View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21013_high_1 (Length: 404)

Name: NF21013_high_1
Description: NF21013
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21013_high_1
NF21013_high_1
[»] chr7 (35 HSPs)
chr7 (3-327)||(18873217-18873539)
chr7 (132-327)||(15168032-15168227)
chr7 (12-327)||(14422841-14423154)
chr7 (133-327)||(10895795-10895989)
chr7 (124-324)||(12709839-12710038)
chr7 (124-324)||(13122910-13123109)
chr7 (124-327)||(13743566-13743768)
chr7 (132-307)||(16009454-16009628)
chr7 (124-320)||(12590639-12590832)
chr7 (124-242)||(13007374-13007491)
chr7 (132-297)||(16677180-16677347)
chr7 (132-297)||(17651416-17651583)
chr7 (3-69)||(19617474-19617540)
chr7 (12-69)||(14113446-14113503)
chr7 (132-184)||(11382874-11382926)
chr7 (132-184)||(11389351-11389403)
chr7 (132-184)||(20311055-20311107)
chr7 (132-184)||(21230963-21231015)
chr7 (13-62)||(11304303-11304352)
chr7 (13-62)||(23664012-23664061)
chr7 (13-62)||(29797665-29797714)
chr7 (13-62)||(29801484-29801533)
chr7 (18-69)||(4281229-4281281)
chr7 (132-192)||(13679485-13679545)
chr7 (27-69)||(36305145-36305187)
chr7 (16-69)||(41780943-41780995)
chr7 (16-68)||(19152934-19152985)
chr7 (16-68)||(20752333-20752384)
chr7 (132-183)||(2971254-2971305)
chr7 (132-183)||(11311059-11311110)
chr7 (132-183)||(20906465-20906516)
chr7 (134-185)||(46625961-46626012)
chr7 (124-164)||(831629-831669)
chr7 (124-164)||(1196809-1196849)
chr7 (124-164)||(34958578-34958618)
[»] chr5 (19 HSPs)
chr5 (3-327)||(22750998-22751320)
chr5 (3-307)||(28369930-28370232)
chr5 (3-307)||(19512263-19512565)
chr5 (124-307)||(38144532-38144714)
chr5 (119-242)||(23528573-23528695)
chr5 (2-193)||(23111075-23111264)
chr5 (132-193)||(18407947-18408008)
chr5 (132-184)||(22438751-22438803)
chr5 (3-69)||(22006766-22006832)
chr5 (12-62)||(22337647-22337697)
chr5 (12-62)||(22341185-22341235)
chr5 (13-62)||(9777219-9777268)
chr5 (16-69)||(23528756-23528809)
chr5 (12-69)||(37803960-37804018)
chr5 (3-57)||(38144412-38144466)
chr5 (132-183)||(19236900-19236951)
chr5 (16-69)||(21900899-21900951)
chr5 (132-181)||(22461158-22461207)
chr5 (132-181)||(22467782-22467831)
[»] scaffold0029 (1 HSPs)
scaffold0029 (124-327)||(111738-111942)
[»] scaffold0026 (5 HSPs)
scaffold0026 (124-327)||(11846-12049)
scaffold0026 (132-307)||(111563-111737)
scaffold0026 (27-69)||(67304-67346)
scaffold0026 (26-69)||(121323-121366)
scaffold0026 (16-69)||(143748-143800)
[»] chr3 (38 HSPs)
chr3 (132-327)||(14762761-14762956)
chr3 (132-327)||(20247792-20247987)
chr3 (132-327)||(38310803-38310998)
chr3 (3-307)||(9534205-9534507)
chr3 (132-322)||(24192817-24193008)
chr3 (132-307)||(23370509-23370684)
chr3 (132-242)||(24933832-24933941)
chr3 (124-210)||(41455093-41455178)
chr3 (124-268)||(16801463-16801606)
chr3 (132-307)||(55499105-55499281)
chr3 (3-69)||(14085710-14085776)
chr3 (3-69)||(49400710-49400776)
chr3 (3-69)||(14091111-14091177)
chr3 (12-67)||(8579131-8579186)
chr3 (3-62)||(16801147-16801206)
chr3 (3-62)||(20247666-20247725)
chr3 (19-69)||(17240407-17240457)
chr3 (132-190)||(18929239-18929297)
chr3 (132-193)||(17240516-17240577)
chr3 (3-62)||(54521876-54521935)
chr3 (15-62)||(38310689-38310736)
chr3 (3-57)||(24193082-24193136)
chr3 (132-183)||(13302244-13302295)
chr3 (132-183)||(13323791-13323842)
chr3 (27-69)||(31689679-31689721)
chr3 (27-69)||(31944505-31944547)
chr3 (132-183)||(12033448-12033499)
chr3 (132-183)||(13312900-13312951)
chr3 (132-183)||(17131732-17131783)
chr3 (132-183)||(51301589-51301640)
chr3 (132-242)||(10389447-10389557)
chr3 (132-242)||(10414536-10414646)
chr3 (132-242)||(10421206-10421316)
chr3 (19-69)||(14288082-14288131)
chr3 (3-48)||(11849482-11849527)
chr3 (3-48)||(13666972-13667017)
chr3 (132-185)||(16801027-16801080)
chr3 (16-69)||(35985768-35985820)
[»] chr6 (33 HSPs)
chr6 (132-327)||(23057795-23057990)
chr6 (2-307)||(23839075-23839378)
chr6 (124-327)||(29614142-29614345)
chr6 (124-325)||(18800296-18800497)
chr6 (132-327)||(4477714-4477909)
chr6 (132-307)||(10986184-10986359)
chr6 (124-261)||(930091-930227)
chr6 (124-242)||(12168305-12168422)
chr6 (124-242)||(19287214-19287331)
chr6 (124-242)||(19785865-19785982)
chr6 (124-242)||(19878398-19878515)
chr6 (124-242)||(19884174-19884291)
chr6 (132-211)||(34639990-34640069)
chr6 (132-327)||(21565215-21565410)
chr6 (132-211)||(34646664-34646743)
chr6 (132-242)||(25469708-25469816)
chr6 (12-185)||(25397172-25397343)
chr6 (3-62)||(2286644-2286703)
chr6 (3-69)||(9187606-9187672)
chr6 (12-69)||(23058055-23058112)
chr6 (3-62)||(29483308-29483367)
chr6 (136-184)||(24512851-24512899)
chr6 (26-69)||(8767115-8767158)
chr6 (26-69)||(14615340-14615383)
chr6 (3-68)||(933538-933603)
chr6 (132-181)||(9187498-9187547)
chr6 (132-185)||(25348486-25348539)
chr6 (132-185)||(25598643-25598696)
chr6 (3-69)||(12943237-12943304)
chr6 (132-185)||(2286770-2286823)
chr6 (132-185)||(19471338-19471391)
chr6 (27-68)||(24512754-24512795)
chr6 (132-193)||(31252413-31252474)
[»] scaffold1773 (1 HSPs)
scaffold1773 (124-327)||(1036-1237)
[»] scaffold0006 (1 HSPs)
scaffold0006 (124-327)||(50037-50238)
[»] scaffold0456 (4 HSPs)
scaffold0456 (3-211)||(8049-8255)
scaffold0456 (3-211)||(904-1110)
scaffold0456 (274-327)||(846-899)
scaffold0456 (274-327)||(7991-8044)
[»] chr1 (22 HSPs)
chr1 (12-307)||(20436910-20437202)
chr1 (12-193)||(32651563-32651741)
chr1 (124-242)||(41111977-41112094)
chr1 (3-69)||(21543235-21543301)
chr1 (3-68)||(42094838-42094903)
chr1 (132-193)||(18712790-18712851)
chr1 (16-69)||(20850113-20850166)
chr1 (132-184)||(19663520-19663572)
chr1 (26-69)||(29553504-29553547)
chr1 (132-185)||(10811786-10811839)
chr1 (132-185)||(20805320-20805373)
chr1 (132-184)||(11158093-11158145)
chr1 (19-69)||(19663410-19663461)
chr1 (3-45)||(16373102-16373144)
chr1 (27-69)||(19777713-19777755)
chr1 (26-69)||(18712910-18712954)
chr1 (132-183)||(20851136-20851187)
chr1 (132-183)||(20857763-20857814)
chr1 (132-183)||(21706276-21706327)
chr1 (132-183)||(21710818-21710869)
chr1 (12-65)||(11158207-11158261)
chr1 (16-69)||(5381713-5381765)
[»] chr4 (19 HSPs)
chr4 (124-327)||(8045828-8046030)
chr4 (124-327)||(11847964-11848173)
chr4 (132-242)||(53483646-53483756)
chr4 (2-184)||(18213768-18213948)
chr4 (3-67)||(16157902-16157966)
chr4 (3-62)||(2757449-2757508)
chr4 (132-184)||(15408139-15408191)
chr4 (3-62)||(15535235-15535294)
chr4 (19-62)||(49546840-49546883)
chr4 (27-69)||(14063794-14063836)
chr4 (132-185)||(8834895-8834948)
chr4 (132-185)||(13888641-13888694)
chr4 (132-183)||(14486661-14486712)
chr4 (134-185)||(22724691-22724742)
chr4 (132-185)||(15245215-15245268)
chr4 (134-185)||(15308120-15308171)
chr4 (15-69)||(43283943-43283997)
chr4 (134-183)||(27906266-27906315)
chr4 (124-164)||(15747552-15747592)
[»] scaffold0025 (2 HSPs)
scaffold0025 (132-327)||(14399-14595)
scaffold0025 (3-57)||(14271-14325)
[»] scaffold0924 (1 HSPs)
scaffold0924 (124-327)||(746-949)
[»] chr2 (25 HSPs)
chr2 (3-307)||(6483595-6483898)
chr2 (3-307)||(6487062-6487365)
chr2 (132-327)||(19661457-19661651)
chr2 (124-297)||(26583715-26583886)
chr2 (132-307)||(23878885-23879059)
chr2 (132-327)||(23089058-23089253)
chr2 (132-307)||(23101466-23101641)
chr2 (3-69)||(6743178-6743244)
chr2 (3-69)||(43694579-43694645)
chr2 (132-242)||(5706027-5706137)
chr2 (132-193)||(23265133-23265194)
chr2 (132-193)||(23280201-23280262)
chr2 (15-69)||(9243074-9243128)
chr2 (132-190)||(21908353-21908411)
chr2 (3-62)||(10683812-10683871)
chr2 (3-62)||(20262273-20262332)
chr2 (26-69)||(24944417-24944460)
chr2 (132-185)||(24661576-24661629)
chr2 (132-183)||(10577-10628)
chr2 (132-183)||(25180933-25180984)
chr2 (16-69)||(20649164-20649217)
chr2 (3-69)||(201800-201870)
chr2 (132-232)||(26885133-26885233)
chr2 (26-69)||(23265254-23265298)
chr2 (26-69)||(23280322-23280366)
[»] scaffold0247 (1 HSPs)
scaffold0247 (124-306)||(11219-11401)
[»] chr8 (19 HSPs)
chr8 (132-307)||(44477500-44477674)
chr8 (132-307)||(44492658-44492832)
chr8 (124-308)||(23866490-23866674)
chr8 (132-307)||(8727736-8727911)
chr8 (3-185)||(18614271-18614449)
chr8 (12-193)||(23481938-23482117)
chr8 (132-242)||(17054533-17054642)
chr8 (3-69)||(23826319-23826385)
chr8 (220-307)||(27940946-27941032)
chr8 (14-58)||(8727622-8727666)
chr8 (27-69)||(21283111-21283153)
chr8 (132-185)||(39364919-39364972)
chr8 (132-183)||(29643389-29643440)
chr8 (27-69)||(21321078-21321120)
chr8 (132-184)||(14056567-14056619)
chr8 (27-67)||(21325676-21325716)
chr8 (132-184)||(25111976-25112028)
chr8 (132-183)||(24320674-24320725)
chr8 (132-185)||(21931696-21931749)
[»] scaffold0117 (2 HSPs)
scaffold0117 (124-327)||(1893-2095)
scaffold0117 (124-327)||(8570-8772)
[»] scaffold0058 (1 HSPs)
scaffold0058 (124-327)||(149-350)
[»] scaffold0553 (1 HSPs)
scaffold0553 (132-307)||(10199-10374)
[»] scaffold0544 (1 HSPs)
scaffold0544 (132-307)||(1529-1704)
[»] scaffold0090 (1 HSPs)
scaffold0090 (124-326)||(18026-18229)
[»] scaffold0004 (1 HSPs)
scaffold0004 (3-193)||(116887-117074)
[»] scaffold0154 (2 HSPs)
scaffold0154 (124-268)||(30772-30917)
scaffold0154 (3-69)||(17463-17530)
[»] scaffold0796 (2 HSPs)
scaffold0796 (124-242)||(1728-1845)
scaffold0796 (124-242)||(5751-5868)
[»] scaffold0476 (1 HSPs)
scaffold0476 (132-325)||(3296-3490)
[»] scaffold0077 (1 HSPs)
scaffold0077 (132-307)||(3625-3800)
[»] scaffold0337 (1 HSPs)
scaffold0337 (2-184)||(8645-8825)
[»] scaffold0106 (1 HSPs)
scaffold0106 (3-69)||(39580-39646)
[»] scaffold0104 (2 HSPs)
scaffold0104 (3-69)||(12916-12982)
scaffold0104 (14-69)||(40693-40748)
[»] scaffold0076 (2 HSPs)
scaffold0076 (3-69)||(29077-29143)
scaffold0076 (3-69)||(34478-34544)
[»] scaffold0028 (3 HSPs)
scaffold0028 (3-69)||(45911-45977)
scaffold0028 (3-69)||(51315-51381)
scaffold0028 (31-181)||(69749-69896)
[»] scaffold0011 (1 HSPs)
scaffold0011 (3-69)||(173493-173559)
[»] scaffold0129 (1 HSPs)
scaffold0129 (132-240)||(45278-45386)
[»] scaffold0610 (1 HSPs)
scaffold0610 (26-143)||(6540-6653)
[»] scaffold0222 (1 HSPs)
scaffold0222 (132-193)||(16811-16872)
[»] scaffold0053 (1 HSPs)
scaffold0053 (12-162)||(78977-79125)
[»] scaffold0146 (2 HSPs)
scaffold0146 (19-69)||(13743-13793)
scaffold0146 (132-193)||(13623-13684)
[»] scaffold0019 (3 HSPs)
scaffold0019 (15-69)||(34553-34607)
scaffold0019 (132-184)||(135473-135525)
scaffold0019 (16-69)||(13695-13747)
[»] scaffold0461 (1 HSPs)
scaffold0461 (132-193)||(11-72)
[»] scaffold0020 (1 HSPs)
scaffold0020 (132-193)||(101931-101992)
[»] scaffold0310 (1 HSPs)
scaffold0310 (132-184)||(17643-17695)
[»] scaffold0107 (2 HSPs)
scaffold0107 (132-184)||(40535-40587)
scaffold0107 (24-68)||(40439-40483)
[»] scaffold0235 (1 HSPs)
scaffold0235 (132-182)||(22596-22646)
[»] scaffold0124 (2 HSPs)
scaffold0124 (132-184)||(34279-34331)
scaffold0124 (19-69)||(34169-34220)
[»] scaffold0706 (1 HSPs)
scaffold0706 (26-69)||(2422-2465)
[»] scaffold0138 (1 HSPs)
scaffold0138 (132-185)||(12296-12349)
[»] scaffold0317 (1 HSPs)
scaffold0317 (132-192)||(1378-1438)
[»] scaffold0139 (2 HSPs)
scaffold0139 (132-184)||(15000-15052)
scaffold0139 (12-69)||(1957-2014)
[»] scaffold0634 (1 HSPs)
scaffold0634 (288-327)||(3519-3558)
[»] scaffold0506 (1 HSPs)
scaffold0506 (27-69)||(9294-9336)
[»] scaffold0490 (1 HSPs)
scaffold0490 (16-69)||(5982-6034)
[»] scaffold0180 (1 HSPs)
scaffold0180 (16-69)||(13511-13563)
[»] scaffold0096 (1 HSPs)
scaffold0096 (132-185)||(39510-39563)
[»] scaffold0815 (1 HSPs)
scaffold0815 (132-180)||(1453-1501)
[»] scaffold0266 (2 HSPs)
scaffold0266 (13-69)||(24081-24136)
scaffold0266 (13-69)||(13526-13581)
[»] scaffold1318 (1 HSPs)
scaffold1318 (132-183)||(1916-1967)
[»] scaffold0348 (2 HSPs)
scaffold0348 (132-183)||(9336-9387)
scaffold0348 (3-68)||(14540-14605)
[»] scaffold0127 (1 HSPs)
scaffold0127 (132-183)||(10239-10290)
[»] scaffold0023 (1 HSPs)
scaffold0023 (132-183)||(135438-135489)
[»] scaffold0015 (1 HSPs)
scaffold0015 (26-69)||(170868-170911)
[»] scaffold0001 (1 HSPs)
scaffold0001 (132-183)||(493032-493082)
[»] scaffold2054 (1 HSPs)
scaffold2054 (124-217)||(680-774)
[»] scaffold0609 (1 HSPs)
scaffold0609 (132-193)||(5861-5922)
[»] scaffold0583 (1 HSPs)
scaffold0583 (16-69)||(5511-5563)
[»] scaffold0335 (1 HSPs)
scaffold0335 (132-185)||(2631-2684)
[»] scaffold0309 (1 HSPs)
scaffold0309 (16-69)||(9237-9289)
[»] scaffold0046 (1 HSPs)
scaffold0046 (16-69)||(71643-71695)
[»] scaffold0669 (1 HSPs)
scaffold0669 (14-69)||(795-850)
[»] scaffold0178 (1 HSPs)
scaffold0178 (14-69)||(26518-26573)


Alignment Details
Target: chr7 (Bit Score: 242; Significance: 1e-134; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 3 - 327
Target Start/End: Complemental strand, 18873539 - 18873217
Alignment:
Q  3 aggagaagcaaaggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaaggtcgagtgagatgaacaagtatagtcagagaatc 102  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||  |||  ||| ||||||||||||||||||||||    
T  18873539 aggaaaagaaaaggtcagaagcagttttacgtgaaacaagttttgggagagaaaaccaagaaaaagggggag--agaagaacaagtatagtcagagaatc 18873442  T
Q  103 tggtcgttgtgcgtttcttctaaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagtttt 202  Q
     || |||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  18873441 cggccgttgtgcgtttcttctaaaactaaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt 18873342  T
Q  203 ggaaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaactt 302  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  18873341 ggaagataaattgagggttagggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaactt 18873242  T
Q  303 aatctttgttgctgctgtgatcata 327  Q
    |||||||||||||||||||||||||    
T  18873241 aatctttgttgctgctgtgatcata 18873217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 132 - 327
Target Start/End: Complemental strand, 15168227 - 15168032
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 231  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||    
T  15168227 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttgat 15168128  T
Q  232 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 327  Q
    ||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15168127 gatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 15168032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 12 - 327
Target Start/End: Complemental strand, 14423154 - 14422841
Alignment:
Q  12 aaaggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaaggtcgagtgagatgaacaagtatagtcagagaatctggtcgttg 111  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    ||| || ||||||||  |||||||||||| | | ||||    
T  14423154 aaaggtcagaagcagttttacgtgaaacaagttttgggagagaaaatcaagaacaagg----gtgggaagaacaagtggagtcagagaatccgattgttg 14423059  T
Q  112 tgcgtttcttcta--aaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaa 208  Q
    ||  ||| |||    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |    
T  14423058 tgtttttgttcatctaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaaga 14422959  T
Q  209 taaattgagggttagggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctt 308  Q
    |||||||||||||||||||| ||||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||| ||||||||||||||||||     
T  14422958 taaattgagggttagggtttgatgatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatcta 14422860  T
Q  309 tgttgctgctgtgatcata 327  Q
    | ||| || ||||||||||    
T  14422859 tattgttgttgtgatcata 14422841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 133 - 327
Target Start/End: Original strand, 10895795 - 10895989
Alignment:
Q  133 gtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagtttt-ggaaaataaattgagggttagggtttaat 231  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||| |||||||| |||||||||||| ||    
T  10895795 gtaagggtgagactatctctcaataatcataatctataatttttgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtttgat 10895894  T
Q  232 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 327  Q
    ||||||||||| |||||| ||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10895895 gatgattctgaggggaat-gggtattgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 10895989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 124 - 324
Target Start/End: Original strand, 12709839 - 12710038
Alignment:
Q  124 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 223  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  12709839 aaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 12709937  T
Q  224 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattc-ccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 322  Q
    ||||| ||||||||| ||||| ||| |||||||||||| |||||||||   |||||||||||||||||||||  |||||||||| |||||| ||||||||    
T  12709938 ggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatc-ttgttgttgctgtga 12710036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 124 - 324
Target Start/End: Original strand, 13122910 - 13123109
Alignment:
Q  124 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 223  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  13122910 aaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 13123008  T
Q  224 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattc-ccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 322  Q
    ||||| ||||||||| ||||| ||| |||||||||||| |||||||||   |||||||||||||||||||||  |||||||||| |||||| ||||||||    
T  13123009 ggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatc-ttgttgttgctgtga 13123107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 124 - 327
Target Start/End: Complemental strand, 13743768 - 13743566
Alignment:
Q  124 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 223  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  13743768 aaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 13743670  T
Q  224 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 323  Q
    ||||| ||||||||| ||||| ||| |||||||||||| ||||||||  |||||| |||  |||||||| |||| ||||||||| ||||  |||||||||    
T  13743669 ggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattttcttgtattatgctgttcagattgaagacttaatctatgttattgctgtgat 13743570  T
Q  324 cata 327  Q
    ||||    
T  13743569 cata 13743566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 132 - 307
Target Start/End: Complemental strand, 16009628 - 16009454
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||| |||||| ||||| ||    
T  16009628 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatggttttggaagataaattgtgggttaaggtttgat 16009529  T
Q  232 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 307  Q
    ||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||| ||||||||||||||||||    
T  16009528 gatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatct 16009454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 124 - 320
Target Start/End: Original strand, 12590639 - 12590832
Alignment:
Q  124 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 223  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||  |||||    
T  12590639 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataatatgaaagttag 12590737  T
Q  224 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgt 320  Q
    ||||| ||||||||||||| ||  | || |||| |||  ||||| ||  |||| ||| ||||||| ||||||||| |||||||  ||||| ||||||    
T  12590738 ggtttgatgatgattctgatgg--aatgagtaaagatgatgttagttttcttggaatttaatgttaagaatgaaagcttaatccatgttgttgctgt 12590832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 124 - 242
Target Start/End: Complemental strand, 13007491 - 13007374
Alignment:
Q  124 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 223  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||  |||||    
T  13007491 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttag 13007393  T
Q  224 ggtttaatgatgattctga 242  Q
    ||||| |||||||||||||    
T  13007392 ggtttgatgatgattctga 13007374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 132 - 297
Target Start/End: Complemental strand, 16677347 - 16677180
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaat-aaattgagggttagggttta 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||| || ||||| |||||||||||||     
T  16677347 ggtaagggtgagactatctctcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaaattaagggttagggtttg 16677248  T
Q  230 atgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaa 297  Q
    ||||||||| ||| | | || | ||||||||| |||||| |   ||||||  | ||||||||||||||    
T  16677247 atgatgattttgaggaggatggtgtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaa 16677180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 132 - 297
Target Start/End: Complemental strand, 17651583 - 17651416
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaat-aaattgagggttagggttta 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||| || ||||| |||||||||||||     
T  17651583 ggtaagggtgagactatctctcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaaattaagggttagggtttg 17651484  T
Q  230 atgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaa 297  Q
    ||||||||| ||| | | || | ||||||||| |||||| |   ||||||  | ||||||||||||||    
T  17651483 atgatgattttgaggaggatggtgtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaa 17651416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 19617540 - 19617474
Alignment:
Q  3 aggagaagcaaaggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  19617540 aggaaaagaaaaggtcagaagcagttttacgtgaaacaagttttgggagagaaaaccaagaacaagg 19617474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 14113503 - 14113446
Alignment:
Q  12 aaaggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  14113503 aaaggtcagaagcagttttacgtgaaacaagttttgggagagaaaatcaagaacaagg 14113446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 11382874 - 11382926
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 184  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11382874 ggtaagggtgagactatctctcaataatcataatatataatttctgaaaattg 11382926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 11389351 - 11389403
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 184  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11389351 ggtaagggtgagactatctctcaataatcataatatataatttctgaaaattg 11389403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 20311055 - 20311107
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 184  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  20311055 ggtaagggtgagactatctctcaataatcataacgtataatttctgaaaattg 20311107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 21230963 - 21231015
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 184  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  21230963 ggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 21231015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 11304352 - 11304303
Alignment:
Q  13 aaggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaag 62  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  11304352 aaggttagaagcagttttacgtgaaacaagttttgggagagaaaaccaag 11304303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 23664012 - 23664061
Alignment:
Q  13 aaggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaag 62  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  23664012 aaggttagaagcagttttacgtgaaacaagttttgggagagaaaaccaag 23664061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 29797714 - 29797665
Alignment:
Q  13 aaggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaag 62  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  29797714 aaggttagaagcagttttacgtgaaacaagttttgggagagaaaaccaag 29797665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 29801533 - 29801484
Alignment:
Q  13 aaggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaag 62  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  29801533 aaggttagaagcagttttacgtgaaacaagttttgggagagaaaaccaag 29801484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 4281281 - 4281229
Alignment:
Q  18 cagaagcagtttt-acgtgaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||||| ||||    
T  4281281 cagaagcagtttttacgtgaaacaagttttgggagagaaaaccaagaataagg 4281229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 132 - 192
Target Start/End: Complemental strand, 13679545 - 13679485
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaatt 192  Q
    ||||||||||||||||||| ||||| ||||| || |||||||| |||||||||| ||||||    
T  13679545 ggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaattgatctaatt 13679485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 36305145 - 36305187
Alignment:
Q  27 ttttacgtgaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    ||||||||||||||||||||||| |||||||||||||| ||||    
T  36305145 ttttacgtgaaacaagttttgggagagaaaaccaagaataagg 36305187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 41780943 - 41780995
Alignment:
Q  16 gtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    |||||||||||||| |||| |||||||||||||| || ||||||||||||||||    
T  41780943 gtcagaagcagtttcacgtaaaacaagttttgggaga-aaaaccaagaacaagg 41780995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 19152985 - 19152934
Alignment:
Q  16 gtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaag 68  Q
    |||||||||||||| |||| |||||||||||||| || |||||||||||||||    
T  19152985 gtcagaagcagtttcacgtaaaacaagttttgggaga-aaaaccaagaacaag 19152934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 20752384 - 20752333
Alignment:
Q  16 gtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaag 68  Q
    |||||||||||||| |||| |||||||||||||| || |||||||||||||||    
T  20752384 gtcagaagcagtttcacgtaaaacaagttttgggaga-aaaaccaagaacaag 20752333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 132 - 183
Target Start/End: Complemental strand, 2971305 - 2971254
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 183  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  2971305 ggtaagggtgggattatctttcaatagtcataatttataatttctgaaaatt 2971254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 132 - 183
Target Start/End: Complemental strand, 11311110 - 11311059
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 183  Q
    |||||||||||||||||||||||||||| ||| | || ||||||| ||||||    
T  11311110 ggtaagggtgagactatctctcaataataatagtgtagaatttctaaaaatt 11311059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 132 - 183
Target Start/End: Original strand, 20906465 - 20906516
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 183  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  20906465 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20906516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 185
Target Start/End: Complemental strand, 46626012 - 46625961
Alignment:
Q  134 taagggtgagactatctctcaataatcataatctataatttctgaaaattga 185  Q
    |||||||||||||| |||||||| || ||||| ||||||||| |||||||||    
T  46626012 taagggtgagactaactctcaatgattataatatataatttcggaaaattga 46625961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 831629 - 831669
Alignment:
Q  124 aaaactatggtaagggtgagactatctctcaataatcataa 164  Q
    ||||||| |||||||||||||||| ||||||||||| ||||    
T  831629 aaaactaaggtaagggtgagactaactctcaataattataa 831669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 1196809 - 1196849
Alignment:
Q  124 aaaactatggtaagggtgagactatctctcaataatcataa 164  Q
    ||||||| |||||||||||||||| ||||||||||| ||||    
T  1196809 aaaactaaggtaagggtgagactaactctcaataattataa 1196849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 164
Target Start/End: Complemental strand, 34958618 - 34958578
Alignment:
Q  124 aaaactatggtaagggtgagactatctctcaataatcataa 164  Q
    ||||||| |||||||||||||||| ||||||||||| ||||    
T  34958618 aaaactaaggtaagggtgagactaactctcaataattataa 34958578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 238; Significance: 1e-131; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 3 - 327
Target Start/End: Complemental strand, 22751320 - 22750998
Alignment:
Q  3 aggagaagcaaaggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaaggtcgagtgagatgaacaagtatagtcagagaatc 102  Q
    |||| ||| ||| ||||||||||||||||||||||||||||||| || ||||||||||| |||||||  |||  ||| ||||||||||||||||||||||    
T  22751320 aggaaaagaaaaagtcagaagcagttttacgtgaaacaagttttaggagagaaaaccaataacaagggggag--agaagaacaagtatagtcagagaatc 22751223  T
Q  103 tggtcgttgtgcgtttcttctaaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagtttt 202  Q
     ||||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  22751222 cggtcgttgtgcgtttcttctaaaactaaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt 22751123  T
Q  203 ggaaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaactt 302  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  22751122 ggaagataaattgagggttagggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaactt 22751023  T
Q  303 aatctttgttgctgctgtgatcata 327  Q
    |||||||||||||||||||||||||    
T  22751022 aatctttgttgctgctgtgatcata 22750998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 3 - 307
Target Start/End: Original strand, 28369930 - 28370232
Alignment:
Q  3 aggagaagcaaaggtcagaagcagttttacgtgaaacaagttttgggggagaaaa-ccaagaacaaggtcgagtgagatgaacaagtatagtca-gagaa 100  Q
    |||| ||| |||||| ||||||||||||||||||||||||||||||| ||||||| ||||| ||||||    | |||| || |||||| || || | |||    
T  28369930 aggaaaagaaaaggttagaagcagttttacgtgaaacaagttttgggagagaaaaaccaaggacaagg----gagagaagagcaagtagagccaagggaa 28370025  T
Q  101 tctggtcgttgtgcgttt--cttctaaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag 198  Q
    |||| ||||||||| |||  ||||| ||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  28370026 tctgatcgttgtgcatttttcttctgaat-taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatag 28370124  T
Q  199 ttttggaaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaa 298  Q
    |||||||||||||||||||||||||||||| ||||||||| ||| ||||| |||||| ||||| |||||||||  ||||||  ||||||| |||||||||    
T  28370125 ttttggaaaataaattgagggttagggtttgatgatgattttgaggggaa-tgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaa 28370223  T
Q  299 acttaatct 307  Q
    |||||||||    
T  28370224 acttaatct 28370232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 3 - 307
Target Start/End: Complemental strand, 19512565 - 19512263
Alignment:
Q  3 aggagaagcaaaggtcagaagcagttttacgtgaaacaagttttgggggagaaaa-ccaagaacaaggtcgagtgagatgaacaagtatagtca-gagaa 100  Q
    |||| ||| |||||| ||||||||||||||||||||||||||||||| ||||||| ||||| ||||||    | |||| || |||||| || || | |||    
T  19512565 aggaaaagaaaaggttagaagcagttttacgtgaaacaagttttgggagagaaaaaccaaggacaagg----gagagaagagcaagtagagccaagggaa 19512470  T
Q  101 tctggtcgttgtgcgttt-cttctaaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag- 198  Q
    |||| ||||||||| ||| ||||| ||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||     
T  19512469 tctgatcgttgtgcattttcttctgaat-taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagt 19512371  T
Q  199 ttttggaaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaa 298  Q
    |||||||| ||||||||||||||||||||| ||||||||| ||| ||||| |||||| ||||| |||||||||  ||||||  ||||||| |||||||||    
T  19512370 ttttggaagataaattgagggttagggtttgatgatgattttgaggggaa-tgggtattgatcatgttaattctattgtaacgtaatgtttagaatgaaa 19512272  T
Q  299 acttaatct 307  Q
    |||||||||    
T  19512271 acttaatct 19512263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 124 - 307
Target Start/End: Original strand, 38144532 - 38144714
Alignment:
Q  124 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 223  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  38144532 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttag 38144631  T
Q  224 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 307  Q
    ||||| ||||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||| ||||||||||||||||||    
T  38144632 ggtttgatgatgattctgaggggaa-tgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 38144714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 119 - 242
Target Start/End: Complemental strand, 23528695 - 23528573
Alignment:
Q  119 cttctaaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagg 218  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||      
T  23528695 cttctaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaa 23528597  T
Q  219 gttagggtttaatgatgattctga 242  Q
    |||||||||| |||||||||||||    
T  23528596 gttagggtttgatgatgattctga 23528573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 2 - 193
Target Start/End: Original strand, 23111075 - 23111264
Alignment:
Q  2 gaggagaagcaaaggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaaggtcgagtgagatgaacaagtatagtcagagaat 101  Q
    ||||| ||| ||||||||||||||||||||||||||||||| |||||| ||||||| |||||||||||    ||| || ||||||||  |||||||||||    
T  23111075 gaggaaaagaaaaggtcagaagcagttttacgtgaaacaaggtttgggagagaaaatcaagaacaagg----gtgggaagaacaagtggagtcagagaat 23111170  T
Q  102 ctggtcgttgtgcgtttcttcta--aaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 193  Q
    | | | ||||||| ||| |||    ||| || |||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  23111171 ccgattgttgtgcttttgttcatctaaattaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23111264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 132 - 193
Target Start/End: Original strand, 18407947 - 18408008
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 193  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  18407947 ggtaagggtgagactatctctcaataatcataatatataatttctgaaaattgatctaattg 18408008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 22438751 - 22438803
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 184  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22438751 ggtaagggtgagactatctctcaataatcataatgtataatttctgaaaattg 22438803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 22006766 - 22006832
Alignment:
Q  3 aggagaagcaaaggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    |||| ||| |||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  22006766 aggaaaagaaaaggtgagaagcagttttacgtaaaacaagttttgggagagaaaaccaagaacaagg 22006832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 22337697 - 22337647
Alignment:
Q  12 aaaggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaag 62  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  22337697 aaaggtcagaagcagttttacgtgaaacaagttttgggagagaaaaccaag 22337647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 22341235 - 22341185
Alignment:
Q  12 aaaggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaag 62  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  22341235 aaaggtcagaagcagttttacgtgaaacaagttttgggagagaaaaccaag 22341185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 9777268 - 9777219
Alignment:
Q  13 aaggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaag 62  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  9777268 aaggtgagaagcagttttacgtgaaacaagttttgggagagaaaaccaag 9777219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 23528809 - 23528756
Alignment:
Q  16 gtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    |||||||||||||||||||||||| |||||| || |||||||||||||||||||    
T  23528809 gtcagaagcagttttacgtgaaaccagttttaggagagaaaaccaagaacaagg 23528756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 37803960 - 37804018
Alignment:
Q  12 aaaggtcagaagcagttttacgtgaaacaagttttgggggag-aaaaccaagaacaagg 69  Q
    |||||| ||||||||||||||||||||||||||||||| ||| ||||||||| ||||||    
T  37803960 aaaggttagaagcagttttacgtgaaacaagttttgggagagaaaaaccaaggacaagg 37804018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 38144412 - 38144466
Alignment:
Q  3 aggagaagcaaaggtcagaagcagttttacgtgaaacaagttttgggggagaaaa 57  Q
    |||| ||| |||||||| ||||||||||||||||||||||||||||| |||||||    
T  38144412 aggaaaagaaaaggtcaaaagcagttttacgtgaaacaagttttgggagagaaaa 38144466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 132 - 183
Target Start/End: Complemental strand, 19236951 - 19236900
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 183  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  19236951 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 19236900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 21900899 - 21900951
Alignment:
Q  16 gtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    |||||||| ||||| |||| |||||||||||||| || ||||||||||||||||    
T  21900899 gtcagaagtagtttcacgtaaaacaagttttgggaga-aaaaccaagaacaagg 21900951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 22461207 - 22461158
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 181  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||    
T  22461207 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 22461158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 22467831 - 22467782
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 181  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||    
T  22467831 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 22467782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 169; Significance: 2e-90; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 124 - 327
Target Start/End: Complemental strand, 111942 - 111738
Alignment:
Q  124 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaa-ttgacctaattgcttagttttggaaaataaattgagggtta 222  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||    
T  111942 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaaattgacctaattgcatagttttggaagataaattgagggtta 111843  T
Q  223 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 322  Q
    |||||| ||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  111842 gggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 111743  T
Q  323 tcata 327  Q
    |||||    
T  111742 tcata 111738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 168; Significance: 6e-90; HSPs: 5)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 124 - 327
Target Start/End: Original strand, 11846 - 12049
Alignment:
Q  124 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 223  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  11846 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagagttag 11945  T
Q  224 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 323  Q
    ||||| ||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  11946 ggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatcttcagaatgaaaacttaatctttgttgttgctgtgat 12045  T
Q  324 cata 327  Q
    ||||    
T  12046 cata 12049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 132 - 307
Target Start/End: Complemental strand, 111737 - 111563
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  111737 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtttgat 111638  T
Q  232 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 307  Q
    ||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||| ||||||||||||||||||    
T  111637 gatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatct 111563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 67346 - 67304
Alignment:
Q  27 ttttacgtgaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  67346 ttttacgtgaaacaagttttgggggagaaaaccaagaacaagg 67304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 26 - 69
Target Start/End: Original strand, 121323 - 121366
Alignment:
Q  26 gttttacgtgaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  121323 gttttacgtgaaacaagttttgggagagaaaaccaagaacaagg 121366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 143800 - 143748
Alignment:
Q  16 gtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    |||||||||||||| || | |||||||||||||| || ||||||||||||||||    
T  143800 gtcagaagcagtttcacataaaacaagttttgggaga-aaaaccaagaacaagg 143748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 168; Significance: 6e-90; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 132 - 327
Target Start/End: Original strand, 14762761 - 14762956
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 231  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||    
T  14762761 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttgat 14762860  T
Q  232 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 327  Q
    ||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14762861 gatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 14762956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 132 - 327
Target Start/End: Original strand, 20247792 - 20247987
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||    
T  20247792 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttgat 20247891  T
Q  232 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 327  Q
    ||||||||||||||||| |||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20247892 gatgattctgaagggaaatgggtaatgatcatgttaattttcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 20247987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 132 - 327
Target Start/End: Original strand, 38310803 - 38310998
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 231  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||| ||    
T  38310803 ggtaagggtgagactatctctcgataatcataatctataatttctgaatattgacctaattgcatagttttggaagataaattgagggttagggtttgat 38310902  T
Q  232 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 327  Q
    ||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38310903 gatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 38310998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 3 - 307
Target Start/End: Complemental strand, 9534507 - 9534205
Alignment:
Q  3 aggagaagcaaaggtcagaagcagttttacgtgaaacaagttttgggggagaaaa-ccaagaacaaggtcgagtgagatgaacaagtatagtca-gagaa 100  Q
    |||| ||| |||||| ||||||||||||||||||||||||||||||| | ||||| ||||| ||||||    | |||| || |||||| || || | |||    
T  9534507 aggaaaagaaaaggttagaagcagttttacgtgaaacaagttttgggagggaaaaaccaaggacaagg----gagagaagagcaagtagagccaagggaa 9534412  T
Q  101 tctggtcgttgtgcgttt--cttctaaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag 198  Q
    || | ||||||||| |||  ||||| ||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  9534411 tccgatcgttgtgcatttttcttctgaat-taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatag 9534313  T
Q  199 ttttggaaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaa 298  Q
    |||||||||||||||||||||||||||||| |||||||||||||  |||| |||||| ||||| |||||||||  ||||||| ||||||| |||||||||    
T  9534312 ttttggaaaataaattgagggttagggtttgatgatgattctgagtggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaa 9534214  T
Q  299 acttaatct 307  Q
    |||||||||    
T  9534213 acttaatct 9534205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 132 - 322
Target Start/End: Complemental strand, 24193008 - 24192817
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagtttt-ggaaaataaattgagggttagggtttaa 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||| |    
T  24193008 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttga 24192909  T
Q  231 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 322  Q
    |||||||||||||||||| |||||||||||| |||||||||  ||||||| | |||||||||||||||||||||||| || || ||||||||    
T  24192908 tgatgattctgaagggaaatgggtaatgatcatgttaattctgttgtaatgtgatgttcagaatgaaaacttaatctatgctgttgctgtga 24192817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 132 - 307
Target Start/End: Original strand, 23370509 - 23370684
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttagggtttaa 230  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||| |||||||||||| |    
T  23370509 ggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtttga 23370608  T
Q  231 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 307  Q
    |||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||| ||||||||||||||||||    
T  23370609 tgatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatct 23370684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 132 - 242
Target Start/End: Original strand, 24933832 - 24933941
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 231  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||   ||||||||| ||    
T  24933832 ggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataatatgaaaattagggtttgat 24933930  T
Q  232 gatgattctga 242  Q
    |||||||||||    
T  24933931 gatgattctga 24933941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 124 - 210
Target Start/End: Original strand, 41455093 - 41455178
Alignment:
Q  124 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaata 210  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||    
T  41455093 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaata 41455178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 124 - 268
Target Start/End: Original strand, 16801463 - 16801606
Alignment:
Q  124 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaat-aaattgagggtta 222  Q
    ||||||| ||||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||| ||| ||| || ||||||| |||||    
T  16801463 aaaactaaggtaagggtgagactatctctcaataatcat-atatataatttctgaaaattgacctgattgcttagcttttgaagataaaattgaaggtta 16801561  T
Q  223 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaa 268  Q
    ||| || ||||||||| ||| | |||| | ||||||||| ||||||    
T  16801562 ggg-ttgatgatgattttgaggagaatggtgtaatgatcatgttaa 16801606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 132 - 307
Target Start/End: Original strand, 55499105 - 55499281
Alignment:
Q  132 ggtaagggtgagactatctctcaataatc-ataatctataatttctg-aaaattgacctaattgcttagttttggaaaataaattgagggttagggttta 229  Q
    ||||||||||||||||||||||| ||||  ||||| | ||||||| | ||||||||||||| ||||||   |||   |  |||||||||||||||||||     
T  55499105 ggtaagggtgagactatctctcattaatagataatatgtaatttcgggaaaattgacctaactgcttaaccttgaggataaaattgagggttagggtttg 55499204  T
Q  230 atgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 307  Q
    ||||||||||||| ||||| |||||||||||| ||||||||   ||||||| | |||||| |||||||| ||||||||    
T  55499205 atgatgattctgaggggaa-tgggtaatgatcatgttaattatgttgtaatgtgatgttcggaatgaaatcttaatct 55499281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 14085776 - 14085710
Alignment:
Q  3 aggagaagcaaaggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  14085776 aggaaaagaaaaggtcagaagcagttttacgtgaaacaagttttgggagagaaaaccaagaacaagg 14085710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 49400776 - 49400710
Alignment:
Q  3 aggagaagcaaaggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  49400776 aggaaaagaaaaggtcagaagcagttttacgtgaaacaagttttgggagagaaaaccaagaacaagg 49400710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 14091177 - 14091111
Alignment:
Q  3 aggagaagcaaaggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    |||| ||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  14091177 aggaaaagaaaaggtcagaagtagttttacgtgaaacaagttttgggagagaaaaccaagaacaagg 14091111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 8579131 - 8579186
Alignment:
Q  12 aaaggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaa 67  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  8579131 aaaggtcagaagcagttttacgtcaaacaagttttgggagagaaaaccaagaacaa 8579186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 16801206 - 16801147
Alignment:
Q  3 aggagaagcaaaggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaag 62  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  16801206 aggaaaagaaaaggtcagaagcagttttacgtgaaacaagttttgggagagaaaaccaag 16801147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 20247666 - 20247725
Alignment:
Q  3 aggagaagcaaaggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaag 62  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  20247666 aggaaaagaaaaggtcagaagcagttttacgtgaaacaagttttgggagagaaaaccaag 20247725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 17240407 - 17240457
Alignment:
Q  19 agaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  17240407 agaagcagttttacgtgaaacaagttttgggagagaaaaccaagaacaagg 17240457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 132 - 190
Target Start/End: Complemental strand, 18929297 - 18929239
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaa 190  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||    
T  18929297 ggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatctaa 18929239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 132 - 193
Target Start/End: Original strand, 17240516 - 17240577
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 193  Q
    ||||||||||||||||||||||||||||| ||||  |||||||||||||||||| |||||||    
T  17240516 ggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 17240577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 54521935 - 54521876
Alignment:
Q  3 aggagaagcaaaggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaag 62  Q
    |||| ||| |||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  54521935 aggaaaagaaaaggttagaagcagttttacgtgaaacaagttttgggagagaaaaccaag 54521876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 62
Target Start/End: Original strand, 38310689 - 38310736
Alignment:
Q  15 ggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaag 62  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  38310689 ggtcagaagcagttttacgtgaaacaaattttgggagagaaaaccaag 38310736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 24193136 - 24193082
Alignment:
Q  3 aggagaagcaaaggtcagaagcagttttacgtgaaacaagttttgggggagaaaa 57  Q
    |||| ||| |||||| ||||||||||||||||||||||||||||||| |||||||    
T  24193136 aggaaaagaaaaggttagaagcagttttacgtgaaacaagttttgggagagaaaa 24193082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 132 - 183
Target Start/End: Original strand, 13302244 - 13302295
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 183  Q
    ||||||||||||| ||||| |||||||||||||| | |||||||||||||||    
T  13302244 ggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 13302295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 132 - 183
Target Start/End: Original strand, 13323791 - 13323842
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 183  Q
    ||||||||||||| ||||| |||||||||||||| | |||||||||||||||    
T  13323791 ggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 13323842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 31689679 - 31689721
Alignment:
Q  27 ttttacgtgaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    |||||||||||| |||||||||| |||||||||||||||||||    
T  31689679 ttttacgtgaaataagttttgggagagaaaaccaagaacaagg 31689721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 31944547 - 31944505
Alignment:
Q  27 ttttacgtgaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    ||||| ||||||||||||||||| |||||||||||||||||||    
T  31944547 ttttaggtgaaacaagttttgggagagaaaaccaagaacaagg 31944505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 132 - 183
Target Start/End: Original strand, 12033448 - 12033499
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 183  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  12033448 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 12033499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 132 - 183
Target Start/End: Original strand, 13312900 - 13312951
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 183  Q
    ||||||||||||| ||||| |||||||||||||| | |||||| ||||||||    
T  13312900 ggtaagggtgagattatctttcaataatcataatatgtaatttttgaaaatt 13312951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 132 - 183
Target Start/End: Complemental strand, 17131783 - 17131732
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 183  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  17131783 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 17131732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 132 - 183
Target Start/End: Complemental strand, 51301640 - 51301589
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 183  Q
    ||||||||||||| |||||  ||||||||||||| | |||||||||||||||    
T  51301640 ggtaagggtgagattatcttccaataatcataatatgtaatttctgaaaatt 51301589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 242
Target Start/End: Original strand, 10389447 - 10389557
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 231  Q
    |||||||||| || ||||| ||||| || ||||| ||||||||||||||| | | |||||||  |||||||  | |||||  |||   ||||||||| ||    
T  10389447 ggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggtttgat 10389546  T
Q  232 gatgattctga 242  Q
    |||||||||||    
T  10389547 gatgattctga 10389557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 242
Target Start/End: Original strand, 10414536 - 10414646
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 231  Q
    |||||||||| || ||||| ||||| || ||||| ||||||||||||||| | | |||||||  |||||||  | |||||  |||   ||||||||| ||    
T  10414536 ggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggtttgat 10414635  T
Q  232 gatgattctga 242  Q
    |||||||||||    
T  10414636 gatgattctga 10414646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 242
Target Start/End: Original strand, 10421206 - 10421316
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 231  Q
    |||||||||| || ||||| ||||| || ||||| ||||||||||||||| | | |||||||  |||||||  | |||||  |||   ||||||||| ||    
T  10421206 ggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggtttgat 10421305  T
Q  232 gatgattctga 242  Q
    |||||||||||    
T  10421306 gatgattctga 10421316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 14288082 - 14288131
Alignment:
Q  19 agaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    ||||||||||| |||| |||||||||||||| || ||||||||||||||||    
T  14288082 agaagcagtttcacgtaaaacaagttttgggaga-aaaaccaagaacaagg 14288131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 11849482 - 11849527
Alignment:
Q  3 aggagaagcaaaggtcagaagcagttttacgtgaaacaagttttgg 48  Q
    |||| ||| ||||||||||||||||| ||||| |||||||||||||    
T  11849482 aggaaaagaaaaggtcagaagcagttgtacgtaaaacaagttttgg 11849527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 13666972 - 13667017
Alignment:
Q  3 aggagaagcaaaggtcagaagcagttttacgtgaaacaagttttgg 48  Q
    |||| ||| ||||||||||||||||| ||||| |||||||||||||    
T  13666972 aggaaaagaaaaggtcagaagcagttgtacgtaaaacaagttttgg 13667017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 185
Target Start/End: Complemental strand, 16801080 - 16801027
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 185  Q
    |||||||||||||||| |||||||| ||  |||| ||||| |||||||||||||    
T  16801080 ggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattga 16801027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 35985820 - 35985768
Alignment:
Q  16 gtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    ||||||| |||||| |||| |||||||||||||| || ||||||||||||||||    
T  35985820 gtcagaaacagtttcacgtaaaacaagttttgggaga-aaaaccaagaacaagg 35985768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 164; Significance: 2e-87; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 132 - 327
Target Start/End: Complemental strand, 23057990 - 23057795
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 231  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||    
T  23057990 ggtaagggtgagactatctctcgataatcataatctataattcctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttgat 23057891  T
Q  232 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 327  Q
    ||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23057890 gatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 23057795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 2 - 307
Target Start/End: Complemental strand, 23839378 - 23839075
Alignment:
Q  2 gaggagaagcaaaggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaaggtcgagtgagatgaacaagtatagtcagagaat 101  Q
    ||||| ||| ||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||    ||| || ||||||||  |||||||||||    
T  23839378 gaggaaaagaaaaggtcagaagcagttttacgtgaaacatgttttgggagagaaaatcaagaacaagg----gtgggaagaacaagtggagtcagagaat 23839283  T
Q  102 ctggtcgttgtgcgtttcttcta--aaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagt 199  Q
    | | | ||||||| ||| |||    ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  23839282 ccgattgttgtgcttttgttcatctaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagt 23839183  T
Q  200 -tttggaaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaa 298  Q
     ||||||| ||||||||||||||||||||| ||||||||||| ||||| | |||||| ||||| |||||||||  ||||||| |||||||||||||||||    
T  23839182 gtttggaagataaattgagggttagggtttgatgatgattct-aaggggaatgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaa 23839084  T
Q  299 acttaatct 307  Q
    |||||||||    
T  23839083 acttaatct 23839075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 124 - 327
Target Start/End: Original strand, 29614142 - 29614345
Alignment:
Q  124 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttgg-aaaataaattgagggtta 222  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||||| ||||||||||||||||||    
T  29614142 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctagttgcataattttggaaaaataaattgagggtta 29614241  T
Q  223 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 322  Q
    |||||| ||||||||| ||||||||| |||||||||||| ||||||||| ||||| ||  |||||| |||||||||||||||||||||||| ||||||||    
T  29614242 gggtttgatgatgattatgaagggaaatgggtaatgatcatgttaattctcttgt-attgaatgtttagaatgaaaacttaatctttgttgttgctgtga 29614340  T
Q  323 tcata 327  Q
    |||||    
T  29614341 tcata 29614345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 124 - 325
Target Start/End: Complemental strand, 18800497 - 18800296
Alignment:
Q  124 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaata-aattgagggtta 222  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  18800497 aaaactaatgtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaatagaattgagggtta 18800398  T
Q  223 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 322  Q
    |||||| |||||||||||| |||||| || ||||||||| |||||||||  ||||||| | ||||||| ||||||| |||||||| | ||| || |||||    
T  18800397 gggtttgatgatgattctggagggaa-tgagtaatgatcatgttaattctgttgtaatgtgatgttcaaaatgaaatcttaatctatattgttgttgtga 18800299  T
Q  323 tca 325  Q
    |||    
T  18800298 tca 18800296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 132 - 327
Target Start/End: Complemental strand, 4477909 - 4477714
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttagggtttaa 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||| |||||||||||| |    
T  4477909 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtttga 4477810  T
Q  231 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 327  Q
    |||||||||||| ||||| |||||| ||||| || ||||||  ||||||| ||||||| |||||||||||||||||| | ||| || ||||||||||    
T  4477809 tgatgattctgaggggaa-tgggtattgatcatgctaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttgttgtgatcata 4477714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 132 - 307
Target Start/End: Original strand, 10986184 - 10986359
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttagggtttaa 230  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||| ||||||||||||||||||||| |    
T  10986184 ggtaagggtgagactatctttcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttga 10986283  T
Q  231 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 307  Q
    |||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||||||||||||||||||||||    
T  10986284 tgatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatct 10986359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 124 - 261
Target Start/End: Original strand, 930091 - 930227
Alignment:
Q  124 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 223  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  |||||||| |||||||||||||||||||    
T  930091 aaaactaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgtatagttttgaaaaataaattgagggttag 930190  T
Q  224 ggtttaatgatgattctgaagggaattgggtaatgatc 261  Q
    ||||| |||||| |||||||||||| ||||||||||||    
T  930191 ggtttgatgatgtttctgaagggaa-tgggtaatgatc 930227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 124 - 242
Target Start/End: Complemental strand, 12168422 - 12168305
Alignment:
Q  124 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 223  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||  |||||    
T  12168422 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttag 12168324  T
Q  224 ggtttaatgatgattctga 242  Q
    ||||| |||||||||||||    
T  12168323 ggtttgatgatgattctga 12168305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 124 - 242
Target Start/End: Complemental strand, 19287331 - 19287214
Alignment:
Q  124 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 223  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||  |||||    
T  19287331 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttag 19287233  T
Q  224 ggtttaatgatgattctga 242  Q
    ||||| |||||||||||||    
T  19287232 ggtttgatgatgattctga 19287214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 124 - 242
Target Start/End: Original strand, 19785865 - 19785982
Alignment:
Q  124 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 223  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||  ||||||||||||||||| |||  |||||    
T  19785865 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctagttgaatagttttggaaaataaaatgaaagttag 19785963  T
Q  224 ggtttaatgatgattctga 242  Q
    ||||| |||||||||||||    
T  19785964 ggtttgatgatgattctga 19785982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 124 - 242
Target Start/End: Complemental strand, 19878515 - 19878398
Alignment:
Q  124 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 223  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||  |||||    
T  19878515 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttag 19878417  T
Q  224 ggtttaatgatgattctga 242  Q
    ||||| |||||||||||||    
T  19878416 ggtttgatgatgattctga 19878398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 124 - 242
Target Start/End: Complemental strand, 19884291 - 19884174
Alignment:
Q  124 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 223  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||  |||||    
T  19884291 aaaactaaggttagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttag 19884193  T
Q  224 ggtttaatgatgattctga 242  Q
    ||||| |||||||||||||    
T  19884192 ggtttgatgatgattctga 19884174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 34639990 - 34640069
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataa 211  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  34639990 ggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattgacctaattgaatagttttggaaaataa 34640069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 132 - 327
Target Start/End: Original strand, 21565215 - 21565410
Alignment:
Q  132 ggtaagggtgagactatctctcaataatc-ataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaa 230  Q
    ||||||||||||||||||||||| ||||  ||||| | ||||||| |||||||||||||||||||||   |||   |  ||||||||||||||||||| |    
T  21565215 ggtaagggtgagactatctctcattaatagataatatttaatttcggaaaattgacctaattgcttaaccttgaggataaaattgagggttagggtttga 21565314  T
Q  231 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 327  Q
    |||||||||| ||||| | |||||||||||| ||||||||   ||||||| | | |||| |||||||| |||||||| |  || |||||||||||||    
T  21565315 tgatgattct-aaggggaatgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactgttgctgtgatcata 21565410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 34646664 - 34646743
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataa 211  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  || |||||||||||||    
T  34646664 ggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattgacctaattgaataattttggaaaataa 34646743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 132 - 242
Target Start/End: Original strand, 25469708 - 25469816
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 231  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||  | ||||||||||||||  |||   ||||||||| ||    
T  25469708 ggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttggaaaataatatgaaaattagggtttgat 25469805  T
Q  232 gatgattctga 242  Q
    ||| |||||||    
T  25469806 gataattctga 25469816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 25397343 - 25397172
Alignment:
Q  12 aaaggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaaggtcgagtgagatgaacaagtatag-tcagagaatctggtcgtt 110  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||      | |||| || |||||| || | | |||||| | |||||    
T  25397343 aaaggttagaagcagttttacgtgaaacaagttttgggagagaaaaccaagaacaa----atgagagaagagcaagtagagctaaaagaatccgatcgtt 25397248  T
Q  111 gtgcg--tttcttctaaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 185  Q
    |||||  ||||||||  || || |||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  25397247 gtgcgtttttcttct-gaattaaggtaagggtgaggctaactctcgatgatcataatatataatttctgaaaattga 25397172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 2286644 - 2286703
Alignment:
Q  3 aggagaagcaaaggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaag 62  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  2286644 aggaaaagaaaaggtcagaagcagttttacgtgaaacaagttttgggagagaaaaccaag 2286703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 9187672 - 9187606
Alignment:
Q  3 aggagaagcaaaggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    |||| ||| ||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||    
T  9187672 aggaaaagaaaaggtcagaatcagttttacgtgaaacaagttttgggagagaaaacaaagaacaagg 9187606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 23058112 - 23058055
Alignment:
Q  12 aaaggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    |||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  23058112 aaaggtcacaagcagttttatgtgaaacaagttttgggagagaaaaccaagaacaagg 23058055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 29483308 - 29483367
Alignment:
Q  3 aggagaagcaaaggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaag 62  Q
    |||| ||| |||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  29483308 aggaaaagaaaaggttagaagcagttttacgtgaaacaagttttgggagagaaaaccaag 29483367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 136 - 184
Target Start/End: Original strand, 24512851 - 24512899
Alignment:
Q  136 agggtgagactatctctcaataatcataatctataatttctgaaaattg 184  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||    
T  24512851 agggtgagactatctctcaataatcatagtatataatttctgaaaattg 24512899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 26 - 69
Target Start/End: Original strand, 8767115 - 8767158
Alignment:
Q  26 gttttacgtgaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  8767115 gttttacgtgaaacaagttttgggagagaaaaccaagaacaagg 8767158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 26 - 69
Target Start/End: Original strand, 14615340 - 14615383
Alignment:
Q  26 gttttacgtgaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  14615340 gttttacgtgaaacaagttttgggagagaaaaccaagaacaagg 14615383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 933538 - 933603
Alignment:
Q  3 aggagaagcaaaggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaag 68  Q
    |||| ||| ||||||||||||||||||||||| ||||||||||||| |  ||||| ||||||||||    
T  933538 aggaaaagaaaaggtcagaagcagttttacgtaaaacaagttttggagaggaaaagcaagaacaag 933603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 9187547 - 9187498
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 181  Q
    ||||||||||||||||||||||||||||| ||||  ||||||||||||||    
T  9187547 ggtaagggtgagactatctctcaataatcttaatacataatttctgaaaa 9187498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 185
Target Start/End: Complemental strand, 25348539 - 25348486
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 185  Q
    |||||||||||||||||||||||||||| ||| | || ||||||||||||||||    
T  25348539 ggtaagggtgagactatctctcaataataatagtatagaatttctgaaaattga 25348486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 185
Target Start/End: Complemental strand, 25598696 - 25598643
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 185  Q
    |||||||||||||||| |||||||| |||||||| |||| ||||||||||||||    
T  25598696 ggtaagggtgagactaactctcaatgatcataatatatattttctgaaaattga 25598643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 12943304 - 12943237
Alignment:
Q  3 aggagaagcaaaggtcagaagcagttttacgtgaaacaagttttgggggag-aaaaccaagaacaagg 69  Q
    |||| ||| |||||| |||||||||||||||| |||||||||||||| ||| ||||||||| ||||||    
T  12943304 aggaaaagaaaaggttagaagcagttttacgtaaaacaagttttgggagagaaaaaccaaggacaagg 12943237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 185
Target Start/End: Original strand, 2286770 - 2286823
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 185  Q
    |||||||||||||||| |||||||| ||  |||| ||||| |||||||||||||    
T  2286770 ggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattga 2286823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 185
Target Start/End: Original strand, 19471338 - 19471391
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 185  Q
    |||||||||||| ||| ||||| || |||||||| ||||||||||| |||||||    
T  19471338 ggtaagggtgaggctacctctcgatgatcataatatataatttctggaaattga 19471391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 24512754 - 24512795
Alignment:
Q  27 ttttacgtgaaacaagttttgggggagaaaaccaagaacaag 68  Q
    |||||||||||||||||||||| |  ||||||||||||||||    
T  24512754 ttttacgtgaaacaagttttggagaggaaaaccaagaacaag 24512795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 193
Target Start/End: Complemental strand, 31252474 - 31252413
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 193  Q
    ||||||||||||| ||||| | ||| || ||||| ||||||||||||||||| | |||||||    
T  31252474 ggtaagggtgagattatcttttaatgattataatatataatttctgaaaattaatctaattg 31252413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 148; Significance: 5e-78; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 124 - 327
Target Start/End: Complemental strand, 1237 - 1036
Alignment:
Q  124 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 223  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  1237 aaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 1139  T
Q  224 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 323  Q
    ||||| |||| |||| ||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  1138 ggtttgatgaggattatgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatc-ttgttgttgctgtgat 1040  T
Q  324 cata 327  Q
    ||||    
T  1039 cata 1036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 148; Significance: 5e-78; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 124 - 327
Target Start/End: Complemental strand, 50238 - 50037
Alignment:
Q  124 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 223  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  50238 aaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 50140  T
Q  224 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 323  Q
    ||||| |||| |||| ||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  50139 ggtttgatgaggattatgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatc-ttgttgttgctgtgat 50041  T
Q  324 cata 327  Q
    ||||    
T  50040 cata 50037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 146; Significance: 8e-77; HSPs: 4)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 3 - 211
Target Start/End: Complemental strand, 8255 - 8049
Alignment:
Q  3 aggagaagcaaaggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaaggtcgagtgagatgaacaagtatagtcagagaatc 102  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||  ||| ||||||||| ||||||||||||    
T  8255 aggaaaagaaaaggtcagaagcagttttacgtgaaacaagttttgggagagaaaaccaagaacaagggggag--agaagaacaagtagagtcagagaatc 8158  T
Q  103 tggtcgttgtgcgtttcttctaaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagtttt 202  Q
     ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||    
T  8157 cggtcgttgtgcgtttcttctaaaactaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgcatagtctt 8058  T
Q  203 ggaaaataa 211  Q
    |||| ||||    
T  8057 ggaagataa 8049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 3 - 211
Target Start/End: Complemental strand, 1110 - 904
Alignment:
Q  3 aggagaagcaaaggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaaggtcgagtgagatgaacaagtatagtcagagaatc 102  Q
    |||| ||| |||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||  |||  ||| ||||||||||||||||||||||    
T  1110 aggaaaagaaaaggttagaagtagttttacgtgaaacaagttttgggagagaaaaccaagaacaagggggag--agaagaacaagtatagtcagagaatc 1013  T
Q  103 tggtcgttgtgcgtttcttctaaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagtttt 202  Q
     ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||    
T  1012 cggtcgttgtgcgtttcttctaaaactaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgcatagtctt 913  T
Q  203 ggaaaataa 211  Q
    |||| ||||    
T  912 ggaagataa 904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 899 - 846
Alignment:
Q  274 ttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 327  Q
    ||||||| | |||||||||||||||||||||||| ||||| |||||||||||||    
T  899 ttgtaatgtgatgttcagaatgaaaacttaatctgtgttgttgctgtgatcata 846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 8044 - 7991
Alignment:
Q  274 ttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 327  Q
    ||||||| | |||||||||||||||||||||||| ||||| |||||||||||||    
T  8044 ttgtaatgtgatgttcagaatgaaaacttaatctgtgttgttgctgtgatcata 7991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 143; Significance: 5e-75; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 12 - 307
Target Start/End: Original strand, 20436910 - 20437202
Alignment:
Q  12 aaaggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaaggtcgagtgagatgaacaagtatagtcagagaatctggtcgttg 111  Q
    |||||||| ||||||||||||||||||||||||| ||| ||||||| |||||||||||    ||| || ||||||||  |||||||||||| | | ||||    
T  20436910 aaaggtcataagcagttttacgtgaaacaagttt-gggagagaaaatcaagaacaagg----gtgggaagaacaagtggagtcagagaatccgattgttg 20437004  T
Q  112 tgcgtttcttcta--aaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaa 208  Q
    ||| ||| |||    ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |    
T  20437005 tgcttttgttcatctaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaaga 20437104  T
Q  209 taaattgagggttagggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 307  Q
    |||||||||||||||||||| ||||||||||||| ||||| |||||| ||||| ||||||||   ||||||| ||||||||||||||||||||||||||    
T  20437105 taaattgagggttagggtttgatgatgattctgaggggaa-tgggtattgatcatgttaattatgttgtaatgtaatgttcagaatgaaaacttaatct 20437202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 12 - 193
Target Start/End: Complemental strand, 32651741 - 32651563
Alignment:
Q  12 aaaggtcagaagcagttttacgtgaaa-caagttttgggggagaaaaccaagaacaaggtcgagtgagatgaacaagtatagtcagagaatctggtcgtt 110  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |    |||||| ||||||||  |||||||||||| | |||||    
T  32651741 aaaggtcagaagcagttttacgtgaaaacaagttttgggagagaaaaccaagaacaatg----gtgagaagaacaagtggagtcagagaatccgatcgtt 32651646  T
Q  111 gtgcgttt-cttctaaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 193  Q
    ||| |||| ||||||||  || |||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  32651645 gtgtgttttcttctaaat-taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 32651563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 124 - 242
Target Start/End: Complemental strand, 41112094 - 41111977
Alignment:
Q  124 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 223  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||| |||||||  |||  |||||    
T  41112094 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttgaaaaataagatgaaagttag 41111996  T
Q  224 ggtttaatgatgattctga 242  Q
    ||||| |||||||||||||    
T  41111995 ggtttgatgatgattctga 41111977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 21543301 - 21543235
Alignment:
Q  3 aggagaagcaaaggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  21543301 aggaaaagaaaaggtcagaagcagttttacgtgaaacaagttttgggagagaaaaccaagaacaagg 21543235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 42094838 - 42094903
Alignment:
Q  3 aggagaagcaaaggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaag 68  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  42094838 aggaaaagaaaaggtcagaagcagttttacgtgaaacaagttttgggagagaaaaccaagaacaag 42094903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 132 - 193
Target Start/End: Complemental strand, 18712851 - 18712790
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 193  Q
    |||| ||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  18712851 ggtatgggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 18712790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 20850166 - 20850113
Alignment:
Q  16 gtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    |||||||||||||||| || |||||||||||||| |||||||||||||||||||    
T  20850166 gtcagaagcagttttatgtaaaacaagttttgggagagaaaaccaagaacaagg 20850113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 19663520 - 19663572
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 184  Q
    |||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  19663520 ggtaagggtgagactatctctcgataatcatagtatataatttctgaaaattg 19663572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 26 - 69
Target Start/End: Original strand, 29553504 - 29553547
Alignment:
Q  26 gttttacgtgaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  29553504 gttttacgtgaaacaagttttgggagagaaaaccaagaacaagg 29553547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 185
Target Start/End: Original strand, 10811786 - 10811839
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 185  Q
    |||||||||||||||||||||||||||| ||| | || ||||||||||||||||    
T  10811786 ggtaagggtgagactatctctcaataataatagtgtagaatttctgaaaattga 10811839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 185
Target Start/End: Complemental strand, 20805373 - 20805320
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 185  Q
    |||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  20805373 ggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 20805320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 11158145 - 11158093
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 184  Q
    |||||||||||||||| |||||||| ||| |||| ||||||||||||||||||    
T  11158145 ggtaagggtgagactaactctcaatgatcttaatatataatttctgaaaattg 11158093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 19663410 - 19663461
Alignment:
Q  19 agaagcagttttacgtgaaacaagttttgggggagaa-aaccaagaacaagg 69  Q
    ||||||||||||||||||||||||||||||| || || ||||||||||||||    
T  19663410 agaagcagttttacgtgaaacaagttttgggagaaaagaaccaagaacaagg 19663461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 16373144 - 16373102
Alignment:
Q  3 aggagaagcaaaggtcagaagcagttttacgtgaaacaagttt 45  Q
    |||| ||| ||||||||||||||||||||||||||||||||||    
T  16373144 aggaaaagaaaaggtcagaagcagttttacgtgaaacaagttt 16373102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 19777713 - 19777755
Alignment:
Q  27 ttttacgtgaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    ||||||||||||| ||||||||| |||||||||||||||||||    
T  19777713 ttttacgtgaaactagttttgggagagaaaaccaagaacaagg 19777755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 69
Target Start/End: Complemental strand, 18712954 - 18712910
Alignment:
Q  26 gttttacgtgaaacaagttttgggggagaa-aaccaagaacaagg 69  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||    
T  18712954 gttttacgtgaaacaagttttgggagagaagaaccaagaacaagg 18712910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 132 - 183
Target Start/End: Original strand, 20851136 - 20851187
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 183  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  20851136 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20851187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 132 - 183
Target Start/End: Original strand, 20857763 - 20857814
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 183  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  20857763 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20857814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 132 - 183
Target Start/End: Complemental strand, 21706327 - 21706276
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 183  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  21706327 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 21706276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 132 - 183
Target Start/End: Complemental strand, 21710869 - 21710818
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 183  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  21710869 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 21710818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 11158261 - 11158207
Alignment:
Q  12 aaaggtcagaagcagttttacgtgaaacaagttttgggggag-aaaaccaagaac 65  Q
    ||||||||||| |  ||||||||||||||||||||||| ||| ||||||||||||    
T  11158261 aaaggtcagaaacgtttttacgtgaaacaagttttgggagagaaaaaccaagaac 11158207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 5381765 - 5381713
Alignment:
Q  16 gtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    |||| ||||||||| |||| |||||||||||||| || ||||||||||||||||    
T  5381765 gtcataagcagtttcacgtaaaacaagttttgggaga-aaaaccaagaacaagg 5381713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 140; Significance: 3e-73; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 124 - 327
Target Start/End: Original strand, 8045828 - 8046030
Alignment:
Q  124 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 223  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  8045828 aaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 8045926  T
Q  224 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 323  Q
    ||||| | ||  ||||||||||||| ||||||| |||  ||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  8045927 ggtttgacgagaattctgaagggaaatgggtaaagataatgttaattctcttgtaatataatgttcagaatgaaaacttaatccttgttgttgctgtgat 8046026  T
Q  324 cata 327  Q
    ||||    
T  8046027 cata 8046030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 124 - 327
Target Start/End: Complemental strand, 11848173 - 11847964
Alignment:
Q  124 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaa------ttgag 217  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || |||||||| ||||| ||      |||||    
T  11848173 aaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaatcaattgag 11848074  T
Q  218 ggttagggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgc 317  Q
    ||||||||||| |||| |||||||||| | | |||||||||||| ||||||| |  || ||||||||||||||||||||||||||||||||||||| |||    
T  11848073 ggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatccttttataatataatgttcagaatgaaaacttaatctttgttgttgc 11847974  T
Q  318 tgtgatcata 327  Q
    ||||||||||    
T  11847973 tgtgatcata 11847964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 132 - 242
Target Start/End: Complemental strand, 53483756 - 53483646
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaat-tgagggttagggtttaa 230  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||  ||||||| |||||  ||| |||   ||||||||| |    
T  53483756 ggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaattagggtttga 53483658  T
Q  231 tgatgattctga 242  Q
    ||||||||||||    
T  53483657 tgatgattctga 53483646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 2 - 184
Target Start/End: Complemental strand, 18213948 - 18213768
Alignment:
Q  2 gaggagaagcaaaggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaaggtcgagtgagatgaacaagtatagtcagagaat 101  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    ||| || |||| |||  |||||||||||    
T  18213948 gaggaaaagaaaaggtcagaagcagttttacgtgaaacaagttttgggagagaaaatcaagaacaagg----gtgggaagaactagtggagtcagagaat 18213853  T
Q  102 ctggtcgttgtgcgtttcttc--taaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 184  Q
    | | | ||||||| ||| |||    ||| || |||||||||||| ||| |  ||||| || ||||| ||| ||||||||||||||    
T  18213852 ccgattgttgtgcttttgttcatctaaattaaggtaagggtgaggctaaccttcaatgattataatatatgatttctgaaaattg 18213768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 16157966 - 16157902
Alignment:
Q  3 aggagaagcaaaggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaa 67  Q
    |||| ||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  16157966 aggaaaagaaaatgtcagaagcagttttacgtgaaacaagttttgggagagaaaaccaagaacaa 16157902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 2757508 - 2757449
Alignment:
Q  3 aggagaagcaaaggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaag 62  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  2757508 aggaaaagaaaaggtcagaagcagttttacgtgaaacaagttttgggagagaaaaccaag 2757449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 15408191 - 15408139
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 184  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  15408191 ggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 15408139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 15535294 - 15535235
Alignment:
Q  3 aggagaagcaaaggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaag 62  Q
    |||| ||| |||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  15535294 aggaaaagaaaaggttagaagcagttttacgtgaaacaagttttgggagagaaaaccaag 15535235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 62
Target Start/End: Original strand, 49546840 - 49546883
Alignment:
Q  19 agaagcagttttacgtgaaacaagttttgggggagaaaaccaag 62  Q
    ||||||||||||||||||||||||||||||| ||||||||||||    
T  49546840 agaagcagttttacgtgaaacaagttttgggagagaaaaccaag 49546883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 14063836 - 14063794
Alignment:
Q  27 ttttacgtgaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  14063836 ttttacgtgaaacaagttttgggagagaaaaccaagaacaagg 14063794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 185
Target Start/End: Complemental strand, 8834948 - 8834895
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 185  Q
    |||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  8834948 ggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 8834895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 185
Target Start/End: Complemental strand, 13888694 - 13888641
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 185  Q
    |||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  13888694 ggtaagggtgaggctaactctcaatgatcataatgtataatttctgaaaattga 13888641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 132 - 183
Target Start/End: Complemental strand, 14486712 - 14486661
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 183  Q
    ||||||||||||||||||  ||||| |||||||| |||||||||||||||||    
T  14486712 ggtaagggtgagactatccttcaatgatcataatatataatttctgaaaatt 14486661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 134 - 185
Target Start/End: Original strand, 22724691 - 22724742
Alignment:
Q  134 taagggtgagactatctctcaataatcataatctataatttctgaaaattga 185  Q
    |||||||||||||||||||||||||| ||| | || ||||||||||||||||    
T  22724691 taagggtgagactatctctcaataataatagtatagaatttctgaaaattga 22724742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 132 - 185
Target Start/End: Complemental strand, 15245268 - 15245215
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 185  Q
    |||||||||||| ||| |||||||| ||| |||| |||||||||||||||||||    
T  15245268 ggtaagggtgaggctaactctcaatgatcgtaatatataatttctgaaaattga 15245215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 185
Target Start/End: Complemental strand, 15308171 - 15308120
Alignment:
Q  134 taagggtgagactatctctcaataatcataatctataatttctgaaaattga 185  Q
    |||||||||| ||| |||||||| ||| |||| |||||||||||||||||||    
T  15308171 taagggtgaggctaactctcaatgatcgtaatatataatttctgaaaattga 15308120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 43283943 - 43283997
Alignment:
Q  15 ggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    |||||||| ||||||||||| ||||||||||||| |  ||||| |||||||||||    
T  43283943 ggtcagaatcagttttacgtaaaacaagttttggagaggaaaaacaagaacaagg 43283997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 27906315 - 27906266
Alignment:
Q  134 taagggtgagactatctctcaataatcataatctataatttctgaaaatt 183  Q
    |||||||| || ||||| ||||| |||||||| |||||||||||||||||    
T  27906315 taagggtgggattatctttcaatgatcataatgtataatttctgaaaatt 27906266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 15747552 - 15747592
Alignment:
Q  124 aaaactatggtaagggtgagactatctctcaataatcataa 164  Q
    ||||||| |||||||||||||||| ||||||||||| ||||    
T  15747552 aaaactaaggtaagggtgagactaactctcaataattataa 15747592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 137; Significance: 2e-71; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 132 - 327
Target Start/End: Original strand, 14399 - 14595
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagtttt-ggaaaataaattgagggttagggtttaa 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||| |    
T  14399 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttga 14498  T
Q  231 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 327  Q
    |||||||||||||||||| |||||||||||| |||||||||  ||||||| | |||||| ||||||||||||||||| || || |||||||||||||    
T  14499 tgatgattctgaagggaaatgggtaatgatcatgttaattctgttgtaatgtgatgttccgaatgaaaacttaatctatgctgttgctgtgatcata 14595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 14271 - 14325
Alignment:
Q  3 aggagaagcaaaggtcagaagcagttttacgtgaaacaagttttgggggagaaaa 57  Q
    |||| ||| |||||| ||||||||||||||||||||||||||||||| |||||||    
T  14271 aggaaaagaaaaggttagaagcagttttacgtgaaacaagttttgggagagaaaa 14325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 133; Significance: 5e-69; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 124 - 327
Target Start/End: Original strand, 746 - 949
Alignment:
Q  124 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggtta 222  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  746 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaaaataaattgagggtta 845  T
Q  223 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 322  Q
    |||||| |||| |||| ||||||||| |||||||||||| || |||| | ||||||||||||||||||| || ||||||||||| |||||| || |||||    
T  846 gggtttgatgaggattatgaagggaaatgggtaatgatcatgataatactcttgtaatataatgttcaggataaaaacttaatc-ttgttgttgatgtga 944  T
Q  323 tcata 327  Q
    |||||    
T  945 tcata 949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 133; Significance: 5e-69; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 3 - 307
Target Start/End: Complemental strand, 6483898 - 6483595
Alignment:
Q  3 aggagaagcaaaggtcagaagcagttttacgtgaaacaagttttgggggagaaaa-ccaagaacaaggtcgagtgagatgaacaagtatagtca-gagaa 100  Q
    |||| ||| |||||| ||||||||||||||||||||||||||||||| ||||||| ||||| ||||||    | |||| || |||||| || || | |||    
T  6483898 aggaaaagaaaaggttagaagcagttttacgtgaaacaagttttgggagagaaaaaccaaggacaagg----gagagaagagcaagtagagccaagggaa 6483803  T
Q  101 tctggtcgttgtgcgtttcttcta--aaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag 198  Q
    || | | ||||||| ||| |||    ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  6483802 tcggattgttgtgcttttgttcatctaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatag 6483703  T
Q  199 ttttggaaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaa 298  Q
    |||||||||||||||||||||||||||||| ||||||||| ||| ||||| |||||| ||||| |||||||||  ||||||  ||||||| |||||||||    
T  6483702 ttttggaaaataaattgagggttagggtttgatgatgattttgaggggaa-tgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaa 6483604  T
Q  299 acttaatct 307  Q
    |||||||||    
T  6483603 acttaatct 6483595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 3 - 307
Target Start/End: Complemental strand, 6487365 - 6487062
Alignment:
Q  3 aggagaagcaaaggtcagaagcagttttacgtgaaacaagttttgggggagaaaa-ccaagaacaaggtcgagtgagatgaacaagtatagtca-gagaa 100  Q
    |||| ||| |||||| ||||||||||||||||||||||||||||||| ||||||| ||||| ||||||    | |||| || |||||| || || | |||    
T  6487365 aggaaaagaaaaggttagaagcagttttacgtgaaacaagttttgggagagaaaaaccaaggacaagg----gagagaagagcaagtagagccaagggaa 6487270  T
Q  101 tctggtcgttgtgcgtttcttcta--aaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag 198  Q
    || | | ||||||| ||| |||    ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  6487269 tcggattgttgtgcttttgttcatctaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatag 6487170  T
Q  199 ttttggaaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaa 298  Q
    |||||||||||||||||||||||||||||| ||||||||| ||| ||||| |||||| ||||| |||||||||  ||||||  ||||||| |||||||||    
T  6487169 ttttggaaaataaattgagggttagggtttgatgatgattttgaggggaa-tgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaa 6487071  T
Q  299 acttaatct 307  Q
    |||||||||    
T  6487070 acttaatct 6487062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 132 - 327
Target Start/End: Original strand, 19661457 - 19661651
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 231  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||    
T  19661457 ggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttgat 19661556  T
Q  232 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 327  Q
    ||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||| |||||||||||||||||| | ||| || ||||||||||    
T  19661557 gatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttgttgtgatcata 19661651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 124 - 297
Target Start/End: Complemental strand, 26583886 - 26583715
Alignment:
Q  124 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 223  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  26583886 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 26583788  T
Q  224 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaa 297  Q
    || || ||||||||||||| |||||  ||||||||||| |||||| |   ||||||  | ||||||||||||||    
T  26583787 ggcttgatgatgattctgaggggaa-agggtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaa 26583715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 132 - 307
Target Start/End: Complemental strand, 23879059 - 23878885
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 231  Q
    ||||||||||||||||||||||| |||| || || |||||||||  ||||||||||||||||||||   |||   | |||||||||||||||||||   |    
T  23879059 ggtaagggtgagactatctctcattaataattatatataatttcgaaaaattgacctaattgcttaaccttgaggattaaattgagggttagggttgt-t 23878961  T
Q  232 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 307  Q
    ||||||||||| |||||| ||||||||||| ||||||||   ||||||| | ||||||||||||||| ||||||||    
T  23878960 gatgattctgaggggaatggggtaatgatcatgttaattatgttgtaatgtgatgttcagaatgaaatcttaatct 23878885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 132 - 327
Target Start/End: Original strand, 23089058 - 23089253
Alignment:
Q  132 ggtaagggtgagactatctctcaataatc-ataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaa 230  Q
    ||||||||||||||||||||||| ||||  ||||| | ||||||| |||||||||||||||||||||   |||   |  ||||||||||||||||||| |    
T  23089058 ggtaagggtgagactatctctcattaatagataatatttaatttcggaaaattgacctaattgcttaaccttgaggataaaattgagggttagggtttga 23089157  T
Q  231 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 327  Q
    |||||||||| ||||| | |||||||||||| ||||||||   ||||||| | | |||| |||||||| |||||||| |  || |||||||||||||    
T  23089158 tgatgattct-aaggggaatgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactgttgctgtgatcata 23089253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 132 - 307
Target Start/End: Original strand, 23101466 - 23101641
Alignment:
Q  132 ggtaagggtgagactatctctcaataatc-ataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaa 230  Q
    ||||||||||||||||||||||| ||||  ||||| | ||||||| ||||||||||||||||| |||   |||   |  ||||||||||||||||||| |    
T  23101466 ggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgtttaaccttgaggataaaattgagggttagggtttga 23101565  T
Q  231 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 307  Q
    |||||||||||| ||||| |||||||||||| ||||||||   ||||||| | | |||| |||||||| ||||||||    
T  23101566 tgatgattctgaggggaa-tgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatct 23101641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 6743178 - 6743244
Alignment:
Q  3 aggagaagcaaaggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  6743178 aggaaaagaaaaggtcagaagcagttttacgtgaaacaagttttgggagagaaaaccaagaacaagg 6743244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 43694645 - 43694579
Alignment:
Q  3 aggagaagcaaaggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  43694645 aggaaaagaaaaggtcagaagcagttttacgtgaaacaagttttgggagagaaaaccaagaacaagg 43694579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 132 - 242
Target Start/End: Original strand, 5706027 - 5706137
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaat-tgagggttagggtttaa 230  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||  ||||||| |||||  ||| |||   ||||||||| |    
T  5706027 ggtaagggtgagactatctctcattaatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaattagggtttga 5706125  T
Q  231 tgatgattctga 242  Q
    ||||||||||||    
T  5706126 tgatgattctga 5706137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 132 - 193
Target Start/End: Complemental strand, 23265194 - 23265133
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 193  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  23265194 ggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23265133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 132 - 193
Target Start/End: Complemental strand, 23280262 - 23280201
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 193  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  23280262 ggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23280201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 9243128 - 9243074
Alignment:
Q  15 ggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  9243128 ggtcagaagcagttttacgtgaaacaagttttgggagagaaaatcaagaacaagg 9243074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 132 - 190
Target Start/End: Complemental strand, 21908411 - 21908353
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaa 190  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||    
T  21908411 ggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatctaa 21908353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 10683812 - 10683871
Alignment:
Q  3 aggagaagcaaaggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaag 62  Q
    |||| ||| |||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  10683812 aggaaaagaaaaggttagaagcagttttacgtgaaacaagttttgggagagaaaaccaag 10683871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 20262332 - 20262273
Alignment:
Q  3 aggagaagcaaaggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaag 62  Q
    |||| ||| |||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  20262332 aggaaaagaaaaggttagaagcagttttacgtgaaacaagttttgggagagaaaaccaag 20262273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 26 - 69
Target Start/End: Complemental strand, 24944460 - 24944417
Alignment:
Q  26 gttttacgtgaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  24944460 gttttacgtgaaacaagttttgggagagaaaaccaagaacaagg 24944417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 132 - 185
Target Start/End: Complemental strand, 24661629 - 24661576
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 185  Q
    |||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  24661629 ggtaagggtgaggctaactctcgatgatcataatatataatttctgaaaattga 24661576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 132 - 183
Target Start/End: Complemental strand, 10628 - 10577
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 183  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  10628 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 10577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 132 - 183
Target Start/End: Original strand, 25180933 - 25180984
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 183  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  25180933 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 25180984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 20649217 - 20649164
Alignment:
Q  16 gtcagaagcagttttacgtg-aaacaagttttgggggagaaaaccaagaacaagg 69  Q
    |||||||||||||||||||| |||||||||||||| || |||||||||| |||||    
T  20649217 gtcagaagcagttttacgtgaaaacaagttttgggaga-aaaaccaagagcaagg 20649164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 201870 - 201800
Alignment:
Q  3 aggagaagcaaaggtcagaagcagttttacgt----gaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    |||| ||| |||||||||||||||||| ||||     | |||||||||||| |||||||||||||||||||    
T  201870 aggaaaagaaaaggtcagaagcagtttcacgtacaacagacaagttttgggagagaaaaccaagaacaagg 201800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 232
Target Start/End: Complemental strand, 26885233 - 26885133
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagtt-ttggaaaataaattgagggttagggtttaa 230  Q
    |||||||||| || ||||| ||||||||| |||| ||||||||||||||||| | ||||| |  ||||| ||||| || ||||||||  ||||||| |||    
T  26885233 ggtaagggtgggattatctttcaataatc-taatgtataatttctgaaaattaatctaatggaatagttcttggagaaaaaattgagaattagggtataa 26885135  T
Q  231 tg 232  Q
    ||    
T  26885134 tg 26885133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 69
Target Start/End: Complemental strand, 23265298 - 23265254
Alignment:
Q  26 gttttacgtgaaacaagttttgggggagaa-aaccaagaacaagg 69  Q
    |||||||||||||||||||||||| ||||| |||||||| |||||    
T  23265298 gttttacgtgaaacaagttttgggagagaagaaccaagagcaagg 23265254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 69
Target Start/End: Complemental strand, 23280366 - 23280322
Alignment:
Q  26 gttttacgtgaaacaagttttgggggagaa-aaccaagaacaagg 69  Q
    |||||||||||||||||||||||| ||||| |||||||| |||||    
T  23280366 gttttacgtgaaacaagttttgggagagaagaaccaagagcaagg 23280322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 124; Significance: 1e-63; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 124 - 306
Target Start/End: Complemental strand, 11401 - 11219
Alignment:
Q  124 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaata-aattgagggtta 222  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  11401 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaatagaattgagggtta 11302  T
Q  223 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatc 306  Q
    |||||| |||||||||||| |||||| || ||||||||| |||||||||  ||||||| | ||||||| ||||||| |||||||    
T  11301 gggtttgatgatgattctggagggaa-tgagtaatgatcatgttaattctgttgtaatgtgatgttcaaaatgaaatcttaatc 11219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 124; Significance: 1e-63; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 132 - 307
Target Start/End: Complemental strand, 44477674 - 44477500
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  44477674 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtttgat 44477575  T
Q  232 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 307  Q
    ||||||| ||| ||||| |||||| ||||| |||||||||  ||||||  ||||||| ||||||||||||||||||    
T  44477574 gatgattttgaggggaa-tgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatct 44477500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 132 - 307
Target Start/End: Complemental strand, 44492832 - 44492658
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  44492832 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtttgat 44492733  T
Q  232 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 307  Q
    ||||||| ||| ||||| |||||| ||||| |||||||||  ||||||  ||||||| ||||||||||||||||||    
T  44492732 gatgattttgaggggaa-tgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatct 44492658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 124 - 308
Target Start/End: Complemental strand, 23866674 - 23866490
Alignment:
Q  124 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 223  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  23866674 aaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 23866576  T
Q  224 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattc-ccttgtaatataatgttcagaatgaaaacttaatctt 308  Q
    ||||| ||||||||| ||||| ||| |||||||||||| |||||||||   |||||||||||||||||||||  ||||||||||||    
T  23866575 ggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatctt 23866490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 132 - 307
Target Start/End: Original strand, 8727736 - 8727911
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttagggtttaa 230  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||| |    
T  8727736 ggtaagggtgagattatccctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttga 8727835  T
Q  231 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 307  Q
     ||||||||||| ||| | |||||| ||||| |||||||||  ||||||| ||||||||||||||||||||||||||    
T  8727836 cgatgattctgaggggta-tgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatct 8727911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 3 - 185
Target Start/End: Complemental strand, 18614449 - 18614271
Alignment:
Q  3 aggagaagcaaaggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaaggtcgagtgagatgaacaagtatagtcagagaatc 102  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    |||||| ||||||||| ||||||||||||    
T  18614449 aggaaaagaaaaggtcagaagcagttttacgtgaaacaagttttgggagagaaaaccaagaacaagg----gtgagaagaacaagtagagtcagagaatc 18614354  T
Q  103 tggtcgttgtgcg-tttcttctaaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 185  Q
     | || ||||||| |||||||| ||| || ||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  18614353 cgatcattgtgcgttttcttct-aaattaaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattga 18614271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 23481938 - 23482117
Alignment:
Q  12 aaaggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaaggtcgagtgagatgaacaagtatagtcagagaatctggtcgttg 111  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    ||| || |||||| |  |||||||||||| | | ||||    
T  23481938 aaaggtcagaagcagttttacgtgaaacaagttttgggagagaaaatcaagaacaagg----gtgggaagaacaactggagtcagagaatccgattgttg 23482033  T
Q  112 tgcgtttcttc--taaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 193  Q
    ||| ||| |||    ||| || |||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  23482034 tgcttttgttcatctaaattaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23482117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 132 - 242
Target Start/End: Complemental strand, 17054642 - 17054533
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 231  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||  ||||||||||||||||  |||  |||||||||| ||    
T  17054642 ggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataagatgaaagttagggtttgat 17054544  T
Q  232 gatgattctga 242  Q
    |||||||||||    
T  17054543 gatgattctga 17054533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 23826385 - 23826319
Alignment:
Q  3 aggagaagcaaaggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  23826385 aggaaaagaaaaggtcagaagcagttttacgtgaaacaagttttgggagagaaaaccaagaacaagg 23826319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 220 - 307
Target Start/End: Original strand, 27940946 - 27941032
Alignment:
Q  220 ttagggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 307  Q
    ||||||||| ||||||||||||| |||||| ||||| ||||| |||||||||  ||||||| |||||||||||||||||| |||||||    
T  27940946 ttagggtttgatgatgattctgaggggaat-gggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaatttaatct 27941032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 8727622 - 8727666
Alignment:
Q  14 aggtcagaagcagttttacgtgaaacaagttttgggggagaaaac 58  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  8727622 aggtcagaagcagttttacgtgaaacaagttttgggagagaaaac 8727666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 21283153 - 21283111
Alignment:
Q  27 ttttacgtgaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  21283153 ttttacgtgaaacaagttttgggagagaaaaccaagaacaagg 21283111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 185
Target Start/End: Complemental strand, 39364972 - 39364919
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 185  Q
    |||||||||||||||||||||||||||| ||| | || ||||||||||||||||    
T  39364972 ggtaagggtgagactatctctcaataataatagtatagaatttctgaaaattga 39364919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 132 - 183
Target Start/End: Original strand, 29643389 - 29643440
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 183  Q
    ||||||||||||| ||||| |||||||||||||| | |||||||||||||||    
T  29643389 ggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 29643440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 21321078 - 21321120
Alignment:
Q  27 ttttacgtgaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    ||||||||||||| ||||||||| |||||||||||||||||||    
T  21321078 ttttacgtgaaaccagttttgggagagaaaaccaagaacaagg 21321120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 14056567 - 14056619
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 184  Q
    |||||||||||||||||||||||||||| ||| | | ||| ||||||||||||    
T  14056567 ggtaagggtgagactatctctcaataataatagtatgtaaattctgaaaattg 14056619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 21325676 - 21325716
Alignment:
Q  27 ttttacgtgaaacaagttttgggggagaaaaccaagaacaa 67  Q
    ||||||||||||| ||||||||| |||||||||||||||||    
T  21325676 ttttacgtgaaaccagttttgggagagaaaaccaagaacaa 21325716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 25112028 - 25111976
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 184  Q
    |||||||||||||||||||||||||||| ||| | | ||| ||||||||||||    
T  25112028 ggtaagggtgagactatctctcaataataatagtatgtaaattctgaaaattg 25111976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 132 - 183
Target Start/End: Original strand, 24320674 - 24320725
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 183  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  24320674 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 24320725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 185
Target Start/End: Complemental strand, 21931749 - 21931696
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 185  Q
    |||||||||||| ||| |||||||| || ||||| ||||| |||||||||||||    
T  21931749 ggtaagggtgaggctaactctcaatgattataatatataacttctgaaaattga 21931696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 122; Significance: 2e-62; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 124 - 327
Target Start/End: Original strand, 1893 - 2095
Alignment:
Q  124 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctg-aaaattgacctaattgcttagttttggaaaataaattgagggtta 222  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||| ||||||||||    
T  1893 aaaactaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaaattgacctaattgtatagttttggaaaataatttgagggtta 1992  T
Q  223 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 322  Q
    |||||| ||||||||| ||| ||  | |||||||||||  ||||||||| |||||||| ||||||||| ||||||||||||||| |||||| ||||||||    
T  1993 gggtttgatgatgattttgatgg--aatgggtaatgattatgttaattctcttgtaatttaatgttcataatgaaaacttaatccttgttgttgctgtga 2090  T
Q  323 tcata 327  Q
    |||||    
T  2091 tcata 2095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 124 - 327
Target Start/End: Original strand, 8570 - 8772
Alignment:
Q  124 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctg-aaaattgacctaattgcttagttttggaaaataaattgagggtta 222  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||| ||||||||||    
T  8570 aaaactaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaaattgacctaattgtatagttttggaaaataatttgagggtta 8669  T
Q  223 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 322  Q
    |||||| ||||||||| ||| ||  | |||||||||||  ||||||||| |||||||| ||||||||| ||||||||||||||| |||||| ||||||||    
T  8670 gggtttgatgatgattatgatgg--aatgggtaatgattatgttaattctcttgtaatttaatgttcaaaatgaaaacttaatccttgttgttgctgtga 8767  T
Q  323 tcata 327  Q
    |||||    
T  8768 tcata 8772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 120; Significance: 3e-61; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 124 - 327
Target Start/End: Complemental strand, 350 - 149
Alignment:
Q  124 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 223  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  350 aaaactaaggtaagggtgagactatctctcaataaccataatctataatttctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 252  T
Q  224 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 323  Q
    ||||| ||||||||||||| ||||| |||||||||||| ||||||||  |||||| |||  |||||||| |||| ||||||||| ||||  || ||||||    
T  251 ggtttgatgatgattctgaggggaa-tgggtaatgatcatgttaattttcttgtattatggtgttcagattgaagacttaatctatgttattgatgtgat 153  T
Q  324 cata 327  Q
    ||||    
T  152 cata 149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 113; Significance: 4e-57; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 132 - 307
Target Start/End: Original strand, 10199 - 10374
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttagggtttaa 230  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||| |||||||||||| |    
T  10199 ggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtttga 10298  T
Q  231 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 307  Q
    |||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||| ||||||||||||||||||    
T  10299 tgatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatct 10374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 113; Significance: 4e-57; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 132 - 307
Target Start/End: Original strand, 1529 - 1704
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttagggtttaa 230  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||| |||||||||||| |    
T  1529 ggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtttga 1628  T
Q  231 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 307  Q
    |||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||| ||||||||||||||||||    
T  1629 tgatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatct 1704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 113; Significance: 4e-57; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 124 - 326
Target Start/End: Complemental strand, 18229 - 18026
Alignment:
Q  124 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggtta 222  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  18229 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttttgaaaattgacctaattgcttagctttaggaaaataaattgagggtta 18130  T
Q  223 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattc-ccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtg 321  Q
     ||||||||||||||||| | ||||| | ||||||| || |||||||||   ||||||| | |||| |||||||||||||||| || ||||| |||||||    
T  18129 aggtttaatgatgattctaacgggaaat-ggtaatggtcatgttaattctgtttgtaatgtgatgtccagaatgaaaacttaacctatgttgttgctgtg 18031  T
Q  322 atcat 326  Q
    |||||    
T  18030 atcat 18026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 3 - 193
Target Start/End: Complemental strand, 117074 - 116887
Alignment:
Q  3 aggagaagcaaaggtcagaagcagttttacgtgaaa-caagttttgggggagaaaaccaagaacaaggtcgagtgagatgaacaagtatagtcagagaat 101  Q
    |||| ||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||    ||||||  |||||||  |||||||||||    
T  117074 aggaaaagaaaaggtcagaagcagttttacgtgaaaacaagttttgggagagaaaaccaagaacaagg----gtgagaaaaacaagtggagtcagagaat 116979  T
Q  102 ctggtcgttgtgcgttt-cttctaaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 193  Q
    | | |||||||| |||| ||||||||  || |||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  116978 ccgatcgttgtgtgttttcttctaaat-taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 116887  T

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Target: scaffold0154 (Bit Score: 90; Significance: 2e-43; HSPs: 2)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 124 - 268
Target Start/End: Complemental strand, 30917 - 30772
Alignment:
Q  124 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaat-aaattgagggtta 222  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  | ||||||||| |||    
T  30917 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaggtaaaattgaggatta 30818  T
Q  223 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaa 268  Q
    |||||| ||||||||| ||| |||||| | |||| |||| ||||||    
T  30817 gggtttgatgatgattttgaggggaatggtgtaacgatcatgttaa 30772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 17463 - 17530
Alignment:
Q  3 aggagaagcaaaggtcagaagcagttttacgtgaaacaagttttgggggag-aaaaccaagaacaagg 69  Q
    |||| ||| |||||| ||||| ||||||||||||||||||||||||| ||| ||||||||| ||||||    
T  17463 aggaaaagaaaaggttagaagaagttttacgtgaaacaagttttgggagagaaaaaccaaggacaagg 17530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 124 - 242
Target Start/End: Original strand, 1728 - 1845
Alignment:
Q  124 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 223  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||  ||||||||||||||||  |||  |||||    
T  1728 aaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaagttag 1826  T
Q  224 ggtttaatgatgattctga 242  Q
    ||||| |||||||||||||    
T  1827 ggtttgatgatgattctga 1845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 124 - 242
Target Start/End: Original strand, 5751 - 5868
Alignment:
Q  124 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 223  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||  ||||||||||||||||  |||  |||||    
T  5751 aaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaagttag 5849  T
Q  224 ggtttaatgatgattctga 242  Q
    ||||| |||||||||||||    
T  5850 ggtttgatgatgattctga 5868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 132 - 325
Target Start/End: Original strand, 3296 - 3490
Alignment:
Q  132 ggtaagggtgagactatctctcaataatc-ataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaa 230  Q
    ||||||||||||||||||||||| ||||  ||||| | ||||||| |||||||||||||||||||||   ||||  |  ||||||||||||||||||| |    
T  3296 ggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgcttaaccttggggataaaattgagggttagggtttga 3395  T
Q  231 tgatgattctgaagggaattgggtaatg-atcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatca 325  Q
    |||||||||||| ||||| ||||||||| ||| ||||||||   ||||||| | ||||||||||||||| |||||||| |  || |||||||||||    
T  3396 tgatgattctgaggggaa-tgggtaatgaatcatgttaattttgttgtaatgtgatgttcagaatgaaatcttaatctatactgttgctgtgatca 3490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 132 - 307
Target Start/End: Original strand, 3625 - 3800
Alignment:
Q  132 ggtaagggtgagactatctctcaataatc-ataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaa 230  Q
    ||||||||||||||||||||||| ||||  ||||| | ||||||| |||||||||||||||||||||   |||   |  ||||||||||||||||||| |    
T  3625 ggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgcttaaccttgaggataaaattgagggttagggtttga 3724  T
Q  231 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 307  Q
    |||||||||||| ||| | |||||||||||| ||||||||   ||||||| | |||||| |||||||| ||||||||    
T  3725 tgatgattctgaggggga-tgggtaatgatcatgttaattatgttgtaatgtgatgttcggaatgaaatcttaatct 3800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 184
Target Start/End: Original strand, 8645 - 8825
Alignment:
Q  2 gaggagaagcaaaggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaaggtcgagtgagatgaacaagtatagtcagagaat 101  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    ||| || ||||||||  |||||||||||    
T  8645 gaggaaaagaaaaggtcagaagcagttttacgtgaaacaagttttgggagagaaaatcaagaacaagg----gtgggaagaacaagtggagtcagagaat 8740  T
Q  102 ctggtcgttgtgcgtttcttc--taaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 184  Q
    ||| | ||||||| ||| |||    ||| || |||||||||||| ||| |  ||||| || ||||| |||  |||||||||||||    
T  8741 ctgattgttgtgcttttgttcatctaaattaaggtaagggtgaggctaaccttcaatgattataatatatggtttctgaaaattg 8825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 39646 - 39580
Alignment:
Q  3 aggagaagcaaaggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  39646 aggaaaagaaaaggtcagaagcagttttacgtgaaacaagttttgggagagaaaaccaagaacaagg 39580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 12916 - 12982
Alignment:
Q  3 aggagaagcaaaggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  12916 aggaaaagaaaaggtcagaagcagttttacgtgaaacaagttttgggagagaaaaccaagaacaagg 12982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 40693 - 40748
Alignment:
Q  14 aggtcagaagcagttttacgt-gaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    |||||||||||||||||||||  || ||||||||||| || ||||||||||||||||    
T  40693 aggtcagaagcagttttacgtacaatcaagttttgggaga-aaaaccaagaacaagg 40748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 29077 - 29143
Alignment:
Q  3 aggagaagcaaaggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  29077 aggaaaagaaaaggtcagaagcagttttacgtgaaacaagttttgggagagaaaaccaagaacaagg 29143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 34478 - 34544
Alignment:
Q  3 aggagaagcaaaggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  34478 aggaaaagaaaaggtcagaagcagttttacgtgaaacaagttttgggagagaaaaccaagaacaagg 34544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 55; Significance: 2e-22; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 45911 - 45977
Alignment:
Q  3 aggagaagcaaaggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  45911 aggaaaagaaaaggtcagaagcagttttacgtgaaacaagttttgggagagaaaaccaagaacaagg 45977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 51315 - 51381
Alignment:
Q  3 aggagaagcaaaggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  51315 aggaaaagaaaaggtcagaagcagttttacgtgaaacaagttttgggagagaaaaccaagaacaagg 51381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 31 - 181
Target Start/End: Complemental strand, 69896 - 69749
Alignment:
Q  31 acgtgaaacaagttttgggggagaaaaccaagaacaaggtcgagtgagatgaacaagtatagtc-agagaatctggtcgttgtgcg-tttcttctaaaac 128  Q
    ||||||||||||||||||| |||||||||||||||||||    | |||| ||||||||| || | |||||||  | |||||| ||| |||||||| |||     
T  69896 acgtgaaacaagttttgggagagaaaaccaagaacaagg----gagagaagaacaagtagagccaagagaattcgatcgttgcgcgttttcttct-aaat 69802  T
Q  129 tatggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 181  Q
    || |||||||||||||||| || ||||| ||| |||| |||||||| ||||||    
T  69801 taaggtaagggtgagactaactttcaatgatcttaatatataatttatgaaaa 69749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 173493 - 173559
Alignment:
Q  3 aggagaagcaaaggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  173493 aggaaaagaaaaggtcagaagcagttttacgtgaaacaagttttgggagagaaaaccaagaacaagg 173559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 132 - 240
Target Start/End: Original strand, 45278 - 45386
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaat-tgagggttagggtttaa 230  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||  ||||||| |||||  ||| |||   ||||||||| |    
T  45278 ggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaattagggtttga 45376  T
Q  231 tgatgattct 240  Q
    ||||||||||    
T  45377 tgatgattct 45386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 26 - 143
Target Start/End: Complemental strand, 6653 - 6540
Alignment:
Q  26 gttttacgtgaaacaagttttgggggagaaaaccaagaacaaggtcgagtgagatgaacaagtatagtcagagaatctggtcgttgtgcg-tttcttcta 124  Q
    |||||||||||||||||||||||| |||||||||||||||||||    |||||| ||||||||| || ||||||||  | |||||||||| ||||||||     
T  6653 gttttacgtgaaacaagttttgggagagaaaaccaagaacaagg----gtgagaagaacaagtagagccagagaattcgatcgttgtgcgttttcttct- 6559  T
Q  125 aaactatggtaagggtgag 143  Q
    ||| || ||||||||||||    
T  6558 aaattaaggtaagggtgag 6540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 132 - 193
Target Start/End: Complemental strand, 16872 - 16811
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 193  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  16872 ggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 16811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 12 - 162
Target Start/End: Original strand, 78977 - 79125
Alignment:
Q  12 aaaggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaaggtcgagtgagatgaacaagtatagtc-agagaatctggtcgtt 110  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||    | |||| || |||||| || | |||||||| | |||||    
T  78977 aaaggttagaagcagttttacgtgaaacaagttttgggagagaaaacaaagaacaagg----gagagaagagcaagtagagccgagagaatccgatcgtt 79072  T
Q  111 gtgcg--tttcttctaaaactatggtaagggtgagactatctctcaataatcat 162  Q
    |||||  |||||||| ||| || |||||||||||| ||| |||||||| |||||    
T  79073 gtgcgtttttcttct-aaattaaggtaagggtgaggctaactctcaatgatcat 79125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 13793 - 13743
Alignment:
Q  19 agaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  13793 agaagcagttttacgtgaaacaagttttgggagagaaaaccaagaacaagg 13743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 132 - 193
Target Start/End: Complemental strand, 13684 - 13623
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 193  Q
    ||||||||||||||||||||||||||||| ||||  |||||||||||||||||| |||||||    
T  13684 ggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 13623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 47; Significance: 1e-17; HSPs: 3)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 34607 - 34553
Alignment:
Q  15 ggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  34607 ggtcagaagcagttttacgtgaaacaagttttgggagagaaaatcaagaacaagg 34553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 135525 - 135473
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 184  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  135525 ggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 135473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 13747 - 13695
Alignment:
Q  16 gtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    |||||||||||||| |||| |||||||||||||| || ||||||||||||||||    
T  13747 gtcagaagcagtttcacgtaaaacaagttttgggaga-aaaaccaagaacaagg 13695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 132 - 193
Target Start/End: Original strand, 11 - 72
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 193  Q
    ||||||||||||||||||||||||||||| ||||  |||||||||||||||||| |||||||    
T  11 ggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 72  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 132 - 193
Target Start/End: Original strand, 101931 - 101992
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 193  Q
    |||||||||||||||||||||||||||||||| | ||||||| ||||||||||| |||||||    
T  101931 ggtaagggtgagactatctctcaataatcatagtatataattcctgaaaattgatctaattg 101992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 17695 - 17643
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 184  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  17695 ggtaagggtgagactatctctcaataaccataatgtataatttctgaaaattg 17643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 40535 - 40587
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 184  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  40535 ggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 40587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 40439 - 40483
Alignment:
Q  24 cagttttacgtgaaacaagttttgggggagaaaaccaagaacaag 68  Q
    ||||||||||||||||||||||||| |  ||||||||||||||||    
T  40439 cagttttacgtgaaacaagttttggagaggaaaaccaagaacaag 40483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 182
Target Start/End: Original strand, 22596 - 22646
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaat 182  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  22596 ggtaagggtgagactatctctcaataatcatagtatataatttctgaaaat 22646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 34279 - 34331
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 184  Q
    |||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  34279 ggtaagggtgagactatctctcgataatcatagtatataatttctgaaaattg 34331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 34169 - 34220
Alignment:
Q  19 agaagcagttttacgtgaaacaagttttgggggagaa-aaccaagaacaagg 69  Q
    ||||||||||||||||||||||||||||||| || || ||||||||||||||    
T  34169 agaagcagttttacgtgaaacaagttttgggagaaaagaaccaagaacaagg 34220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 26 - 69
Target Start/End: Original strand, 2422 - 2465
Alignment:
Q  26 gttttacgtgaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  2422 gttttacgtgaaacaagttttgggagagaaaaccaagaacaagg 2465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 185
Target Start/End: Complemental strand, 12349 - 12296
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 185  Q
    |||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  12349 ggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 12296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 132 - 192
Target Start/End: Complemental strand, 1438 - 1378
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaatt 192  Q
    ||||||||||||||||||| ||||| ||||| || |||||||| |||||||||| ||||||    
T  1438 ggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaattgatctaatt 1378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 37; Significance: 0.000000000009; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 15000 - 15052
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 184  Q
    |||||||||||||||| |||||||| ||| |||| ||||||||||||||||||    
T  15000 ggtaagggtgagactaactctcaatgatcttaatatataatttctgaaaattg 15052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 1957 - 2014
Alignment:
Q  12 aaaggtcagaagcagttttacgt-gaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    |||||| ||||||||||||||||  |||||||||||||| || ||||||||||||||||    
T  1957 aaaggtaagaagcagttttacgtacaaacaagttttgggaga-aaaaccaagaacaagg 2014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 288 - 327
Target Start/End: Complemental strand, 3558 - 3519
Alignment:
Q  288 tcagaatgaaaacttaatctttgttgctgctgtgatcata 327  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  3558 tcagaatgaaaacttaatctttgttgttgctgtgatcata 3519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0506 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0506
Description:

Target: scaffold0506; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 9336 - 9294
Alignment:
Q  27 ttttacgtgaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    ||||||||||||| ||||||||| |||||||||||||||||||    
T  9336 ttttacgtgaaaccagttttgggagagaaaaccaagaacaagg 9294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 6034 - 5982
Alignment:
Q  16 gtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    |||||||||||||| |||| |||||||||||||| || ||||||||||||||||    
T  6034 gtcagaagcagtttcacgtaaaacaagttttgggaga-aaaaccaagaacaagg 5982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 13563 - 13511
Alignment:
Q  16 gtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    |||||||||||||| |||| |||||||||||||| || ||||||||||||||||    
T  13563 gtcagaagcagtttcacgtaaaacaagttttgggaga-aaaaccaagaacaagg 13511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 132 - 185
Target Start/End: Original strand, 39510 - 39563
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 185  Q
    |||||||||||| ||| |||||||| |||||||| ||||||||| |||||||||    
T  39510 ggtaagggtgaggctaactctcaatgatcataatatataatttcagaaaattga 39563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 180
Target Start/End: Complemental strand, 1501 - 1453
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaa 180  Q
    |||||||||||||||| |||||||| ||| |||| ||||||||||||||    
T  1501 ggtaagggtgagactaactctcaatgatcttaatgtataatttctgaaa 1453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 24136 - 24081
Alignment:
Q  13 aaggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    ||||||||||||||||| |||| |||||||||||||| || ||||||||| ||||||    
T  24136 aaggtcagaagcagtttcacgtaaaacaagttttgggaga-aaaaccaaggacaagg 24081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 13581 - 13526
Alignment:
Q  13 aaggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    |||||| |||||||||| | || |||||||||||||| || ||||||||||||||||    
T  13581 aaggtcggaagcagtttcatgtaaaacaagttttgggaga-aaaaccaagaacaagg 13526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 132 - 183
Target Start/End: Original strand, 1916 - 1967
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 183  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  1916 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 1967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 32; Significance: 0.000000009; HSPs: 2)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 132 - 183
Target Start/End: Complemental strand, 9387 - 9336
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 183  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  9387 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 9336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 14540 - 14605
Alignment:
Q  3 aggagaagcaaaggtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaag 68  Q
    |||| ||| ||||||||| ||||||||||||| ||||||||||||  |  ||||| ||||||||||    
T  14540 aggaaaagtaaaggtcagtagcagttttacgtaaaacaagttttgcagaggaaaagcaagaacaag 14605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 132 - 183
Target Start/End: Complemental strand, 10290 - 10239
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 183  Q
    ||||||||||||| |||||  ||||||||||||| | |||||||||||||||    
T  10290 ggtaagggtgagattatcttccaataatcataatatgtaatttctgaaaatt 10239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 132 - 183
Target Start/End: Complemental strand, 135489 - 135438
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 183  Q
    |||||| |||||| ||||| |||||| ||||||| |||||||||||||||||    
T  135489 ggtaagcgtgagattatctttcaatagtcataatatataatttctgaaaatt 135438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 26 - 69
Target Start/End: Original strand, 170868 - 170911
Alignment:
Q  26 gttttacgtgaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    ||||||||||||||||||||||   |||||||||||||||||||    
T  170868 gttttacgtgaaacaagttttgaaagagaaaaccaagaacaagg 170911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 132 - 183
Target Start/End: Original strand, 493032 - 493082
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 183  Q
    ||||||||||||| ||||| ||||||||| |||| |||||||||||||||||    
T  493032 ggtaagggtgagattatctttcaataatc-taatgtataatttctgaaaatt 493082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2054 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 217
Target Start/End: Complemental strand, 774 - 680
Alignment:
Q  124 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctg-aaaattgacctaattgcttagttttggaaaataaattgag 217  Q
    ||||||| |||||||||| || ||||| ||||| ||| |||| ||||||||||| |||||| ||||||  |  ||||| | ||||||||||||||    
T  774 aaaactaaggtaagggtgggattatctttcaatgatcttaatatataatttctgaaaaattaacctaaaagaatagttcttgaaaataaattgag 680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 193
Target Start/End: Original strand, 5861 - 5922
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 193  Q
    |||||||||| || ||||| ||||| || ||||| ||||||||||||||||| | |||||||    
T  5861 ggtaagggtgggattatctttcaatgattataatatataatttctgaaaattaatctaattg 5922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0583 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0583
Description:

Target: scaffold0583; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 5563 - 5511
Alignment:
Q  16 gtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    |||| ||||||||| |||| |||||||||||||| || ||||||||||||||||    
T  5563 gtcaaaagcagtttcacgtaaaacaagttttgggaga-aaaaccaagaacaagg 5511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 185
Target Start/End: Original strand, 2631 - 2684
Alignment:
Q  132 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 185  Q
    |||||||||||| ||| |||||||| || ||||| ||||| |||||||||||||    
T  2631 ggtaagggtgaggctaactctcaatgattataatatataacttctgaaaattga 2684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 9289 - 9237
Alignment:
Q  16 gtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    |||||||||| ||| |||| |||||||||||||| || ||||||||||||||||    
T  9289 gtcagaagcaatttcacgtaaaacaagttttgggaga-aaaaccaagaacaagg 9237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 71695 - 71643
Alignment:
Q  16 gtcagaagcagttttacgtgaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    |||||||||||||| |||| |||||||||||||| || | ||||||||||||||    
T  71695 gtcagaagcagtttcacgtaaaacaagttttgggaga-agaaccaagaacaagg 71643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0669 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0669
Description:

Target: scaffold0669; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 795 - 850
Alignment:
Q  14 aggtcagaagcagttttacgt-gaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    |||||||||||||||||||||  || ||||||||||| || ||||||||||||||||    
T  795 aggtcagaagcagttttacgtacaatcaagttttgggaga-aaaaccaagaacaagg 850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 26573 - 26518
Alignment:
Q  14 aggtcagaagcagttttacgt-gaaacaagttttgggggagaaaaccaagaacaagg 69  Q
    |||||||||||||||||||||  || ||||||||||| || ||||||||||||||||    
T  26573 aggtcagaagcagttttacgtacaatcaagttttgggaga-aaaaccaagaacaagg 26518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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