View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21014_low_14 (Length: 437)

Name: NF21014_low_14
Description: NF21014
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21014_low_14
NF21014_low_14
[»] chr7 (14 HSPs)
chr7 (20-427)||(18997695-18998102)
chr7 (20-427)||(18953002-18953409)
chr7 (20-427)||(18983049-18983456)
chr7 (20-152)||(18988126-18988258)
chr7 (102-170)||(19637571-19637639)
chr7 (297-352)||(19597826-19597881)
chr7 (115-153)||(661023-661061)
chr7 (218-262)||(19357677-19357721)
chr7 (309-396)||(19604591-19604678)
chr7 (196-263)||(19604733-19604800)
chr7 (293-379)||(29881095-29881181)
chr7 (104-161)||(29880927-29880984)
chr7 (128-160)||(22039898-22039930)
chr7 (108-160)||(24391074-24391126)
[»] chr4 (5 HSPs)
chr4 (104-157)||(3565397-3565450)
chr4 (105-163)||(3557380-3557438)
chr4 (109-157)||(1686649-1686697)
chr4 (130-168)||(35766701-35766739)
chr4 (104-161)||(3561318-3561375)
[»] scaffold0097 (2 HSPs)
scaffold0097 (105-161)||(16711-16767)
scaffold0097 (299-348)||(16548-16597)
[»] chr2 (4 HSPs)
chr2 (105-161)||(20712872-20712928)
chr2 (299-348)||(20712709-20712758)
chr2 (102-163)||(20975215-20975276)
chr2 (295-348)||(20967541-20967594)
[»] scaffold0464 (1 HSPs)
scaffold0464 (224-262)||(7837-7875)
[»] chr3 (2 HSPs)
chr3 (224-262)||(12735055-12735093)
chr3 (222-262)||(32579121-32579161)
[»] chr5 (1 HSPs)
chr5 (293-354)||(24331069-24331130)
[»] chr1 (2 HSPs)
chr1 (293-354)||(21855553-21855614)
chr1 (108-157)||(39379425-39379474)
[»] chr6 (1 HSPs)
chr6 (306-366)||(20770502-20770562)


Alignment Details
Target: chr7 (Bit Score: 400; Significance: 0; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 400; E-Value: 0
Query Start/End: Original strand, 20 - 427
Target Start/End: Complemental strand, 18998102 - 18997695
Alignment:
Q  20 actctatacactttggcggttttggtttggttatgatgattcaattaacgattataagattgtggcgtactatgaaaagatcaacgaggtgagagttttc 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18998102 actctatacactttggcggttttggtttggttatgatgattcaattaacgattataagattgtggcgtactatgaaaagatcaacgaggtgagagttttc 18998003  T
Q  120 aatttaggcgataatgtttggagacatattcaaagttttcctgtggctccttttatggatatttccactagtccccatactcatctgggtattaatgctg 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18998002 aatttaggcgataatgtttggagacatattcaaagttttcctgtggctccttttatggatatttccactagtccccatactcatctgggtattaatgctg 18997903  T
Q  220 gcgtgtatgtgagtggcactgttaactggttggccattcgaaacgcatgcccatgtaattttgaattgaaatctattactattgaccaatttgtgatcat 319  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18997902 gcgtgtatgtgagtggcactgttaattggttggccattcgaaacgcgtgcccatgtaattttgaattgaaatctattactattgaccaatttgtgatcat 18997803  T
Q  320 ctcccttgatttgaggacggagacatacaatcaatttctactccctcttggttttgatgaagtgacgtctgttgagcccactctatctttcttgatggac 419  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18997802 ctcccttgatttgaggacggagacatacaatcaatttctactccctcttggttttgatgaagtgacgtctgttgagcccactctatctttcttgatggac 18997703  T
Q  420 tccctatg 427  Q
    ||||||||    
T  18997702 tccctatg 18997695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 396; E-Value: 0
Query Start/End: Original strand, 20 - 427
Target Start/End: Complemental strand, 18953409 - 18953002
Alignment:
Q  20 actctatacactttggcggttttggtttggttatgatgattcaattaacgattataagattgtggcgtactatgaaaagatcaacgaggtgagagttttc 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  18953409 actctatacactttggcggttttggtttggttatgatgattcaattaacgattataagattgtggcgttctatgaaaagatcaacgaggtgagagttttc 18953310  T
Q  120 aatttaggcgataatgtttggagacatattcaaagttttcctgtggctccttttatggatatttccactagtccccatactcatctgggtattaatgctg 219  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  18953309 aattttggcgataatgtttggagacatattcaaagttttcctgtggctccttttatggatatttccacttgtccccatactcatctgggtattaatgctg 18953210  T
Q  220 gcgtgtatgtgagtggcactgttaactggttggccattcgaaacgcatgcccatgtaattttgaattgaaatctattactattgaccaatttgtgatcat 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18953209 gcgtgtatgtgagtggcactgttaactggttggccattcgaaacgcatgcccatgtaattttgaattgaaatctattactattgaccaatttgtgatcat 18953110  T
Q  320 ctcccttgatttgaggacggagacatacaatcaatttctactccctcttggttttgatgaagtgacgtctgttgagcccactctatctttcttgatggac 419  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18953109 ctcccttgatttgaggacggagacatacaatcaatttctactccctcttggttttgatgaagtgacgtctgttgagcccactctatctttcttgatggac 18953010  T
Q  420 tccctatg 427  Q
    ||||||||    
T  18953009 tccctatg 18953002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 388; E-Value: 0
Query Start/End: Original strand, 20 - 427
Target Start/End: Complemental strand, 18983456 - 18983049
Alignment:
Q  20 actctatacactttggcggttttggtttggttatgatgattcaattaacgattataagattgtggcgtactatgaaaagatcaacgaggtgagagttttc 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18983456 actctatacactttggcggttttggtttggttatgatgattcaattaacgattataagattgtggcgtactatgaaaagatcaacgaggtgagagttttc 18983357  T
Q  120 aatttaggcgataatgtttggagacatattcaaagttttcctgtggctccttttatggatatttccactagtccccatactcatctgggtattaatgctg 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  18983356 aatttaggcgataatgtttggagacatattcaaagttttcctgtggctccttttatggatatttccacttgtccccatactcatctgggtattaatgctg 18983257  T
Q  220 gcgtgtatgtgagtggcactgttaactggttggccattcgaaacgcatgcccatgtaattttgaattgaaatctattactattgaccaatttgtgatcat 319  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  18983256 gcgtgtatgtgagtggcactgttaactggttggccattcgaaacgcgtgtccatgtaattttgaattgaaatctattactattgaccaattcgtgatcat 18983157  T
Q  320 ctcccttgatttgaggacggagacatacaatcaatttctactccctcttggttttgatgaagtgacgtctgttgagcccactctatctttcttgatggac 419  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18983156 ctcccttgatttgaggacggagacatacaatcaatttctactccctcttggttttgatgaagtgacgtctgttgagcccaccctatctttcttgatggac 18983057  T
Q  420 tccctatg 427  Q
    ||||||||    
T  18983056 tccctatg 18983049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 20 - 152
Target Start/End: Complemental strand, 18988258 - 18988126
Alignment:
Q  20 actctatacactttggcggttttggtttggttatgatgattcaattaacgattataagattgtggcgtactatgaaaagatcaacgaggtgagagttttc 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18988258 actctatacactttggcggttttggtttggttatgatgattcaattaacgattataagattgtggcgtactatgaaaagatcaacgaggtgagagttttc 18988159  T
Q  120 aatttaggcgataatgtttggagacatattcaa 152  Q
    |||||||||||||||||||||||||||||||||    
T  18988158 aatttaggcgataatgtttggagacatattcaa 18988126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 19637639 - 19637571
Alignment:
Q  102 aacgaggtgagagttttcaatttaggcgataatgtttggagacatattcaaagttttcctgtggctcct 170  Q
    ||||||||||||||||| | ||| || ||||| ||||||||| ||||||||||||||||| ||| ||||    
T  19637639 aacgaggtgagagtttttagttttggtgataaagtttggagaaatattcaaagttttcctatggttcct 19637571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 297 - 352
Target Start/End: Complemental strand, 19597881 - 19597826
Alignment:
Q  297 actattgaccaatttgtgatcatctcccttgatttgaggacggagacatacaatca 352  Q
    |||||||||||||||||||||||||  ||||||||||  |||||||||||| ||||    
T  19597881 actattgaccaatttgtgatcatcttgcttgatttgattacggagacataccatca 19597826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Complemental strand, 661061 - 661023
Alignment:
Q  115 ttttcaatttaggcgataatgtttggagacatattcaaa 153  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  661061 ttttcaatttaggcgataatgtttggagaaatattcaaa 661023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 262
Target Start/End: Original strand, 19357677 - 19357721
Alignment:
Q  218 tggcgtgtatgtgagtggcactgttaactggttggccattcgaaa 262  Q
    ||||||||||||||| |||||| ||||||||||||| ||||||||    
T  19357677 tggcgtgtatgtgagaggcactattaactggttggctattcgaaa 19357721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 396
Target Start/End: Complemental strand, 19604678 - 19604591
Alignment:
Q  309 tttgtgatcatctcccttgatttgaggacggagacatacaatcaatttctactccctcttggttttgatgaagtgacgtctgttgagc 396  Q
    ||||| |||||||||||||||||||| || |||||||||  |||| |||  || |||| |||||||||| ||||| |  |||||||||    
T  19604678 tttgttatcatctcccttgatttgagtactgagacataccgtcaacttcgtctgcctcgtggttttgataaagtgccacctgttgagc 19604591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 196 - 263
Target Start/End: Complemental strand, 19604800 - 19604733
Alignment:
Q  196 atactcatctgggtattaatgctggcgtgtatgtgagtggcactgttaactggttggccattcgaaac 263  Q
    |||||||| ||| |||||||  ||| |||||||||||||| ||| |||||||||||| ||||| ||||    
T  19604800 atactcatatggctattaataatggtgtgtatgtgagtggtactcttaactggttggtcattcaaaac 19604733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 293 - 379
Target Start/End: Original strand, 29881095 - 29881181
Alignment:
Q  293 tattactattgaccaatttgtgatcatctcccttgatttgaggacggagacatacaatcaatttctactccctcttggttttgatga 379  Q
    ||||||| ||||||||||||| ||  | || ||||||||| |||| |||||||||||||||| || ||| ||||   ||||||||||    
T  29881095 tattactgttgaccaatttgttattgtttcacttgatttggggactgagacatacaatcaatatcgactgcctccgagttttgatga 29881181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 29880927 - 29880984
Alignment:
Q  104 cgaggtgagagttttcaatttaggcgataatgtttggagacatattcaaagttttcct 161  Q
    ||||||||||||| ||||| | || ||| ||||||||||| ||||| |||||||||||    
T  29880927 cgaggtgagagttctcaatcttggtgatgatgtttggagaaatattgaaagttttcct 29880984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 128 - 160
Target Start/End: Original strand, 22039898 - 22039930
Alignment:
Q  128 cgataatgtttggagacatattcaaagttttcc 160  Q
    |||||||||||||||| ||||||||||||||||    
T  22039898 cgataatgtttggagaaatattcaaagttttcc 22039930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 24391074 - 24391126
Alignment:
Q  108 gtgagagttttcaatttaggcgataatgtttggagacatattcaaagttttcc 160  Q
    ||||||||||| | ||| || |||||| |||||||| ||||||||||||||||    
T  24391074 gtgagagtttttagtttgggtgataatatttggagaaatattcaaagttttcc 24391126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000003; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 3565397 - 3565450
Alignment:
Q  104 cgaggtgagagttttcaatttaggcgataatgtttggagacatattcaaagttt 157  Q
    ||||||||||||||||| |||||| ||||||||||||||| ||||| |||||||    
T  3565397 cgaggtgagagttttcagtttaggtgataatgtttggagaaatattgaaagttt 3565450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 105 - 163
Target Start/End: Original strand, 3557380 - 3557438
Alignment:
Q  105 gaggtgagagttttcaatttaggcgataatgtttggagacatattcaaagttttcctgt 163  Q
    ||||| |||||||||| |||||| ||||||||||||||| ||||| ||||||| |||||    
T  3557380 gaggttagagttttcagtttaggtgataatgtttggagaaatattgaaagtttccctgt 3557438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 157
Target Start/End: Complemental strand, 1686697 - 1686649
Alignment:
Q  109 tgagagttttcaatttaggcgataatgtttggagacatattcaaagttt 157  Q
    |||||||||||| |||||| ||||||||||||||| ||||| |||||||    
T  1686697 tgagagttttcagtttaggtgataatgtttggagaaatattgaaagttt 1686649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 130 - 168
Target Start/End: Original strand, 35766701 - 35766739
Alignment:
Q  130 ataatgtttggagacatattcaaagttttcctgtggctc 168  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  35766701 ataatgtttggagacgcattcaaagttttcctgtggctc 35766739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 3561375 - 3561318
Alignment:
Q  104 cgaggtgagagttttcaatttaggcgataatgtttggagacatattcaaagttttcct 161  Q
    ||||||||||| ||||  ||| || ||||||||||||||| ||||| |||||||||||    
T  3561375 cgaggtgagagctttcggttttggtgataatgtttggagaaatattgaaagttttcct 3561318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 16767 - 16711
Alignment:
Q  105 gaggtgagagttttcaatttaggcgataatgtttggagacatattcaaagttttcct 161  Q
    ||||| |||||||||| ||| |||||||||||||||||| |||||||| ||||||||    
T  16767 gaggtcagagttttcactttgggcgataatgtttggagaaatattcaatgttttcct 16711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 299 - 348
Target Start/End: Complemental strand, 16597 - 16548
Alignment:
Q  299 tattgaccaatttgtgatcatctcccttgatttgaggacggagacataca 348  Q
    |||||| |||||||||||||||||||| |||||| ||| |||||||||||    
T  16597 tattgaacaatttgtgatcatctccctcgatttggggatggagacataca 16548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.00000000001; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 20712928 - 20712872
Alignment:
Q  105 gaggtgagagttttcaatttaggcgataatgtttggagacatattcaaagttttcct 161  Q
    ||||| |||||||||| ||| |||||||||||||||||| |||||||| ||||||||    
T  20712928 gaggtcagagttttcactttgggcgataatgtttggagaaatattcaatgttttcct 20712872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 299 - 348
Target Start/End: Complemental strand, 20712758 - 20712709
Alignment:
Q  299 tattgaccaatttgtgatcatctcccttgatttgaggacggagacataca 348  Q
    |||||| |||||||||||||||||||| |||||| ||| |||||||||||    
T  20712758 tattgaacaatttgtgatcatctccctcgatttggggatggagacataca 20712709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 20975215 - 20975276
Alignment:
Q  102 aacgaggtgagagttttcaatttaggcgataatgtttggagacatattcaaagttttcctgt 163  Q
    |||||||| | |||||||| ||| ||||| ||| |||||||| |||||||||||||||||||    
T  20975215 aacgaggtaaaagttttcactttgggcgaaaatatttggagaaatattcaaagttttcctgt 20975276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 348
Target Start/End: Original strand, 20967541 - 20967594
Alignment:
Q  295 ttactattgaccaatttgtgatcatctcccttgatttgaggacggagacataca 348  Q
    ||||| |||| |||||||||||||| |||||||||||| |||| ||||| ||||    
T  20967541 ttactgttgagcaatttgtgatcatttcccttgatttggggacagagacctaca 20967594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 224 - 262
Target Start/End: Original strand, 7837 - 7875
Alignment:
Q  224 gtatgtgagtggcactgttaactggttggccattcgaaa 262  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  7837 gtatgtgagtggcactgttaactggttggctattcgaaa 7875  T

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Target: chr3 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 262
Target Start/End: Complemental strand, 12735093 - 12735055
Alignment:
Q  224 gtatgtgagtggcactgttaactggttggccattcgaaa 262  Q
    |||||| ||||||||||||||||||||||| ||||||||    
T  12735093 gtatgtaagtggcactgttaactggttggctattcgaaa 12735055  T

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Target: chr3; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 32579161 - 32579121
Alignment:
Q  222 gtgtatgtgagtggcactgttaactggttggccattcgaaa 262  Q
    |||||||||||||||||| |||| |||||||| ||||||||    
T  32579161 gtgtatgtgagtggcactattaattggttggctattcgaaa 32579121  T

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Target: chr5 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 354
Target Start/End: Complemental strand, 24331130 - 24331069
Alignment:
Q  293 tattactattgaccaatttgtgatcatctcccttgatttgaggacggagacatacaatcaat 354  Q
    ||||||| ||||||| ||||||||  | || |||||||||  ||||||||||||||||||||    
T  24331130 tattactgttgaccagtttgtgattgtttctcttgatttggagacggagacatacaatcaat 24331069  T

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Target: chr1 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 354
Target Start/End: Complemental strand, 21855614 - 21855553
Alignment:
Q  293 tattactattgaccaatttgtgatcatctcccttgatttgaggacggagacatacaatcaat 354  Q
    ||||||| ||||||| ||||||||  | || |||||||||  ||||||||||||||||||||    
T  21855614 tattactgttgaccagtttgtgattgtttctcttgatttggagacggagacatacaatcaat 21855553  T

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Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 157
Target Start/End: Complemental strand, 39379474 - 39379425
Alignment:
Q  108 gtgagagttttcaatttaggcgataatgtttggagacatattcaaagttt 157  Q
    ||||||||||||| ||| || ||||||||||||||| ||||| |||||||    
T  39379474 gtgagagttttcagtttgggtgataatgtttggagaaatattgaaagttt 39379425  T

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Target: chr6 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 306 - 366
Target Start/End: Original strand, 20770502 - 20770562
Alignment:
Q  306 caatttgtgatcatctcccttgatttgaggacggagacatacaatcaatttctactccctc 366  Q
    |||||||||||||||||||||||||||  ||  ||||||||||| || ||  |||||||||    
T  20770502 caatttgtgatcatctcccttgatttggcgaaagagacatacaaacagttgttactccctc 20770562  T

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