||||||||||||||| ||||    
T  31894019 ttcaatcacatttaatttattttagaaaaacatgttat 31894056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 106; Significance: 3e-53; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 40094955 - 40095108
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    |||||||||||||| ||||||||||||  ||||||||||||||||| ||||||| ||||||||||| || |||||||||| ||||||||||||||| |||    
T  40094955 ttaggaggggaaggaaggggagggtttacttttcatttttaaattacggacactatgaaatgttttataaaaagttaacaaattaacatgataaacgatc 40095054  T
Q  101 atataatacttcaatcacacttaatttattttag-aaaaacattttatatagtc 153  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  40095055 atataatacttcaatcacacttaatttattttagaaaaaacatgttatatagtc 40095108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 30010554 - 30010394
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    |||| ||||||||||||||||||||||  |||||||||| |||||| |||||||  ||||||||||||| | ||||||||||||||||| |||||| |||    
T  30010554 ttagaaggggaagggaggggagggtttacttttcattttgaaattacggacactacgaaatgttttttaaatagttaacatattaacattataaacgatc 30010455  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||    
T  30010454 atataatacttcaaccacacttaatttattttagaaaaacatgttatatagtccgtaattt 30010394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 2858954 - 2859114
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    ||||||||| |||||||||||||||||  ||||||||| |||||||  ||| || ||||||||| |||| |||||||||||| | |||| ||||||||||    
T  2858954 ttaggagggaaagggaggggagggtttacttttcatttctaaattacagaccctatgaaatgttatttaaaaagttaacatacttacattataaacaatc 2859053  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||    
T  2859054 atataatacttcaatcacacttaatttatttttgaaaaacatgttatatagtccgtaattt 2859114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 12234232 - 12234072
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    |||||||||||||||||||||||||||  ||||||||||||||||| |||||||  ||||||||||||| ||||||| ||||||||||| ||| |  |||    
T  12234232 ttaggaggggaagggaggggagggtttagttttcatttttaaattacggacactacgaaatgttttttataaagttagcatattaacataatatatgatc 12234133  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    |||| |||| |||||||||||| ||||||||||||||||||| ||||||||||| ||||||    
T  12234132 atattatacatcaatcacacttgatttattttagaaaaacatgttatatagtccgtaattt 12234072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 8530021 - 8529870
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    |||||||||||||||||| ||  ||||  ||||||||||||||||| ||||||| |||||| ||||||| |||||||||||||||||||| ||||| |||    
T  8530021 ttaggaggggaagggaggtgaaagtttacttttcatttttaaattacggacactatgaaatattttttaaaaagttaacatattaacatggtaaacgatc 8529922  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacattttatatagt 152  Q
    ||||||||||||||||||||||||||||||| | |||||||| |||||||||    
T  8529921 atataatacttcaatcacacttaatttatttaaaaaaaacatgttatatagt 8529870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 38509916 - 38510069
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    ||||||||||||||||| ||||||||   ||||||||||||||||| ||||||| |||||||| ||||| ||| ||||||| |||||| ||||||| ||     
T  38509916 ttaggaggggaagggagaggagggttcacttttcatttttaaattacggacactatgaaatgtcttttaaaaaattaacatcttaacacgataaacgata 38510015  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacattttatatagtcc 154  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  38510016 atataatacttcaatcacacttgatttattttagaaaaacatgttatatagtcc 38510069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 51597890 - 51597737
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    ||||||| |||||| || ||| | |||  |||||| |||||||||||| ||||| ||||||| |||||| |||||||||||||||| |||||||||||||    
T  51597890 ttaggagaggaaggaagaggatgatttacttttcaattttaaattatgaacactatgaaatggtttttaaaaagttaacatattaagatgataaacaatc 51597791  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacattttatatagtcc 154  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  51597790 atataatacttcaatcacacttaatttattttaaaaaaacatgttatatagtcc 51597737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 30 - 161
Target Start/End: Original strand, 32951369 - 32951500
Alignment:
Q  30 ttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttat 129  Q
    ||||||||||||||||| ||||||  ||||||||||| || |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  32951369 ttttcatttttaaattacggacacaatgaaatgttttataaaaagttaacatattaacatgataaacgatcgtataatacttcaatcacacttaatttat 32951468  T
Q  130 tttagaaaaacattttatatagtccctaattt 161  Q
    ||||||||||||| || |||||||| ||||||    
T  32951469 tttagaaaaacatgttctatagtccgtaattt 32951500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 17 - 161
Target Start/End: Original strand, 35349502 - 35349644
Alignment:
Q  17 ggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatc 116  Q
    |||||||||||  ||||||||||||||||| ||||||||  ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||     
T  35349502 ggggagggtttacttttcatttttaaattacggacactg--aaatgttttataaaaagttaacatattaacatgataaacaatcatataatacttcaata 35349599  T
Q  117 acacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    || |||| ||||||||||||||| || ||||||||||| ||||||    
T  35349600 acccttagtttattttagaaaaaaatgttatatagtccgtaattt 35349644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 41498627 - 41498466
Alignment:
Q  1 ttaggagggg-aagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaat 99  Q
    |||||||||| ||||||||||||| |||  ||||||||||||||||| ||||||| ||||||||||| || |||||||||||||||||||||||||| ||    
T  41498627 ttaggaggggtaagggaggggaggatttacttttcatttttaaattacggacactatgaaatgttttataaaaagttaacatattaacatgataaacgat 41498528  T
Q  100 catataatacttcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    ||||||||||||||||||||||||| ||||  ||||||| ||| ||| ||||| | ||||||    
T  41498527 catataatacttcaatcacacttaacttatcgtagaaaatcatgttaaatagttcataattt 41498466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 31 - 161
Target Start/End: Original strand, 50744332 - 50744463
Alignment:
Q  31 tttcatttttaaattatggacactgtgaaatgttttttagaa-agttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttat 129  Q
    |||||||||||||||| ||||||| |||||||||||||  || |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  50744332 tttcatttttaaattacggacactatgaaatgtttttttaaagagttaacatattaacatgataaacgatcatataatacttcaatcacacttaatttat 50744431  T
Q  130 tttagaaaaacattttatatagtccctaattt 161  Q
    |||||| |||| | ||||||||||| ||||||    
T  50744432 tttagagaaacctgttatatagtccgtaattt 50744463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 20 - 153
Target Start/End: Original strand, 49946629 - 49946762
Alignment:
Q  20 gagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcaca 119  Q
    |||||||| ||| |||||||||||||| ||||||| | |||| ||||||  |||||||||||||||||||||||||  ||||||||||||||||||||||    
T  49946629 gagggtttatttgtcatttttaaattacggacactataaaatatttttttaaaagttaacatattaacatgataaattatcatataatacttcaatcaca 49946728  T
Q  120 cttaatttattttagaaaaacattttatatagtc 153  Q
     ||||||||||||| |||||||| ||||||||||    
T  49946729 tttaatttattttaaaaaaacatgttatatagtc 49946762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 33 - 161
Target Start/End: Original strand, 45585739 - 45585867
Alignment:
Q  33 tcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttatttt 132  Q
    ||||||||||||||| || ||| | |||||||||||  |||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||    
T  45585739 tcatttttaaattatagatactataaaatgtttttttaaaagttaacatattaacatgataaacgatcatatagtacttcgatcacacttaatttatttt 45585838  T
Q  133 agaaaaacattttatatagtccctaattt 161  Q
    | |||||||| ||||||||||| ||||||    
T  45585839 aaaaaaacatgttatatagtccgtaattt 45585867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 8 - 142
Target Start/End: Complemental strand, 7444710 - 7444576
Alignment:
Q  8 gggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataat 107  Q
    |||||| |||||||||||||  |||||||||| |||||| ||||||| | ||||| |||||| ||||||||||||||||||| |||||| ||||||||||    
T  7444710 gggaagagaggggagggtttagttttcattttaaaattacggacactataaaatgatttttaaaaagttaacatattaacataataaacgatcatataat 7444611  T
Q  108 acttcaatcacacttaatttattttagaaaaacat 142  Q
    |||||||||||||||  |||| |||||||||||||    
T  7444610 acttcaatcacacttggtttaatttagaaaaacat 7444576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 9 - 139
Target Start/End: Complemental strand, 41676495 - 41676363
Alignment:
Q  9 ggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttaga--aagttaacatattaacatgataaacaatcatataa 106  Q
    ||||| |||||||||||||  ||||||||||||||||| ||||||| | |||||||||||     || |||||||||||||||||||||| |||||||||    
T  41676495 ggaagagaggggagggtttacttttcatttttaaattacggacactataaaatgtttttttttttaaattaacatattaacatgataaacgatcatataa 41676396  T
Q  107 tacttcaatcacacttaatttattttagaaaaa 139  Q
    |||| ||||||||||||||||||||||||||||    
T  41676395 tactacaatcacacttaatttattttagaaaaa 41676363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 22 - 142
Target Start/End: Original strand, 36285617 - 36285737
Alignment:
Q  22 gggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacact 121  Q
    |||||| ||| |||||||||||||| | ||||| | |||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  36285617 gggtttatttatcatttttaaattacgaacactataaaatattttttaaaaagttaacatattaacatgataaacgatcatataatacttcaatcacact 36285716  T
Q  122 taatttattttagaaaaacat 142  Q
    | || ||||||| ||||||||    
T  36285717 tgatatattttaaaaaaacat 36285737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 20576155 - 20576269
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    |||||||||||||||||||||| ||||   |||||||||||||||| ||||||||  |||||||||||| | |||||| ||||||||||||||||| |||    
T  20576155 ttaggaggggaagggaggggagagtttagatttcatttttaaattacggacactg--aaatgttttttaaagagttaatatattaacatgataaacgatc 20576252  T
Q  101 atataatacttcaatca 117  Q
    |||||||||||||||||    
T  20576253 atataatacttcaatca 20576269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 63 - 161
Target Start/End: Complemental strand, 10392032 - 10391934
Alignment:
Q  63 ttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    ||||||| ||||||||||||||||||||||||||  ||||||||||||| ||||||| |||||||||||||||||||||| | ||||||||| ||||||    
T  10392032 ttttttaaaaagttaacatattaacatgataaacggtcatataatactttaatcacaattaatttattttagaaaaacatgtaatatagtccgtaattt 10391934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 30 - 148
Target Start/End: Original strand, 26940894 - 26941012
Alignment:
Q  30 ttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttat 129  Q
    |||| ||||||||||||| |||||| |||||| ||| ||  ||||||||| |||||||||  |||||| |||||||||||||||||||||||| ||||||    
T  26940894 tttttatttttaaattatagacactatgaaatatttgtttaaaagttaacttattaacatcgtaaacagtcatataatacttcaatcacacttgatttat 26940993  T
Q  130 tttagaaaaacattttata 148  Q
    ||||||||||||| |||||    
T  26940994 tttagaaaaacatgttata 26941012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 42230740 - 42230619
Alignment:
Q  16 aggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaat 115  Q
    ||||||| ||||| |||| |||||||||     |||||| | |||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||    
T  42230740 aggggagagtttgcttttaatttttaaa-----gacactataaaatgttttttataaagttaaaatattaacataataaacaatcatataatacttcaat 42230646  T
Q  116 cacacttaatttattttagaaaaacat 142  Q
    |||||||||||||||||  ||||||||    
T  42230645 cacacttaatttatttttaaaaaacat 42230619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 15 - 151
Target Start/End: Original strand, 44210943 - 44211077
Alignment:
Q  15 gaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaa 114  Q
    |||||||||||||  ||||| ||||||||||||||||  ||  ||||||| | || ||| |||| |||  |||||||||||| |||||||||||||||||    
T  44210943 gaggggagggtttacttttcgtttttaaattatggaccatg--aaatgttctctaaaaaattaaaataacaacatgataaacgatcatataatacttcaa 44211040  T
Q  115 tcacacttaatttattttagaaaaacattttatatag 151  Q
    |||||||||||||||||||||||||||  ||||||||    
T  44211041 tcacacttaatttattttagaaaaacacgttatatag 44211077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 5 - 153
Target Start/End: Complemental strand, 6563794 - 6563647
Alignment:
Q  5 gaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatat 104  Q
    |||||||| | ||| ||||||||  |||||||||||||||   ||||||| |||| | |||||||  ||||||| |||||||||||||||| | ||||||    
T  6563794 gaggggaaagaaggagagggtttacttttcatttttaaatcgaggacactatgaactattttttaagaagttaatatattaacatgataaaga-tcatat 6563696  T
Q  105 aatacttcaatcacacttaatttattttagaaaaacattttatatagtc 153  Q
    |||| |||||| |||| |||||||||||||||| |||| ||||||||||    
T  6563695 aataattcaatgacacataatttattttagaaagacatgttatatagtc 6563647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 20607439 - 20607311
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtt-tttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaat 99  Q
    |||||||||||||||||||||||||||  | |||  ||||| ||||||||||| | | ||||| ||||| |||| ||||   |||||||||||| |  ||    
T  20607439 ttaggaggggaagggaggggagggtttactatttttttttttaattatggacattataaaatgattttttgaaaattaa---attaacatgatatattat 20607343  T
Q  100 catataatacttcaatcacacttaatttattt 131  Q
    |||||||||||||||  |||||||||||||||    
T  20607342 catataatacttcaaaaacacttaatttattt 20607311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 31 - 146
Target Start/End: Complemental strand, 33643460 - 33643345
Alignment:
Q  31 tttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttatt 130  Q
    |||| ||||||||||||| ||| | | ||||| |||||||||| || |  || ||| ||||| ||  |||||||||||||||||  ||||||||||||||    
T  33643460 tttcttttttaaattatgaacattttaaaatgatttttagaaaattgaattaataatatgatgaatgatcatataatacttcaaaaacacttaatttatt 33643361  T
Q  131 ttagaaaaacatttta 146  Q
    ||| ||||||||||||    
T  33643360 ttaaaaaaacatttta 33643345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 85 - 148
Target Start/End: Original strand, 42742416 - 42742478
Alignment:
Q  85 aacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacattttata 148  Q
    ||||||||||| | ||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  42742416 aacatgataaatagtcatatagtacttcaatcacacttaatttatttta-aaaaacattttata 42742478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 35513019 - 35512909
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    |||||||||||||||||||||||| ||  ||||  ||||||||||||||||| | | ||||| |||||||||| || |  ||  |||||||||||  |||    
T  35513019 ttaggaggggaagggaggggagggcttacttttattttttaaattatggacattataaaatgatttttagaaaattgaattaacaacatgataaatgatc 35512920  T
Q  101 atataatactt 111  Q
    |||||||||||    
T  35512919 atataatactt 35512909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 25268486 - 25268341
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    |||| |||||||| |||||||||||||  ||| | ||||||||||| ||| | | | ||||| |||||||||| || |   |  ||| |||||||  |||    
T  25268486 ttagaaggggaagtgaggggagggtttactttccttttttaaattacggaaattataaaatgatttttagaaaatttaatcaacaacgtgataaatgatc 25268387  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacatttta 146  Q
    ||||||||||||||  ||||||||||||||||| ||| ||||||||    
T  25268386 atataatacttcaaaaacacttaatttattttaaaaatacatttta 25268341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 79 - 152
Target Start/End: Original strand, 2470831 - 2470908
Alignment:
Q  79 catattaacatgataaacaatcatataata----cttcaatcacacttaatttattttagaaaaacattttatatagt 152  Q
    ||||||||||||||||||| ||||||||||    ||||||||||| ||| | |||||||||||||||| |||||||||    
T  2470831 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacatgttatatagt 2470908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 87 - 146
Target Start/End: Original strand, 1085598 - 1085657
Alignment:
Q  87 catgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacatttta 146  Q
    |||||||||  |||||||||||||||||  ||||||||||||||||| ||||||||||||    
T  1085598 catgataaatgatcatataatacttcaaaaacacttaatttattttaaaaaaacatttta 1085657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 43552037 - 43552109
Alignment:
Q  20 gagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaac 96  Q
    |||||||| |||||||||||||||||| |     | |||||||||||||| ||||||||||||||||||||||||||    
T  43552037 gagggtttatttttcatttttaaattacgt----tatgaaatgttttttaaaaagttaacatattaacatgataaac 43552109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 28770943 - 28770852
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataa 94  Q
    ||||||||| || |||| ||||||||| ||||| ||||||||||||   ||| | ||||||||||| || ||| ||||||||||||||||||||    
T  28770943 ttaggagggaaaaggagtggagggtttattttttatttttaaattac--acattatgaaatgttttataaaaaattaacatattaacatgataa 28770852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 149
Target Start/End: Original strand, 50079493 - 50079554
Alignment:
Q  88 atgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacattttatat 149  Q
    ||||||||  |||||||||||||| ||  ||||||||||||||||| |||||||||||||||    
T  50079493 atgataaatgatcatataatactttaaaaacacttaatttattttaaaaaaacattttatat 50079554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 149
Target Start/End: Complemental strand, 2506664 - 2506613
Alignment:
Q  98 atcatataatacttcaatcacacttaatttattttagaaaaacattttatat 149  Q
    |||||||||||||||||  ||||||||||||||||  |||||||||||||||    
T  2506664 atcatataatacttcaaaaacacttaatttattttgaaaaaacattttatat 2506613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 148
Target Start/End: Complemental strand, 27739189 - 27739127
Alignment:
Q  85 aacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacattttata 148  Q
    |||||||||||  |||||  |||||||||||||||||||||| |||||| ||||||||||||||    
T  27739189 aacatgataaatgatcattaaatacttcaatcacacttaattgatttta-aaaaacattttata 27739127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 144
Target Start/End: Complemental strand, 35927951 - 35927892
Alignment:
Q  85 aacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacattt 144  Q
    |||||||||||  |||||||||||||||||  | ||||||||||||||||||||| ||||    
T  35927951 aacatgataaatgatcatataatacttcaaaaatacttaatttattttagaaaaatattt 35927892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 40964792 - 40964717
Alignment:
Q  30 ttttcatttttaaattatggacactgtgaaatgttttttagaaa-gttaacatattaacatgataaacaatcatat 104  Q
    ||||||||||||||||| |||||| || |||| ||||||  ||| |||||||||||||| |||||||| |||||||    
T  40964792 ttttcatttttaaattacggacaccgtcaaatattttttttaaaagttaacatattaacgtgataaaccatcatat 40964717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 85 - 139
Target Start/End: Original strand, 51303490 - 51303544
Alignment:
Q  85 aacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaa 139  Q
    |||||||||||  |||||||||||||||||  ||||||||||||||||| |||||    
T  51303490 aacatgataaatgatcatataatacttcaaaaacacttaatttattttaaaaaaa 51303544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 146
Target Start/End: Complemental strand, 47071244 - 47071128
Alignment:
Q  30 ttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttat 129  Q
    ||||| ||||||||||| ||||| | | ||||| |||||||||| || |  ||  |||||||||||  |||||| |||| |||||  |||||||| ||||    
T  47071244 ttttcttttttaaattacggacattataaaatgatttttagaaaatttaattaacaacatgataaatgatcataaaatatttcaaaaacacttaacttat 47071145  T
Q  130 tttagaaaaacatttta 146  Q
    |||  ||||||||||||    
T  47071144 tttgaaaaaacatttta 47071128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 149
Target Start/End: Complemental strand, 49832669 - 49832621
Alignment:
Q  101 atataatacttcaatcacacttaatttattttagaaaaacattttatat 149  Q
    ||||||||||||||||||||||| ||||||||  ||||||| |||||||    
T  49832669 atataatacttcaatcacacttattttatttttaaaaaacactttatat 49832621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 41498426 - 41498473
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatg 48  Q
    ||||||||||||| |||||||||||||  ||||| |||||||||||||    
T  41498426 ttaggaggggaagtgaggggagggtttacttttcgtttttaaattatg 41498473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 49065579 - 49065548
Alignment:
Q  99 tcatataatacttcaatcacacttaatttatt 130  Q
    ||||||||||||||||||||||||||||||||    
T  49065579 tcatataatacttcaatcacacttaatttatt 49065548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 85 - 132
Target Start/End: Complemental strand, 51582119 - 51582072
Alignment:
Q  85 aacatgataaacaatcatataatacttcaatcacacttaatttatttt 132  Q
    |||||||||||  ||||| |||||||||||||||||| ||||||||||    
T  51582119 aacatgataaatgatcatgtaatacttcaatcacactgaatttatttt 51582072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 2859154 - 2859104
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggac 51  Q
    |||||||||||||||||||||||||||  ||||  ||||||||||| ||||    
T  2859154 ttaggaggggaagggaggggagggtttacttttattttttaaattacggac 2859104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 10391894 - 10391944
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggac 51  Q
    ||||||||||||  |||||||||||||  ||||||||||||||||| ||||    
T  10391894 ttaggaggggaaacgaggggagggtttacttttcatttttaaattacggac 10391944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 35349680 - 35349634
Alignment:
Q  5 gaggggaagggaggggagggtttgtttttcatttttaaattatggac 51  Q
    |||||||||||||||||||||||  ||||| ||||||||||| ||||    
T  35349680 gaggggaagggaggggagggtttacttttcgtttttaaattacggac 35349634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 38510116 - 38510074
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaa 43  Q
    |||||||||||||||||||||||||||  ||||| ||||||||    
T  38510116 ttaggaggggaagggaggggagggtttagttttcttttttaaa 38510074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 148
Target Start/End: Original strand, 51303695 - 51303744
Alignment:
Q  98 atcatataatacttcaatcacacttaatttattttagaaaaacattttata 148  Q
    ||||||||||| ||||||||||||||||| | |||| ||||||||||||||    
T  51303695 atcatataatagttcaatcacacttaattga-tttaaaaaaacattttata 51303744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 175 - 208
Target Start/End: Original strand, 12234205 - 12234238
Alignment:
Q  175 taaaccctctcctcccttcccctcctaaaccctc 208  Q
    ||||||||| ||||||||||||||||||||||||    
T  12234205 taaaccctcccctcccttcccctcctaaaccctc 12234238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 175 - 208
Target Start/End: Original strand, 20607412 - 20607445
Alignment:
Q  175 taaaccctctcctcccttcccctcctaaaccctc 208  Q
    ||||||||| ||||||||||||||||||||||||    
T  20607412 taaaccctcccctcccttcccctcctaaaccctc 20607445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 51
Target Start/End: Complemental strand, 50744490 - 50744453
Alignment:
Q  14 ggaggggagggtttgtttttcatttttaaattatggac 51  Q
    ||||||||||||||||||||| ||||||||||| ||||    
T  50744490 ggaggggagggtttgtttttcttttttaaattacggac 50744453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 207
Target Start/End: Original strand, 38510089 - 38510121
Alignment:
Q  175 taaaccctctcctcccttcccctcctaaaccct 207  Q
    ||||||||| |||||||||||||||||||||||    
T  38510089 taaaccctcccctcccttcccctcctaaaccct 38510121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 150
Target Start/End: Original strand, 43553049 - 43553101
Alignment:
Q  98 atcatataatacttcaatcacacttaatttattttagaaaaacattttatata 150  Q
    ||||||||||| |||| | ||||||||||||||||||| |||||  |||||||    
T  43553049 atcatataatatttcagtaacacttaatttattttagagaaacaagttatata 43553101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 105; Significance: 1e-52; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 5 - 161
Target Start/End: Original strand, 31543098 - 31543254
Alignment:
Q  5 gaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatat 104  Q
    |||||||||||||||||||||||  ||||||||||||||||| ||| ||| |||||||||||| | ||||||||||||||||||| ||||||  ||||||    
T  31543098 gaggggaagggaggggagggtttacttttcatttttaaattacggaaactatgaaatgtttttaaaaaagttaacatattaacatcataaacggtcatat 31543197  T
Q  105 aatacttcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||    
T  31543198 aatacttcaatcacacttaatttattttagaaaaacatgttatatggtccataattt 31543254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 11575429 - 11575577
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    ||||||| ||||||||||| |||||||  |||||||| |||||||| ||| ||| |||||||||||||| |||||||||||||||||||||||||| |||    
T  11575429 ttaggagaggaagggaggg-agggtttacttttcattcttaaattaaggatactatgaaatgttttttaaaaagttaacatattaacatgataaacgatc 11575527  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacattttatata 150  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  11575528 atataatactttaatcacacttaatttattttagaaaaacatgttatata 11575577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 13 - 161
Target Start/End: Original strand, 7502988 - 7503136
Alignment:
Q  13 gggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttc 112  Q
    |||||||||||||||| ||| |||||||||||||   | ||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||     
T  7502988 gggaggggagggtttgctttccatttttaaattaccaaaactatgaaatgttttataaaaagttaacatattaacatgataaacaatcatataatacttt 7503087  T
Q  113 aatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    |||||||||||||||||||||||||||||| ||||||| ||| ||||||    
T  7503088 aatcacacttaatttattttagaaaaacatgttatataatccataattt 7503136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 5 - 161
Target Start/End: Complemental strand, 16653167 - 16653011
Alignment:
Q  5 gaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatat 104  Q
    |||||||||||||| ||||||||  ||||||||||||||||| ||||| | |||||||||||| | ||||||||||||||||||  |||||| |||||||    
T  16653167 gaggggaagggaggagagggtttaattttcatttttaaattacggacattatgaaatgtttttgaaaaagttaacatattaacaaaataaacgatcatat 16653068  T
Q  105 aatacttcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    |||||||||||||||||| |||||||||| |||||||| ||||||||||| ||||||    
T  16653067 aatacttcaatcacacttgatttattttataaaaacatgttatatagtccgtaattt 16653011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 11785748 - 11785588
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    ||||||||| ||| || ||||||||||| ||||||||||||||||| ||||| | |||||| ||||||| ||||||| |||||||||||||||||||| |    
T  11785748 ttaggagggtaagagaagggagggtttgattttcatttttaaattacggacattatgaaatattttttaaaaagttagcatattaacatgataaacaaac 11785649  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    |||||||||||||||| || ||||| |||||||||||||||| ||||||||| | ||||||    
T  11785648 atataatacttcaatcgcaattaatgtattttagaaaaacatgttatatagttcataattt 11785588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 14 - 161
Target Start/End: Original strand, 1026884 - 1027030
Alignment:
Q  14 ggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttca 113  Q
    ||||||||||||||  ||||||||||||||||  ||||||| |||||| |||| |  |||||||||||||||||||||||||| ||||||||||||||||    
T  1026884 ggaggggagggtttacttttcatttttaaattgcggacactatgaaatattttatcaaaagttaacatattaacatgataaacgatcatataatacttca 1026983  T
Q  114 atcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    |||| ||||||||||||||||||||||| |||||||||||| ||||||    
T  1026984 atcatacttaatttattttagaaaaaca-tttatatagtccgtaattt 1027030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 14 - 161
Target Start/End: Original strand, 9718514 - 9718661
Alignment:
Q  14 ggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttca 113  Q
    ||||||||||||| | ||||||||||||||||| ||||||| ||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  9718514 ggaggggagggttcgattttcatttttaaattacggacactatgaaatggtttttaaaaagttagcatattaacatgataaacaatcatataatacttca 9718613  T
Q  114 atcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    |||||| |||||  |||||||||||| || ||||||||| | ||||||    
T  9718614 atcacaattaatgaattttagaaaaatatgttatatagttcataattt 9718661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 36309065 - 36308912
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    |||||||||||||||||||||||||||  ||||||| ||||||||| | ||| |||||||| | ||||  ||||| ||||||||||||||||||||||||    
T  36309065 ttaggaggggaagggaggggagggtttacttttcatctttaaattacgtacattgtgaaatatatttttaaaagtaaacatattaacatgataaacaatc 36308966  T
Q  101 atataatacttcaatcacacttaatttatttta-gaaaaacattttatatagtc 153  Q
    ||||||||||||||||||||||| |||||||||  |||||||| ||||||||||    
T  36308965 atataatacttcaatcacacttagtttattttataaaaaacatgttatatagtc 36308912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 41103526 - 41103678
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaa--ttatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaa 98  Q
    ||||||||||||| |||||||||||||| ||||| ||||||||  ||||||||||| ||||| |||||| | ||| |||| | | ||||||||||||| |    
T  41103526 ttaggaggggaagagaggggagggtttgattttcgtttttaaaaattatggacactatgaaacgtttttaaaaaaattaaaacaataacatgataaacga 41103625  T
Q  99 tcatataatacttcaatcacacttaatttattttagaaaaacattttatatag 151  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  41103626 tcatataatacttcaatcacacttaatttattttagaaaaacatgttatatag 41103678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 9 - 161
Target Start/End: Complemental strand, 1281357 - 1281205
Alignment:
Q  9 ggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataata 108  Q
    ||||||||||||||| |||  ||||||||||||||||| ||||||| |||||| ||||||| ||||||||||||||||||| |||||| || ||||||||    
T  1281357 ggaagggaggggaggatttagttttcatttttaaattacggacactatgaaatattttttaaaaagttaacatattaacataataaacgataatataata 1281258  T
Q  109 cttcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    |||||| ||||||| |||||| |||||||||||| |||||| |||| ||||||    
T  1281257 cttcaaccacacttgatttatcttagaaaaacatgttatatcgtccgtaattt 1281205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 28 - 160
Target Start/End: Complemental strand, 6315257 - 6315125
Alignment:
Q  28 gtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaattt 127  Q
    |||||||||||||||| || ||||||| |||||||||||| | ||| ||||||||||||| |||||||| ||| ||||||||||||||||||||||||||    
T  6315257 gtttttcatttttaaaatacggacactatgaaatgtttttaaaaaaattaacatattaacttgataaacgatcgtataatacttcaatcacacttaattt 6315158  T
Q  128 attttagaaaaacattttatatagtccctaatt 160  Q
    ||||||||||||||| ||||||||||| |||||    
T  6315157 attttagaaaaacatgttatatagtccgtaatt 6315125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 31738645 - 31738493
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    |||||||||||||  ||||||||||||   |||||||||||||||| ||||||| | |||| ||||||  | |||||||||||||||||||||||  |||    
T  31738645 ttaggaggggaagaaaggggagggtttaaatttcatttttaaattacggacactataaaatattttttgaagagttaacatattaacatgataaatgatc 31738546  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacattttatatagtc 153  Q
    ||||||||||||||| |||||||||||||| |||| |||||| ||||||||||    
T  31738545 atataatacttcaattacacttaatttattctagagaaacatgttatatagtc 31738493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 30 - 161
Target Start/End: Complemental strand, 7979333 - 7979202
Alignment:
Q  30 ttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttat 129  Q
    ||||||||||||||||| |||||| ||||||||||| ||| ||  ||||| ||||||||||||||| |||||||||||||||||||  ||||| ||||||    
T  7979333 ttttcatttttaaattacggacaccgtgaaatgtttattaaaagtttaacttattaacatgataaataatcatataatacttcaattgcacttgatttat 7979234  T
Q  130 tttagaaaaacattttatatagtccctaattt 161  Q
    ||||||||||||| ||||||||||| ||||||    
T  7979233 tttagaaaaacatgttatatagtccgtaattt 7979202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 30 - 153
Target Start/End: Original strand, 37923129 - 37923252
Alignment:
Q  30 ttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttat 129  Q
    ||||||||||||||||||| ||||| |||||||||||||| | |||||| ||||||||||||||||  ||||||||||| || |||| ||||||||||||    
T  37923129 ttttcatttttaaattatgaacactatgaaatgttttttaaagagttaaaatattaacatgataaatgatcatataatattttaatcgcacttaatttat 37923228  T
Q  130 tttagaaaaacattttatatagtc 153  Q
    ||||||||||||| ||||||||||    
T  37923229 tttagaaaaacatgttatatagtc 37923252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 14 - 161
Target Start/End: Original strand, 40990216 - 40990366
Alignment:
Q  14 ggaggggagggtttgtttttcatttttaaatt-atggacactgtgaaatgttttttagaaag--ttaacatattaacatgataaacaatcatataatact 110  Q
    |||||||||||||| | |||||||||| |||| || |||||| |||||||||||||  ||||  |||||||||||||||||||| | |||||||||||||    
T  40990216 ggaggggagggtttatatttcattttttaatttatagacactatgaaatgttttttttaaagagttaacatattaacatgataagcgatcatataatact 40990315  T
Q  111 tcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    ||||||| ||||||||||||||| | |||||| ||||||||||| ||||||    
T  40990316 tcaatcagacttaatttattttaaagaaacatgttatatagtccgtaattt 40990366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 30479739 - 30479880
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    |||||||||| | ||||||||| |||   |||||||||||||||||  |||||| |||||||| ||||| ||||||||||||||||  |||||||  ||     
T  30479739 ttaggagggggatggaggggagagttcacttttcatttttaaattacagacactatgaaatgtcttttaaaaagttaacatattaaggtgataaatgata 30479838  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacat 142  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  30479839 atataatacttcaatcacacttgatttattttagaaaaacat 30479880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 41 - 153
Target Start/End: Complemental strand, 37032561 - 37032449
Alignment:
Q  41 aaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaac 140  Q
    |||||| |||||||  ||| ||||||||| |||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||| ||||||    
T  37032561 aaattacggacactaggaagtgttttttaaaaagttaacatattaagatgataaactatcatataatactttaatcacacttaatttattttaaaaaaac 37032462  T
Q  141 attttatatagtc 153  Q
    || ||||||||||    
T  37032461 atgttatatagtc 37032449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 11033640 - 11033486
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgtttttt-agaaagttaacatattaacatgataaacaat 99  Q
    |||||||| ||||||||| || | |||  |||||| |||||||||||| | | | ||||||||||||| | ||| |||||||||||||||||||||| ||    
T  11033640 ttaggaggagaagggaggagaagatttacttttcaattttaaattatgaatattatgaaatgtttttttaaaaaattaacatattaacatgataaacgat 11033541  T
Q  100 catataatacttcaatcacacttaatttattttagaaaaacattttatatagtcc 154  Q
    ||||||||  ||||||||||| |||||||||||||||||||||  ||||||||||    
T  11033540 catataattattcaatcacacataatttattttagaaaaacatgatatatagtcc 11033486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 31 - 149
Target Start/End: Complemental strand, 28083934 - 28083816
Alignment:
Q  31 tttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttatt 130  Q
    |||| ||||||||||| ||| ||| ||| |||||||||| | ||||||||| | |||||||||||||||||||||||||| |||||||||||||||||||    
T  28083934 tttcttttttaaattacggatactatgatatgttttttaaagagttaacatgtcaacatgataaacaatcatataatactccaatcacacttaatttatt 28083835  T
Q  131 ttagaaaaacattttatat 149  Q
    ||||| |||||| ||||||    
T  28083834 ttagagaaacatgttatat 28083816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 9 - 150
Target Start/End: Complemental strand, 2248666 - 2248525
Alignment:
Q  9 ggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataata 108  Q
    ||||||||||||||||||   |||| |||||||||||| ||||||| |||||| ||||||  ||||||||| |||||||||  |||||  ||||||||||    
T  2248666 ggaagggaggggagggttcactttttatttttaaattacggacactatgaaatatttttttaaaagttaacttattaacatcgtaaacggtcatataata 2248567  T
Q  109 cttcaatcacacttaatttattttagaaaaacattttatata 150  Q
     | ||||||||||| ||||||||||||||||||| |||||||    
T  2248566 ttccaatcacacttgatttattttagaaaaacatgttatata 2248525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 56 - 161
Target Start/End: Original strand, 42650410 - 42650518
Alignment:
Q  56 tgaaatgttttttagaaagttaacatat--ta-acatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacattttatatagt 152  Q
    ||||||||||| || |||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |    
T  42650410 tgaaatgttttataaaaagttaacatatgttatacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacatgttatatatt 42650509  T
Q  153 ccctaattt 161  Q
    || ||||||    
T  42650510 ccgtaattt 42650518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 24 - 153
Target Start/End: Complemental strand, 30664560 - 30664431
Alignment:
Q  24 gtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacactta 123  Q
    |||| ||||||| |||||||||| ||||| |   |||| ||||||| |||||||||||||||| |||||||||  | |||||||||||||||||||||||    
T  30664560 gtttatttttcagttttaaattacggacattacaaaatattttttaaaaagttaacatattaatatgataaacggttatataatacttcaatcacactta 30664461  T
Q  124 atttattttagaaaaacattttatatagtc 153  Q
    ||||||||| ||||||||| ||||| ||||    
T  30664460 atttatttttgaaaaacatgttataaagtc 30664431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 30 - 150
Target Start/End: Original strand, 29358391 - 29358510
Alignment:
Q  30 ttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttat 129  Q
    |||| |||||||||||| ||||||| | |||| ||||||| ||| ||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||    
T  29358391 tttttatttttaaattacggacactataaaatattttttaaaaa-ttaacatattaacattataaacgatcctataatacttcaatcacacttaatttat 29358489  T
Q  130 tttagaaaaacattttatata 150  Q
    | |||||||| || |||||||    
T  29358490 tctagaaaaatatgttatata 29358510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 3726885 - 3727029
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    ||||||||||||||||  ||| ||||| |||||||||||||||||| ||||||  || ||||||||||| | ||||||        ||||||||||  ||    
T  3726885 ttaggaggggaagggaaaggacggtttatttttcatttttaaattacggacaccatggaatgttttttaaatagttaa--------catgataaacggtc 3726976  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacattttatatagtc 153  Q
    |||||||| ||||||||  ||||||||||||||||||||||| ||||||||||    
T  3726977 atataatatttcaatcatgcttaatttattttagaaaaacatgttatatagtc 3727029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 6 - 161
Target Start/End: Original strand, 12022170 - 12022325
Alignment:
Q  6 aggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatata 105  Q
    ||||||||||||||||||| ||  ||||| ||||||||||| | ||| | | ||||| |||||||||| || |  ||  |||||||||||  ||||||||    
T  12022170 aggggaagggaggggagggcttacttttcttttttaaattacgaacattataaaatgatttttagaaaattgaattaacaacatgataaatgatcatata 12022269  T
Q  106 atacttcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    |||||||||  ||||||||||||||||| |||||||||||| || |||| ||||||    
T  12022270 atacttcaaaaacacttaatttattttaaaaaaacattttacattgtccgtaattt 12022325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 63 - 154
Target Start/End: Complemental strand, 33922680 - 33922589
Alignment:
Q  63 ttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacattttatatagtcc 154  Q
    ||||||| ||||||||||||||| |||||||||||||||||| |||||||||||| ||| ||||||||||| ||||| || |||||||||||    
T  33922680 ttttttaaaaagttaacatattatcatgataaacaatcatatcatacttcaatcatactaaatttattttaaaaaaatatgttatatagtcc 33922589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 30 - 142
Target Start/End: Original strand, 4247569 - 4247680
Alignment:
Q  30 ttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttat 129  Q
    |||| |||||||||||| || |||| | |||| |||||||  |||||||||||||| |||||||||| |||||||||||||| ||||| |||||||||||    
T  4247569 tttttatttttaaattacgg-cactttaaaatattttttaagaagttaacatattagcatgataaacgatcatataatacttaaatcatacttaatttat 4247667  T
Q  130 tttagaaaaacat 142  Q
    |||| ||||||||    
T  4247668 tttaaaaaaacat 4247680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 16024375 - 16024227
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    |||||||||||||||||||||| ||||  ||||| ||||||||||| ||||| | | ||||| |||||||||| || |  ||  |||||||||||  |||    
T  16024375 ttaggaggggaagggaggggagagtttacttttc-tttttaaattacggacattataaaatgatttttagaaaattgaattaacaacatgataaatgatc 16024277  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaa-cattttatat 149  Q
    ||||||||||||||  ||||||||||||||| | ||||| ||||||||||    
T  16024276 atataatacttcaaaaacacttaatttatttaaaaaaaatcattttatat 16024227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 34634365 - 34634260
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    |||||||||||||||| | |||||||  ||||| |||||||||||| ||||||| |||||| | ||||| |||||||||||||||||||  ||||||||     
T  34634365 ttaggaggggaagggatgtgagggttcattttttatttttaaattacggacactatgaaatatcttttaaaaagttaacatattaacattgtaaacaata 34634266  T
Q  101 atataa 106  Q
    ||||||    
T  34634265 atataa 34634260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 43732909 - 43732778
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    |||||||||||||||||||||||||||  ||||| ||||||||||| ||||| | | ||||| ||||| |||| || |  ||  || ||||||||  |||    
T  43732909 ttaggaggggaagggaggggagggtttacttttcttttttaaattacggacattataaaatgattttttgaaaattgaattaacaatatgataaatgatc 43732810  T
Q  101 atataatacttcaatcacacttaatttatttt 132  Q
    ||||||||||||||  ||||||||||||||||    
T  43732809 atataatacttcaaaaacacttaatttatttt 43732778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 57 - 124
Target Start/End: Original strand, 29691000 - 29691067
Alignment:
Q  57 gaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaa 124  Q
    ||||| ||||| | |||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  29691000 gaaatatttttaaaaaagttaacatattaacatgataaacgatcatatgatacttcaatcacacttaa 29691067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 75 - 153
Target Start/End: Complemental strand, 13405124 - 13405046
Alignment:
Q  75 ttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacattttatatagtc 153  Q
    ||||| |||||||||||||||| ||||||||||| |||||| | |  ||||||||||||||||||||| ||||||||||    
T  13405124 ttaacgtattaacatgataaacgatcatataataattcaattatatataatttattttagaaaaacatgttatatagtc 13405046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 85 - 148
Target Start/End: Complemental strand, 27487128 - 27487065
Alignment:
Q  85 aacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacattttata 148  Q
    |||||||||||  |||||||||||||||||| ||||||||||  ||||||||||||||||||||    
T  27487128 aacatgataaatgatcatataatacttcaataacacttaattggttttagaaaaacattttata 27487065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 30365352 - 30365206
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    |||| |||| |||||||||||||| ||  ||||| |||||||||||  |||| | ||||||| |||||||||| || |  ||  |||||||||||  ||     
T  30365352 ttagaagggtaagggaggggagggcttccttttcttttttaaattacagacattatgaaatgatttttagaaaattgaattaacaacatgataaatgatt 30365253  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacattttat 147  Q
    |||||| |||||||  |||||||||||||| || ||||| |||||||    
T  30365252 atataacacttcaaaaacacttaatttattctaaaaaaatattttat 30365206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 10028345 - 10028172
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaa-gttaacatattaacatgat------- 92  Q
    ||||||| ||||| |||||||||||||  |||| | |||||||||| ||||||| |||||| ||||||  ||| ||||||||||||| ||| |           
T  10028345 ttaggagaggaagtgaggggagggtttactttttacttttaaattacggacactatgaaatattttttttaaaagttaacatattaatatggtccgtaat 10028246  T
Q  93 -----aaacaatcatataatacttcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
         |||| ||||||||| ||||||| |||||||||||||||||| ||||| || |||||| |||| ||||||    
T  10028245 atggtaaacgatcatataagacttcaaccacacttaatttattttaaaaaaatatgttatatggtccgtaattt 10028172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 139
Target Start/End: Original strand, 35694832 - 35694915
Alignment:
Q  56 tgaaatgttttttagaaagttaacatattaac-atgataaacaatcatataatacttcaatcacacttaatttattttagaaaaa 139  Q
    |||||| ||||||| ||||||||||||||||  || |||| | ||||||||||||||||||||||||| |||||||||| |||||    
T  35694832 tgaaatattttttaaaaagttaacatattaaatataataa-cgatcatataatacttcaatcacacttgatttattttaaaaaaa 35694915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 6453406 - 6453268
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    |||| ||||||||| ||||||||  ||| ||||| |||||||||||    || | | ||||| |||||||||| || |  || |||||||||||  ||||    
T  6453406 ttagaaggggaaggaaggggaggacttgcttttcctttttaaattacaatcattataaaatgatttttagaaaattgaattaataacatgataagtaatc 6453307  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaa 139  Q
    ||||||||||||||  ||||||||| ||||||| |||||    
T  6453306 atataatacttcaaaaacacttaatatattttaaaaaaa 6453268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 31543294 - 31543244
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggac 51  Q
    |||||||||||||||||||||||||||  ||||| ||||||||||||||||    
T  31543294 ttaggaggggaagggaggggagggtttacttttcttttttaaattatggac 31543244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 24243100 - 24243199
Alignment:
Q  30 ttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttat 129  Q
    |||||||||| |||||| | ||||| | |||||| ||||| ||| | || ||| ||||||||||||  ||||||||||||||||||||||||||||| ||    
T  24243100 ttttcattttgaaattacg-acactataaaatgtcttttaaaaattgaa-ataataacatgataaatgatcatataatacttcaatcacacttaattaat 24243197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 87 - 147
Target Start/End: Complemental strand, 27483696 - 27483636
Alignment:
Q  87 catgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacattttat 147  Q
    |||||||||  |||||||||||||||||| |||||| |||||||| | |||||||||||||    
T  27483696 catgataaattatcatataatacttcaataacactttatttatttaaaaaaaacattttat 27483636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 85 - 133
Target Start/End: Original strand, 30581916 - 30581964
Alignment:
Q  85 aacatgataaacaatcatataatacttcaatcacacttaatttatttta 133  Q
    |||||||||||  |||||||||||||||||||||||||||||| |||||    
T  30581916 aacatgataaatgatcatataatacttcaatcacacttaatttgtttta 30581964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 141
Target Start/End: Complemental strand, 34633859 - 34633819
Alignment:
Q  101 atataatacttcaatcacacttaatttattttagaaaaaca 141  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  34633859 atataatacttcaatcacacttgatttattttagaaaaaca 34633819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 8815363 - 8815296
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgtttttt 68  Q
    |||||||||| |||||||||||||||   |||| |||||||||||| | ||||||| |||||||||||    
T  8815363 ttaggagggggagggaggggagggttcacttttaatttttaaattacgaacactgtaaaatgtttttt 8815296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 148
Target Start/End: Original strand, 38198155 - 38198217
Alignment:
Q  85 aacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacattttata 148  Q
    ||||||||| |  ||||||||||||||||||||||||||||| |||||| ||||||| ||||||    
T  38198155 aacatgatatatgatcatataatacttcaatcacacttaattcatttta-aaaaacactttata 38198217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 1227884 - 1227930
Alignment:
Q  98 atcatataatacttcaatcacacttaatttattttagaaaaacattt 144  Q
    |||||||||||||||||||||| ||||  ||||||||| ||||||||    
T  1227884 atcatataatacttcaatcacatttaacatattttagacaaacattt 1227930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 7503173 - 7503127
Alignment:
Q  4 ggaggggaagggaggggagggtttgtttttcatttttaaattatgga 50  Q
    |||||||| |||||||||||||||  ||||| |||||||||||||||    
T  7503173 ggaggggaggggaggggagggtttacttttcgtttttaaattatgga 7503127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 34196529 - 34196409
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    ||||||||||||||| |||||||| ||  ||||| |||||||||||  |||| | | ||||| |||||||||| || |  ||  |||| ||||||| |||    
T  34196529 ttaggaggggaaggg-ggggagggcttacttttc-tttttaaattacagacattataaaatgatttttagaaaattgaattaacaacaagataaacgatc 34196432  T
Q  101 atataatacttcaatcacactta 123  Q
    ||||||||||||||  |||||||    
T  34196431 atataatacttcaaaaacactta 34196409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 40990406 - 40990356
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggac 51  Q
    ||||||| |||||||||| ||| ||||||||||| ||||||||||| ||||    
T  40990406 ttaggagaggaagggaggagagagtttgtttttcttttttaaattacggac 40990356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 175 - 208
Target Start/End: Complemental strand, 1281192 - 1281159
Alignment:
Q  175 taaaccctctcctcccttcccctcctaaaccctc 208  Q
    ||||||||||| ||||||||||||||||||||||    
T  1281192 taaaccctctcatcccttcccctcctaaaccctc 1281159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 11575628 - 11575583
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaatta 46  Q
    |||||| | ||||||||||||||||||  |||||||||||||||||    
T  11575628 ttaggatgagaagggaggggagggtttacttttcatttttaaatta 11575583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 28083764 - 28083809
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaatta 46  Q
    |||||||||||||||||| |||  |||||||||| |||||||||||    
T  28083764 ttaggaggggaagggaggagagattttgtttttcttttttaaatta 28083809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 175 - 208
Target Start/End: Original strand, 31543267 - 31543300
Alignment:
Q  175 taaaccctctcctcccttcccctcctaaaccctc 208  Q
    ||||||||| ||||||||||||||||||||||||    
T  31543267 taaaccctcccctcccttcccctcctaaaccctc 31543300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 175 - 208
Target Start/End: Original strand, 36309038 - 36309071
Alignment:
Q  175 taaaccctctcctcccttcccctcctaaaccctc 208  Q
    ||||||||| ||||||||||||||||||||||||    
T  36309038 taaaccctcccctcccttcccctcctaaaccctc 36309071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 175 - 208
Target Start/End: Original strand, 43732882 - 43732915
Alignment:
Q  175 taaaccctctcctcccttcccctcctaaaccctc 208  Q
    ||||||||| ||||||||||||||||||||||||    
T  43732882 taaaccctcccctcccttcccctcctaaaccctc 43732915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 85 - 146
Target Start/End: Complemental strand, 43826470 - 43826409
Alignment:
Q  85 aacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacatttta 146  Q
    |||||||||||  |||||| ||||||||||  |||||||| |||||||  ||||||||||||    
T  43826470 aacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacatttta 43826409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 146
Target Start/End: Original strand, 8671913 - 8671961
Alignment:
Q  98 atcatataatacttcaatcacacttaatttattttagaaaaacatttta 146  Q
    |||||||||||||||||  | ||||||||||||||| ||| ||||||||    
T  8671913 atcatataatacttcaaaaatacttaatttattttaaaaatacatttta 8671961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 133
Target Start/End: Complemental strand, 26167894 - 26167846
Alignment:
Q  85 aacatgataaacaatcatataatacttcaatcacacttaatttatttta 133  Q
    |||||||||||  |||||||||||||||||| || ||| ||||||||||    
T  26167894 aacatgataaatgatcatataatacttcaataactctttatttatttta 26167846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 30582033 - 30581985
Alignment:
Q  3 aggaggggaagggaggggagggtttgtttttcatttttaaattatggac 51  Q
    |||||||||||||||||||||| ||  ||||| ||||||||||| ||||    
T  30582033 aggaggggaagggaggggagggcttacttttcttttttaaattacggac 30581985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 148
Target Start/End: Complemental strand, 34552696 - 34552637
Alignment:
Q  88 atgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacattttata 148  Q
    ||||||||  |||||||||||||||||| || ||||||| |||||| ||||||||| ||||    
T  34552696 atgataaatgatcatataatacttcaattacgcttaattaatttta-aaaaacattatata 34552637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 148
Target Start/End: Original strand, 42919838 - 42919897
Alignment:
Q  88 atgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacattttata 148  Q
    |||||||| ||||||| ||||||||||| | | ||||||||||||| ||||| ||||||||    
T  42919838 atgataaataatcataaaatacttcaattatatttaatttatttta-aaaaatattttata 42919897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 103; Significance: 2e-51; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 33655148 - 33655290
Alignment:
Q  19 ggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcac 118  Q
    |||||||||  ||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||    
T  33655148 ggagggtttacttttcatttttaaattacggacactatgaaatgttttttaaaaagttaacatattaacatgataaatgatcatataatacttcaatcac 33655247  T
Q  119 acttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    |||||||||||||||||||||||| |||||||| || ||||||    
T  33655248 acttaatttattttagaaaaacatgttatatagcccataattt 33655290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 4 - 161
Target Start/End: Original strand, 40196557 - 40196714
Alignment:
Q  4 ggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcata 103  Q
    |||||||||||||| |||||||||  ||||||||||| ||||| ||||||| | ||||||||| || ||||||||||||| ||| |||||||||||||||    
T  40196557 ggaggggaagggagaggagggtttacttttcatttttgaattacggacactataaaatgttttataaaaagttaacatatcaacctgataaacaatcata 40196656  T
Q  104 taatacttcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||    
T  40196657 taatacttcaatcacacttaatttattttagaaaaacatgttatatattccgtaattt 40196714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 24970188 - 24970347
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    |||||||||||||| |||||| | |||  ||||||||||||||||| ||| ||| |||||| ||||||| ||||||||||||||||| |||||||| |||    
T  24970188 ttaggaggggaagg-aggggatgatttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacttgataaacgatc 24970286  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||    
T  24970287 atataatacttcaatcacacttaatttattttagaaaaacatgttatataatccataattt 24970347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 41496979 - 41497139
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    ||||||||||||||||||||| | |||  |||| |||||||||||| ||||| |  ||||||||||||| ||| |||||||||||||||||||||  |||    
T  41496979 ttaggaggggaagggaggggatgatttactttttatttttaaattacggacaataggaaatgttttttaaaaatttaacatattaacatgataaatgatc 41497078  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  41497079 atataattcttcaatcacacttaatttattttagaaaaacatgttatatagtccgtaattt 41497139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 4833553 - 4833703
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    |||||||||||||||||||||||||||  |||||||||||||||||  |||||| ||||||||||| || ||||||||| ||||||||||||||||||||    
T  4833553 ttaggaggggaagggaggggagggtttacttttcatttttaaattacagacactatgaaatgttttataaaaagttaacctattaacatgataaacaatc 4833652  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacattttatatag 151  Q
    ||||||||||| ||||||| ||||||||||||| ||  |||| ||||||||    
T  4833653 atataatacttaaatcacatttaatttattttaaaattacatgttatatag 4833703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 5 - 161
Target Start/End: Complemental strand, 47391074 - 47390917
Alignment:
Q  5 gaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaa-tcata 103  Q
    |||||||||||||||||| ||||| ||||||||||||||||| ||||||| | |||  ||||||| || ||||||||||||||||||||||||| |||||    
T  47391074 gaggggaagggaggggagagtttggttttcatttttaaattacggacactataaaacattttttaaaatgttaacatattaacatgataaacaagtcata 47390975  T
Q  104 taatacttcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    |||||||||||||||| ||||| |||||||||||||||| ||||||||| | ||||||    
T  47390974 taatacttcaatcacaattaatgtattttagaaaaacatgttatatagttcataattt 47390917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 30 - 161
Target Start/End: Original strand, 34235058 - 34235190
Alignment:
Q  30 ttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttat 129  Q
    ||||||||||||||||| ||||||| ||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  34235058 ttttcatttttaaattacggacactatgaaatgttttataaaaagttaacatattaatatgataaacaatcatataatacttcaatcacacttaatttat 34235157  T
Q  130 tttag-aaaaacattttatatagtccctaattt 161  Q
    ||||| |||||||| ||||||| ||| ||||||    
T  34235158 tttagaaaaaacatgttatataatccgtaattt 34235190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 1051522 - 1051680
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    ||||||||||||  ||||||||||||    |||||||||||||||| ||||||  |||||||||||||| ||||||||||||||| ||||||||||||||    
T  1051522 ttaggaggggaatagaggggagggttaacatttcatttttaaattacggacaca-tgaaatgttttttaaaaagttaacatatta-catgataaacaatc 1051619  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    ||||||| |||||||||||||||||||||||||||||||||  ||||||||| | ||||||    
T  1051620 atataatgcttcaatcacacttaatttattttagaaaaacaggttatatagttcgtaattt 1051680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 36 - 148
Target Start/End: Original strand, 22163167 - 22163278
Alignment:
Q  36 tttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttattttaga 135  Q
    ||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22163167 tttttaaattacggacactatgaaatgttttttagaaagt-aacatattaacatgataaacgatcatataatacttcaatcacacttaatttattttaga 22163265  T
Q  136 aaaacattttata 148  Q
    |||||||| ||||    
T  22163266 aaaacattatata 22163278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 36 - 148
Target Start/End: Original strand, 22221875 - 22221986
Alignment:
Q  36 tttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttattttaga 135  Q
    ||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22221875 tttttaaattacggacactatgaaatgttttttagaaagt-aacatattaacatgataaacgatcatataatacttcaatcacacttaatttattttaga 22221973  T
Q  136 aaaacattttata 148  Q
    |||||||| ||||    
T  22221974 aaaacattatata 22221986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 25887415 - 25887261
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaa-gttaacatattaacatgataaacaat 99  Q
    |||||||||||||||||||||| ||||   |||||||||||||||| | | |   |||||||||||||  ||| ||||||||||||| ||||||||||||    
T  25887415 ttaggaggggaagggaggggagagtttacatttcatttttaaattacgaaaatcatgaaatgttttttttaaaagttaacatattaatatgataaacaat 25887316  T
Q  100 catataatacttcaatcacacttaatttattttagaaaaacattttatatagtcc 154  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  25887315 catataatactccaatcacacttaatttattttagaaaaacatgttatatagtcc 25887261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 18231808 - 18231693
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    ||||||||||||||||||||||| |||  |||||||||||||||||   ||||| |||||||||||||| |||||||||||||||||||||||||| |||    
T  18231808 ttaggaggggaagggaggggaggatttacttttcatttttaaattacaaacactatgaaatgttttttaaaaagttaacatattaacatgataaacgatc 18231709  T
Q  101 atataatacttcaatc 116  Q
    ||||||||||||||||    
T  18231708 atataatacttcaatc 18231693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 13770970 - 13771128
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    ||||||||||||||||||||||| |||  || | |||||||||||| ||||||| | |||| || |  | |||||||||||||||||||||||||||||     
T  13770970 ttaggaggggaagggaggggaggatttacttattatttttaaattacggacactataaaatattat--aaaaagttaacatattaacatgataaacaatg 13771067  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    |||||| |||  ||||||||||||||||||||| |||||||| ||||||||||| ||||||    
T  13771068 atataacactcgaatcacacttaatttattttaaaaaaacatgttatatagtccgtaattt 13771128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 42306552 - 42306404
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    ||||||||||||  ||||||| |||||  ||||||||||||||||| ||||||| |||||||||||||| ||||||| ||||||||| | |||||    |    
T  42306552 ttaggaggggaattgaggggatggtttaattttcatttttaaattacggacactatgaaatgttttttaaaaagttagcatattaacctcataaa----c 42306457  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacattttatatagtc 153  Q
    |||||||||| ||||||| |||||||||||||||||| |||| ||||||||||    
T  42306456 atataatactccaatcacgcttaatttattttagaaatacatgttatatagtc 42306404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 16 - 161
Target Start/End: Complemental strand, 43230442 - 43230298
Alignment:
Q  16 aggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaat 115  Q
    ||||||| ||||  |||| |||||||||||| ||||||| |||| | ||||||  |||||||||||||||||||||||||| ||| |||||| |||||||    
T  43230442 aggggagagtttactttttatttttaaattacggacact-tgaattttttttttaaaagttaacatattaacatgataaacgatcgtataattcttcaat 43230344  T
Q  116 cacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    | ||||||||||||||||||||||||| ||||||| ||| ||||||    
T  43230343 cgcacttaatttattttagaaaaacatgttatataatccgtaattt 43230298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 10315855 - 10315719
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    ||||||||||||||||| ||  | ||| ||||||||||||||| || ||||||| |||||||||||||| ||| |||||||||||||| ||||||| ||     
T  10315855 ttaggaggggaagggagagggtgatttatttttcatttttaaaatacggacactatgaaatgttttttaaaaatttaacatattaacaagataaacgatt 10315756  T
Q  101 atataatacttcaatcacacttaatttattttagaaa 137  Q
    |||||||||||||||||||||   |||||||||||||    
T  10315755 atataatacttcaatcacactgggtttattttagaaa 10315719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 34228410 - 34228491
Alignment:
Q  71 aaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacattttatatagt 152  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  34228410 aaagttaacatattaatatgataagcaatcatataatacttcaatcacacttaatttattttagaaaaacatgttatatagt 34228491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 45 - 154
Target Start/End: Original strand, 37417699 - 37417808
Alignment:
Q  45 tatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacattt 144  Q
    ||||| |||| ||||||||||| || |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||| ||| ||||||||| |    
T  37417699 tatggtcactatgaaatgttttctaaaaagttaacatattcacatgataaacgatcatataatacttcaatcacacttaacttaattttgaaaaacatgt 37417798  T
Q  145 tatatagtcc 154  Q
    ||||||||||    
T  37417799 tatatagtcc 37417808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 13425142 - 13425273
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    |||||||||||||| || ||| ||||| ||||| ||||||||||||  ||||||   |||| ||||||  ||||| ||||||||||||||||||||||||    
T  13425142 ttaggaggggaaggaagaggatggtttattttttatttttaaattacagacactacaaaatattttttcaaaagtcaacatattaacatgataaacaatc 13425241  T
Q  101 atataatacttcaatcacacttaatttatttt 132  Q
    |||| |||||||| ||||||||||||||||||    
T  13425242 atattatacttcattcacacttaatttatttt 13425273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 31 - 161
Target Start/End: Original strand, 40572287 - 40572416
Alignment:
Q  31 tttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttatt 130  Q
    |||||||||||||||| |||  || | |||| ||||||| |||||||||||||||||||||||||   ||||||||||||| |||||| |||||||||||    
T  40572287 tttcatttttaaattacggatgctataaaatatttttta-aaagttaacatattaacatgataaaaggtcatataatactttaatcacgcttaatttatt 40572385  T
Q  131 ttagaaaaacattttatatagtccctaattt 161  Q
    ||||| |||||| ||||||||||| ||||||    
T  40572386 ttagagaaacatattatatagtccgtaattt 40572416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 8 - 152
Target Start/End: Complemental strand, 26365983 - 26365839
Alignment:
Q  8 gggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataat 107  Q
    |||||| |||||||  ||||| ||||| ||||||||||||||| |||   |||| ||||||  ||| |||| ||| |||||||| |||||||||||||||    
T  26365983 gggaagagaggggatagtttgattttcgtttttaaattatggatactacaaaatattttttttaaaattaaaataataacatgagaaacaatcatataat 26365884  T
Q  108 acttcaatcacacttaatttattttagaaaaacattttatatagt 152  Q
    ||||||||||||| || ||||||||||||||| || |||||||||    
T  26365883 acttcaatcacacctagtttattttagaaaaatatgttatatagt 26365839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 45940678 - 45940830
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    |||| |||||||||||||| |  ||||  |||| ||||||| |||| ||||||| |||||||||||||| |||| ||  |||||||||| |||| | ||     
T  45940678 ttagaaggggaagggagggcaaagtttactttttatttttatattacggacactatgaaatgttttttacaaagatagtatattaacataataagcgata 45940777  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacattttatatagtc 153  Q
    ||||||||||||||| ||| ||||||||||||||||||| || ||||||||||    
T  45940778 atataatacttcaattacatttaatttattttagaaaaatatgttatatagtc 45940830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 161
Target Start/End: Complemental strand, 17853079 - 17852933
Alignment:
Q  14 ggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttca 113  Q
    ||||||||||| ||  ||||||||||||||||| |  |||| ||||| |||||| | |||| ||| |||  |||||||||||| |||||||||||| |||    
T  17853079 ggaggggagggcttacttttcatttttaaattacgagcactatgaaaagtttttaa-aaagataaaataacaacatgataaacgatcatataatacctca 17852981  T
Q  114 atcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    ||||||||||||||||||||||||||||| |||| || ||| ||||||    
T  17852980 atcacacttaatttattttagaaaaacatgttatttaatccgtaattt 17852933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 41008333 - 41008244
Alignment:
Q  71 aaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttatttt-agaaaaacattttatatagtccctaattt 161  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| | |||||||| ||||||||||| ||||||    
T  41008333 aaagttaacatattaacatgataaacaatcatata--acttcaatcacacttaatttattttaaaaaaaacatgttatatagtccgtaattt 41008244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 8 - 146
Target Start/End: Complemental strand, 37620989 - 37620851
Alignment:
Q  8 gggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataat 107  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||| | | ||||| ||||| |||| || |  ||| |||||||||||  || |||||||    
T  37620989 gggaagggaggggagggtttgcttttcttttttaaattatggacattataaaatgatttttggaaaattgaattatcaacatgataaaagattatataat 37620890  T
Q  108 acttcaatcacacttaatttattttagaaaaacatttta 146  Q
    |||||||  ||| ||||||||||||| |||| |||||||    
T  37620889 acttcaaaaacatttaatttattttaaaaaatcatttta 37620851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 33519270 - 33519122
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    |||||||||||||||||||||||| ||  ||||| | |||||||||  |||| | | ||||| |||||||||| || |  ||  |||||||||||  |||    
T  33519270 ttaggaggggaagggaggggagggattacttttcttctttaaattacagacattataaaatgatttttagaaaattgaattaacaacatgataaatgatc 33519171  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacattttatat 149  Q
    ||||||||||||||  ||||||||||||||| | |||||||||||||||    
T  33519170 atataatacttcaaaaacacttaatttatttcaaaaaaacattttatat 33519122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 89 - 161
Target Start/End: Original strand, 39855975 - 39856047
Alignment:
Q  89 tgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    |||||||  |||||||||||||| | |||||||||||||||||||||||||||| ||||||||||| ||||||    
T  39855975 tgataaatgatcatataatacttaagtcacacttaatttattttagaaaaacatgttatatagtccgtaattt 39856047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 64 - 137
Target Start/End: Original strand, 32872866 - 32872939
Alignment:
Q  64 tttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttattttagaaa 137  Q
    |||||| ||||||||||||||||||||||||||| |||||| ||  |||||| | |||||||||||||||||||    
T  32872866 tttttaaaaagttaacatattaacatgataaacactcatatcatctttcaattaaacttaatttattttagaaa 32872939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 80 - 161
Target Start/End: Original strand, 31571569 - 31571652
Alignment:
Q  80 atattaacatgataaacaatcatataatacttcaatcacacttaat-ttattttagaaaaa-cattttatatagtccctaattt 161  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| || ||||| ||||| ||| |||||| |||| ||||||    
T  31571569 atattaacatgataaacaattatataatacttcaatcacacttaatatttttttaaaaaaagcatgttatatggtccgtaattt 31571652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 85 - 139
Target Start/End: Original strand, 18063667 - 18063721
Alignment:
Q  85 aacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaa 139  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||| |||||    
T  18063667 aacatgataaatgatcatataatacttcaatcacacttaatttattttaaaaaaa 18063721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 35422186 - 35422041
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    ||||||||| ||  ||| |||||||||  ||||| |||| |||||| ||||| | | ||||  |||||||||| || |  ||  ||||| ||||| ||||    
T  35422186 ttaggagggaaatagagtggagggtttacttttctttttaaaattacggacattataaaataatttttagaaaattgaattaacaacataataaataatc 35422087  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacatttta 146  Q
    |||| |||||||||  ||||||||||||||||| ||||||||||||    
T  35422086 atatgatacttcaaaaacacttaatttattttaaaaaaacatttta 35422041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 36267575 - 36267720
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    |||||||||||||||||||||||| ||  ||||| ||||||||||| ||| | | | ||||| |||||||||| || |   |  || ||||||||  |||    
T  36267575 ttaggaggggaagggaggggagggcttagttttcttttttaaattacggatattataaaatgatttttagaaaattgaatcaacaatatgataaatgatc 36267674  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacatttta 146  Q
    ||||||||||||||  ||||||| | ||||||  ||||||||||||    
T  36267675 atataatacttcaaaaacacttactatattttgaaaaaacatttta 36267720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 29 - 150
Target Start/End: Complemental strand, 42087189 - 42087068
Alignment:
Q  29 tttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaattta 128  Q
    |||||||||||||||||| ||  | | |  || |||||||| ||||||| ||||||||| ||| |||| || |||||||| |||||| ||||||||||||    
T  42087189 tttttcatttttaaattacgggtattatacaaagttttttaaaaagttagcatattaacgtgacaaacgattatataataattcaattacacttaattta 42087090  T
Q  129 ttttagaaaaacattttatata 150  Q
    ||||| || || || |||||||    
T  42087089 ttttaaaataatatgttatata 42087068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 85 - 148
Target Start/End: Complemental strand, 7791857 - 7791794
Alignment:
Q  85 aacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacattttata 148  Q
    ||||||||||| ||||||||||||||| ||||||| ||||||||| ||| |||||| |||||||    
T  7791857 aacatgataaataatcatataatacttaaatcacatttaatttatgttaaaaaaacgttttata 7791794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 28074125 - 28074255
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    ||||||||||||||||||||||   |   ||||| ||||||||||| ||||| | | ||||| |||||||||| || |  ||  ||| |||||||  |||    
T  28074125 ttaggaggggaagggaggggagaactcacttttcttttttaaattacggacattataaaatgatttttagaaaattgaattaacaacctgataaatgatc 28074224  T
Q  101 atataatacttcaatcacacttaatttattt 131  Q
    ||||||||||||||  |||||||||||||||    
T  28074225 atataatacttcaaaaacacttaatttattt 28074255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 30592275 - 30592389
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    ||||||||| |||||| ||||||| ||  ||||| |||||||||||  |||||| | ||||| |||||| ||| || | ||| | | |||||||| ||||    
T  30592275 ttaggagggaaagggaagggagggcttacttttcttttttaaattacagacactataaaatgatttttaaaaaattgaaataatcatatgataaataatc 30592374  T
Q  101 atataatacttcaat 115  Q
    |||||||||||||||    
T  30592375 atataatacttcaat 30592389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 139
Target Start/End: Complemental strand, 48094102 - 48093977
Alignment:
Q  14 ggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttca 113  Q
    |||||||||| |||  ||||| ||||||||||| | || || | |||| ||||||| | | || | ||| ||| ||||||||  |||||||||||||| |    
T  48094102 ggaggggaggatttacttttcttttttaaattacgaacgctataaaatcttttttatagaattgaaataataaaatgataaatgatcatataatacttta 48094003  T
Q  114 atcacacttaatttattttagaaaaa 139  Q
    | |||||||||||||||||| |||||    
T  48094002 accacacttaatttattttaaaaaaa 48093977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 148
Target Start/End: Complemental strand, 48152127 - 48152055
Alignment:
Q  75 ttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacattttata 148  Q
    |||| ||| |||||| |||||  ||||| |||||||||||||||||| |||||||||||||||||||| |||||    
T  48152127 ttaaaatactaacataataaatgatcat-taatacttcaatcacactaaatttattttagaaaaacatgttata 48152055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 48 - 152
Target Start/End: Complemental strand, 38378215 - 38378116
Alignment:
Q  48 ggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacattttat 147  Q
    ||||||| | |||||||||||| ||||||||||     |||| |||||| |||||||||||| ||||| ||| || |||||||||  |||||||| ||||    
T  38378215 ggacactttaaaatgttttttaaaaagttaaca-----acataataaacgatcatataatacctcaattacaattgatttatttttaaaaaacatgttat 38378121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 120
Target Start/End: Original strand, 47229909 - 47229973
Alignment:
Q  56 tgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacac 120  Q
    |||||| ||| ||| ||||  |||||||||||||||||||||||||| ||||| |||||||||||    
T  47229909 tgaaatatttcttaaaaagcgaacatattaacatgataaacaatcatgtaataattcaatcacac 47229973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 127
Target Start/End: Original strand, 18127347 - 18127390
Alignment:
Q  84 taacatgataaacaatcatataatacttcaatcacacttaattt 127  Q
    ||||||||||||  ||||||||||||||||||||||||||||||    
T  18127347 taacatgataaatgatcatataatacttcaatcacacttaattt 18127390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 20393740 - 20393693
Alignment:
Q  84 taacatgataaacaatcatataatacttcaatcacacttaatttattt 131  Q
    |||||| |||||  ||||||||||||||||||||||||||||||||||    
T  20393740 taacattataaatgatcatataatacttcaatcacacttaatttattt 20393693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 150
Target Start/End: Original strand, 30891045 - 30891165
Alignment:
Q  30 ttttcatttttaaattatggacactgtgaaatgttt--tttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaattt 127  Q
    ||||||||||||||||| ||||||| | |||| | |  |||  ||| |||| ||||||| || |||||| || ||||||||||||||||||| |||||||    
T  30891045 ttttcatttttaaattacggacactataaaatatatattttttaaaattaa-atattaatataataaacgataatataatacttcaatcacatttaattt 30891143  T
Q  128 attttagaaaaacattttatata 150  Q
    | |||| |||||||| |||||||    
T  30891144 a-tttaaaaaaacatattatata 30891165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 85 - 139
Target Start/End: Original strand, 23116366 - 23116420
Alignment:
Q  85 aacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaa 139  Q
    |||||||||||  || ||||||||||||||||||||||||||| ||||| |||||    
T  23116366 aacatgataaatgattatataatacttcaatcacacttaattttttttaaaaaaa 23116420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 39856087 - 39856037
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggac 51  Q
    |||||||||||||||||||||||||||  ||||| ||||||||||| ||||    
T  39856087 ttaggaggggaagggaggggagggtttacttttcttttttaaattacggac 39856037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 153
Target Start/End: Original strand, 23029435 - 23029508
Alignment:
Q  74 gttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacattttatatagtc 153  Q
    |||||||||||||||||||||||| | |||||||| ||||||  |      |||||||||||||||||| ||||||||||    
T  23029435 gttaacatattaacatgataaacagttatataatatttcaatacc------tttattttagaaaaacatgttatatagtc 23029508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 40282219 - 40282263
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaatt 45  Q
    ||||||||||||||||| |||||||||| ||||| ||||||||||    
T  40282219 ttaggaggggaagggagaggagggtttgattttcttttttaaatt 40282263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 85 - 132
Target Start/End: Original strand, 19261945 - 19261992
Alignment:
Q  85 aacatgataaacaatcatataatacttcaatcacacttaatttatttt 132  Q
    |||||||||||  |||||||| ||||||||||||| ||||||||||||    
T  19261945 aacatgataaatgatcatatagtacttcaatcacaattaatttatttt 19261992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 37925863 - 37925930
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgtttttt 68  Q
    ||||||||||||||||||||||||||   ||||  ||||||||||| | ||| ||| |||||||||||    
T  37925863 ttaggaggggaagggaggggagggttcacttttattttttaaattacgaacaatgtaaaatgtttttt 37925930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 47390877 - 47390924
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatg 48  Q
    ||||||||||||||||| |||||||||  ||||| |||||||||||||    
T  47390877 ttaggaggggaagggagtggagggtttacttttcttttttaaattatg 47390924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 48013525 - 48013591
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgtttttt 68  Q
    |||||||||||||||||||||| ||| | |||| |||||||||||| | ||| ||| |||||||||||    
T  48013525 ttaggaggggaagggaggggagcgttcgctttt-atttttaaattacgaacaatgtaaaatgtttttt 48013591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 146
Target Start/End: Complemental strand, 3143615 - 3143557
Alignment:
Q  88 atgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacatttta 146  Q
    ||||||||  |||||||||||||||||  | ||||||||||||||| ||||| ||||||    
T  3143615 atgataaatgatcatataatacttcaaaaaaacttaatttattttataaaaatatttta 3143557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 41008208 - 41008254
Alignment:
Q  5 gaggggaagggaggggagggtttgtttttcatttttaaattatggac 51  Q
    ||||||||||||||||||  |||||||||| ||||||||||| ||||    
T  41008208 gaggggaagggaggggagaatttgtttttcttttttaaattacggac 41008254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 1051720 - 1051675
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaatta 46  Q
    |||||||||||||||||| |||| ||| |||||| |||||||||||    
T  1051720 ttaggaggggaagggaggagaggatttatttttcttttttaaatta 1051675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 175 - 208
Target Start/End: Original strand, 1051693 - 1051726
Alignment:
Q  175 taaaccctctcctcccttcccctcctaaaccctc 208  Q
    |||| |||||||||||||||||||||||||||||    
T  1051693 taaatcctctcctcccttcccctcctaaaccctc 1051726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 175 - 208
Target Start/End: Complemental strand, 4833580 - 4833547
Alignment:
Q  175 taaaccctctcctcccttcccctcctaaaccctc 208  Q
    ||||||||| ||||||||||||||||||||||||    
T  4833580 taaaccctcccctcccttcccctcctaaaccctc 4833547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 100 - 133
Target Start/End: Original strand, 33519416 - 33519449
Alignment:
Q  100 catataatacttcaatcacacttaatttatttta 133  Q
    ||||||||||||||||||||||||||| ||||||    
T  33519416 catataatacttcaatcacacttaattaatttta 33519449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 175 - 208
Target Start/End: Original strand, 39856060 - 39856093
Alignment:
Q  175 taaaccctctcctcccttcccctcctaaaccctc 208  Q
    ||||||||| ||||||||||||||||||||||||    
T  39856060 taaaccctcccctcccttcccctcctaaaccctc 39856093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 149
Target Start/End: Complemental strand, 21857485 - 21857421
Alignment:
Q  85 aacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacattttatat 149  Q
    |||||||||||  |||||| |||| |||||  ||||||||||||||||| ||||  |||||||||    
T  21857485 aacatgataaatgatcatacaatatttcaaaaacacttaatttattttaaaaaaggattttatat 21857421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 33655330 - 33655282
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatgg 49  Q
    ||||||||||||| |||| ||||||||  ||||| ||||||||||||||    
T  33655330 ttaggaggggaagagaggcgagggtttacttttcttttttaaattatgg 33655282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 102; Significance: 8e-51; HSPs: 62)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 23748317 - 23748164
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    ||||||||||||||||||||||||||   |||||||||||||| || ||||||| |||||||| ||||| |||||||||||||||||||||||||| ||     
T  23748317 ttaggaggggaagggaggggagggttcacttttcatttttaaactacggacactatgaaatgtcttttaaaaagttaacatattaacatgataaacgata 23748218  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacattttatatagtcc 154  Q
    |||||||||||||||||||||| ||||||||| ||||||||| |||||||||||    
T  23748217 atataatacttcaatcacacttgatttatttttgaaaaacatgttatatagtcc 23748164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 17 - 161
Target Start/End: Original strand, 15224732 - 15224876
Alignment:
Q  17 ggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatc 116  Q
    |||||| ||||  ||||||||||||||||| ||||||| |||||||||||||| |||| ||||||||||||||||||||  |||||||||||||||||||    
T  15224732 ggggagtgtttacttttcatttttaaattacggacactatgaaatgttttttaaaaagctaacatattaacatgataaatgatcatataatacttcaatc 15224831  T
Q  117 acacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    |||||||||||||| ||||||||||| |||||||| || ||||||    
T  15224832 acacttaatttattctagaaaaacatgttatatagcccgtaattt 15224876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 36347563 - 36347723
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    |||||||||||||||| | ||| |||   |||||||||||| |||| ||| ||| ||| || ||||||| | |||||||||||||||||||||||||||     
T  36347563 ttaggaggggaagggaagagagagttcacttttcatttttatattacggatactatgacatattttttaaatagttaacatattaacatgataaacaatt 36347662  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  36347663 atataatacttcaatcacacttaatttattttagaaaaacatgttatatagtccgtaattt 36347723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 14 - 161
Target Start/End: Original strand, 39732764 - 39732910
Alignment:
Q  14 ggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttca 113  Q
    ||||||||||||||  ||||||||||||||||| | ||| | ||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||    
T  39732764 ggaggggagggtttacttttcatttttaaattacgaacattatgaaatgttttataaaaagttaacatattaacatgataaacgatcatataatacttca 39732863  T
Q  114 atcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    |||| ||||||||||||||||||||||| | |||||||||| ||||||    
T  39732864 atcatacttaatttattttagaaaaaca-tgtatatagtccgtaattt 39732910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 30 - 150
Target Start/End: Complemental strand, 16565970 - 16565850
Alignment:
Q  30 ttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttat 129  Q
    |||| |||||||||||| ||| ||| ||||| |||||||| ||||||||||||| || ||||||||| ||||||||||||||||||||||||||||||||    
T  16565970 tttttatttttaaattacggatactatgaaacgttttttaaaaagttaacatataaatatgataaacgatcatataatacttcaatcacacttaatttat 16565871  T
Q  130 tttagaaaaacattttatata 150  Q
    ||||||||||||| |||||||    
T  16565870 tttagaaaaacatgttatata 16565850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 5 - 161
Target Start/End: Complemental strand, 40022591 - 40022432
Alignment:
Q  5 gaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgtttttt-agaaagttaacatatta--acatgataaacaatca 101  Q
    |||| ||||||||||||||||||   ||||||||||||||||  |||||| ||||||||||||| | ||||| |||||||||  | ||| ||||||||||    
T  40022591 gaggagaagggaggggagggtttacatttcatttttaaattacagacactatgaaatgtttttttaaaaagtaaacatattataatatgttaaacaatca 40022492  T
Q  102 tataatacttcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||||| | ||||||    
T  40022491 tataatacttcaatcacacttaatttattttacaaaaacatgttatatagttcataattt 40022432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 2241640 - 2241472
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttag--------aaagttaacatattaacatgat 92  Q
    ||||| |||||| | ||||||| |||| ||||||||||||||||||||||| || || ||||||||||          ||| ||||||||||||||||||    
T  2241640 ttaggtggggaaagaaggggagagtttatttttcatttttaaattatggacgctatggaatgtttttttttttttttaaaatttaacatattaacatgat 2241541  T
Q  93 aaacaatcatataatacttcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||| ||||||    
T  2241540 aaacaatcatataatacttcaattacacttaatttattttagaaaaacgtattatatagtccgtaattt 2241472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 41 - 138
Target Start/End: Complemental strand, 17379994 - 17379897
Alignment:
Q  41 aaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaa 138  Q
    |||||| ||||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  17379994 aaattacggacactatgaaatgttttttaaaaagttagcatattaacatgataaacaatcatataatactccaatcacacttaatttattttagaaaa 17379897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 3 - 150
Target Start/End: Original strand, 36566874 - 36567022
Alignment:
Q  3 aggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttt-tagaaagttaacatattaacatgataaacaatca 101  Q
    |||||||||||||| | |||| |||  ||||||||||||||||| ||||| | |||||  ||||| || |||||||||||||||||||||||||  ||||    
T  36566874 aggaggggaagggatgagaggatttacttttcatttttaaattacggacattatgaaagttttttataaaaagttaacatattaacatgataaatgatca 36566973  T
Q  102 tataatacttcaatcacacttaatttattttagaaaaacattttatata 150  Q
    |||||||||||||||||| |||||||||| ||||||||||| |||||||    
T  36566974 tataatacttcaatcacaattaatttattatagaaaaacatgttatata 36567022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 8426901 - 8427041
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    |||||||||||||||| ||||||||||  |||| |||||||||||| ||||||| |||||||||||||| ||||        |||||||||||||  |||    
T  8426901 ttaggaggggaagggaagggagggtttacttttaatttttaaattaaggacactatgaaatgttttttaaaaag--------ttaacatgataaatgatc 8426992  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacattttatat 149  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  8426993 atataatacttcaatcgcacttaatttattttagaaaaacatgttatat 8427041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 19566860 - 19567003
Alignment:
Q  19 ggagggtttgtttttcatttttaaattatggacactgtgaaatgtttttt-agaaagttaacatattaacatgataaacaatcatataatacttcaatca 117  Q
    |||||||||  || ||| ||||||||||  |||||| ||||||||||||| | ||||||| |||||||| |||||||||  || ||||||||||||||||    
T  19566860 ggagggtttacttctcagttttaaattacagacactatgaaatgtttttttaaaaagttagcatattaaaatgataaacggtcgtataatacttcaatca 19566959  T
Q  118 cacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||    
T  19566960 cacttaatttattttagaaaaacatgttatatagtccgtaattt 19567003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 36046226 - 36046384
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    ||||||||||||  |||||||| |||| |||||||||||||||||| |||||||   |||||||||||| |||||||||||||||||||| ||||  |||    
T  36046226 ttaggaggggaaatgaggggagagtttatttttcatttttaaattacggacactagaaaatgttttttaaaaagttaacatattaacatgttaaatgatc 36046325  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    | |||||||||||||  |||| ||||||||||| |||| ||| |||||| |||| ||||||    
T  36046326 acataatacttcaat--cactcaatttattttataaaagcatgttatatcgtccgtaattt 36046384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 14 - 161
Target Start/End: Complemental strand, 39821878 - 39821731
Alignment:
Q  14 ggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttca 113  Q
    ||||||||||||||  ||||| ||||||||||| ||||||| ||||||  | |||| | |||||||||||||||||||||||  ||| |||||||||| |    
T  39821878 ggaggggagggtttagttttcttttttaaattacggacactatgaaataatatttaaagagttaacatattaacatgataaatgatcttataatacttaa 39821779  T
Q  114 atcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    ||| ||||||||||||||||||||||||| ||||| | ||| ||||||    
T  39821778 atcgcacttaatttattttagaaaaacatgttatagaatccataattt 39821731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 9 - 139
Target Start/End: Complemental strand, 12752029 - 12751899
Alignment:
Q  9 ggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataata 108  Q
    ||||| |||||||||||||| ||||| |||| |||||||||||||| |||||| ||||||  ||| |||| ||| ||| || |||||| |||||||||||    
T  12752029 ggaagagaggggagggtttgcttttcgttttaaaattatggacactatgaaatatttttttaaaaattaatataataatataataaacgatcatataata 12751930  T
Q  109 cttcaatcacacttaatttattttagaaaaa 139  Q
    |||||||||||||||| ||||||||||||||    
T  12751929 cttcaatcacacttaaattattttagaaaaa 12751899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 36 - 153
Target Start/End: Original strand, 28262500 - 28262617
Alignment:
Q  36 tttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttattttaga 135  Q
    ||||||||||||| ||||| |||||| ||||||| |||||||| ||| ||||||||||||| ||||| ||||| ||||||||||  ||||||||||||||    
T  28262500 tttttaaattatgaacactatgaaatattttttaaaaagttaatataataacatgataaacgatcatgtaatatttcaatcacatgtaatttattttaga 28262599  T
Q  136 aaaacattttatatagtc 153  Q
    ||||||| ||||||||||    
T  28262600 aaaacatgttatatagtc 28262617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 30 - 127
Target Start/End: Complemental strand, 34209657 - 34209560
Alignment:
Q  30 ttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaattt 127  Q
    |||||||||||||||||   ||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  34209657 ttttcatttttaaattacaaacactatgaaatattttttaaaaagttaacatattaacatgataaacaatcatataacacttcaatcacacttaattt 34209560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 21 - 152
Target Start/End: Complemental strand, 9427188 - 9427056
Alignment:
Q  21 agggtttgtttttcatttttaaattatggacactgtgaaatgttttttag-aaagttaacatattaacatgataaacaatcatataatacttcaatcaca 119  Q
    |||||||| ||||||||||||||||| ||||||| | |||||||||||   ||||||| ||||||| |||||||||||| |||||||||||||||||||     
T  9427188 agggtttgattttcatttttaaattacggacactataaaatgtttttttttaaagttagcatattagcatgataaacaaacatataatacttcaatcacg 9427089  T
Q  120 cttaatttattttagaaaaacattttatatagt 152  Q
    | ||||||| ||| ||||||||| |||||||||    
T  9427088 cataatttagttttgaaaaacatgttatatagt 9427056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 58 - 161
Target Start/End: Complemental strand, 12541931 - 12541827
Alignment:
Q  58 aaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttattttaga-aaaacattttatatagtccct 156  Q
    |||||||||||| |||||||||| ||||||||||||||| |||||||| |||||||||| |||||||||||||||||| |||| |||||||||||||| |    
T  12541931 aaatgttttttaaaaagttaacacattaacatgataaacgatcatatagtacttcaatcgcacttaatttattttagaaaaaatattttatatagtccgt 12541832  T
Q  157 aattt 161  Q
    |||||    
T  12541831 aattt 12541827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 5 - 147
Target Start/End: Original strand, 31795795 - 31795937
Alignment:
Q  5 gaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatat 104  Q
    |||| ||||||||||||||  ||  ||||| ||||||||||| ||||||| ||||| |||||||  |||  ||| |||  |||||||||||| |||||||    
T  31795795 gaggtgaagggaggggaggacttacttttcgtttttaaattacggacactatgaaaagtttttttaaaaaataaaataacaacatgataaacgatcatat 31795894  T
Q  105 aatacttcaatcacacttaatttattttagaaaaacattttat 147  Q
    ||||||||||||||||||||||||||||| |||||||| ||||    
T  31795895 aatacttcaatcacacttaatttattttaaaaaaacatgttat 31795937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 9631782 - 9631652
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    ||||||||| |||||||  |||||||   ||||| ||||||||||| ||||||  ||||||||  |||| |||||||||||||||||||||||||| ||     
T  9631782 ttaggagggaaagggagaagagggttaacttttcgtttttaaattacggacaccatgaaatgtcctttaaaaagttaacatattaacatgataaacgata 9631683  T
Q  101 atataatacttcaatcacacttaatttattt 131  Q
    ||||||||||||| |||||||| ||||||||    
T  9631682 atataatacttcattcacacttgatttattt 9631652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 42316815 - 42316909
Alignment:
Q  30 ttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaa 124  Q
    ||||||||||||||||    ||||| |||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  42316815 ttttcatttttaaattgcaaacactatgaaatgttttttaaaaagttaacgtattaacatgataaacgatcatataatacttcaatcacacttaa 42316909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 62 - 139
Target Start/End: Original strand, 37739974 - 37740051
Alignment:
Q  62 gttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaa 139  Q
    |||||| | |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  37739974 gtttttcaaaaagttaagatattaacatgataaacgatcatataatacttcaatcacacttaatttattttagaaaaa 37740051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 63 - 150
Target Start/End: Original strand, 29525815 - 29525904
Alignment:
Q  63 ttttttagaaagttaacatattaacatgataaaca--atcatataatacttcaatcacacttaatttattttagaaaaacattttatata 150  Q
    |||||| |||||||||||||||||||||||||| |  || ||||||||||||||||||| ||||||||||||| |||||||| |||||||    
T  29525815 ttttttggaaagttaacatattaacatgataaaaagtattatataatacttcaatcacatttaatttattttaaaaaaacatattatata 29525904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 32503364 - 32503232
Alignment:
Q  18 gggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatca 117  Q
    ||||||| || |||||| |||||||| ||  || | ||| ||||||||| || |||||||| |||| || |||||||| |||||||||||| || |||||    
T  32503364 gggagggattatttttcctttttaaactacagataatgtaaaatgttttgtaaaaagttaatatataaagatgataaataatcatataatattttaatca 32503265  T
Q  118 cacttaatttattttagaaaaacattttatata 150  Q
     ||||||||||||||||||||| || |||||||    
T  32503264 tacttaatttattttagaaaaatatgttatata 32503232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 84 - 148
Target Start/End: Complemental strand, 18811467 - 18811404
Alignment:
Q  84 taacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacattttata 148  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||    
T  18811467 taacatgataaacaatcatataatatttcaatcacacttaatttatttta-aaaaacactttata 18811404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 98 - 161
Target Start/End: Complemental strand, 41778898 - 41778835
Alignment:
Q  98 atcatataatacttcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||  |||| ||||||    
T  41778898 atcatataatacttcaatcacacttaatttattttaaaaaaacattttatactgtccataattt 41778835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 24 - 108
Target Start/End: Complemental strand, 27926752 - 27926668
Alignment:
Q  24 gtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataata 108  Q
    |||| |||||||||||||||||| ||| ||| | |||| ||  ||| |||||||||||||||||||||||||| |||||||||||    
T  27926752 gtttatttttcatttttaaattacggatactattaaattttggttaaaaagttaacatattaacatgataaacgatcatataata 27926668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 85 - 152
Target Start/End: Original strand, 3094459 - 3094526
Alignment:
Q  85 aacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacattttatatagt 152  Q
    ||||||||||| ||||||||||||||||||  ||||  |||||||||||||||||||||||| |||||    
T  3094459 aacatgataaataatcatataatacttcaaaaacacgaaatttattttagaaaaacattttacatagt 3094526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 150
Target Start/End: Original strand, 39354231 - 39354345
Alignment:
Q  36 tttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttattttaga 135  Q
    ||||||||||| | ||| | |||||| ||||| | ||| |||| ||| |||||| |||| | ||||| |||||||||||||||||| | |||||||||||    
T  39354231 tttttaaattacgcacattatgaaatatttttaaaaaaattaaaataataacataataatcgatcatgtaatacttcaatcacactaactttattttaga 39354330  T
Q  136 aaaacattttatata 150  Q
     |||||| |||||||    
T  39354331 taaacatgttatata 39354345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 88 - 149
Target Start/End: Complemental strand, 887051 - 886990
Alignment:
Q  88 atgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacattttatat 149  Q
    ||||||||  ||||||||||||||||||||||| |||||||||||| |||| ||||||||||    
T  887051 atgataaatgatcatataatacttcaatcacacataatttattttaaaaaagcattttatat 886990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 45257529 - 45257384
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    |||||| ||||||||||| || |||||  ||||| ||||||||||| ||| | | | ||||| ||||| |||| || |  ||  || ||||||||  |||    
T  45257529 ttaggatgggaagggaggagatggtttacttttcttttttaaattacggatattataaaatgattttttgaaaattgaattaacaatatgataaatgatc 45257430  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacatttta 146  Q
    ||||||||||||||  |||||||||||||||||  |||||||||||    
T  45257429 atataatacttcaaaaacacttaatttattttaagaaaacatttta 45257384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 1583286 - 1583222
Alignment:
Q  14 ggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaa 78  Q
    |||||||||||||   ||||||||||||||||| ||||||| |||||||||||||| ||||||||    
T  1583286 ggaggggagggttcacttttcatttttaaattacggacactatgaaatgttttttaaaaagttaa 1583222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 74 - 142
Target Start/End: Original strand, 6721717 - 6721785
Alignment:
Q  74 gttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacat 142  Q
    ||||| || |||||||||||||  || |||||||| ||||||||||||| |||||||||||||||||||    
T  6721717 gttaatatcttaacatgataaatgataatataatatttcaatcacacttgatttattttagaaaaacat 6721785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 154
Target Start/End: Complemental strand, 35736300 - 35736244
Alignment:
Q  98 atcatataatacttcaatcacacttaatttattttagaaaaacattttatatagtcc 154  Q
    |||||||||||||||| |||||||| ||||||||||||||||||| |||| ||||||    
T  35736300 atcatataatacttcagtcacacttcatttattttagaaaaacatgttatctagtcc 35736244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 93 - 160
Target Start/End: Complemental strand, 7681378 - 7681311
Alignment:
Q  93 aaacaatcatataatacttcaatcacacttaatttattttagaaaaacattttatatagtccctaatt 160  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||  | ||||||| ||| |||||    
T  7681378 aaacgatcatataatacttcaatcacacttaatttattttacaaaaaactattatataatccgtaatt 7681311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 89 - 152
Target Start/End: Complemental strand, 41841816 - 41841753
Alignment:
Q  89 tgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacattttatatagt 152  Q
    ||||||| |||||||||||||| ||||||| ||||||||||||||| |||| || |||||||||    
T  41841816 tgataaaaaatcatataatactccaatcacccttaatttattttaggaaaatatgttatatagt 41841753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 17380063 - 17380010
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacact 54  Q
    ||||||||||||| ||||||| |||||| ||||||||||||||||| |||||||    
T  17380063 ttaggaggggaagtgaggggatggtttgattttcatttttaaattacggacact 17380010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 133
Target Start/End: Complemental strand, 20545848 - 20545799
Alignment:
Q  84 taacatgataaacaatcatataatacttcaatcacacttaatttatttta 133  Q
    |||||||| ||| ||||||||||||||||||||||| |||||||||||||    
T  20545848 taacatgagaaataatcatataatacttcaatcacatttaatttatttta 20545799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 146
Target Start/End: Complemental strand, 45098307 - 45098246
Alignment:
Q  85 aacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacatttta 146  Q
    |||||||||||  |||||||||||||||||  ||||||||||||||||| ||| ||||||||    
T  45098307 aacatgataaatgatcatataatacttcaaaaacacttaatttattttaaaaatacatttta 45098246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 887332 - 887210
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    |||||||||||||||||||||| | ||  ||||| ||||||||||| |||  || | |||||||||| | ||  |||| |    |||||||||||| |||    
T  887332 ttaggaggggaagggaggggagcgcttacttttcttttttaaattacggatgctataaaatgtttttaaaaa--ttaaaa----aacatgataaacgatc 887239  T
Q  101 atataatacttcaatcacacttaatttat 129  Q
    |||||||||||||||||||| | ||||||    
T  887238 atataatacttcaatcacacatgatttat 887210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 22356226 - 22356175
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggaca 52  Q
    ||||||||||||||||||||||||||  |||||| ||||||||||| |||||    
T  22356226 ttaggaggggaagggaggggagggttcatttttcttttttaaattacggaca 22356175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 35736409 - 35736297
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    |||||||| ||||||||||||||| |   ||||| ||||||||||  ||||||| ||||| |||||||| ||    || | | ||||||||||||| |||    
T  35736409 ttaggaggtgaagggaggggagggctcacttttcgtttttaaatttcggacactatgaaaagttttttaaaa----aataaaataacatgataaacgatc 35736314  T
Q  101 atataatacttcaatca 117  Q
    |||||||||||| ||||    
T  35736313 atataatacttcgatca 35736297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 36 - 138
Target Start/End: Complemental strand, 33265793 - 33265691
Alignment:
Q  36 tttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttattttaga 135  Q
    ||||||||||||| ||| ||| ||||| ||||| |||| || |  ||  || ||||||||  |||||||||||||||||  ||||||||||||||||| |    
T  33265793 tttttaaattatgaacaatgtaaaatgattttttgaaaattgaattaacaatatgataaatgatcatataatacttcaaaaacacttaatttattttaaa 33265694  T
Q  136 aaa 138  Q
    |||    
T  33265693 aaa 33265691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 42813842 - 42813732
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    ||||||||||||| ||||||| || || |||||| ||||||||||| | ||| | | ||||| |||||||||| || |  ||  ||| ||||||| ||||    
T  42813842 ttaggaggggaagagaggggatggcttatttttcttttttaaattacgaacattataaaatgatttttagaaaattgaattaacaacctgataaataatc 42813743  T
Q  101 atataatactt 111  Q
    |||||||||||    
T  42813742 atataatactt 42813732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 146
Target Start/End: Original strand, 2381109 - 2381154
Alignment:
Q  101 atataatacttcaatcacacttaatttattttagaaaaacatttta 146  Q
    ||||||||||||||  ||||||||||||||||| ||||||||||||    
T  2381109 atataatacttcaaaaacacttaatttattttaaaaaaacatttta 2381154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 9427007 - 9427052
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaatta 46  Q
    |||||||||||||||||| ||||||||| ||||| |||||||||||    
T  9427007 ttaggaggggaagggaggagagggtttgattttcttttttaaatta 9427052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 146
Target Start/End: Complemental strand, 31061497 - 31061436
Alignment:
Q  85 aacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacatttta 146  Q
    |||||||||||  ||||||||||| |||||  ||||||||||||||||| ||| ||||||||    
T  31061497 aacatgataaatgatcatataatatttcaaaaacacttaatttattttaaaaacacatttta 31061436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 146
Target Start/End: Original strand, 21662328 - 21662375
Alignment:
Q  98 atcatataatacttcaatcacacttaatttattttagaaaaacatttta 146  Q
    |||||||||||||||||||| |||||||| |||||| ||||||||||||    
T  21662328 atcatataatacttcaatcaaacttaattgatttta-aaaaacatttta 21662375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 21745248 - 21745295
Alignment:
Q  97 aatcatataatacttcaatcacacttaatttattttagaaaaacattt 144  Q
    |||||||||||| ||||| ||||||||||| |||||||||||| ||||    
T  21745248 aatcatataatagttcaaccacacttaattgattttagaaaaatattt 21745295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 31928149 - 31928196
Alignment:
Q  84 taacatgataaacaatcatataatacttcaatcacacttaatttattt 131  Q
    ||||||||||||  |||||||||||||||||  |||||||||||||||    
T  31928149 taacatgataaatgatcatataatacttcaaaaacacttaatttattt 31928196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 84 - 139
Target Start/End: Complemental strand, 35325408 - 35325353
Alignment:
Q  84 taacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaa 139  Q
    ||||||||||||  |||||||||||||||||  | ||||||||||||||| |||||    
T  35325408 taacatgataaatgatcatataatacttcaaaaatacttaatttattttaaaaaaa 35325353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 145
Target Start/End: Original strand, 42537859 - 42537912
Alignment:
Q  91 ataaacaatcatataatacttcaatcacacttaatttattttagaaaaacatttt 145  Q
    ||||| |||||||||||| ||||||||||||||||| ||| || |||||||||||    
T  42537859 ataaataatcatataatatttcaatcacacttaattgattata-aaaaacatttt 42537912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 15224916 - 15224871
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaatta 46  Q
    ||||||||||||||||||||| |||||  ||||| |||||||||||    
T  15224916 ttaggaggggaagggaggggatggtttacttttcttttttaaatta 15224871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 146
Target Start/End: Original strand, 17333933 - 17333978
Alignment:
Q  101 atataatacttcaatcacacttaatttattttagaaaaacatttta 146  Q
    ||||||||||||||  ||||||||||||||||| ||| ||||||||    
T  17333933 atataatacttcaaaaacacttaatttattttaaaaagacatttta 17333978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 17379868 - 17379901
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttc 34  Q
    |||||||||||||||||||||||||||| |||||    
T  17379868 ttaggaggggaagggaggggagggtttgattttc 17379901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 146
Target Start/End: Complemental strand, 22356087 - 22356042
Alignment:
Q  101 atataatacttcaatcacacttaatttattttagaaaaacatttta 146  Q
    ||||||||||||||  ||||||||| ||||||| ||||||||||||    
T  22356087 atataatacttcaaaaacacttaatctattttaaaaaaacatttta 22356042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 39821695 - 39821740
Alignment:
Q  5 gaggggaagggaggggagggtttgtttttcatttttaaattatgga 50  Q
    ||||| || ||||||||||||||  |||||||||||||||||||||    
T  39821695 gagggaaatggaggggagggtttacttttcatttttaaattatgga 39821740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 41841704 - 41841749
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaatta 46  Q
    ||||||||| |||||| ||||||||||| ||||| |||||||||||    
T  41841704 ttaggagggaaagggatgggagggtttgattttcttttttaaatta 41841749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 204
Target Start/End: Complemental strand, 9427033 - 9427005
Alignment:
Q  176 aaaccctctcctcccttcccctcctaaac 204  Q
    |||||||||||||||||||||||||||||    
T  9427033 aaaccctctcctcccttcccctcctaaac 9427005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 161
Target Start/End: Original strand, 9591973 - 9592017
Alignment:
Q  117 acacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    ||||||||| |||||||||||||||| ||||||||| | ||||||    
T  9591973 acacttaatatattttagaaaaacatgttatatagtgcgtaattt 9592017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 132
Target Start/End: Original strand, 15085757 - 15085853
Alignment:
Q  36 tttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttatttt 132  Q
    |||| |||||| ||||| | | ||||| |||||||||| || |  ||  ||| |||||||  |||||||||||||||||  ||||||||||||||||    
T  15085757 ttttaaaattacggacattataaaatgatttttagaaaattgaattaacaacttgataaatgatcatataatacttcaaaaacacttaatttatttt 15085853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 17379894 - 17379862
Alignment:
Q  176 aaaccctctcctcccttcccctcctaaaccctc 208  Q
    |||||||| ||||||||||||||||||||||||    
T  17379894 aaaccctcccctcccttcccctcctaaaccctc 17379862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 98; Significance: 2e-48; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 9719053 - 9719205
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||| ||||||| || ||||||||||| ||||||||||||||||  ||||||||||||    
T  9719053 ttaggaggggaagggaggggaggatttatttttcatttttaaattacggacactatggaatgttttttaaaaagttaacatattaatttgataaacaatc 9719152  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacattttatatagtcc 154  Q
    ||||||||||||||||||||| |||||| |||| |||| ||| |||||||||||    
T  9719153 atataatacttcaatcacactaaatttaattta-aaaagcatgttatatagtcc 9719205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 9721160 - 9721312
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||||||| || ||||||||||| ||||||||||||||||  ||||||||||||    
T  9721160 ttaggaggggaagggaggggagggtttatttttcatttttaaattacggacactatggaatgttttttaaaaagttaacatattaatttgataaacaatc 9721259  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacattttatatagtcc 154  Q
    ||||||||||||||||||||| | |||| |||| |||||||| |||||| ||||    
T  9721260 atataatacttcaatcacactaactttaattta-aaaaacatgttatatggtcc 9721312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 30487328 - 30487480
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    ||||||||||||||||||||||||||   |||||||| |||||||| ||||| | |||||||| ||||| ||||| |||||||||||||||||||||||     
T  30487328 ttaggaggggaagggaggggagggttcacttttcattgttaaatta-ggacagtatgaaatgtcttttaaaaagtcaacatattaacatgataaacaata 30487426  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacattttatatagtcc 154  Q
    |||||||||||||||||||||| |||||||||| |||||||| |||||||||||    
T  30487427 atataatacttcaatcacacttgatttattttataaaaacatgttatatagtcc 30487480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 161
Target Start/End: Complemental strand, 33236164 - 33236013
Alignment:
Q  9 ggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataata 108  Q
    |||| ||||||||| | ||  ||||||||||||||||| ||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||     
T  33236164 ggaaaggaggggagagattacttttcatttttaaattacggacactatgaaat-ttttttaaaaagttaacatattaacatgataaacaatcatataatt 33236066  T
Q  109 cttcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    |||||||||  ||||||||||||||||||||||| ||||||||||| ||||||    
T  33236065 cttcaatcagtcttaatttattttagaaaaacatgttatatagtccgtaattt 33236013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 14 - 152
Target Start/End: Original strand, 21606879 - 21607017
Alignment:
Q  14 ggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttca 113  Q
    ||||||||||||||  ||||||||||||||||| ||| ||| ||||||||||| || |||||||||||||||||||||||||| ||| ||||||||||||    
T  21606879 ggaggggagggtttacttttcatttttaaattacggaaactatgaaatgttttataaaaagttaacatattaacatgataaacgatcgtataatacttca 21606978  T
Q  114 atcacacttaatttattttagaaaaacattttatatagt 152  Q
     |||||||| ||||||||||||||||||| | |||||||    
T  21606979 gtcacactttatttattttagaaaaacatataatatagt 21607017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 4097563 - 4097672
Alignment:
Q  30 ttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttat 129  Q
    |||| |||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  4097563 ttttaatttttaaattacggacactttgaaatgttttttaaaaagttaacatattaacatgataaacgatcatataatacttcaatcacacttaatttat 4097662  T
Q  130 tttagaaaaa 139  Q
    ||| ||||||    
T  4097663 tttggaaaaa 4097672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 14 - 153
Target Start/End: Complemental strand, 31849319 - 31849180
Alignment:
Q  14 ggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttca 113  Q
    |||||||||||||   ||||||||||||||||| ||||||| | |||||| ||||| ||| ||||||||||||| ||||||||||| |||||||||||||    
T  31849319 ggaggggagggttcacttttcatttttaaattacggacactataaaatgtcttttaaaaaattaacatattaacgtgataaacaataatataatacttca 31849220  T
Q  114 atcacacttaatttattttagaaaaacattttatatagtc 153  Q
    ||||||||| |||||||||||||||| || ||||||||||    
T  31849219 atcacacttgatttattttagaaaaatatgttatatagtc 31849180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 5585323 - 5585484
Alignment:
Q  1 ttaggaggggaagggaggggagggtttg-tttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaat 99  Q
    |||||||||||||| | || || ||||  |||||| ||||||||||| | ||||| |||||||||||||| |||| |||||||||||||| |||||| ||    
T  5585323 ttaggaggggaaggaatggaagagtttactttttcttttttaaattacgaacactatgaaatgttttttaaaaaggtaacatattaacataataaacgat 5585422  T
Q  100 catataatacttcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
     ||| |||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  5585423 tatacaatatttcaatcacacttaatttattttagaaaaacatgttatatagtccgtaattt 5585484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 14 - 161
Target Start/End: Complemental strand, 1300829 - 1300681
Alignment:
Q  14 ggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttca 113  Q
    ||||||||||||||  ||||||||||||||||| ||||| | |||||| |||| || ||||||||||||||||| |||||||||||||||||||||||||    
T  1300829 ggaggggagggtttacttttcatttttaaattacggacaatatgaaatattttataaaaagttaacatattaacctgataaacaatcatataatacttca 1300730  T
Q  114 atcacacttaatttat-tttagaaaaacattttatatagtccctaattt 161  Q
    |||||||||||||||| || | ||||| || ||||||| ||| ||||||    
T  1300729 atcacacttaatttatcttgaaaaaaatatgttatataatccgtaattt 1300681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 10818438 - 10818315
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    |||||||||| ||||||||||||||||  ||||||||||||||||| ||||||| |||||||||||||| ||  |||||||||||||||||||||  |||    
T  10818438 ttaggaggggtagggaggggagggtttacttttcatttttaaattacggacactatgaaatgttttttaaaatattaacatattaacatgataaatgatc 10818339  T
Q  101 atataatacttcaatcacacttaa 124  Q
    ||||||||||||||||||| ||||    
T  10818338 atataatacttcaatcacatttaa 10818315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 30 - 161
Target Start/End: Complemental strand, 34176528 - 34176397
Alignment:
Q  30 ttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttat 129  Q
    ||||||||||||||||| ||||||| |||||| ||||||  ||||||||||||||||||| |||||| ||| ||||||||| ||||||||||| ||||||    
T  34176528 ttttcatttttaaattacggacactatgaaatattttttttaaagttaacatattaacataataaacgatcgtataatactgcaatcacacttgatttat 34176429  T
Q  130 tttagaaaaacattttatatagtccctaattt 161  Q
    ||||||||||||| ||||||| ||| ||||||    
T  34176428 tttagaaaaacatgttatataatccgtaattt 34176397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 19278056 - 19278220
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatat----taacatgataaac 96  Q
    |||||||||||||| ||| ||| ||||  |||||||||||||||||  |||||| | |||| ||||||| |||||| ||||||    |||||||||||||    
T  19278056 ttaggaggggaaggaaggagagagtttacttttcatttttaaattactgacactataaaatattttttaaaaagttgacatatatattaacatgataaac 19278155  T
Q  97 aatcatataatacttcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
     ||||||| |||||||||||| ||| |||||||||||||||||||| ||||||||||| ||||||    
T  19278156 gatcatatgatacttcaatcagactaaatttattttagaaaaacatgttatatagtccgtaattt 19278220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 1390541 - 1390381
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    |||||||||||| ||||| | || |||  |||||||||||||||||  |||||| |||||| ||||||| |||||||||||||||||||||||||  |||    
T  1390541 ttaggaggggaatggaggaggggttttacttttcatttttaaattactgacactatgaaatattttttaaaaagttaacatattaacatgataaatgatc 1390442  T
Q  101 atataatacttcaatcacacttaatttattttagaa-aaacattttatatagtccctaattt 161  Q
    | |||||| |||||||| |||||||||||||||||| |||||| ||| ||||||| ||||||    
T  1390441 a-ataatatttcaatcaaacttaatttattttagaataaacatgttacatagtccgtaattt 1390381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 14515693 - 14515551
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    |||||||||||||| | ||||||||||   |||||||||||||||||| ||||| | |||| ||||||  | ||||||||||| |||||||||||  ||     
T  14515693 ttaggaggggaaggaaagggagggtttagatttcatttttaaattatgaacactataaaatattttttgaagagttaacatatgaacatgataaatgata 14515594  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacatt 143  Q
    ||||||||||||| ||||||||||||||||||||| |||||||    
T  14515593 atataatacttcattcacacttaatttattttagagaaacatt 14515551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 665862 - 665995
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagtt-aacatattaacatgataaacaat 99  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||||| | | | |||||||| ||||| ||| || |||||||||||||||||||  ||    
T  665862 ttaggaggggaagtgaggggagggttcatttttcatttttaaattatgaatattatgaaatgtcttttaaaaattttaacatattaacatgataaatgat 665961  T
Q  100 catataatacttcaatcacacttaatttatttta 133  Q
     |||||||||||||| |||||||||||| |||||    
T  665962 gatataatacttcaaccacacttaatttttttta 665995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 49 - 150
Target Start/End: Complemental strand, 13583893 - 13583792
Alignment:
Q  49 gacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacattttata 148  Q
    |||||| |||||||||||||| ||| ||||||| ||||||| |||||  ||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  13583893 gacactatgaaatgttttttaaaaaattaacatgttaacataataaatgatcatataatatttcaatcacacttaatttattttagaaaaacatgttata 13583794  T
Q  149 ta 150  Q
    ||    
T  13583793 ta 13583792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 9 - 150
Target Start/End: Original strand, 16738026 - 16738167
Alignment:
Q  9 ggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataata 108  Q
    ||||| ||||||| | |||  ||||| ||||||||||||||| ||| |||||||||||||   || |||| ||| |||||||||| || |||||||||||    
T  16738026 ggaagagaggggaagatttacttttcgtttttaaattatggaaactatgaaatgttttttgataaattaaaataataacatgatatacgatcatataata 16738125  T
Q  109 cttcaatcacacttaatttattttagaaaaacattttatata 150  Q
    ||| ||| ||||||| ||||||||||||||||||||||||||    
T  16738126 cttaaataacacttactttattttagaaaaacattttatata 16738167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 30 - 116
Target Start/End: Complemental strand, 2900103 - 2900017
Alignment:
Q  30 ttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatc 116  Q
    |||||||||||||||||| |||||| ||||||||||| ||  |||||||||||||||||||||||||||||||||||||| ||||||    
T  2900103 ttttcatttttaaattatagacactatgaaatgttttataagaagttaacatattaacatgataaacaatcatataatacatcaatc 2900017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 14 - 153
Target Start/End: Complemental strand, 33041671 - 33041540
Alignment:
Q  14 ggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttca 113  Q
    |||||||| | ||| ||||| |||||||||||| ||| ||| |||||||||||||| ||||||||||||||||||||||||        |||| ||||||    
T  33041671 ggaggggaagatttattttttatttttaaattacggatactatgaaatgttttttaaaaagttaacatattaacatgataa--------ataacacttca 33041580  T
Q  114 atcacacttaatttattttagaaaaacattttatatagtc 153  Q
    |||||||||||||||||||| |||||||  ||||||||||    
T  33041579 atcacacttaatttattttaaaaaaacacattatatagtc 33041540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 39 - 154
Target Start/End: Original strand, 2892664 - 2892778
Alignment:
Q  39 ttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaa 138  Q
    |||||||| | ||||| ||| || ||||||| ||| |||| ||| ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  2892664 ttaaattacgcacactatgagatattttttaaaaa-ttaaaataataacatgataaacaatcatataatatttcaatcacactaaatttattttagaaaa 2892762  T
Q  139 acattttatatagtcc 154  Q
    || | |||||||||||    
T  2892763 acgtgttatatagtcc 2892778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 83 - 161
Target Start/End: Original strand, 12811085 - 12811162
Alignment:
Q  83 ttaacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  12811085 ttaacatgataaacaatcatatc-tacttcaatcacacttaatttattttagaaaaacatattatatagtctctaattt 12811162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 30 - 160
Target Start/End: Complemental strand, 1395829 - 1395698
Alignment:
Q  30 ttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttat 129  Q
    |||||||||||||||||   |||||||  ||||||||||| ||| ||||||||||| |||||||||  ||||| || || ||||||||||||||||||||    
T  1395829 ttttcatttttaaattactaacactgtagaatgttttttaaaaaattaacatattagcatgataaatgatcatgtattatttcaatcacacttaatttat 1395730  T
Q  130 ttta-gaaaaacattttatatagtccctaatt 160  Q
    ||||  |||||||| ||| ||||||| |||||    
T  1395729 tttataaaaaacatgttacatagtccgtaatt 1395698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 31 - 161
Target Start/End: Original strand, 10348850 - 10348981
Alignment:
Q  31 tttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttatt 130  Q
    |||||||||||||||| ||| | | |||||| | ||||| |||||||||||||||| | ||||||| || |||||||||||||||| ||||| | |||||    
T  10348850 tttcatttttaaattacggataatatgaaatatcttttaaaaagttaacatattaatacgataaacgataatataatacttcaatcgcacttgaattatt 10348949  T
Q  131 tt-agaaaaacattttatatagtccctaattt 161  Q
    || | |||||||| ||||||||||| ||||||    
T  10348950 ttaaaaaaaacatgttatatagtccgtaattt 10348981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 64 - 154
Target Start/End: Complemental strand, 25741566 - 25741476
Alignment:
Q  64 tttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacattttatatagtcc 154  Q
    |||||| |||||||||||| ||| ||||||||| ||||||||| |||||| |||| |||||||||||||| |||||||| |||||||||||    
T  25741566 tttttaaaaagttaacataataatatgataaacgatcatataaaacttcagtcacgcttaatttattttaaaaaaacatgttatatagtcc 25741476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 26318527 - 26318379
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    ||||||||| ||||||||||| | |||  ||||| |||||||||||||||   | | |||||  ||||||||| || |  ||  ||||||||||   |||    
T  26318527 ttaggagggaaagggaggggaagatttacttttcttttttaaattatggattttataaaatgacttttagaaaattgaattaacaacatgataattgatc 26318428  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacattttatat 149  Q
    ||||||||||||||  ||||||||||||||||| |||||||||||||||    
T  26318427 atataatacttcaaaaacacttaatttattttaaaaaaacattttatat 26318379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 2893752 - 2893700
Alignment:
Q  101 atataatacttcaatcacacttaatttattttagaaaaacattttatatagtc 153  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  2893752 atataatacatcaatcacacttaatttattttagaaaaacatgttatatagtc 2893700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 14515495 - 14515545
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggac 51  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  14515495 ttaggaggggaagggaggggagggtttgtttttcttttttaaattacggac 14515545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 150
Target Start/End: Original strand, 30849948 - 30850083
Alignment:
Q  13 gggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttc 112  Q
    ||||||||||| |||   |||| ||||||||||| | | ||| | |||| ||||||| ||  |||| ||| ||||||||||||| |||||||||||||||    
T  30849948 gggaggggaggatttacatttcgtttttaaattacgcatactataaaatattttttaaaa--ttaaaataataacatgataaacgatcatataatacttc 30850045  T
Q  113 aatcacacttaatttattttagaaaaacattttatata 150  Q
    ||| | ||| ||||| ||||| |||||||| |||||||    
T  30850046 aattatactaaatttgttttaaaaaaacatattatata 30850083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 84 - 152
Target Start/End: Complemental strand, 32926784 - 32926716
Alignment:
Q  84 taacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacattttatatagt 152  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||| | ||| | ||||| ||||||    
T  32926784 taacatgataaatgatcatataatacttcaatcacacttaatttatttaaaaaatatattttttatagt 32926716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 121
Target Start/End: Original strand, 2892900 - 2892985
Alignment:
Q  36 tttttaaattatggacactgtgaaatgtttt-ttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacact 121  Q
    ||||||||||| | ||||| |||||| |||| | |||||| ||| ||| ||||||||||||| ||||||||||||||||||||||||    
T  2892900 tttttaaattacgcacactatgaaatattttgtaagaaag-taaaataataacatgataaacgatcatataatacttcaatcacact 2892985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 64 - 153
Target Start/End: Complemental strand, 25747493 - 25747403
Alignment:
Q  64 tttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttatttt-agaaaaacattttatatagtc 153  Q
    |||||| |||||||| ||| ||||||||||||| ||||||||| |||||| ||||  |||||| ||||| | |||||||| ||||||||||    
T  25747493 tttttaaaaagttaatataataacatgataaacgatcatataaaacttcagtcacgtttaattgattttaaaaaaaacatgttatatagtc 25747403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 153
Target Start/End: Original strand, 6034201 - 6034246
Alignment:
Q  108 acttcaatcacacttaatttattttagaaaaacattttatatagtc 153  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||    
T  6034201 acttcaatcacacttaatttattttagaaaaacatgttatacagtc 6034246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 161
Target Start/End: Original strand, 14548711 - 14548788
Alignment:
Q  84 taacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    |||||| |||||  ||||||||||  |||||||||| ||||||||||||| || |||||||||||| |||| ||||||    
T  14548711 taacattataaatgatcatataatggttcaatcacagttaatttattttaaaataacattttatattgtccgtaattt 14548788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 25468422 - 25468562
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    ||||||||| ||| ||||| ||| |||  ||||| ||||||||||||||||| | | ||||  |||| ||||| ||||  ||  ||| |||||||  ||     
T  25468422 ttaggagggaaagagaggg-aggttttacttttcttttttaaattatggacattataaaataattttaagaaaattaatttaacaacgtgataaatgatt 25468520  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacat 142  Q
    ||||||||||||||  ||||||||||||||||| ||||||||    
T  25468521 atataatacttcaaaaacacttaatttattttaaaaaaacat 25468562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 29490475 - 29490548
Alignment:
Q  59 aatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttatttt 132  Q
    ||||| ||||| ||||||||| |||||||| ||||||  |||||||||||||| |||||| ||||||| |||||    
T  29490475 aatgtattttaaaaagttaacgtattaacaagataaaatatcatataatacttaaatcacgcttaattgatttt 29490548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 9298701 - 9298625
Alignment:
Q  8 gggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgtt-ttttagaaagttaacatat 83  Q
    |||| |||||||||||||||  |||||| |||||||||| ||||| | ||||||||| ||||| |||||||||||||    
T  9298701 gggaggggaggggagggtttacttttcaattttaaattacggacattatgaaatgtttttttaaaaagttaacatat 9298625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 32922484 - 32922437
Alignment:
Q  84 taacatgataaacaatcatataatacttcaatcacacttaatttattt 131  Q
    |||||||||||| |||||||||||||||| |||||||||||| |||||    
T  32922484 taacatgataaataatcatataatacttcgatcacacttaatatattt 32922437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 98 - 148
Target Start/End: Complemental strand, 16509405 - 16509356
Alignment:
Q  98 atcatataatacttcaatcacacttaatttattttagaaaaacattttata 148  Q
    ||||||||||||||||||||||||| |||||||||  ||||||||||||||    
T  16509405 atcatataatacttcaatcacacttgatttatttt-taaaaacattttata 16509356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 103 - 146
Target Start/End: Original strand, 382978 - 383021
Alignment:
Q  103 ataatacttcaatcacacttaatttattttagaaaaacatttta 146  Q
    ||||||||||||  ||||||||||||||||| ||||||||||||    
T  382978 ataatacttcaaaaacacttaatttattttaaaaaaacatttta 383021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 85 - 128
Target Start/End: Complemental strand, 3023650 - 3023607
Alignment:
Q  85 aacatgataaacaatcatataatacttcaatcacacttaattta 128  Q
    ||||||||||| |||||||||||| |||| ||||||||||||||    
T  3023650 aacatgataaataatcatataatatttcattcacacttaattta 3023607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 10818251 - 10818302
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggaca 52  Q
    |||||||||||||||||||||  |||| |||||| ||||||||||| |||||    
T  10818251 ttaggaggggaagggaggggattgtttatttttcttttttaaattacggaca 10818302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 139
Target Start/End: Original strand, 5381305 - 5381343
Alignment:
Q  101 atataatacttcaatcacacttaatttattttagaaaaa 139  Q
    |||||||||||||||||| |||||||||||||| |||||    
T  5381305 atataatacttcaatcacgcttaatttattttaaaaaaa 5381343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 19278259 - 19278210
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggac 51  Q
    |||||||||||||||||||||||||||  ||||| ||||||||||| ||||    
T  19278259 ttaggaggggaagggaggggagggttt-attttcttttttaaattacggac 19278210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 84 - 133
Target Start/End: Complemental strand, 17155495 - 17155446
Alignment:
Q  84 taacatgataaacaatcatataatacttcaatcacacttaatttatttta 133  Q
    |||||||||||   |||||||||||||| |||||||||||||| ||||||    
T  17155495 taacatgataactgatcatataatacttaaatcacacttaattgatttta 17155446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 14515521 - 14515489
Alignment:
Q  176 aaaccctctcctcccttcccctcctaaaccctc 208  Q
    |||||||| ||||||||||||||||||||||||    
T  14515521 aaaccctcccctcccttcccctcctaaaccctc 14515489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 39208 - 39372
Alignment:
Q  1 ttaggaggggaagggagggg-agggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaat 99  Q
    ||||||||||||  |||||| |||||||  ||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||  ||    
T  39208 ttaggaggggaaatgagggggagggtttacttttcatttttaaattacggacactatgaaatgttttttaaaaagttaacatattaacatgataaatgat 39307  T
Q  100 catataata---cttcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    |||||||||   |||||||||||||||||||||||||||||||||| ||| ||||||| ||||||    
T  39308 catataatacttcttcaatcacacttaatttattttagaaaaacatgttacatagtccgtaattt 39372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 16172 - 16020
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc 100  Q
    ||||||||||||||||||  || |||| |||||||||||||||||| ||| | | |||||||||||||| |||||||||||||||| |||| |||||||     
T  16172 ttaggaggggaagggaggaaagagtttatttttcatttttaaattacggatattatgaaatgttttttaaaaagttaacatattaatatgaaaaacaatt 16073  T
Q  101 atataatacttcaatcacacttaatttattttagaaaaacattttatatagtc 153  Q
    ||| |||||||||||||||| |||||| ||||| |||||||| ||||||||||    
T  16072 ataaaatacttcaatcacacataattttttttaaaaaaacatgttatatagtc 16020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 30 - 147
Target Start/End: Complemental strand, 15455 - 15339
Alignment:
Q  30 ttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttat 129  Q
    |||| |||||||||||| ||||||| |||| ||||||||| || || ||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  15455 tttttatttttaaattacggacactatgaa-tgttttttaaaaggtcaacatattaacgtgataaacaatcatataatacttcaaccacacttaatttat 15357  T
Q  130 tttagaaaaacattttat 147  Q
    ||||||||||||| ||||    
T  15356 tttagaaaaacatgttat 15339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 64; Significance: 4e-28; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 153
Target Start/End: Complemental strand, 6792 - 6654
Alignment:
Q  14 ggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttca 113  Q
    ||||||||||| ||  ||||| ||||||||||| | ||||| |||||| ||||| | ||| |||| |||||||||| |||||| ||||||||||||||||    
T  6792 ggaggggagggcttacttttcgtttttaaattacgcacactatgaaatatttttaaaaaaattaaaatattaacat-ataaacgatcatataatacttca 6694  T
Q  114 atcacacttaatttattttagaaaaacattttatatagtc 153  Q
    |||||||| |||||||||||||| ||||  ||||||||||    
T  6693 atcacactaaatttattttagaataacaagttatatagtc 6654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 6606 - 6651
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaatta 46  Q
    |||||||| ||||||||||||||||||  ||||| |||||||||||    
T  6606 ttaggaggagaagggaggggagggtttacttttcttttttaaatta 6651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 5 - 153
Target Start/End: Complemental strand, 18987 - 18840
Alignment:
Q  5 gaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatat 104  Q
    |||||||| | ||| ||||||||  |||||||||||||||   ||||||| |||| | |||||||  ||||||| |||||||||||||||| | ||||||    
T  18987 gaggggaaagaaggagagggtttacttttcatttttaaatcgaggacactatgaactattttttaagaagttaatatattaacatgataaaga-tcatat 18889  T
Q  105 aatacttcaatcacacttaatttattttagaaaaacattttatatagtc 153  Q
    |||| |||||| |||| |||||||||||||||| |||| ||||||||||    
T  18888 aataattcaatgacacataatttattttagaaagacatgttatatagtc 18840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 14 - 161
Target Start/End: Complemental strand, 1381 - 1234
Alignment:
Q  14 ggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatc----atataatac 109  Q
    |||||||| |||||  ||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||  |||||||||| |||    |||||||||    
T  1381 ggaggggaaggtttacttttcatttttaaattatgaacactatgaaatgttttttaaaaagttaacatattgtcatgataaacgatcatatatataatac 1282  T
Q  110 ttcaatcacacttaatttattttagaaaaacattttatatagtccctaattt 161  Q
    |||| ||| |||||    ||||||||| ||||| ||| ||||||| ||||||    
T  1281 ttcagtcatactta----attttagaataacatgttacatagtccgtaattt 1234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 3169 - 3235
Alignment:
Q  1 ttaggaggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgttttt 67  Q
    |||||||||||||||||||||| ||||  ||||| |||||||||||  |||||| ||||||||||||    
T  3169 ttaggaggggaagggaggggagagtttacttttcttttttaaattacagacactatgaaatgttttt 3235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 69316 - 69378
Alignment:
Q  88 atgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacattttatata 150  Q
    ||||||||  |||||||||||||||  |||| |||||||||||||| ||||||||||||||||    
T  69316 atgataaatgatcatataatacttctgtcacccttaatttattttaaaaaaacattttatata 69378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 81516 - 81564
Alignment:
Q  84 taacatgataaacaatcatataatacttcaatcacacttaatttatttt 132  Q
    ||||||||||||  |||||||||||||||||||| |||| |||||||||    
T  81516 taacatgataaatgatcatataatacttcaatcatacttgatttatttt 81564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 6 - 69
Target Start/End: Complemental strand, 242433 - 242370
Alignment:
Q  6 aggggaagggaggggagggtttgtttttcatttttaaattatggacactgtgaaatgtttttta 69  Q
    ||||||||||||||||||||||  ||||| ||||||||||| ||||| | | ||||| ||||||    
T  242433 aggggaagggaggggagggtttacttttcttttttaaattacggacattataaaatgattttta 242370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 85 - 146
Target Start/End: Complemental strand, 37521 - 37460
Alignment:
Q  85 aacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacatttta 146  Q
    ||||||||||   ||||||||| |||||||  |||||| |||||||||| ||||||||||||    
T  37521 aacatgataagtgatcatataacacttcaaaaacacttgatttattttaaaaaaacatttta 37460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 30 - 131
Target Start/End: Complemental strand, 53078 - 52977
Alignment:
Q  30 ttttcatttttaaattatggacactgtgaaatgttttttagaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttat 129  Q
    ||||| |||||||||||||| || | ||||||| ||||| |||| || |  ||  |||||||||||  ||||||||||| |||||  ||||||||| |||    
T  53078 ttttcttttttaaattatgggcattatgaaatgattttttgaaaattgaactaacaacatgataaatgatcatataatatttcaaaaacacttaatgtat 52979  T
Q  130 tt 131  Q
    ||    
T  52978 tt 52977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0783 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0783
Description:

Target: scaffold0783; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 6015 - 6063
Alignment:
Q  84 taacatgataaacaatcatataatacttcaatcacacttaatttatttt 132  Q
    ||||||||||||  |||||||||||||| ||||| |||| |||||||||    
T  6015 taacatgataaatgatcatataatacttgaatcatacttgatttatttt 6063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 124
Target Start/End: Original strand, 100653 - 100693
Alignment:
Q  84 taacatgataaacaatcatataatacttcaatcacacttaa 124  Q
    |||||||||||| |||||||||| | |||||||||||||||    
T  100653 taacatgataaataatcatataacaattcaatcacacttaa 100693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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