View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21013_high_11 (Length: 302)
Name: NF21013_high_11
Description: NF21013
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21013_high_11 |
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Alignment Details
Target: chr2 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 21 - 292
Target Start/End: Complemental strand, 21219221 - 21218950
Alignment:
| Q |
21 |
acatcatcatactcctggaatcttgattatattttactaaatagttgttttgtgcaactatagtacttgattcactgattacactatcgtacttttgatg |
120 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21219221 |
acatcatcatactcctggaatcttgattatattttactaaatagttgttttgtgcaactatagtacttgattcactgattacactatcgtacttttgatg |
21219122 |
T |
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| Q |
121 |
agatcttttagtatacagcaatgtttgactgatttgtcagctgtgctgatatatcctggttaatggatcattttatttattgttttgtgtgtatgtatgt |
220 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
21219121 |
agatcttttagtatacagcaatgtttgactgatttgtcaactgtgctgatatatcctggttaatggatcattttatttattgttctgtgtgtatgtatgt |
21219022 |
T |
|
| Q |
221 |
atcgattctataagattttgtgtcattgtaatatacatccctaatgtaattatttgttttttgtcttctgtg |
292 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21219021 |
atcgattctataagattttgtgtcattgtaatatacatccctaatgtaattatttgttttttgtcttctgtg |
21218950 |
T |
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