View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21009_low_17 (Length: 267)
Name: NF21009_low_17
Description: NF21009
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21009_low_17 |
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Alignment Details
Target: chr1 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 25811895 - 25812144
Alignment:
| Q |
1 |
gactttatttgatcctaagacattgagagatactccatcatgaaaaacataaatacatcatcaaacctaaatcttattttaatatcactaaaacaaacta |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25811895 |
gactttatttgatcctaagacattgagagatactccatcatgaaaaacataaatacatcatcaaacctaaatcttattttaatatcactaaaacaaacta |
25811994 |
T |
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| Q |
101 |
aatcatacactaggagagacatggactcgcaaattcctctaccaacacatccacaacgtgtgtccttggttgttagtatgaacccagaagtggctccgac |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25811995 |
aatcatacactaggagagacatggactcgcaaattcctctaccaacacatccacaacgtgtgtccttggttgttagtatgaacccagaagtggctccgag |
25812094 |
T |
|
| Q |
201 |
annnnnnnnnnaagcatggtactactaaaaattcaatattttagtcgtcat |
251 |
Q |
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| |||||||||||||||||||||||||||||||||||||||| |
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| T |
25812095 |
a-tttttttttaagcatggtactactaaaaattcaatattttagtcgtcat |
25812144 |
T |
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