View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21009_high_17 (Length: 250)
Name: NF21009_high_17
Description: NF21009
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21009_high_17 |
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Alignment Details
Target: chr1 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 7 - 243
Target Start/End: Original strand, 2173934 - 2174170
Alignment:
| Q |
7 |
gagagatgaataggtgcatataattagcggatttcaacgggaaacaaatagtgtgaaagaaaaacaaacagtcaatacatgaggaaatgataatttcatg |
106 |
Q |
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| T |
2173934 |
gagaaatgaataggtgcatataattagcggatttcaacgggaaacaaatagtgtgaaagaaaaacaaacagtcaatacatgaggaaatgataatttcatg |
2174033 |
T |
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| Q |
107 |
ttccttgaatgttggcttatttggcaatgttgatgaaggaagttctaggttaggtaatagtaatatagaaaagattaaagtatttaatcacaagggtaaa |
206 |
Q |
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| T |
2174034 |
ttccttgaatgttggcttatttggcaatgttgatgaaggaagttctaggttaggtaataataatatagaaaagattaaagtatttaatcacaagggtaaa |
2174133 |
T |
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| Q |
207 |
atagataatattccttgtcacactatatgcattttga |
243 |
Q |
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| T |
2174134 |
atagataatattccttgtcacactatatgcattttga |
2174170 |
T |
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