View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21008_high_7 (Length: 430)
Name: NF21008_high_7
Description: NF21008
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21008_high_7 |
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Alignment Details
Target: chr8 (Bit Score: 373; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 373; E-Value: 0
Query Start/End: Original strand, 19 - 415
Target Start/End: Complemental strand, 26181579 - 26181183
Alignment:
| Q |
19 |
cacacacaagaagaagaatgagcgttcaagctaatttttatagctttgggcatgataataccactcataagtataagattgttgctatttcttttatccg |
118 |
Q |
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| T |
26181579 |
cacacacaagaagaagaatgagcgttcaagctaacttttatagctttgggtatgataataccactcataagtataagattgttgctatttcttttatccg |
26181480 |
T |
|
| Q |
119 |
caaaccccccacccctaaaactagtatttataccttggggtccgatcctacggattgttcctggagggcgatccatgactttccaaaacgttgcagtaac |
218 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26181479 |
caaaccccccactcctaaaactagtatttataccttggggtccgatcctacggattgttcctggagggcgatccatgactttccaaaacgttgcagtaac |
26181380 |
T |
|
| Q |
219 |
acacttcctaaaacgggactatttctgagtgggacagttaattggttagctggtgagcttttttctcttgatctggccactgagacataccagaagcttt |
318 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
26181379 |
acacttcctaaaacgggactatttctgagtgggacagttaattggttagctggtgagcttttttctcttgatctagccactgagacataccagaagcttt |
26181280 |
T |
|
| Q |
319 |
tgcttcctactgctagaggaaagggtagtttgaccttgggtgtcataaaggatttcttgtgcatatttgattgcaatgataggggtacagatatatg |
415 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26181279 |
tgcttcctacttctagaggaaagggtagtttgaccttgggtgtcttaaaggatttcttgtgcatatttgattgcaatgataggggtacagatatatg |
26181183 |
T |
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