View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21009_high_16 (Length: 266)
Name: NF21009_high_16
Description: NF21009
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21009_high_16 |
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Alignment Details
Target: chr1 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 50765135 - 50765390
Alignment:
| Q |
1 |
atgtgggattcaacatactgaatatgctttataaattaagaaattatttatcctaaatttaaaggtcattgctctcgacattgactccaccatggcacta |
100 |
Q |
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| T |
50765135 |
atgtgggattcaacatactgaatatgctttataaattaagaaattatttatcctaaatttaaaggtcattgctctcgacattgactccaccatggtacta |
50765234 |
T |
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| Q |
101 |
aattataacaaaaaatggaggcaagtttggtcctggaggctcgccggggcagagaaacccccaatgcagtcatcacattggtagcaggattcaaacttag |
200 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50765235 |
aattatgacaaaaaatggaggcaagtttggtcctggaggctcgccggggcagagaaacccccaatgcagtcatcacattggtagcaggattcaaacttag |
50765334 |
T |
|
| Q |
201 |
gtctagtgggacttgagttgaatctttaccgactagaccaacttacatcacctttg |
256 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50765335 |
gtctagtgggacttgagttgaatctttaccgactagaccaacttacatcacctttg |
50765390 |
T |
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