View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21013_high_12 (Length: 301)

Name: NF21013_high_12
Description: NF21013
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21013_high_12
NF21013_high_12
[»] chr5 (17 HSPs)
chr5 (22-212)||(19512254-19512444)
chr5 (13-212)||(38144525-38144723)
chr5 (22-212)||(28370052-28370241)
chr5 (20-203)||(22751018-22751201)
chr5 (20-202)||(23528511-23528690)
chr5 (22-89)||(18407941-18408008)
chr5 (21-89)||(23111196-23111264)
chr5 (14-80)||(22438736-22438803)
chr5 (25-79)||(19236900-19236954)
chr5 (25-77)||(22461158-22461210)
chr5 (25-77)||(22467782-22467834)
chr5 (13-80)||(42961566-42961633)
chr5 (21-59)||(8952037-8952075)
chr5 (25-79)||(20781744-20781798)
chr5 (22-59)||(22777067-22777104)
chr5 (11-135)||(34830029-34830152)
chr5 (25-53)||(17021914-17021942)
[»] chr7 (29 HSPs)
chr7 (25-212)||(14422852-14423039)
chr7 (22-212)||(16009445-16009634)
chr7 (22-203)||(10895788-10895969)
chr7 (21-203)||(15168052-15168234)
chr7 (20-203)||(18873237-18873420)
chr7 (14-203)||(12709833-12710022)
chr7 (14-203)||(13122904-13123093)
chr7 (22-212)||(16677161-16677353)
chr7 (22-212)||(17651397-17651589)
chr7 (14-205)||(13743584-13743774)
chr7 (14-202)||(12590633-12590818)
chr7 (14-139)||(13007374-13007497)
chr7 (22-80)||(11382868-11382926)
chr7 (22-80)||(11389345-11389403)
chr7 (14-80)||(21230949-21231015)
chr7 (25-80)||(20311052-20311107)
chr7 (25-88)||(13679485-13679548)
chr7 (22-79)||(11311059-11311116)
chr7 (22-81)||(46625961-46626020)
chr7 (25-79)||(2971254-2971308)
chr7 (25-79)||(20906462-20906516)
chr7 (22-52)||(11304210-11304240)
chr7 (25-79)||(29181110-29181164)
chr7 (19-60)||(831628-831669)
chr7 (19-60)||(1196808-1196849)
chr7 (19-60)||(34958578-34958619)
chr7 (22-59)||(40554515-40554552)
chr7 (22-58)||(13664874-13664910)
chr7 (25-77)||(31155396-31155448)
[»] chr1 (19 HSPs)
chr1 (21-212)||(20437020-20437211)
chr1 (14-139)||(41111977-41112100)
chr1 (21-89)||(32651563-32651631)
chr1 (22-89)||(18712790-18712857)
chr1 (25-80)||(19663517-19663572)
chr1 (22-81)||(20805320-20805379)
chr1 (22-80)||(11158093-11158151)
chr1 (22-81)||(10811780-10811839)
chr1 (25-79)||(20851133-20851187)
chr1 (25-79)||(20857760-20857814)
chr1 (25-79)||(21706276-21706330)
chr1 (25-79)||(21710818-21710872)
chr1 (21-55)||(24476350-24476384)
chr1 (22-55)||(25091415-25091448)
chr1 (14-45)||(11946472-11946503)
chr1 (26-59)||(18271338-18271371)
chr1 (26-59)||(18275992-18276025)
chr1 (22-59)||(18824633-18824670)
chr1 (14-43)||(43629286-43629315)
[»] scaffold0553 (1 HSPs)
scaffold0553 (25-212)||(10196-10383)
[»] scaffold0544 (1 HSPs)
scaffold0544 (25-212)||(1526-1713)
[»] chr6 (30 HSPs)
chr6 (21-212)||(23839066-23839257)
chr6 (22-212)||(4477725-4477915)
chr6 (25-212)||(10986181-10986368)
chr6 (21-203)||(23057815-23057997)
chr6 (14-203)||(29614136-29614325)
chr6 (14-212)||(18800305-18800503)
chr6 (14-159)||(930085-930229)
chr6 (22-212)||(21565209-21565399)
chr6 (14-139)||(12168305-12168428)
chr6 (14-139)||(19287214-19287337)
chr6 (14-139)||(19785859-19785982)
chr6 (14-139)||(19878398-19878521)
chr6 (14-139)||(19884174-19884297)
chr6 (25-139)||(34639987-34640100)
chr6 (25-139)||(34646661-34646774)
chr6 (25-139)||(25469705-25469816)
chr6 (14-80)||(24512833-24512899)
chr6 (22-77)||(9187498-9187553)
chr6 (22-81)||(25348486-25348545)
chr6 (22-81)||(25397172-25397231)
chr6 (22-81)||(25598643-25598702)
chr6 (25-109)||(31252394-31252477)
chr6 (22-81)||(19471332-19471391)
chr6 (21-59)||(24441673-24441711)
chr6 (22-59)||(18659450-18659487)
chr6 (22-81)||(2286764-2286823)
chr6 (22-52)||(12943152-12943182)
chr6 (25-99)||(15458468-15458544)
chr6 (25-99)||(15465063-15465139)
chr6 (25-77)||(11288669-11288721)
[»] chr3 (27 HSPs)
chr3 (25-212)||(23370506-23370693)
chr3 (22-212)||(9534196-9534385)
chr3 (27-212)||(24192823-24193009)
chr3 (21-203)||(14762754-14762936)
chr3 (22-203)||(20247786-20247967)
chr3 (22-203)||(38310797-38310978)
chr3 (14-206)||(16801457-16801648)
chr3 (22-212)||(55499099-55499290)
chr3 (25-202)||(24933829-24934003)
chr3 (14-202)||(41455087-41455272)
chr3 (22-86)||(18929239-18929303)
chr3 (22-89)||(17240510-17240577)
chr3 (25-79)||(13302241-13302295)
chr3 (25-79)||(13323788-13323842)
chr3 (25-139)||(10389444-10389557)
chr3 (25-139)||(10414533-10414646)
chr3 (25-139)||(10421203-10421316)
chr3 (25-79)||(12033445-12033499)
chr3 (25-79)||(13312897-13312951)
chr3 (25-79)||(17131732-17131786)
chr3 (25-79)||(51301589-51301643)
chr3 (22-81)||(16801027-16801086)
chr3 (22-52)||(3803836-3803866)
chr3 (22-52)||(12306085-12306115)
chr3 (25-79)||(14865846-14865900)
chr3 (25-59)||(23392820-23392854)
chr3 (22-59)||(52337953-52337990)
[»] scaffold0026 (2 HSPs)
scaffold0026 (25-212)||(111554-111740)
scaffold0026 (14-203)||(11840-12029)
[»] chr2 (17 HSPs)
chr2 (21-212)||(6483586-6483776)
chr2 (21-212)||(6487053-6487243)
chr2 (21-212)||(19661450-19661640)
chr2 (14-212)||(26583696-26583892)
chr2 (22-212)||(23101460-23101650)
chr2 (22-212)||(23089052-23089242)
chr2 (27-212)||(23878876-23879060)
chr2 (25-139)||(5706024-5706137)
chr2 (22-89)||(23265133-23265200)
chr2 (22-89)||(23280201-23280268)
chr2 (22-86)||(21908353-21908417)
chr2 (22-81)||(24661576-24661635)
chr2 (25-79)||(10577-10631)
chr2 (25-79)||(25180930-25180984)
chr2 (25-123)||(26885139-26885236)
chr2 (25-77)||(23168299-23168351)
chr2 (25-77)||(23579556-23579608)
[»] chr8 (18 HSPs)
chr8 (25-212)||(44477491-44477677)
chr8 (25-212)||(44492649-44492835)
chr8 (22-212)||(8727730-8727920)
chr8 (14-203)||(23866491-23866680)
chr8 (13-212)||(27940840-27941041)
chr8 (14-139)||(17054533-17054656)
chr8 (21-89)||(23482049-23482117)
chr8 (21-135)||(18614217-18614331)
chr8 (22-81)||(39364919-39364978)
chr8 (21-79)||(29643382-29643440)
chr8 (14-80)||(14056553-14056619)
chr8 (22-81)||(21931696-21931755)
chr8 (25-80)||(25111976-25112031)
chr8 (25-79)||(24320671-24320725)
chr8 (14-45)||(44474691-44474722)
chr8 (17-51)||(23646716-23646750)
chr8 (22-60)||(38184693-38184731)
chr8 (22-59)||(32950917-32950954)
[»] scaffold0025 (1 HSPs)
scaffold0025 (27-212)||(14398-14584)
[»] scaffold0029 (1 HSPs)
scaffold0029 (14-203)||(111758-111948)
[»] scaffold0247 (1 HSPs)
scaffold0247 (14-212)||(11209-11407)
[»] scaffold0924 (1 HSPs)
scaffold0924 (14-203)||(740-930)
[»] scaffold1773 (1 HSPs)
scaffold1773 (17-203)||(1055-1240)
[»] scaffold0058 (1 HSPs)
scaffold0058 (14-205)||(167-356)
[»] scaffold0006 (1 HSPs)
scaffold0006 (17-203)||(50056-50241)
[»] scaffold0117 (2 HSPs)
scaffold0117 (14-202)||(1887-2074)
scaffold0117 (14-202)||(8564-8751)
[»] chr4 (23 HSPs)
chr4 (14-202)||(8045822-8046009)
chr4 (14-203)||(11847984-11848179)
chr4 (25-139)||(53483646-53483759)
chr4 (25-80)||(15408139-15408194)
chr4 (21-81)||(13888641-13888701)
chr4 (22-81)||(8834895-8834954)
chr4 (21-81)||(15245215-15245275)
chr4 (22-79)||(14486661-14486718)
chr4 (21-81)||(15308120-15308180)
chr4 (30-81)||(22724691-22724742)
chr4 (21-55)||(15069781-15069815)
chr4 (21-55)||(15076381-15076415)
chr4 (25-135)||(27906210-27906320)
chr4 (14-45)||(37837767-37837798)
chr4 (14-45)||(42596466-42596497)
chr4 (25-79)||(16146831-16146885)
chr4 (22-60)||(17143255-17143293)
chr4 (22-59)||(3338381-3338418)
chr4 (22-59)||(10705747-10705784)
chr4 (22-59)||(10919517-10919554)
chr4 (22-59)||(14931124-14931161)
chr4 (19-60)||(15747551-15747592)
chr4 (25-81)||(14912081-14912137)
[»] scaffold0090 (1 HSPs)
scaffold0090 (13-205)||(18043-18236)
[»] scaffold0154 (1 HSPs)
scaffold0154 (14-212)||(30724-30923)
[»] scaffold0476 (1 HSPs)
scaffold0476 (22-212)||(3290-3481)
[»] scaffold0077 (1 HSPs)
scaffold0077 (22-212)||(3619-3809)
[»] scaffold0796 (2 HSPs)
scaffold0796 (19-212)||(1727-1917)
scaffold0796 (19-212)||(5750-5940)
[»] scaffold0456 (2 HSPs)
scaffold0456 (20-108)||(904-991)
scaffold0456 (20-108)||(8049-8136)
[»] scaffold0129 (1 HSPs)
scaffold0129 (25-137)||(45275-45386)
[»] scaffold0004 (2 HSPs)
scaffold0004 (21-89)||(116887-116955)
scaffold0004 (26-59)||(60441-60474)
[»] scaffold0222 (1 HSPs)
scaffold0222 (22-89)||(16811-16878)
[»] scaffold0461 (1 HSPs)
scaffold0461 (22-89)||(5-72)
[»] scaffold0310 (1 HSPs)
scaffold0310 (14-80)||(17643-17710)
[»] scaffold0146 (1 HSPs)
scaffold0146 (22-89)||(13623-13690)
[»] scaffold0020 (1 HSPs)
scaffold0020 (22-89)||(101925-101992)
[»] scaffold0107 (2 HSPs)
scaffold0107 (14-80)||(40521-40587)
scaffold0107 (22-59)||(3905-3942)
[»] scaffold0019 (1 HSPs)
scaffold0019 (25-80)||(135473-135528)
[»] scaffold0815 (1 HSPs)
scaffold0815 (14-76)||(1453-1515)
[»] scaffold0235 (1 HSPs)
scaffold0235 (26-78)||(22594-22646)
[»] scaffold0138 (1 HSPs)
scaffold0138 (21-81)||(12296-12356)
[»] scaffold0124 (2 HSPs)
scaffold0124 (25-80)||(34276-34331)
scaffold0124 (25-81)||(35439-35495)
[»] scaffold0139 (1 HSPs)
scaffold0139 (22-80)||(14994-15052)
[»] scaffold0317 (1 HSPs)
scaffold0317 (25-88)||(1378-1441)
[»] scaffold0001 (1 HSPs)
scaffold0001 (25-102)||(493029-493105)
[»] scaffold0609 (1 HSPs)
scaffold0609 (25-109)||(5858-5941)
[»] scaffold2054 (1 HSPs)
scaffold2054 (14-77)||(717-780)
[»] scaffold0335 (1 HSPs)
scaffold0335 (22-81)||(2625-2684)
[»] scaffold0096 (1 HSPs)
scaffold0096 (26-81)||(39508-39563)
[»] scaffold1318 (1 HSPs)
scaffold1318 (25-79)||(1913-1967)
[»] scaffold0348 (1 HSPs)
scaffold0348 (25-79)||(9336-9390)
[»] scaffold0127 (1 HSPs)
scaffold0127 (25-79)||(10239-10293)
[»] scaffold0023 (1 HSPs)
scaffold0023 (25-79)||(135438-135492)
[»] scaffold0790 (1 HSPs)
scaffold0790 (13-53)||(5480-5520)
[»] scaffold0028 (2 HSPs)
scaffold0028 (21-77)||(69749-69805)
scaffold0028 (20-87)||(2053-2120)
[»] scaffold1128 (1 HSPs)
scaffold1128 (14-45)||(529-560)
[»] scaffold0600 (1 HSPs)
scaffold0600 (22-81)||(732-791)
[»] scaffold0298 (1 HSPs)
scaffold0298 (21-60)||(618-657)
[»] scaffold0249 (1 HSPs)
scaffold0249 (25-99)||(13895-13970)
[»] scaffold0180 (1 HSPs)
scaffold0180 (22-74)||(11630-11684)
[»] scaffold0031 (2 HSPs)
scaffold0031 (22-81)||(121902-121961)
scaffold0031 (22-81)||(132778-132837)
[»] scaffold0480 (1 HSPs)
scaffold0480 (22-52)||(1493-1523)
[»] scaffold0429 (1 HSPs)
scaffold0429 (21-59)||(1996-2034)
[»] scaffold0261 (1 HSPs)
scaffold0261 (25-79)||(23570-23624)
[»] scaffold0053 (1 HSPs)
scaffold0053 (25-79)||(79491-79545)
[»] scaffold0956 (1 HSPs)
scaffold0956 (21-66)||(2090-2135)
[»] scaffold0481 (1 HSPs)
scaffold0481 (26-71)||(676-721)
[»] scaffold0273 (1 HSPs)
scaffold0273 (22-59)||(7693-7730)
[»] scaffold0034 (1 HSPs)
scaffold0034 (27-135)||(73229-73337)
[»] scaffold1461 (1 HSPs)
scaffold1461 (21-89)||(1481-1549)
[»] scaffold0453 (1 HSPs)
scaffold0453 (25-109)||(10551-10634)
[»] scaffold0207 (1 HSPs)
scaffold0207 (21-53)||(9679-9711)
[»] scaffold0012 (1 HSPs)
scaffold0012 (21-81)||(222201-222261)


Alignment Details
Target: chr5 (Bit Score: 183; Significance: 5e-99; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 22 - 212
Target Start/End: Complemental strand, 19512444 - 19512254
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagg 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19512444 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagg 19512345  T
Q  122 gtttgatgatgattctgaggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactgttg 212  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19512344 gtttgatgatgattttgaggggaatgggtattgatcatgttaattctattgtaacgtaatgtttagaatgaaaacttaatctatactgttg 19512254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 13 - 212
Target Start/End: Original strand, 38144525 - 38144723
Alignment:
Q  13 attctgcaaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattg 112  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||    
T  38144525 attctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataatttt-ggaaaataaattg 38144623  T
Q  113 agggttagggtttgatgatgattctgaggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactgttg 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38144624 agggttagggtttgatgatgattctgaggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactgttg 38144723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 22 - 212
Target Start/End: Original strand, 28370052 - 28370241
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagg 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  28370052 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaaaataaattgagggttagg 28370150  T
Q  122 gtttgatgatgattctgaggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactgttg 212  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  28370151 gtttgatgatgattttgaggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttg 28370241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 20 - 203
Target Start/End: Complemental strand, 22751201 - 22751018
Alignment:
Q  20 aaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggtta 119  Q
    |||| |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22751201 aaaactaaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggtta 22751103  T
Q  120 gggtttgatgatgattctg-aggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 203  Q
    ||||||||||||||||||| |||| |||||||| |||||||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  22751102 gggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct 22751018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 20 - 202
Target Start/End: Complemental strand, 23528690 - 23528511
Alignment:
Q  20 aaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggtta 119  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||| ||||  |||  ||||    
T  23528690 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatag-ttttggaaaataagatgaaagtta 23528593  T
Q  120 gggtttgatgatgattctgaggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatc 202  Q
    ||||||||||||||||||||  |||||| |||  ||| |||||| || | ||| ||| ||||||| |||| |||| |||||||    
T  23528592 gggtttgatgatgattctga-tggaatgagtaaggatgatgttagttttcttggaatttaatgttaagaacgaaatcttaatc 23528511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 22 - 89
Target Start/End: Original strand, 18407941 - 18408008
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 89  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  18407941 aattaaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattgatctaattg 18408008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 23111196 - 23111264
Alignment:
Q  21 aaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 89  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  23111196 aaattaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23111264  T

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Target: chr5; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 22438736 - 22438803
Alignment:
Q  14 ttctgcaaaat-taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 80  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22438736 ttctgcaaaatctaaggtaagggtgagactatctctcaataatcataatgtataatttctgaaaattg 22438803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 19236954 - 19236900
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 79  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  19236954 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 19236900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 22461210 - 22461158
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 77  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||    
T  22461210 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 22461158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 22467834 - 22467782
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 77  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||    
T  22467834 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 22467782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 42961633 - 42961566
Alignment:
Q  13 attctgcaaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 80  Q
    ||||||||||| ||||||||||||||| ||| |  ||||| || ||||| ||| ||||||||||||||    
T  42961633 attctgcaaaactaaggtaagggtgaggctaaccttcaatgattataatatatgatttctgaaaattg 42961566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 8952037 - 8952075
Alignment:
Q  21 aaattaaggtaagggtgagactatctctcaataatcata 59  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  8952037 aaattaaggtaagggtgaggctaactctcaataatcata 8952075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 20781798 - 20781744
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 79  Q
    ||||||||||||| || ||||| |||||||| ||||| ||| |||||||||||||    
T  20781798 taaggtaagggtgggattatctttcaataattataatatatgatttctgaaaatt 20781744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 59
Target Start/End: Original strand, 22777067 - 22777104
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcata 59  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  22777067 aattaaggtaagggtgaggctaactctcaataatcata 22777104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 135
Target Start/End: Complemental strand, 34830152 - 34830029
Alignment:
Q  11 taattctgcaaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagat-aaa 109  Q
    |||||||||||   ||||||||||||| || ||||| ||||||||  |||| ||||||||||||||||  | ||||| | |||||| || |||||| |||    
T  34830152 taattctgcaattctaaggtaagggtgggattatctttcaataat-ttaatgtataatttctgaaaatcaatctaatagaatagttctt-gaagataaaa 34830055  T
Q  110 ttgagggttagggtttgatgatgatt 135  Q
    |||||  ||||||| ||||| |||||    
T  34830054 ttgagaattagggtatgatgctgatt 34830029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 53
Target Start/End: Original strand, 17021914 - 17021942
Alignment:
Q  25 taaggtaagggtgagactatctctcaata 53  Q
    |||||||||||||||||||||||||||||    
T  17021914 taaggtaagggtgagactatctctcaata 17021942  T

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Target: chr7 (Bit Score: 180; Significance: 3e-97; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 25 - 212
Target Start/End: Complemental strand, 14423039 - 14422852
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtt 124  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14423039 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtt 14422940  T
Q  125 tgatgatgattctgaggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactgttg 212  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  14422939 tgatgatgattctgaggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttg 14422852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 22 - 212
Target Start/End: Complemental strand, 16009634 - 16009445
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagg 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||| |    
T  16009634 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatggtttt-ggaagataaattgtgggttaag 16009536  T
Q  122 gtttgatgatgattctgaggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactgttg 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  16009535 gtttgatgatgattctgaggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttg 16009445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 22 - 203
Target Start/End: Original strand, 10895788 - 10895969
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagg 121  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  10895788 aattaacgtaagggtgagactatctctcaataatcataatctataatttttgaaaattgacctaattgcatagtttttggaagataaattgtgggttagg 10895887  T
Q  122 gtttgatgatgattctgaggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  10895888 gtttgatgatgattctgaggggaatgggtattgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct 10895969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 21 - 203
Target Start/End: Complemental strand, 15168234 - 15168052
Alignment:
Q  21 aaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttag 120  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  15168234 aaattaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttag 15168136  T
Q  121 ggtttgatgatgattctg-aggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 203  Q
    |||||||||||||||||| |||| |||||||| |||||||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  15168135 ggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct 15168052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 20 - 203
Target Start/End: Complemental strand, 18873420 - 18873237
Alignment:
Q  20 aaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggtta 119  Q
    |||| |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  18873420 aaaactaaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggtta 18873322  T
Q  120 gggtttgatgatgattctg-aggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 203  Q
    ||||||||||||||||||| |||| |||||||| |||||||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  18873321 gggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct 18873237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 14 - 203
Target Start/End: Original strand, 12709833 - 12710022
Alignment:
Q  14 ttctgcaaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattga 113  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||| |||||||| |||||||||    
T  12709833 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatttataattcctg-aaattgacctaattgcatag-ttttggaaaataaattga 12709930  T
Q  114 gggttagggtttgatgatgattctg-aggggaatgggtattgatcatgttaattcta-ttgtaatgtaatgtttagaatgaaaacttaatct 203  Q
    |||||||||||||||||||||| || || | |||||||| ||||||||||||||||| ||||||| ||||||| |||||  |||||||||||    
T  12709931 gggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatct 12710022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 14 - 203
Target Start/End: Original strand, 13122904 - 13123093
Alignment:
Q  14 ttctgcaaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattga 113  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||| |||||||| |||||||||    
T  13122904 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatttataattcctg-aaattgacctaattgcatag-ttttggaaaataaattga 13123001  T
Q  114 gggttagggtttgatgatgattctg-aggggaatgggtattgatcatgttaattcta-ttgtaatgtaatgtttagaatgaaaacttaatct 203  Q
    |||||||||||||||||||||| || || | |||||||| ||||||||||||||||| ||||||| ||||||| |||||  |||||||||||    
T  13123002 gggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatct 13123093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 22 - 212
Target Start/End: Complemental strand, 16677353 - 16677161
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagat-aaattgagggttag 120  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  16677353 aattcaggtaagggtgagactatctctcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaaattaagggttag 16677254  T
Q  121 ggtttgatgatgattctgaggggaatgg-gtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactgttg 212  Q
    ||||||||||||||| ||||| | |||| ||| |||||||||||| | | |||||| || ||||| ||||||||  | ||||||||| |||||    
T  16677253 ggtttgatgatgattttgaggaggatggtgtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaattcctaatctataatgttg 16677161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 22 - 212
Target Start/End: Complemental strand, 17651589 - 17651397
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagat-aaattgagggttag 120  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  17651589 aattcaggtaagggtgagactatctctcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaaattaagggttag 17651490  T
Q  121 ggtttgatgatgattctgaggggaatgg-gtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactgttg 212  Q
    ||||||||||||||| ||||| | |||| ||| |||||||||||| | | |||||| || ||||| ||||||||  | ||||||||| |||||    
T  17651489 ggtttgatgatgattttgaggaggatggtgtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaattcctaatctataatgttg 17651397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 14 - 205
Target Start/End: Complemental strand, 13743774 - 13743584
Alignment:
Q  14 ttctgcaaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattga 113  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||| |||||||| |||||||||    
T  13743774 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatttataattcctg-aaattgacctaattgcatag-ttttggaaaataaattga 13743677  T
Q  114 gggttagggtttgatgatgattctg-aggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctat 205  Q
    |||||||||||||||||||||| || || | |||||||| |||||||||||||| | ||||| | |  |||| ||| |||| |||||||||||    
T  13743676 gggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattttcttgtattatgctgttcagattgaagacttaatctat 13743584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 14 - 202
Target Start/End: Original strand, 12590633 - 12590818
Alignment:
Q  14 ttctgcaaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattga 113  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||| ||||  |||    
T  12590633 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatag-ttttggaaaataatatga 12590730  T
Q  114 gggttagggtttgatgatgattctgaggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatc 202  Q
      ||||||||||||||||||||||||  |||||| |||  ||| |||||| || | ||| ||| ||||||| ||||||||| |||||||    
T  12590731 aagttagggtttgatgatgattctga-tggaatgagtaaagatgatgttagttttcttggaatttaatgttaagaatgaaagcttaatc 12590818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 14 - 139
Target Start/End: Complemental strand, 13007497 - 13007374
Alignment:
Q  14 ttctgcaaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattga 113  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||| ||||  |||    
T  13007497 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatag-ttttggaaaataagatga 13007400  T
Q  114 gggttagggtttgatgatgattctga 139  Q
      ||||||||||||||||||||||||    
T  13007399 aagttagggtttgatgatgattctga 13007374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 11382868 - 11382926
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 80  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11382868 aattaaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattg 11382926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 11389345 - 11389403
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 80  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11389345 aattaaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattg 11389403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 21230949 - 21231015
Alignment:
Q  14 ttctgcaaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 80  Q
    |||||||||  ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  21230949 ttctgcaaatctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 21231015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 20311052 - 20311107
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 80  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  20311052 taaggtaagggtgagactatctctcaataatcataacgtataatttctgaaaattg 20311107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 13679548 - 13679485
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaatt 88  Q
    |||||||||||||||||||||| ||||| ||||| || |||||||| |||||||||| ||||||    
T  13679548 taaggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaattgatctaatt 13679485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 79
Target Start/End: Complemental strand, 11311116 - 11311059
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 79  Q
    |||||||||||||||||||||||||||||||||| ||| | || ||||||| ||||||    
T  11311116 aattaaggtaagggtgagactatctctcaataataatagtgtagaatttctaaaaatt 11311059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 46626020 - 46625961
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 81  Q
    ||||||| |||||||||||||| |||||||| || ||||| ||||||||| |||||||||    
T  46626020 aattaagataagggtgagactaactctcaatgattataatatataatttcggaaaattga 46625961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 2971308 - 2971254
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 79  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  2971308 taaggtaagggtgggattatctttcaatagtcataatttataatttctgaaaatt 2971254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 20906462 - 20906516
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 79  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  20906462 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20906516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 52
Target Start/End: Complemental strand, 11304240 - 11304210
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaat 52  Q
    |||||||||||||||||||||||||||||||    
T  11304240 aattaaggtaagggtgagactatctctcaat 11304210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 29181110 - 29181164
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 79  Q
    ||||||||||||| || ||||| |||||| ||||||| | |||||||||||||||    
T  29181110 taaggtaagggtgggattatctttcaatagtcataatatgtaatttctgaaaatt 29181164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 831628 - 831669
Alignment:
Q  19 caaaattaaggtaagggtgagactatctctcaataatcataa 60  Q
    ||||| ||||||||||||||||||| ||||||||||| ||||    
T  831628 caaaactaaggtaagggtgagactaactctcaataattataa 831669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 1196808 - 1196849
Alignment:
Q  19 caaaattaaggtaagggtgagactatctctcaataatcataa 60  Q
    ||||| ||||||||||||||||||| ||||||||||| ||||    
T  1196808 caaaactaaggtaagggtgagactaactctcaataattataa 1196849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 34958619 - 34958578
Alignment:
Q  19 caaaattaaggtaagggtgagactatctctcaataatcataa 60  Q
    ||||| ||||||||||||||||||| ||||||||||| ||||    
T  34958619 caaaactaaggtaagggtgagactaactctcaataattataa 34958578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 59
Target Start/End: Original strand, 40554515 - 40554552
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcata 59  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  40554515 aattaaggtaagggtgaggctaactctcaataatcata 40554552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 13664910 - 13664874
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcat 58  Q
    ||||||||||||||||||||||||| ||||| |||||    
T  13664910 aattaaggtaagggtgagactatctttcaatgatcat 13664874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 31155448 - 31155396
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 77  Q
    ||||||||||||| || ||||| ||||| || ||||| |||||||||||||||    
T  31155448 taaggtaagggtgggattatctttcaatgattataatatataatttctgaaaa 31155396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 180; Significance: 3e-97; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 21 - 212
Target Start/End: Original strand, 20437020 - 20437211
Alignment:
Q  21 aaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttag 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20437020 aaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttag 20437119  T
Q  121 ggtttgatgatgattctgaggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactgttg 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||    
T  20437120 ggtttgatgatgattctgaggggaatgggtattgatcatgttaattatgttgtaatgtaatgttcagaatgaaaacttaatctatactgttg 20437211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 14 - 139
Target Start/End: Complemental strand, 41112100 - 41111977
Alignment:
Q  14 ttctgcaaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattga 113  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||| || ||||  |||    
T  41112100 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatag-ttttgaaaaataagatga 41112003  T
Q  114 gggttagggtttgatgatgattctga 139  Q
      ||||||||||||||||||||||||    
T  41112002 aagttagggtttgatgatgattctga 41111977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 32651631 - 32651563
Alignment:
Q  21 aaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 89  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  32651631 aaattaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 32651563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 18712857 - 18712790
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 89  Q
    |||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  18712857 aattaaggtatgggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 18712790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 19663517 - 19663572
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 80  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  19663517 taaggtaagggtgagactatctctcgataatcatagtatataatttctgaaaattg 19663572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 20805379 - 20805320
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 81  Q
    |||||||||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  20805379 aattaaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 20805320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 11158151 - 11158093
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 80  Q
    |||||||||||||||||||||| |||||||| ||| |||| ||||||||||||||||||    
T  11158151 aattaaggtaagggtgagactaactctcaatgatcttaatatataatttctgaaaattg 11158093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 10811780 - 10811839
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 81  Q
    |||| ||||||||||||||||||||||||||||| ||| | || ||||||||||||||||    
T  10811780 aattcaggtaagggtgagactatctctcaataataatagtgtagaatttctgaaaattga 10811839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 20851133 - 20851187
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 79  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  20851133 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20851187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 20857760 - 20857814
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 79  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  20857760 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20857814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 21706330 - 21706276
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 79  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  21706330 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 21706276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 21710872 - 21710818
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 79  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  21710872 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 21710818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 55
Target Start/End: Complemental strand, 24476384 - 24476350
Alignment:
Q  21 aaattaaggtaagggtgagactatctctcaataat 55  Q
    |||||||||||||||||||||||||||||||||||    
T  24476384 aaattaaggtaagggtgagactatctctcaataat 24476350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 55
Target Start/End: Original strand, 25091415 - 25091448
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataat 55  Q
    ||||||||||||||||||||||||||||||||||    
T  25091415 aattaaggtaagggtgagactatctctcaataat 25091448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 45
Target Start/End: Complemental strand, 11946503 - 11946472
Alignment:
Q  14 ttctgcaaaattaaggtaagggtgagactatc 45  Q
    ||||||||||||||||||||||||||||||||    
T  11946503 ttctgcaaaattaaggtaagggtgagactatc 11946472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 59
Target Start/End: Complemental strand, 18271371 - 18271338
Alignment:
Q  26 aaggtaagggtgagactatctctcaataatcata 59  Q
    |||||||||||||||||| |||||||||||||||    
T  18271371 aaggtaagggtgagactaactctcaataatcata 18271338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 59
Target Start/End: Complemental strand, 18276025 - 18275992
Alignment:
Q  26 aaggtaagggtgagactatctctcaataatcata 59  Q
    |||||||||||||||||| |||||||||||||||    
T  18276025 aaggtaagggtgagactaactctcaataatcata 18275992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 59
Target Start/End: Complemental strand, 18824670 - 18824633
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcata 59  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  18824670 aattaaggtaagggtgaggctaactctcaataatcata 18824633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 43
Target Start/End: Original strand, 43629286 - 43629315
Alignment:
Q  14 ttctgcaaaattaaggtaagggtgagacta 43  Q
    ||||||||||||||||||||||||||||||    
T  43629286 ttctgcaaaattaaggtaagggtgagacta 43629315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 176; Significance: 8e-95; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 25 - 212
Target Start/End: Original strand, 10196 - 10383
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtt 124  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  10196 taaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtt 10295  T
Q  125 tgatgatgattctgaggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactgttg 212  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  10296 tgatgatgattctgaggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttg 10383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 176; Significance: 8e-95; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 25 - 212
Target Start/End: Original strand, 1526 - 1713
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtt 124  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  1526 taaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtt 1625  T
Q  125 tgatgatgattctgaggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactgttg 212  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  1626 tgatgatgattctgaggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttg 1713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 176; Significance: 8e-95; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 21 - 212
Target Start/End: Complemental strand, 23839257 - 23839066
Alignment:
Q  21 aaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttag 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  23839257 aaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtgtttggaagataaattgagggttag 23839158  T
Q  121 ggtttgatgatgattctgaggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactgttg 212  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  23839157 ggtttgatgatgattctaaggggaatgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactgttg 23839066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 22 - 212
Target Start/End: Complemental strand, 4477915 - 4477725
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagg 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  4477915 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagg 4477816  T
Q  122 gtttgatgatgattctgaggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactgttg 212  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  4477815 gtttgatgatgattctgaggggaatgggtattgatcatgctaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttg 4477725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 25 - 212
Target Start/End: Original strand, 10986181 - 10986368
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtt 124  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10986181 taaggtaagggtgagactatctttcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaattgagggttagggtt 10986280  T
Q  125 tgatgatgattctgaggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactgttg 212  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  10986281 tgatgatgattctgaggggaatgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactgttg 10986368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 21 - 203
Target Start/End: Complemental strand, 23057997 - 23057815
Alignment:
Q  21 aaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttag 120  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  23057997 aaattaaggtaagggtgagactatctctcgataatcataatctataattcctgaaaattgacctaattgcatag-ttttggaagataaattgagggttag 23057899  T
Q  121 ggtttgatgatgattctg-aggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 203  Q
    |||||||||||||||||| |||| |||||||| |||||||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  23057898 ggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct 23057815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 14 - 203
Target Start/End: Original strand, 29614136 - 29614325
Alignment:
Q  14 ttctgcaaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattga 113  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| | || |||||||||    
T  29614136 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctagttgcataattttggaaaaataaattga 29614235  T
Q  114 gggttagggtttgatgatgattctg-aggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 203  Q
    |||||||||||||||||||||| || |||| |||||||| |||||||||||||||| ||||| || |||||||||||||||||||||||||    
T  29614236 gggttagggtttgatgatgattatgaagggaaatgggtaatgatcatgttaattctcttgtattg-aatgtttagaatgaaaacttaatct 29614325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 14 - 212
Target Start/End: Complemental strand, 18800503 - 18800305
Alignment:
Q  14 ttctgcaaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagata-aattg 112  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||| |||||    
T  18800503 ttctgcaaaactaatgtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaatagaattg 18800405  T
Q  113 agggttagggtttgatgatgattctgaggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactgttg 212  Q
    ||||||||||||||||||||||||||  ||||||| ||| |||||||||||||||| ||||||||| ||||| | ||||||| ||||||||||| |||||    
T  18800404 agggttagggtttgatgatgattctggagggaatgagtaatgatcatgttaattctgttgtaatgtgatgttcaaaatgaaatcttaatctatattgttg 18800305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 14 - 159
Target Start/End: Original strand, 930085 - 930229
Alignment:
Q  14 ttctgcaaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattga 113  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||| || |||||||||    
T  930085 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgtatag-ttttgaaaaataaattga 930183  T
Q  114 gggttagggtttgatgatgattctgaggggaatgggtattgatcat 159  Q
    ||||||||||||||||||| |||||| ||||||||||| |||||||    
T  930184 gggttagggtttgatgatgtttctgaagggaatgggtaatgatcat 930229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 22 - 212
Target Start/End: Original strand, 21565209 - 21565399
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatc-ataatctataatttctgaaaattgacctaattgcatagtttttggaagataaa-ttgagggtta 119  Q
    |||| |||||||||||||||||||||||| ||||  ||||| | ||||||| |||||||||||||||||| ||   ||  || |||||| ||||||||||    
T  21565209 aattcaggtaagggtgagactatctctcattaatagataatatttaatttcggaaaattgacctaattgcttaacctt--gaggataaaattgagggtta 21565306  T
Q  120 gggtttgatgatgattctgaggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactgttg 212  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||| | ||||||||| | |||  |||||||| |||||||||||||||||    
T  21565307 gggtttgatgatgattctaaggggaatgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactgttg 21565399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 14 - 139
Target Start/End: Complemental strand, 12168428 - 12168305
Alignment:
Q  14 ttctgcaaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattga 113  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||| ||||  |||    
T  12168428 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatag-ttttggaaaataagatga 12168331  T
Q  114 gggttagggtttgatgatgattctga 139  Q
      ||||||||||||||||||||||||    
T  12168330 aagttagggtttgatgatgattctga 12168305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 14 - 139
Target Start/End: Complemental strand, 19287337 - 19287214
Alignment:
Q  14 ttctgcaaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattga 113  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||| ||||  |||    
T  19287337 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatag-ttttggaaaataagatga 19287240  T
Q  114 gggttagggtttgatgatgattctga 139  Q
      ||||||||||||||||||||||||    
T  19287239 aagttagggtttgatgatgattctga 19287214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 14 - 139
Target Start/End: Original strand, 19785859 - 19785982
Alignment:
Q  14 ttctgcaaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattga 113  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||| |||||||| ||||| |||    
T  19785859 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctagttgaatag-ttttggaaaataaaatga 19785956  T
Q  114 gggttagggtttgatgatgattctga 139  Q
      ||||||||||||||||||||||||    
T  19785957 aagttagggtttgatgatgattctga 19785982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 14 - 139
Target Start/End: Complemental strand, 19878521 - 19878398
Alignment:
Q  14 ttctgcaaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattga 113  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||| ||||  |||    
T  19878521 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatag-ttttggaaaataagatga 19878424  T
Q  114 gggttagggtttgatgatgattctga 139  Q
      ||||||||||||||||||||||||    
T  19878423 aagttagggtttgatgatgattctga 19878398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 14 - 139
Target Start/End: Complemental strand, 19884297 - 19884174
Alignment:
Q  14 ttctgcaaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattga 113  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||| ||||  |||    
T  19884297 ttctgcaaaactaaggttagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatag-ttttggaaaataagatga 19884200  T
Q  114 gggttagggtttgatgatgattctga 139  Q
      ||||||||||||||||||||||||    
T  19884199 aagttagggtttgatgatgattctga 19884174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 25 - 139
Target Start/End: Original strand, 34639987 - 34640100
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtt 124  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||| ||||   ||   ||||||||    
T  34639987 taaggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattgacctaattgaatag-ttttggaaaataataagaaaattagggtt 34640085  T
Q  125 tgatgatgattctga 139  Q
    |||||||| ||||||    
T  34640086 tgatgatggttctga 34640100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 25 - 139
Target Start/End: Original strand, 34646661 - 34646774
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtt 124  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||  |||||||| ||||   ||   ||||||||    
T  34646661 taaggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattgacctaattgaata-attttggaaaataataagaaaattagggtt 34646759  T
Q  125 tgatgatgattctga 139  Q
    |||||||| ||||||    
T  34646760 tgatgatggttctga 34646774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 139
Target Start/End: Original strand, 25469705 - 25469816
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtt 124  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| || | |||||||| ||||  |||   ||||||||    
T  25469705 taaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaat-ggttttggaaaataatatgaaaattagggtt 25469801  T
Q  125 tgatgatgattctga 139  Q
    ||||||| |||||||    
T  25469802 tgatgataattctga 25469816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 24512833 - 24512899
Alignment:
Q  14 ttctgcaaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 80  Q
    |||||||||  |||||| |||||||||||||||||||||||||||| | ||||||||||||||||||    
T  24512833 ttctgcaaatctaaggtgagggtgagactatctctcaataatcatagtatataatttctgaaaattg 24512899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 22 - 77
Target Start/End: Complemental strand, 9187553 - 9187498
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 77  Q
    ||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||    
T  9187553 aattaaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaa 9187498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 25348545 - 25348486
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 81  Q
    |||||||||||||||||||||||||||||||||| ||| | || ||||||||||||||||    
T  25348545 aattaaggtaagggtgagactatctctcaataataatagtatagaatttctgaaaattga 25348486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 25397231 - 25397172
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 81  Q
    |||||||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  25397231 aattaaggtaagggtgaggctaactctcgatgatcataatatataatttctgaaaattga 25397172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 25598702 - 25598643
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 81  Q
    |||| ||||||||||||||||| |||||||| |||||||| |||| ||||||||||||||    
T  25598702 aattcaggtaagggtgagactaactctcaatgatcataatatatattttctgaaaattga 25598643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 25 - 109
Target Start/End: Complemental strand, 31252477 - 31252394
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaa 109  Q
    |||||||||||||||| ||||| | ||| || ||||| ||||||||||||||||| | ||||||| |||||| || |||||||||    
T  31252477 taaggtaagggtgagattatcttttaatgattataatatataatttctgaaaattaatctaattgaatagttctt-gaagataaa 31252394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 19471332 - 19471391
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 81  Q
    |||||||||||||||||| ||| ||||| || |||||||| ||||||||||| |||||||    
T  19471332 aattaaggtaagggtgaggctacctctcgatgatcataatatataatttctggaaattga 19471391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 24441711 - 24441673
Alignment:
Q  21 aaattaaggtaagggtgagactatctctcaataatcata 59  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  24441711 aaattaaggtaagggtgagactaactctcaataatcata 24441673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 59
Target Start/End: Complemental strand, 18659487 - 18659450
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcata 59  Q
    |||||||||||||||||||||| |||||||||||||||    
T  18659487 aattaaggtaagggtgagactaactctcaataatcata 18659450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 2286764 - 2286823
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 81  Q
    |||| ||||||||||||||||| |||||||| ||  |||| ||||| |||||||||||||    
T  2286764 aattcaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattga 2286823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 52
Target Start/End: Complemental strand, 12943182 - 12943152
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaat 52  Q
    |||||||||||||||||||||||||||||||    
T  12943182 aattaaggtaagggtgagactatctctcaat 12943152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 15458544 - 15458468
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctg--aaaattgacctaattgcatagttttt 99  Q
    ||||||||||||| || ||||| ||||| || ||||| |||||||||||  |||||| | ||||||| |||||||||    
T  15458544 taaggtaagggtgggattatctttcaatgattataatatataatttctgaaaaaattaatctaattgaatagttttt 15458468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 15465139 - 15465063
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctg--aaaattgacctaattgcatagttttt 99  Q
    ||||||||||||| || ||||| ||||| || ||||| |||||||||||  |||||| | ||||||| |||||||||    
T  15465139 taaggtaagggtgggattatctttcaatgattataatatataatttctgaaaaaattaatctaattgaatagttttt 15465063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 11288669 - 11288721
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 77  Q
    ||||||||||||| || ||||| ||||| ||| |||| |||||||||||||||    
T  11288669 taaggtaagggtgggattatctttcaatgatcttaatatataatttctgaaaa 11288721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 176; Significance: 8e-95; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 25 - 212
Target Start/End: Original strand, 23370506 - 23370693
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtt 124  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  23370506 taaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtt 23370605  T
Q  125 tgatgatgattctgaggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactgttg 212  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  23370606 tgatgatgattctgaggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttg 23370693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 22 - 212
Target Start/End: Complemental strand, 9534385 - 9534196
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagg 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  9534385 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaaaataaattgagggttagg 9534287  T
Q  122 gtttgatgatgattctgaggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactgttg 212  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  9534286 gtttgatgatgattctgagtggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttg 9534196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 27 - 212
Target Start/End: Complemental strand, 24193009 - 24192823
Alignment:
Q  27 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttg 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24193009 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttg 24192910  T
Q  127 atgatgattctg-aggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactgttg 212  Q
    |||||||||||| |||| |||||||| |||||||||||||||| ||||||||| ||||| |||||||||||||||||||| ||||||    
T  24192909 atgatgattctgaagggaaatgggtaatgatcatgttaattctgttgtaatgtgatgttcagaatgaaaacttaatctatgctgttg 24192823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 21 - 203
Target Start/End: Original strand, 14762754 - 14762936
Alignment:
Q  21 aaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttag 120  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  14762754 aaattaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttag 14762852  T
Q  121 ggtttgatgatgattctg-aggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 203  Q
    |||||||||||||||||| |||| |||||||| |||||||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  14762853 ggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct 14762936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 22 - 203
Target Start/End: Original strand, 20247786 - 20247967
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagg 121  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  20247786 aattcaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttagg 20247884  T
Q  122 gtttgatgatgattctg-aggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 203  Q
    ||||||||||||||||| |||| |||||||| |||||||||||||| | ||||||| ||||||| ||||||||||||||||||    
T  20247885 gtttgatgatgattctgaagggaaatgggtaatgatcatgttaattttcttgtaatataatgttcagaatgaaaacttaatct 20247967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 22 - 203
Target Start/End: Original strand, 38310797 - 38310978
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagg 121  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  38310797 aattcaggtaagggtgagactatctctcgataatcataatctataatttctgaatattgacctaattgcatag-ttttggaagataaattgagggttagg 38310895  T
Q  122 gtttgatgatgattctg-aggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 203  Q
    ||||||||||||||||| |||| |||||||| |||||||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  38310896 gtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct 38310978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 14 - 206
Target Start/End: Original strand, 16801457 - 16801648
Alignment:
Q  14 ttctgcaaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagat-aaattg 112  Q
    |||||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||| ||| |||| |||||| ||||||    
T  16801457 ttctgcaaaactaaggtaagggtgagactatctctcaataatcat-atatataatttctgaaaattgacctgattgcttagctttt-gaagataaaattg 16801554  T
Q  113 agggttagggtttgatgatgattctgaggggaatgg-gtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctata 206  Q
    | |||||||| |||||||||||| ||||| |||||| ||| |||||||||||| | |  |||||||| ||||||||||||||  ||||| |||||    
T  16801555 aaggttaggg-ttgatgatgattttgaggagaatggtgtaatgatcatgttaaatatgctgtaatgtgatgtttagaatgaattcttaacctata 16801648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 22 - 212
Target Start/End: Original strand, 55499099 - 55499290
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatc-ataatctataatttctg-aaaattgacctaattgcatagtttttggaagataaa-ttgagggtt 118  Q
    |||| |||||||||||||||||||||||| ||||  ||||| | ||||||| | ||||||||||||| ||| ||   ||  || |||||| |||||||||    
T  55499099 aattcaggtaagggtgagactatctctcattaatagataatatgtaatttcgggaaaattgacctaactgcttaacctt--gaggataaaattgagggtt 55499196  T
Q  119 agggtttgatgatgattctgaggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactgttg 212  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||| |||||  |||||||| |||||||||||| ||||    
T  55499197 agggtttgatgatgattctgaggggaatgggtaatgatcatgttaattatgttgtaatgtgatgttcggaatgaaatcttaatctatacagttg 55499290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 25 - 202
Target Start/End: Original strand, 24933829 - 24934003
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtt 124  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||| ||||  |||   ||||||||    
T  24933829 taaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatag-ttttggaaaataatatgaaaattagggtt 24933926  T
Q  125 tgatgatgattctgaggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatc 202  Q
    |||||||||||||||  |||||| |||  ||| |||||| || | | | ||| ||||||| ||||||||| |||||||    
T  24933927 tgatgatgattctga-tggaatgagtaaagatgatgttagttttctcggaatttaatgttaagaatgaaagcttaatc 24934003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 202
Target Start/End: Original strand, 41455087 - 41455272
Alignment:
Q  14 ttctgcaaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattga 113  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||| |||   |||    
T  41455087 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa-ttgacctaattgaatagtttt-ggaaaataggatga 41455184  T
Q  114 gggttagggtttgatgatgattctgaggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatc 202  Q
       |||||| ||||||||||||||||  |||||| |||  ||| |||||| || | ||| ||| ||||||  ||||||||| |||||||    
T  41455185 aaattagggattgatgatgattctga-tggaatgagtaaagatgatgttagttttcttgaaatttaatgtcaagaatgaaatcttaatc 41455272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 18929303 - 18929239
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaa 86  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||    
T  18929303 aattaaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatctaa 18929239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 22 - 89
Target Start/End: Original strand, 17240510 - 17240577
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 89  Q
    ||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||| |||||||    
T  17240510 aattaaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 17240577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 13302241 - 13302295
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 79  Q
    |||||||||||||||| ||||| |||||||||||||| | |||||||||||||||    
T  13302241 taaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 13302295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 13323788 - 13323842
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 79  Q
    |||||||||||||||| ||||| |||||||||||||| | |||||||||||||||    
T  13323788 taaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 13323842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 25 - 139
Target Start/End: Original strand, 10389444 - 10389557
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaag-ataaattgagggttagggt 123  Q
    ||||||||||||| || ||||| ||||| || ||||| ||||||||||||||| | | ||||||| |||||||||  ||| ||||  |||   |||||||    
T  10389444 taaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagttttt--aagaataatatgaaaattagggt 10389541  T
Q  124 ttgatgatgattctga 139  Q
    ||||||||||||||||    
T  10389542 ttgatgatgattctga 10389557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 25 - 139
Target Start/End: Original strand, 10414533 - 10414646
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaag-ataaattgagggttagggt 123  Q
    ||||||||||||| || ||||| ||||| || ||||| ||||||||||||||| | | ||||||| |||||||||  ||| ||||  |||   |||||||    
T  10414533 taaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagttttt--aagaataatatgaaaattagggt 10414630  T
Q  124 ttgatgatgattctga 139  Q
    ||||||||||||||||    
T  10414631 ttgatgatgattctga 10414646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 25 - 139
Target Start/End: Original strand, 10421203 - 10421316
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaag-ataaattgagggttagggt 123  Q
    ||||||||||||| || ||||| ||||| || ||||| ||||||||||||||| | | ||||||| |||||||||  ||| ||||  |||   |||||||    
T  10421203 taaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagttttt--aagaataatatgaaaattagggt 10421300  T
Q  124 ttgatgatgattctga 139  Q
    ||||||||||||||||    
T  10421301 ttgatgatgattctga 10421316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 12033445 - 12033499
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 79  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  12033445 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 12033499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 13312897 - 13312951
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 79  Q
    |||||||||||||||| ||||| |||||||||||||| | |||||| ||||||||    
T  13312897 taaggtaagggtgagattatctttcaataatcataatatgtaatttttgaaaatt 13312951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 17131786 - 17131732
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 79  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  17131786 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 17131732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 51301643 - 51301589
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 79  Q
    |||||||||||||||| |||||  ||||||||||||| | |||||||||||||||    
T  51301643 taaggtaagggtgagattatcttccaataatcataatatgtaatttctgaaaatt 51301589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 16801086 - 16801027
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 81  Q
    |||| ||||||||||||||||| |||||||| ||  |||| ||||| |||||||||||||    
T  16801086 aattcaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattga 16801027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 52
Target Start/End: Complemental strand, 3803866 - 3803836
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaat 52  Q
    |||||||||||||||||||||||||||||||    
T  3803866 aattaaggtaagggtgagactatctctcaat 3803836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 52
Target Start/End: Complemental strand, 12306115 - 12306085
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaat 52  Q
    |||||||||||||||||||||||||||||||    
T  12306115 aattaaggtaagggtgagactatctctcaat 12306085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 14865900 - 14865846
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 79  Q
    ||||||||||||| || ||||| |||||| ||||||| | |||||||||||||||    
T  14865900 taaggtaagggtgggattatctttcaatagtcataatatgtaatttctgaaaatt 14865846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 59
Target Start/End: Original strand, 23392820 - 23392854
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcata 59  Q
    ||||||||||||||||||| |||||||||||||||    
T  23392820 taaggtaagggtgagactaactctcaataatcata 23392854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 59
Target Start/End: Original strand, 52337953 - 52337990
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcata 59  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  52337953 aattaaggtaagggtgaggctaactctcaataatcata 52337990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 172; Significance: 2e-92; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 25 - 212
Target Start/End: Complemental strand, 111740 - 111554
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtt 124  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  111740 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaaaataaattgagggttagggtt 111642  T
Q  125 tgatgatgattctgaggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactgttg 212  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  111641 tgatgatgattctgaggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttg 111554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 14 - 203
Target Start/End: Original strand, 11840 - 12029
Alignment:
Q  14 ttctgcaaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattga 113  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  11840 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaaaataaattga 11938  T
Q  114 gggttagggtttgatgatgattctg-aggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 203  Q
    | ||||||||||||||||||||||| |||| |||||||| |||||||||||||||| ||||||| |||| || ||||||||||||||||||    
T  11939 gagttagggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatcttcagaatgaaaacttaatct 12029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 168; Significance: 5e-90; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 21 - 212
Target Start/End: Complemental strand, 6483776 - 6483586
Alignment:
Q  21 aaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttag 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  6483776 aaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaaaataaattgagggttag 6483678  T
Q  121 ggtttgatgatgattctgaggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactgttg 212  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  6483677 ggtttgatgatgattttgaggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttg 6483586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 21 - 212
Target Start/End: Complemental strand, 6487243 - 6487053
Alignment:
Q  21 aaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttag 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  6487243 aaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaaaataaattgagggttag 6487145  T
Q  121 ggtttgatgatgattctgaggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactgttg 212  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  6487144 ggtttgatgatgattttgaggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttg 6487053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 21 - 212
Target Start/End: Original strand, 19661450 - 19661640
Alignment:
Q  21 aaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttag 120  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  19661450 aaattaaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaagataaattgagggttag 19661548  T
Q  121 ggtttgatgatgattctgaggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactgttg 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  19661549 ggtttgatgatgattctgaggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttg 19661640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 14 - 212
Target Start/End: Complemental strand, 26583892 - 26583696
Alignment:
Q  14 ttctgcaaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattga 113  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||    
T  26583892 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa-ttgacctaattgcatagtttt-ggaaaataaattga 26583795  T
Q  114 gggttagggtttgatgatgattctgaggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactgttg 212  Q
    ||||||||| |||||||||||||||||||||| ||||| |||||||||||| | | |||||| || ||||| ||||||||  | ||||||||| |||||    
T  26583794 gggttagggcttgatgatgattctgaggggaaagggtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaattcctaatctataatgttg 26583696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 22 - 212
Target Start/End: Original strand, 23101460 - 23101650
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatc-ataatctataatttctgaaaattgacctaattgcatagtttttggaagataaa-ttgagggtta 119  Q
    ||||||||||||||||||||||||||||| ||||  ||||| | ||||||| |||||||||||||||||  ||   ||  || |||||| ||||||||||    
T  23101460 aattaaggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgtttaacctt--gaggataaaattgagggtta 23101557  T
Q  120 gggtttgatgatgattctgaggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactgttg 212  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||| | |||  |||||||| |||||||||||||||||    
T  23101558 gggtttgatgatgattctgaggggaatgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactgttg 23101650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 22 - 212
Target Start/End: Original strand, 23089052 - 23089242
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatc-ataatctataatttctgaaaattgacctaattgcatagtttttggaagataaa-ttgagggtta 119  Q
    |||| |||||||||||||||||||||||| ||||  ||||| | ||||||| |||||||||||||||||| ||   ||  || |||||| ||||||||||    
T  23089052 aattcaggtaagggtgagactatctctcattaatagataatatttaatttcggaaaattgacctaattgcttaacctt--gaggataaaattgagggtta 23089149  T
Q  120 gggtttgatgatgattctgaggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactgttg 212  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||| | ||||||||| | |||  |||||||| |||||||||||||||||    
T  23089150 gggtttgatgatgattctaaggggaatgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactgttg 23089242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 27 - 212
Target Start/End: Complemental strand, 23879060 - 23878876
Alignment:
Q  27 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagat-aaattgagggttagggttt 125  Q
    |||||||||||||||||||||||| |||| || || |||||||||  ||||||||||||||||| ||   ||  || ||| ||||||||||||||||||     
T  23879060 aggtaagggtgagactatctctcattaataattatatataatttcgaaaaattgacctaattgcttaacctt--gaggattaaattgagggttagggtt- 23878964  T
Q  126 gatgatgattctgaggggaatggg-tattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactgttg 212  Q
    | |||||||||||||||||||||| || |||||||||||||| | ||||||||| ||||| ||||||||| |||||||||||||||||    
T  23878963 gttgatgattctgaggggaatggggtaatgatcatgttaattatgttgtaatgtgatgttcagaatgaaatcttaatctatactgttg 23878876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 25 - 139
Target Start/End: Original strand, 5706024 - 5706137
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtt 124  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||| |||||||||| || ||||  |||   ||||||||    
T  5706024 taaggtaagggtgagactatctctcattaatcataatctataattcctg-aaattgacctaattgaatagtttttgaaaaataatatgaaaattagggtt 5706122  T
Q  125 tgatgatgattctga 139  Q
    |||||||||||||||    
T  5706123 tgatgatgattctga 5706137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 23265200 - 23265133
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 89  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  23265200 aattaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23265133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 23280268 - 23280201
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 89  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  23280268 aattaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23280201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 21908417 - 21908353
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaa 86  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||    
T  21908417 aattaaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatctaa 21908353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 24661635 - 24661576
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 81  Q
    |||||||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  24661635 aattaaggtaagggtgaggctaactctcgatgatcataatatataatttctgaaaattga 24661576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 10631 - 10577
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 79  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  10631 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 10577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 25180930 - 25180984
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 79  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  25180930 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 25180984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 123
Target Start/End: Complemental strand, 26885236 - 26885139
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggt 123  Q
    ||||||||||||| || ||||| ||||||||| |||| ||||||||||||||||| | ||||| | |||||| |||||  | ||||||||  |||||||    
T  26885236 taaggtaagggtgggattatctttcaataatc-taatgtataatttctgaaaattaatctaatggaatagttcttggagaaaaaattgagaattagggt 26885139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 23168299 - 23168351
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 77  Q
    ||||||||||||| || ||||| ||| | |||||||| |||||||||||||||    
T  23168299 taaggtaagggtgggattatctttcattgatcataatgtataatttctgaaaa 23168351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 23579556 - 23579608
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 77  Q
    ||||||||||||| || ||||| ||| | |||||||| |||||||||||||||    
T  23579556 taaggtaagggtgggattatctttcattgatcataatgtataatttctgaaaa 23579608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 164; Significance: 1e-87; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 25 - 212
Target Start/End: Complemental strand, 44477677 - 44477491
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtt 124  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  44477677 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaaaataaattgagggttagggtt 44477579  T
Q  125 tgatgatgattctgaggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactgttg 212  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  44477578 tgatgatgattttgaggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttg 44477491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 25 - 212
Target Start/End: Complemental strand, 44492835 - 44492649
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtt 124  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  44492835 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaaaataaattgagggttagggtt 44492737  T
Q  125 tgatgatgattctgaggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactgttg 212  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  44492736 tgatgatgattttgaggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttg 44492649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 22 - 212
Target Start/End: Original strand, 8727730 - 8727920
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagg 121  Q
    |||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8727730 aattcaggtaagggtgagattatccctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagg 8727829  T
Q  122 gtttgatgatgattctgaggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactgttg 212  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  8727830 gtttgacgatgattctgaggggtatgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactgttg 8727920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 14 - 203
Target Start/End: Complemental strand, 23866680 - 23866491
Alignment:
Q  14 ttctgcaaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattga 113  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||| |||||||| |||||||||    
T  23866680 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatttataattcctg-aaattgacctaattgcatag-ttttggaaaataaattga 23866583  T
Q  114 gggttagggtttgatgatgattctg-aggggaatgggtattgatcatgttaattcta-ttgtaatgtaatgtttagaatgaaaacttaatct 203  Q
    |||||||||||||||||||||| || || | |||||||| ||||||||||||||||| ||||||| ||||||| |||||  |||||||||||    
T  23866582 gggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatct 23866491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 13 - 212
Target Start/End: Original strand, 27940840 - 27941041
Alignment:
Q  13 attctgcaaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataa--at 110  Q
    ||||||||||| ||||||||||||||| ||| |  ||||| || ||||| ||| ||||||||||||||    | | | || ||| ||| || ||||  ||    
T  27940840 attctgcaaaactaaggtaagggtgaggctaaccttcaatgattataatatatgatttctgaaaattgtttgattagaattgttcttgaaaaataagaat 27940939  T
Q  111 tgagggttagggtttgatgatgattctgaggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactgt 210  Q
    || |  |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||    
T  27940940 tgggaattagggtttgatgatgattctgaggggaatgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaatttaatctatactgt 27941039  T
Q  211 tg 212  Q
    ||    
T  27941040 tg 27941041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 14 - 139
Target Start/End: Complemental strand, 17054656 - 17054533
Alignment:
Q  14 ttctgcaaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattga 113  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||| |||||||| ||||  |||    
T  17054656 ttctgcaaaaccaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatag-ttttggaaaataagatga 17054559  T
Q  114 gggttagggtttgatgatgattctga 139  Q
      ||||||||||||||||||||||||    
T  17054558 aagttagggtttgatgatgattctga 17054533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 23482049 - 23482117
Alignment:
Q  21 aaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 89  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  23482049 aaattaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23482117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 21 - 135
Target Start/End: Complemental strand, 18614331 - 18614217
Alignment:
Q  21 aaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagat-aaattgagggtta 119  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| | ||||| || ||| || |||||| ||||||||  |||    
T  18614331 aaattaaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatccaattgaattgttctt-gaagataaaattgagaatta 18614233  T
Q  120 gggtttgatgatgatt 135  Q
    |||||| ||| |||||    
T  18614232 gggttttatgctgatt 18614217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 39364978 - 39364919
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 81  Q
    |||||||||||||||||||||||||||||||||| ||| | || ||||||||||||||||    
T  39364978 aattaaggtaagggtgagactatctctcaataataatagtatagaatttctgaaaattga 39364919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 29643382 - 29643440
Alignment:
Q  21 aaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 79  Q
    |||||||||||||||||||| ||||| |||||||||||||| | |||||||||||||||    
T  29643382 aaattaaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 29643440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 14056553 - 14056619
Alignment:
Q  14 ttctgcaaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 80  Q
    |||||||||  ||||||||||||||||||||||||||||||| ||| | | ||| ||||||||||||    
T  14056553 ttctgcaaatctaaggtaagggtgagactatctctcaataataatagtatgtaaattctgaaaattg 14056619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 21931755 - 21931696
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 81  Q
    |||||||||||||||||| ||| |||||||| || ||||| ||||| |||||||||||||    
T  21931755 aattaaggtaagggtgaggctaactctcaatgattataatatataacttctgaaaattga 21931696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 25112031 - 25111976
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 80  Q
    ||||||||||||||||||||||||||||||| ||| | | ||| ||||||||||||    
T  25112031 taaggtaagggtgagactatctctcaataataatagtatgtaaattctgaaaattg 25111976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 24320671 - 24320725
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 79  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  24320671 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 24320725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 45
Target Start/End: Original strand, 44474691 - 44474722
Alignment:
Q  14 ttctgcaaaattaaggtaagggtgagactatc 45  Q
    ||||||||||||||||||||||||||||||||    
T  44474691 ttctgcaaaattaaggtaagggtgagactatc 44474722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 51
Target Start/End: Original strand, 23646716 - 23646750
Alignment:
Q  17 tgcaaaattaaggtaagggtgagactatctctcaa 51  Q
    ||||||||||||| |||||||||||||||||||||    
T  23646716 tgcaaaattaaggcaagggtgagactatctctcaa 23646750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 60
Target Start/End: Original strand, 38184693 - 38184731
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcataa 60  Q
    |||||||||||||||||||||| ||||||||||| ||||    
T  38184693 aattaaggtaagggtgagactaactctcaataattataa 38184731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 59
Target Start/End: Complemental strand, 32950954 - 32950917
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcata 59  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  32950954 aattaaggtaagggtgaggctaactctcaataatcata 32950917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 151; Significance: 6e-80; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 27 - 212
Target Start/End: Original strand, 14398 - 14584
Alignment:
Q  27 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttg 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14398 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttg 14497  T
Q  127 atgatgattctg-aggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactgttg 212  Q
    |||||||||||| |||| |||||||| |||||||||||||||| ||||||||| |||||  ||||||||||||||||||| ||||||    
T  14498 atgatgattctgaagggaaatgggtaatgatcatgttaattctgttgtaatgtgatgttccgaatgaaaacttaatctatgctgttg 14584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 144; Significance: 1e-75; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 14 - 203
Target Start/End: Complemental strand, 111948 - 111758
Alignment:
Q  14 ttctgcaaaattaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaaattgacctaattgcatagtttttggaagataaattg 112  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  111948 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaaattgacctaattgcatag-ttttggaagataaattg 111850  T
Q  113 agggttagggtttgatgatgattctg-aggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 203  Q
    |||||||||||||||||||||||||| |||| |||||||| |||||||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  111849 agggttagggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct 111758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 14 - 212
Target Start/End: Complemental strand, 11407 - 11209
Alignment:
Q  14 ttctgcaaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagata-aattg 112  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||| |||||    
T  11407 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaatagaattg 11309  T
Q  113 agggttagggtttgatgatgattctgaggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactgttg 212  Q
    ||||||||||||||||||||||||||  ||||||| ||| |||||||||||||||| ||||||||| ||||| | ||||||| ||||||| |||||||||    
T  11308 agggttagggtttgatgatgattctggagggaatgagtaatgatcatgttaattctgttgtaatgtgatgttcaaaatgaaatcttaatccatactgttg 11209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 131; Significance: 6e-68; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 14 - 203
Target Start/End: Original strand, 740 - 930
Alignment:
Q  14 ttctgcaaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattga 113  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  740 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaaaataaattga 839  T
Q  114 gggttagggtttgatgatgattctg-aggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 203  Q
    ||||||||||||||||| |||| || |||| |||||||| |||||||| |||| || ||||||| ||||||| || || ||||||||||||    
T  840 gggttagggtttgatgaggattatgaagggaaatgggtaatgatcatgataatactcttgtaatataatgttcaggataaaaacttaatct 930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 124; Significance: 8e-64; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 17 - 203
Target Start/End: Complemental strand, 1240 - 1055
Alignment:
Q  17 tgcaaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgaggg 116  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||| ||||||||||||    
T  1240 tgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgcatag-ttttggaaaataaattgaggg 1143  T
Q  117 ttagggtttgatgatgattctg-aggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 203  Q
    |||||||||||||| |||| || |||| |||||||| |||||||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  1142 ttagggtttgatgaggattatgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct 1055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 124; Significance: 8e-64; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 14 - 205
Target Start/End: Complemental strand, 356 - 167
Alignment:
Q  14 ttctgcaaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattga 113  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||    
T  356 ttctgcaaaactaaggtaagggtgagactatctctcaataaccataatctataatttctgaaa-ttgacctaattgcatagtttt-ggaaaataaattga 259  T
Q  114 gggttagggtttgatgatgattctgaggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctat 205  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| | ||||| | |  |||| ||| |||| |||||||||||    
T  258 gggttagggtttgatgatgattctgaggggaatgggtaatgatcatgttaattttcttgtattatggtgttcagattgaagacttaatctat 167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 124; Significance: 8e-64; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 17 - 203
Target Start/End: Complemental strand, 50241 - 50056
Alignment:
Q  17 tgcaaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgaggg 116  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||| ||||||||||||    
T  50241 tgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgcatag-ttttggaaaataaattgaggg 50144  T
Q  117 ttagggtttgatgatgattctg-aggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 203  Q
    |||||||||||||| |||| || |||| |||||||| |||||||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  50143 ttagggtttgatgaggattatgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct 50056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 114; Significance: 8e-58; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 14 - 202
Target Start/End: Original strand, 1887 - 2074
Alignment:
Q  14 ttctgcaaaattaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaaattgacctaattgcatagtttttggaagataaattg 112  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |||| |||||||| |||| |||    
T  1887 ttctgcaaaactaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaaattgacctaattgtatag-ttttggaaaataatttg 1985  T
Q  113 agggttagggtttgatgatgattctgaggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatc 202  Q
    ||||||||||||||||||||||| |||  |||||||||| |||| ||||||||||| ||||||| ||||||| | |||||||||||||||    
T  1986 agggttagggtttgatgatgattttga-tggaatgggtaatgattatgttaattctcttgtaatttaatgttcataatgaaaacttaatc 2074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 14 - 202
Target Start/End: Original strand, 8564 - 8751
Alignment:
Q  14 ttctgcaaaattaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaaattgacctaattgcatagtttttggaagataaattg 112  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |||| |||||||| |||| |||    
T  8564 ttctgcaaaactaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaaattgacctaattgtatag-ttttggaaaataatttg 8662  T
Q  113 agggttagggtttgatgatgattctgaggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatc 202  Q
    ||||||||||||||||||||||| |||  |||||||||| |||| ||||||||||| ||||||| ||||||| | |||||||||||||||    
T  8663 agggttagggtttgatgatgattatga-tggaatgggtaatgattatgttaattctcttgtaatttaatgttcaaaatgaaaacttaatc 8751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 114; Significance: 8e-58; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 14 - 202
Target Start/End: Original strand, 8045822 - 8046009
Alignment:
Q  14 ttctgcaaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattga 113  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||    
T  8045822 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctg-aaattgacctaattgcatag-ttttggaaaataaattga 8045919  T
Q  114 gggttagggtttgatgatgattctg-aggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatc 202  Q
    |||||||||||||| ||  |||||| |||| ||||||||  ||| ||||||||||| ||||||| ||||||| |||||||||||||||||    
T  8045920 gggttagggtttgacgagaattctgaagggaaatgggtaaagataatgttaattctcttgtaatataatgttcagaatgaaaacttaatc 8046009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 14 - 203
Target Start/End: Complemental strand, 11848179 - 11847984
Alignment:
Q  14 ttctgcaaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttt-----tggaagataa 108  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||        || || |    
T  11848179 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaatca 11848080  T
Q  109 attgagggttagggtttgatgatgattctg-aggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 203  Q
    |||||||||||||||||||||| ||||||| || |||||||||| ||||||||||||| || || |||| ||||||| ||||||||||||||||||    
T  11848079 attgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatccttttataatataatgttcagaatgaaaacttaatct 11847984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 25 - 139
Target Start/End: Complemental strand, 53483759 - 53483646
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtt 124  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||| || ||||  |||   ||||||||    
T  53483759 taaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagtttttgaaaaataatatgaaaattagggtt 53483661  T
Q  125 tgatgatgattctga 139  Q
    |||||||||||||||    
T  53483660 tgatgatgattctga 53483646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 15408194 - 15408139
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 80  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  15408194 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 15408139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 13888701 - 13888641
Alignment:
Q  21 aaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 81  Q
    ||||||||||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  13888701 aaattaaggtaagggtgaggctaactctcaatgatcataatgtataatttctgaaaattga 13888641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 8834954 - 8834895
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 81  Q
    |||||||||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  8834954 aattaaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 8834895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 15245275 - 15245215
Alignment:
Q  21 aaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 81  Q
    ||||||||||||||||||| ||| |||||||| ||| |||| |||||||||||||||||||    
T  15245275 aaattaaggtaagggtgaggctaactctcaatgatcgtaatatataatttctgaaaattga 15245215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 79
Target Start/End: Complemental strand, 14486718 - 14486661
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 79  Q
    |||| |||||||||||||||||||  ||||| |||||||| |||||||||||||||||    
T  14486718 aattcaggtaagggtgagactatccttcaatgatcataatatataatttctgaaaatt 14486661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 15308180 - 15308120
Alignment:
Q  21 aaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 81  Q
    |||||||| |||||||||| ||| |||||||| ||| |||| |||||||||||||||||||    
T  15308180 aaattaagttaagggtgaggctaactctcaatgatcgtaatatataatttctgaaaattga 15308120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 81
Target Start/End: Original strand, 22724691 - 22724742
Alignment:
Q  30 taagggtgagactatctctcaataatcataatctataatttctgaaaattga 81  Q
    |||||||||||||||||||||||||| ||| | || ||||||||||||||||    
T  22724691 taagggtgagactatctctcaataataatagtatagaatttctgaaaattga 22724742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 55
Target Start/End: Complemental strand, 15069815 - 15069781
Alignment:
Q  21 aaattaaggtaagggtgagactatctctcaataat 55  Q
    |||||||||||||||||||||||||||||||||||    
T  15069815 aaattaaggtaagggtgagactatctctcaataat 15069781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 55
Target Start/End: Complemental strand, 15076415 - 15076381
Alignment:
Q  21 aaattaaggtaagggtgagactatctctcaataat 55  Q
    |||||||||||||||||||||||||||||||||||    
T  15076415 aaattaaggtaagggtgagactatctctcaataat 15076381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 135
Target Start/End: Complemental strand, 27906320 - 27906210
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagat-aaattgagggttagggt 123  Q
    |||| |||||||| || ||||| ||||| |||||||| ||||||||||||||||| |  |||| | |||||| || |||||| ||||||||  |||||||    
T  27906320 taagataagggtgggattatctttcaatgatcataatgtataatttctgaaaattaatataatagaatagttctt-gaagataaaattgagaattagggt 27906222  T
Q  124 ttgatgatgatt 135  Q
     ||||| |||||    
T  27906221 gtgatgttgatt 27906210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 45
Target Start/End: Original strand, 37837767 - 37837798
Alignment:
Q  14 ttctgcaaaattaaggtaagggtgagactatc 45  Q
    ||||||||||||||||||||||||||||||||    
T  37837767 ttctgcaaaattaaggtaagggtgagactatc 37837798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 45
Target Start/End: Original strand, 42596466 - 42596497
Alignment:
Q  14 ttctgcaaaattaaggtaagggtgagactatc 45  Q
    ||||||||||||||||||||||||||||||||    
T  42596466 ttctgcaaaattaaggtaagggtgagactatc 42596497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 16146831 - 16146885
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 79  Q
    ||||||||||||| || ||||| |||||| ||||||| | |||||||||||||||    
T  16146831 taaggtaagggtgggattatctttcaatagtcataatatgtaatttctgaaaatt 16146885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 60
Target Start/End: Complemental strand, 17143293 - 17143255
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcataa 60  Q
    |||||||||||||||||||||| ||||||||||| ||||    
T  17143293 aattaaggtaagggtgagactaactctcaataattataa 17143255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 59
Target Start/End: Complemental strand, 3338418 - 3338381
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcata 59  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  3338418 aattaaggtaagggtgaggctaactctcaataatcata 3338381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 59
Target Start/End: Complemental strand, 10705784 - 10705747
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcata 59  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  10705784 aattaaggtaagggtaagactaactctcaataatcata 10705747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 59
Target Start/End: Complemental strand, 10919554 - 10919517
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcata 59  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  10919554 aattaaggtaagggtaagactaactctcaataatcata 10919517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 59
Target Start/End: Original strand, 14931124 - 14931161
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcata 59  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  14931124 aattaaggtaagggtgaggctaactctcaataatcata 14931161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 15747551 - 15747592
Alignment:
Q  19 caaaattaaggtaagggtgagactatctctcaataatcataa 60  Q
    ||||| ||||||||||||||||||| ||||||||||| ||||    
T  15747551 caaaactaaggtaagggtgagactaactctcaataattataa 15747592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 14912137 - 14912081
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 81  Q
    |||||||||||| |||||| |||||||| ||  |||| ||||| |||||||||||||    
T  14912137 taaggtaagggttagactaactctcaatgattgtaatatataacttctgaaaattga 14912081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 13 - 205
Target Start/End: Complemental strand, 18236 - 18043
Alignment:
Q  13 attctgcaaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattg 112  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||| |||| ||||||||    
T  18236 attctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttttgaaaattgacctaattgcttagctttaggaaaataaattg 18137  T
Q  113 agggttagggtttgatgatgattctgaggggaatgggtattgatcatgttaattct-attgtaatgtaatgtttagaatgaaaacttaatctat 205  Q
    ||||||| ||||| ||||||||||| | |||||  |||| || |||||||||||||  ||||||||| ||||  ||||||||||||||| ||||    
T  18136 agggttaaggtttaatgatgattctaacgggaaatggtaatggtcatgttaattctgtttgtaatgtgatgtccagaatgaaaacttaacctat 18043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 109; Significance: 7e-55; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 14 - 212
Target Start/End: Complemental strand, 30923 - 30724
Alignment:
Q  14 ttctgcaaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagat-aaattg 112  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||    
T  30923 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaaggtaaaattg 30825  T
Q  113 agggttagggtttgatgatgattctgaggggaatgg-gtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactgtt 211  Q
    ||| ||||||||||||||||||| |||||||||||| |||  ||||||||||| | | |||||| || ||||  ||||||||  | ||||||||| ||||    
T  30824 aggattagggtttgatgatgattttgaggggaatggtgtaacgatcatgttaaatatgttgtaaagtgatgtgcagaatgaattcctaatctataatgtt 30725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 22 - 212
Target Start/End: Original strand, 3290 - 3481
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatc-ataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttag 120  Q
    |||| |||||||||||||||||||||||| ||||  ||||| | ||||||| |||||||||||||||||| ||   || || | | ||||||||||||||    
T  3290 aattcaggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgcttaaccttggggata-aaattgagggttag 3388  T
Q  121 ggtttgatgatgattctgaggggaatgggtattg-atcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactgttg 212  Q
    ||||||||||||||||||||||||||||||| || |||||||||||| | ||||||||| ||||| ||||||||| |||||||||||||||||    
T  3389 ggtttgatgatgattctgaggggaatgggtaatgaatcatgttaattttgttgtaatgtgatgttcagaatgaaatcttaatctatactgttg 3481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 22 - 212
Target Start/End: Original strand, 3619 - 3809
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatc-ataatctataatttctgaaaattgacctaattgcatagtttttggaagataaa-ttgagggtta 119  Q
    |||| |||||||||||||||||||||||| ||||  ||||| | ||||||| |||||||||||||||||| ||   ||  || |||||| ||||||||||    
T  3619 aattcaggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgcttaacctt--gaggataaaattgagggtta 3716  T
Q  120 gggtttgatgatgattctgaggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactgttg 212  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||| | ||||||||| |||||  |||||||| |||||||||||||||||    
T  3717 gggtttgatgatgattctgagggggatgggtaatgatcatgttaattatgttgtaatgtgatgttcggaatgaaatcttaatctatactgttg 3809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 212
Target Start/End: Original strand, 1727 - 1917
Alignment:
Q  19 caaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggtt 118  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||| |||||||| ||||  |||  |||    
T  1727 caaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatag-ttttggaaaataatatgaaagtt 1824  T
Q  119 agggtttgatgatgattctgaggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactgttg 212  Q
    |||||||||||||||||||||  |||||| |||  ||| |||||| || | | | ||| ||||||| ||||||||| ||||||| || ||||||    
T  1825 agggtttgatgatgattctga-tggaatgagtaaggatgatgttagttttctcggaatttaatgttaagaatgaaagcttaatccatgctgttg 1917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 212
Target Start/End: Original strand, 5750 - 5940
Alignment:
Q  19 caaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggtt 118  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||| |||||||| ||||  |||  |||    
T  5750 caaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatag-ttttggaaaataatatgaaagtt 5847  T
Q  119 agggtttgatgatgattctgaggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactgttg 212  Q
    |||||||||||||||||||||  |||||| |||  ||| |||||| || | | | ||| ||||||| ||||||||| ||||||| || ||||||    
T  5848 agggtttgatgatgattctga-tggaatgagtaaggatgatgttagttttctcggaatttaatgttaagaatgaaagcttaatccatgctgttg 5940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 69; Significance: 6e-31; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 991 - 904
Alignment:
Q  20 aaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataa 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||    
T  991 aaaactaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgcatag-tcttggaagataa 904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 8136 - 8049
Alignment:
Q  20 aaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataa 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||    
T  8136 aaaactaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgcatag-tcttggaagataa 8049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 25 - 137
Target Start/End: Original strand, 45275 - 45386
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtt 124  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||| || ||||  |||   ||||||||    
T  45275 taaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagtttttgaaaaataatatgaaaattagggtt 45373  T
Q  125 tgatgatgattct 137  Q
    |||||||||||||    
T  45374 tgatgatgattct 45386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 57; Significance: 8e-24; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 116955 - 116887
Alignment:
Q  21 aaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 89  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  116955 aaattaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 116887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 59
Target Start/End: Complemental strand, 60474 - 60441
Alignment:
Q  26 aaggtaagggtgagactatctctcaataatcata 59  Q
    |||||||||||||||||| |||||||||||||||    
T  60474 aaggtaagggtgagactaactctcaataatcata 60441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 16878 - 16811
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 89  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  16878 aattaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 16811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 22 - 89
Target Start/End: Original strand, 5 - 72
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 89  Q
    ||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||| |||||||    
T  5 aattaaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 72  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 17710 - 17643
Alignment:
Q  14 ttctgcaaaat-taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 80  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  17710 ttctgcaaaatctaaggtaagggtgagactatctctcaataaccataatgtataatttctgaaaattg 17643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 13690 - 13623
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 89  Q
    ||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||| |||||||    
T  13690 aattaaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 13623  T

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Target: scaffold0020 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 22 - 89
Target Start/End: Original strand, 101925 - 101992
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 89  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||| |||||||    
T  101925 aattaaggtaagggtgagactatctctcaataatcatagtatataattcctgaaaattgatctaattg 101992  T

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Target: scaffold0107 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 40521 - 40587
Alignment:
Q  14 ttctgcaaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 80  Q
    |||||||||  ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  40521 ttctgcaaatctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 40587  T

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Target: scaffold0107; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 59
Target Start/End: Complemental strand, 3942 - 3905
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcata 59  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  3942 aattaaggtaagggtgaggctaactctcaataatcata 3905  T

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Target: scaffold0019 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 135528 - 135473
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 80  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  135528 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 135473  T

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Target: scaffold0815 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 14 - 76
Target Start/End: Complemental strand, 1515 - 1453
Alignment:
Q  14 ttctgcaaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 76  Q
    |||||||||||||||||||||||||||||| |||||||| ||| |||| ||||||||||||||    
T  1515 ttctgcaaaattaaggtaagggtgagactaactctcaatgatcttaatgtataatttctgaaa 1453  T

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Target: scaffold0235 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 22594 - 22646
Alignment:
Q  26 aaggtaagggtgagactatctctcaataatcataatctataatttctgaaaat 78  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  22594 aaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaat 22646  T

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Target: scaffold0138 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 12356 - 12296
Alignment:
Q  21 aaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 81  Q
    ||||||||||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  12356 aaattaaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 12296  T

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Target: scaffold0124 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 34276 - 34331
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 80  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  34276 taaggtaagggtgagactatctctcgataatcatagtatataatttctgaaaattg 34331  T

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Target: scaffold0124; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 35439 - 35495
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 81  Q
    |||||||||||| |||||| |||||||| ||  |||| ||||| |||||||||||||    
T  35439 taaggtaagggtaagactaactctcaatgattgtaatgtataacttctgaaaattga 35495  T

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Target: scaffold0139 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 14994 - 15052
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 80  Q
    |||||||||||||||||||||| |||||||| ||| |||| ||||||||||||||||||    
T  14994 aattaaggtaagggtgagactaactctcaatgatcttaatatataatttctgaaaattg 15052  T

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Target: scaffold0317 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 1441 - 1378
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaatt 88  Q
    |||||||||||||||||||||| ||||| ||||| || |||||||| |||||||||| ||||||    
T  1441 taaggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaattgatctaatt 1378  T

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Target: scaffold0001 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 102
Target Start/End: Original strand, 493029 - 493105
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttgga 102  Q
    |||||||||||||||| ||||| ||||||||| |||| ||||||||||||||||| | ||||| | |||||| |||||    
T  493029 taaggtaagggtgagattatctttcaataatc-taatgtataatttctgaaaattaatctaatggaatagttcttgga 493105  T

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Target: scaffold0609 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 25 - 109
Target Start/End: Original strand, 5858 - 5941
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaa 109  Q
    ||||||||||||| || ||||| ||||| || ||||| ||||||||||||||||| | ||||||| |||||| || |||||||||    
T  5858 taaggtaagggtgggattatctttcaatgattataatatataatttctgaaaattaatctaattgaatagttctt-gaagataaa 5941  T

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Target: scaffold2054 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 77
Target Start/End: Complemental strand, 780 - 717
Alignment:
Q  14 ttctgcaaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 77  Q
    |||||||||| ||||||||||||| || ||||| ||||| ||| |||| |||||||||||||||    
T  780 ttctgcaaaactaaggtaagggtgggattatctttcaatgatcttaatatataatttctgaaaa 717  T

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Target: scaffold0335 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 2625 - 2684
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 81  Q
    |||||||||||||||||| ||| |||||||| || ||||| ||||| |||||||||||||    
T  2625 aattaaggtaagggtgaggctaactctcaatgattataatatataacttctgaaaattga 2684  T

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Target: scaffold0096 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 39508 - 39563
Alignment:
Q  26 aaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 81  Q
    |||||||||||||| ||| |||||||| |||||||| ||||||||| |||||||||    
T  39508 aaggtaagggtgaggctaactctcaatgatcataatatataatttcagaaaattga 39563  T

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Target: scaffold1318 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 1913 - 1967
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 79  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  1913 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 1967  T

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Target: scaffold0348 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 9390 - 9336
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 79  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  9390 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 9336  T

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Target: scaffold0127 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 10293 - 10239
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 79  Q
    |||||||||||||||| |||||  ||||||||||||| | |||||||||||||||    
T  10293 taaggtaagggtgagattatcttccaataatcataatatgtaatttctgaaaatt 10239  T

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Target: scaffold0023 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 135492 - 135438
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 79  Q
    ||||||||| |||||| ||||| |||||| ||||||| |||||||||||||||||    
T  135492 taaggtaagcgtgagattatctttcaatagtcataatatataatttctgaaaatt 135438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0790 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 5520 - 5480
Alignment:
Q  13 attctgcaaaattaaggtaagggtgagactatctctcaata 53  Q
    ||||||||||| |||||||||||||||||||||| ||||||    
T  5520 attctgcaaaactaaggtaagggtgagactatctttcaata 5480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 69805 - 69749
Alignment:
Q  21 aaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 77  Q
    ||||||||||||||||||||||| || ||||| ||| |||| |||||||| ||||||    
T  69805 aaattaaggtaagggtgagactaactttcaatgatcttaatatataatttatgaaaa 69749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 2120 - 2053
Alignment:
Q  20 aaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaat 87  Q
    ||||||||||||||| |||| ||| |||||||| ||  || | |||||||||||||||||||| ||||    
T  2120 aaaattaaggtaaggctgaggctaactctcaatgattgtattatataatttctgaaaattgacttaat 2053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1128 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold1128
Description:

Target: scaffold1128; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 45
Target Start/End: Complemental strand, 560 - 529
Alignment:
Q  14 ttctgcaaaattaaggtaagggtgagactatc 45  Q
    ||||||||||||||||||||||||||||||||    
T  560 ttctgcaaaattaaggtaagggtgagactatc 529  T

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Target: scaffold0600 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0600
Description:

Target: scaffold0600; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 791 - 732
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 81  Q
    |||||||||| ||||||| ||| |||||||| || ||||| ||||| |||||||||||||    
T  791 aattaaggtaggggtgaggctaactctcaatgattataatatataacttctgaaaattga 732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 60
Target Start/End: Complemental strand, 657 - 618
Alignment:
Q  21 aaattaaggtaagggtgagactatctctcaataatcataa 60  Q
    ||||||||||||||||||||||| ||||||||||| ||||    
T  657 aaattaaggtaagggtgagactaactctcaataattataa 618  T

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Target: scaffold0249 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 13895 - 13970
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctg-aaaattgacctaattgcatagttttt 99  Q
    ||||||||||||| || ||||| ||||| || ||||| ||||||||||| |||||| | ||||||| |||||||||    
T  13895 taaggtaagggtgggattatctttcaatgattataatatataatttctgaaaaattaatctaattgaatagttttt 13970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 11684 - 11630
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcataa--tctataatttctga 74  Q
    |||||||||||||||||||||| ||||||||||| ||||  | ||||||||||||    
T  11684 aattaaggtaagggtgagactaactctcaataattataaattatataatttctga 11630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 121961 - 121902
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 81  Q
    |||||||||||||||||| ||| |||||||| || ||||| |||||  ||||||||||||    
T  121961 aattaaggtaagggtgaggctaactctcaatgattataatatataaaatctgaaaattga 121902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 132837 - 132778
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 81  Q
    |||||||||||||||||| ||| |||||||| || ||||| |||||  ||||||||||||    
T  132837 aattaaggtaagggtgaggctaactctcaatgattataatatataaaatctgaaaattga 132778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 52
Target Start/End: Complemental strand, 1523 - 1493
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaat 52  Q
    |||||||||||||||||||||||||||||||    
T  1523 aattaaggtaagggtgagactatctctcaat 1493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0429 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 1996 - 2034
Alignment:
Q  21 aaattaaggtaagggtgagactatctctcaataatcata 59  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  1996 aaattaaggtaagggtgaggctaactctcaataatcata 2034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 23570 - 23624
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 79  Q
    ||||||||||||| || ||||| | ||| |||||||| |||||||||||||||||    
T  23570 taaggtaagggtgggattatctttgaatgatcataatgtataatttctgaaaatt 23624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 79491 - 79545
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 79  Q
    ||||||||||||| || ||||| |||||| ||||||| | |||||||||||||||    
T  79491 taaggtaagggtgggattatctttcaatagtcataatatgtaatttctgaaaatt 79545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0956 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 66
Target Start/End: Original strand, 2090 - 2135
Alignment:
Q  21 aaattaaggtaagggtgagactatctctcaataatcataatctata 66  Q
    ||||||||||||||||||||||| || |||||||| ||| ||||||    
T  2090 aaattaaggtaagggtgagactaactttcaataattatagtctata 2135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 676 - 721
Alignment:
Q  26 aaggtaagggtgagactatctctcaataatcataatctataatttc 71  Q
    |||||||||||||||||| |||||||| ||| |||| |||||||||    
T  676 aaggtaagggtgagactaactctcaatgatcttaatgtataatttc 721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 59
Target Start/End: Complemental strand, 7730 - 7693
Alignment:
Q  22 aattaaggtaagggtgagactatctctcaataatcata 59  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  7730 aattaaggtaagggtgaggctaactctcaataatcata 7693  T

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Target: scaffold0034 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 135
Target Start/End: Complemental strand, 73337 - 73229
Alignment:
Q  27 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagat-aaattgagggttagggttt 125  Q
    ||||||||||| || ||||| ||||| |||||||| |||||||| |||||||| | ||||| | |||| | || |||||| ||||||||  ||||||| |    
T  73337 aggtaagggtgggattatctttcaatgatcataatgtataatttatgaaaattaatctaataggatagctctt-gaagataaaattgagaattagggtgt 73239  T
Q  126 gatgatgatt 135  Q
    |||| |||||    
T  73238 gatgttgatt 73229  T

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Target: scaffold1461 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1461
Description:

Target: scaffold1461; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 1481 - 1549
Alignment:
Q  21 aaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 89  Q
    |||||||||||||||||||| |||||  |||| ||| |||| |  |||||||||||||| | |||||||    
T  1481 aaattaaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatctaattg 1549  T

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Target: scaffold0453 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 109
Target Start/End: Original strand, 10551 - 10634
Alignment:
Q  25 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaa 109  Q
    ||||||||| ||| || ||||| ||||| ||| |||| ||||||||||||||||| | ||||| | |||||| || |||||||||    
T  10551 taaggtaagtgtgggattatctttcaatgatcttaatgtataatttctgaaaattaatctaatagaatagttctt-gaagataaa 10634  T

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Target: scaffold0207 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 53
Target Start/End: Complemental strand, 9711 - 9679
Alignment:
Q  21 aaattaaggtaagggtgagactatctctcaata 53  Q
    |||||||||||||||||||| ||||||||||||    
T  9711 aaattaaggtaagggtgagattatctctcaata 9679  T

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Target: scaffold0012 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 222201 - 222261
Alignment:
Q  21 aaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 81  Q
    ||||||||||||||||||| ||| || ||||| ||  |||| ||||| |||||||||||||    
T  222201 aaattaaggtaagggtgaggctaactttcaatgattgtaatatataacttctgaaaattga 222261  T

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