View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21014_low_42 (Length: 266)
Name: NF21014_low_42
Description: NF21014
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21014_low_42 |
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Alignment Details
Target: chr3 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 32554440 - 32554193
Alignment:
| Q |
1 |
agtccccatagcattaacattcatcaaatcagtaagagtagtaaaatacctagcagcaatattattcaaactatccaacggctgaacaacatacgacatg |
100 |
Q |
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| T |
32554440 |
agtccccatagcattaacattcatcaaatcagtaagagtagtaaaatacctagcagcaatattattcaaactatccaacggctgaacaacataagacatg |
32554341 |
T |
|
| Q |
101 |
taaatcgcgggcaacccattatcagaaccattaaaacaagtacaaggaagaggaacaacaaggttctgaccaacatcaagaacattcggatccgtaacag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32554340 |
taaatcgcgggcaacccattatcagaaccattaaaacaagtacaaggaagaggaacaacaaggttctgaccaacatcaagaacattcggatccgtaacag |
32554241 |
T |
|
| Q |
201 |
agttagcttctctaagctgatcagaagaaaccaaaccaccgtaaatgg |
248 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32554240 |
agttagcttctctaagctgatcagaagaaaccaaaccaccgtaaatgg |
32554193 |
T |
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