View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21011_low_2 (Length: 335)
Name: NF21011_low_2
Description: NF21011
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21011_low_2 |
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Alignment Details
Target: chr1 (Bit Score: 290; Significance: 1e-163; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 290; E-Value: 1e-163
Query Start/End: Original strand, 18 - 327
Target Start/End: Original strand, 34940083 - 34940392
Alignment:
| Q |
18 |
tcaaatggacaagatattatcccaatcatttttagcctctaaatctagaaccttttccaaagtttgtagatgtgagtactctttgggttagtagcattat |
117 |
Q |
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| T |
34940083 |
tcaaatggacaagatattatcccaatcatttttagcctctaaatctagaaccttttccaaagtttgtagatgtcagtactctttgggttagtagcattat |
34940182 |
T |
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| Q |
118 |
tcgtcattatttttcacaaataatgctattctataagaatattatgaacatttttcgggatcaaattagcatataaactatctagaagctcttactagat |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34940183 |
tcgtcattatttttcacaaataatgctattctataagaatattatgaacatttttcgggatcaaattagcatataaactatctagaagctcttactagat |
34940282 |
T |
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| Q |
218 |
aaaactatcaacggatgccaatatgaaaataccctttaataaaataatctcacaatcgaatttagcaaaataaactaaactccggtgacacgatgaatca |
317 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
34940283 |
aaaactaccaacggatgccaatatgaaaataccctttaataaaataatctcacattcgaatttagcaaaataaactaaactcccgtgacacgatgaatca |
34940382 |
T |
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| Q |
318 |
acatccctct |
327 |
Q |
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| |||||||| |
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| T |
34940383 |
atatccctct |
34940392 |
T |
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