View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21014_low_1 (Length: 695)

Name: NF21014_low_1
Description: NF21014
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21014_low_1
NF21014_low_1
[»] chr7 (1 HSPs)
chr7 (19-683)||(12359318-12359972)


Alignment Details
Target: chr7 (Bit Score: 532; Significance: 0; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 532; E-Value: 0
Query Start/End: Original strand, 19 - 683
Target Start/End: Original strand, 12359318 - 12359972
Alignment:
Q  19 tttaggatattttaagtactttggaggaaaaggtttttggttaaatatttatggaagagcccaactccgtcaaaattggtcactttttattggacattgg 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||          |||||     
T  12359318 tttaggatattttaagtactttggaggaaaaggtttttggttaaatattcatggaagagcccaactccgtcaaaattggtcact----------cattgc 12359407  T
Q  119 ttctaaattggatgccaactcgtaagtatcttgcattccaaaattctttgggggtggatgagggggcgtcgtgtgtattgtgtggagaaggtttggaaac 218  Q
    ||||||| ||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12359408 ttctaaactggatgccaactcgtaagtatcttgcagtccgaaatgctttgggggtggatgagggggcgtcgtgtgtattgtgtggagaaggtttggaaac 12359507  T
Q  219 acaactcgtctctttttagattgtgaggtagtgtcaaaggtttgggtgaaggtgatgcattggttgagatttactttcattactccgcctaannnnnnna 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||       |    
T  12359508 acaactcgtctctttttagattgtgaggtagtgtcaaaggtttgggtgaaggtgattcattggttgagatttactttcattactccgcctaattttttta 12359607  T
Q  319 actatttggattgttggacagcacaatggaggtctaagaaaattagacaggggttttggtagatttggcatgcttgtattttggtgatttggagggaaag 418  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  12359608 actatttggattgttggacagcacaatggaggtctaagaaaattagacaggggttttggttgatttggcatgcttgtattttggtgatttggagggaaag 12359707  T
Q  419 aagcgagtctttaatgatcgctcaaaggaggttaatgagttagctgaggagattaaagagttgccgtgacaatggagtttaaagagactgtctaaattgt 518  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12359708 aagcgagtctttaatgatcgcttaaaggaggttaatgagttagctgaggagattaaagagttgccgtgacaatggagtttaaagagactgtctaaattgt 12359807  T
Q  519 attacctttatacgaatggatgtgcaatccgcgcgattgcttgcaaatgggctaactgagttagttttgtattggtgtgctannnnnnngtcgcctatgc 618  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||       |||| ||||||    
T  12359808 attacctttatacgaatggacgtgcaatccgcgcaattgcttgcaaatgggctaactgagttagttttgtgttggtgtgctatttttttgtcgactatgc 12359907  T
Q  619 tagtatatgtgtgtggttttttgtctccctactctggtgtgctggttcctctgctgtgtttgtct 683  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  12359908 tagtatatgtgtgtggttttttgtctccctactctggtgtgctggttcctctgctgtgcttgtct 12359972  T

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