View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21014_low_61 (Length: 215)

Name: NF21014_low_61
Description: NF21014
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21014_low_61
NF21014_low_61
[»] chr8 (89 HSPs)
chr8 (40-155)||(34890168-34890283)
chr8 (40-155)||(36190823-36190938)
chr8 (40-155)||(43216341-43216456)
chr8 (40-155)||(26483583-26483698)
chr8 (40-155)||(13143939-13144055)
chr8 (40-155)||(7022397-7022512)
chr8 (40-155)||(7858579-7858694)
chr8 (40-155)||(29920262-29920377)
chr8 (40-155)||(30575828-30575944)
chr8 (41-155)||(24892889-24893006)
chr8 (40-155)||(8711928-8712038)
chr8 (42-155)||(28348661-28348774)
chr8 (40-154)||(34158284-34158399)
chr8 (66-155)||(31734166-31734255)
chr8 (40-147)||(35456014-35456125)
chr8 (40-155)||(15957903-15958020)
chr8 (40-154)||(16358106-16358219)
chr8 (54-155)||(35525638-35525737)
chr8 (46-155)||(41086386-41086495)
chr8 (66-151)||(13143819-13143904)
chr8 (40-155)||(8709780-8709895)
chr8 (46-155)||(8107617-8107727)
chr8 (40-122)||(2052947-2053029)
chr8 (54-155)||(16879400-16879501)
chr8 (41-142)||(41362302-41362403)
chr8 (50-134)||(15824641-15824725)
chr8 (40-148)||(44663786-44663891)
chr8 (40-153)||(17713276-17713389)
chr8 (40-155)||(7499778-7499881)
chr8 (40-142)||(17336806-17336908)
chr8 (40-153)||(8712577-8712690)
chr8 (40-155)||(4046887-4047003)
chr8 (103-149)||(2052891-2052937)
chr8 (40-142)||(3100018-3100120)
chr8 (95-153)||(26954441-26954499)
chr8 (40-153)||(2628158-2628271)
chr8 (44-89)||(11158678-11158723)
chr8 (46-142)||(8745647-8745743)
chr8 (41-148)||(34899983-34900090)
chr8 (40-142)||(27621195-27621297)
chr8 (40-142)||(27752651-27752753)
chr8 (40-142)||(38072227-38072329)
chr8 (40-142)||(40773397-40773499)
chr8 (178-215)||(7499717-7499754)
chr8 (42-142)||(8673445-8673550)
chr8 (40-89)||(45190701-45190750)
chr8 (179-215)||(35456157-35456193)
chr8 (70-140)||(4480841-4480911)
chr8 (40-142)||(11044122-11044224)
chr8 (40-142)||(24612474-24612576)
chr8 (84-142)||(25195085-25195142)
chr8 (40-142)||(31133023-31133125)
chr8 (40-142)||(34713593-34713695)
chr8 (40-142)||(35260122-35260224)
chr8 (40-142)||(35344432-35344534)
chr8 (40-142)||(44052686-44052788)
chr8 (40-142)||(44411203-44411305)
chr8 (40-140)||(3225514-3225617)
chr8 (42-147)||(6401679-6401784)
chr8 (178-215)||(13143755-13143792)
chr8 (178-215)||(15958045-15958082)
chr8 (178-215)||(24892829-24892866)
chr8 (178-215)||(34890306-34890343)
chr8 (178-215)||(36190763-36190800)
chr8 (115-155)||(3642039-3642078)
chr8 (40-140)||(4038876-4038975)
chr8 (40-155)||(24510691-24510804)
chr8 (178-214)||(28348603-28348639)
chr8 (40-141)||(33563501-33563606)
chr8 (40-134)||(2238589-2238681)
chr8 (178-213)||(8107749-8107784)
chr8 (106-153)||(28497198-28497245)
chr8 (178-212)||(7022535-7022569)
chr8 (178-212)||(8709916-8709950)
chr8 (40-142)||(11992793-11992895)
chr8 (91-141)||(14693434-14693484)
chr8 (178-212)||(26483526-26483560)
chr8 (80-142)||(36538123-36538185)
chr8 (181-215)||(41086521-41086555)
chr8 (181-215)||(43216482-43216516)
chr8 (178-215)||(7858519-7858556)
chr8 (178-215)||(13144093-13144130)
chr8 (107-148)||(14576213-14576254)
chr8 (78-139)||(25321618-25321679)
chr8 (178-215)||(31734106-31734143)
chr8 (178-215)||(34158423-34158460)
chr8 (178-215)||(41755917-41755954)
chr8 (43-111)||(12108251-12108319)
chr8 (80-140)||(33851057-33851117)
[»] chr5 (71 HSPs)
chr5 (40-155)||(20644067-20644182)
chr5 (40-155)||(42273700-42273815)
chr5 (40-155)||(43589955-43590070)
chr5 (40-155)||(6686437-6686553)
chr5 (40-155)||(11261877-11261992)
chr5 (40-154)||(20039156-20039270)
chr5 (41-155)||(34425383-34425497)
chr5 (50-155)||(37522592-37522697)
chr5 (40-155)||(37562754-37562870)
chr5 (47-155)||(38130113-38130224)
chr5 (46-155)||(19413194-19413303)
chr5 (66-155)||(32111055-32111144)
chr5 (40-155)||(25840917-25841032)
chr5 (44-151)||(12912292-12912398)
chr5 (42-152)||(43454318-43454428)
chr5 (65-153)||(5984126-5984214)
chr5 (40-155)||(17351441-17351556)
chr5 (59-147)||(42104262-42104348)
chr5 (40-155)||(4463413-4463526)
chr5 (40-155)||(39505225-39505341)
chr5 (40-155)||(12792779-12792884)
chr5 (40-155)||(23233464-23233579)
chr5 (62-155)||(8225514-8225608)
chr5 (40-155)||(12729878-12729982)
chr5 (52-154)||(41625517-41625618)
chr5 (42-139)||(32079573-32079670)
chr5 (40-140)||(5736233-5736333)
chr5 (42-142)||(8506497-8506597)
chr5 (40-153)||(30893243-30893356)
chr5 (102-155)||(32017756-32017809)
chr5 (49-118)||(32019911-32019980)
chr5 (94-155)||(38280900-38280961)
chr5 (40-154)||(9957428-9957526)
chr5 (44-154)||(104216-104321)
chr5 (84-141)||(8959707-8959764)
chr5 (106-150)||(10153987-10154031)
chr5 (54-142)||(16153353-16153440)
chr5 (106-153)||(5369090-5369137)
chr5 (44-142)||(13146793-13146891)
chr5 (40-142)||(24432393-24432495)
chr5 (40-142)||(25962441-25962543)
chr5 (40-142)||(31690613-31690715)
chr5 (40-145)||(24439633-24439738)
chr5 (44-153)||(30703656-30703765)
chr5 (181-215)||(5984249-5984283)
chr5 (40-142)||(12638953-12639055)
chr5 (40-142)||(16286076-16286178)
chr5 (40-142)||(31316794-31316896)
chr5 (49-142)||(1144493-1144586)
chr5 (85-142)||(3463853-3463910)
chr5 (42-155)||(8143985-8144098)
chr5 (178-215)||(9957547-9957584)
chr5 (178-215)||(11262015-11262052)
chr5 (178-215)||(12730111-12730148)
chr5 (178-215)||(12792932-12792969)
chr5 (45-142)||(29307185-29307282)
chr5 (178-215)||(32017697-32017734)
chr5 (178-215)||(37562893-37562930)
chr5 (178-215)||(38130247-38130284)
chr5 (178-212)||(6686380-6686414)
chr5 (181-215)||(32110995-32111029)
chr5 (40-142)||(35462712-35462813)
chr5 (40-142)||(37066216-37066318)
chr5 (178-212)||(43590093-43590127)
chr5 (178-215)||(8225456-8225493)
chr5 (178-215)||(20644007-20644044)
chr5 (178-215)||(23233392-23233429)
chr5 (178-215)||(34425324-34425361)
chr5 (178-215)||(38280840-38280877)
chr5 (178-215)||(42273642-42273679)
chr5 (178-215)||(43454454-43454491)
[»] chr4 (89 HSPs)
chr4 (40-155)||(20281642-20281757)
chr4 (40-155)||(47867930-47868045)
chr4 (40-155)||(2229298-2229413)
chr4 (40-155)||(4058766-4058881)
chr4 (40-155)||(7654668-7654783)
chr4 (40-155)||(26916376-26916491)
chr4 (40-155)||(29203557-29203672)
chr4 (40-153)||(39078210-39078322)
chr4 (40-155)||(55580721-55580836)
chr4 (40-154)||(14332812-14332926)
chr4 (40-154)||(41414597-41414711)
chr4 (40-155)||(20716231-20716346)
chr4 (45-155)||(16604837-16604947)
chr4 (40-155)||(10069748-10069863)
chr4 (40-155)||(24940416-24940531)
chr4 (42-155)||(56318058-56318171)
chr4 (40-155)||(5483264-5483379)
chr4 (40-154)||(28668987-28669101)
chr4 (40-155)||(17794527-17794642)
chr4 (46-155)||(35310734-35310843)
chr4 (40-148)||(21722668-21722776)
chr4 (41-155)||(42915581-42915695)
chr4 (42-126)||(16473828-16473912)
chr4 (40-154)||(48793616-48793728)
chr4 (40-155)||(8683292-8683407)
chr4 (40-140)||(5064641-5064741)
chr4 (40-155)||(1585335-1585448)
chr4 (40-155)||(12002619-12002741)
chr4 (40-142)||(32203277-32203379)
chr4 (46-155)||(17799126-17799235)
chr4 (40-100)||(50080442-50080502)
chr4 (40-142)||(28142608-28142710)
chr4 (40-154)||(19351899-19352018)
chr4 (60-155)||(32280009-32280104)
chr4 (40-141)||(32410393-32410494)
chr4 (48-153)||(46070517-46070621)
chr4 (53-153)||(47516190-47516290)
chr4 (76-148)||(50145794-50145865)
chr4 (40-142)||(29180371-29180473)
chr4 (80-142)||(49080321-49080383)
chr4 (42-153)||(52535585-52535684)
chr4 (49-141)||(32323257-32323349)
chr4 (66-148)||(31280253-31280329)
chr4 (77-155)||(5815520-5815598)
chr4 (109-155)||(17186850-17186896)
chr4 (40-142)||(29899774-29899876)
chr4 (40-142)||(30011913-30012015)
chr4 (40-142)||(30776443-30776545)
chr4 (40-142)||(37788510-37788612)
chr4 (40-142)||(39969948-39970050)
chr4 (40-142)||(49902086-49902188)
chr4 (40-142)||(50768504-50768606)
chr4 (40-142)||(53677438-53677540)
chr4 (178-215)||(17794665-17794702)
chr4 (40-142)||(28318408-28318505)
chr4 (84-141)||(29511490-29511547)
chr4 (40-141)||(38940929-38941030)
chr4 (109-153)||(5841834-5841878)
chr4 (40-148)||(53848518-53848626)
chr4 (40-147)||(8013075-8013182)
chr4 (40-155)||(25297206-25297323)
chr4 (46-97)||(31532445-31532496)
chr4 (46-88)||(7438766-7438808)
chr4 (91-153)||(8178276-8178338)
chr4 (40-142)||(10591462-10591564)
chr4 (108-142)||(23978169-23978203)
chr4 (40-142)||(37911948-37912050)
chr4 (178-215)||(1585471-1585508)
chr4 (178-215)||(14332751-14332788)
chr4 (178-215)||(20281582-20281619)
chr4 (178-215)||(20716171-20716208)
chr4 (178-215)||(26916316-26916353)
chr4 (178-215)||(29203497-29203534)
chr4 (118-155)||(35529723-35529760)
chr4 (178-215)||(56318194-56318231)
chr4 (40-134)||(5222252-5222346)
chr4 (178-212)||(25297346-25297380)
chr4 (40-142)||(32012286-32012388)
chr4 (108-142)||(40411165-40411199)
chr4 (40-134)||(47807262-47807356)
chr4 (178-212)||(47867873-47867907)
chr4 (181-215)||(55580660-55580694)
chr4 (178-215)||(10069688-10069725)
chr4 (178-215)||(28669124-28669161)
chr4 (178-215)||(39078148-39078185)
chr4 (106-155)||(40553820-40553869)
chr4 (178-215)||(41414734-41414771)
chr4 (178-215)||(52535709-52535746)
chr4 (40-72)||(32203413-32203445)
[»] chr2 (72 HSPs)
chr2 (40-155)||(19264153-19264268)
chr2 (40-155)||(6110191-6110306)
chr2 (42-155)||(28599142-28599255)
chr2 (40-155)||(3201379-3201494)
chr2 (40-155)||(35517176-35517291)
chr2 (40-153)||(11617079-11617192)
chr2 (40-155)||(45660418-45660536)
chr2 (40-155)||(45085310-45085425)
chr2 (40-155)||(8701655-8701770)
chr2 (40-155)||(12938295-12938410)
chr2 (40-154)||(24204521-24204635)
chr2 (40-155)||(6765925-6766040)
chr2 (40-155)||(25572098-25572213)
chr2 (40-155)||(29524033-29524148)
chr2 (40-146)||(35022961-35023066)
chr2 (40-141)||(43415468-43415569)
chr2 (40-155)||(9864710-9864826)
chr2 (41-155)||(33198624-33198738)
chr2 (40-155)||(41528309-41528425)
chr2 (40-147)||(7645219-7645326)
chr2 (66-155)||(14874016-14874105)
chr2 (40-155)||(35115795-35115911)
chr2 (40-152)||(40808712-40808823)
chr2 (40-155)||(33677536-33677651)
chr2 (40-153)||(28858364-28858480)
chr2 (46-154)||(5963255-5963362)
chr2 (40-142)||(32010168-32010270)
chr2 (40-131)||(11825351-11825438)
chr2 (40-142)||(26998383-26998485)
chr2 (42-142)||(32273737-32273841)
chr2 (86-155)||(40584436-40584505)
chr2 (46-142)||(38071061-38071157)
chr2 (46-153)||(44455046-44455151)
chr2 (40-135)||(33932915-33933010)
chr2 (44-141)||(23987020-23987117)
chr2 (41-147)||(4707482-4707585)
chr2 (40-142)||(4891630-4891733)
chr2 (46-153)||(30830594-30830701)
chr2 (40-142)||(792348-792450)
chr2 (40-142)||(14565365-14565467)
chr2 (40-142)||(18833902-18834004)
chr2 (40-142)||(21539819-21539921)
chr2 (96-141)||(16494974-16495019)
chr2 (54-112)||(5280536-5280595)
chr2 (40-134)||(4092081-4092175)
chr2 (40-142)||(28492582-28492684)
chr2 (40-142)||(38071442-38071544)
chr2 (40-142)||(38549635-38549737)
chr2 (40-142)||(44803960-44804062)
chr2 (178-215)||(3201319-3201356)
chr2 (178-215)||(6110331-6110368)
chr2 (178-215)||(6766064-6766101)
chr2 (178-215)||(28858302-28858339)
chr2 (178-215)||(41528249-41528286)
chr2 (178-215)||(45085250-45085287)
chr2 (106-142)||(8032726-8032762)
chr2 (46-82)||(32428100-32428136)
chr2 (40-140)||(35832476-35832576)
chr2 (106-153)||(9709568-9709615)
chr2 (44-142)||(29514471-29514569)
chr2 (181-215)||(30421315-30421349)
chr2 (178-212)||(35517119-35517153)
chr2 (40-142)||(43075812-43075913)
chr2 (181-215)||(45660358-45660392)
chr2 (178-215)||(7645360-7645397)
chr2 (46-155)||(9294704-9294813)
chr2 (178-215)||(28599278-28599315)
chr2 (103-136)||(30421237-30421270)
chr2 (178-215)||(33198761-33198798)
chr2 (40-140)||(10979233-10979333)
chr2 (179-215)||(12938235-12938271)
chr2 (109-141)||(44442198-44442230)
[»] chr7 (75 HSPs)
chr7 (40-155)||(18102583-18102698)
chr7 (40-155)||(46760249-46760364)
chr7 (40-155)||(6191098-6191213)
chr7 (40-155)||(45486008-45486123)
chr7 (42-155)||(25944629-25944742)
chr7 (40-155)||(14805923-14806037)
chr7 (40-155)||(15252917-15253031)
chr7 (40-155)||(25737619-25737734)
chr7 (40-155)||(19912761-19912876)
chr7 (40-155)||(35923305-35923419)
chr7 (40-149)||(12632336-12632445)
chr7 (40-155)||(4910627-4910740)
chr7 (59-155)||(20123691-20123787)
chr7 (40-155)||(47779657-47779772)
chr7 (48-155)||(44682930-44683037)
chr7 (40-155)||(22632142-22632257)
chr7 (40-154)||(16917525-16917639)
chr7 (42-154)||(14574618-14574730)
chr7 (84-153)||(35068885-35068954)
chr7 (40-140)||(35887961-35888061)
chr7 (42-154)||(15995773-15995886)
chr7 (66-155)||(2610586-2610675)
chr7 (42-142)||(40560443-40560543)
chr7 (54-155)||(48413771-48413867)
chr7 (42-142)||(48879449-48879549)
chr7 (103-154)||(9158143-9158194)
chr7 (40-139)||(37767011-37767110)
chr7 (40-142)||(9818529-9818631)
chr7 (40-142)||(10720454-10720556)
chr7 (103-155)||(4069056-4069108)
chr7 (42-142)||(41815646-41815746)
chr7 (92-155)||(31549947-31550010)
chr7 (40-155)||(33153087-33153202)
chr7 (71-147)||(47557622-47557700)
chr7 (40-142)||(19933006-19933108)
chr7 (40-142)||(35181253-35181355)
chr7 (54-135)||(11780090-11780171)
chr7 (96-141)||(31769010-31769055)
chr7 (40-142)||(10248594-10248698)
chr7 (106-153)||(24151640-24151687)
chr7 (44-142)||(3157497-3157595)
chr7 (40-142)||(7989259-7989361)
chr7 (40-142)||(18206270-18206372)
chr7 (40-142)||(22111281-22111383)
chr7 (40-142)||(40583206-40583308)
chr7 (40-134)||(42617740-42617834)
chr7 (40-142)||(43107856-43107958)
chr7 (178-215)||(12633117-12633154)
chr7 (178-215)||(18102523-18102560)
chr7 (178-215)||(20123810-20123847)
chr7 (178-215)||(25944569-25944606)
chr7 (46-142)||(19964151-19964247)
chr7 (46-89)||(19492391-19492434)
chr7 (40-147)||(29713250-29713357)
chr7 (43-82)||(31549751-31549790)
chr7 (40-147)||(38260377-38260484)
chr7 (181-215)||(6191038-6191072)
chr7 (107-153)||(8015732-8015778)
chr7 (178-212)||(14805866-14805900)
chr7 (178-212)||(15252860-15252894)
chr7 (40-142)||(23106514-23106616)
chr7 (178-212)||(25737757-25737791)
chr7 (40-134)||(34808288-34808382)
chr7 (178-212)||(35923248-35923282)
chr7 (106-140)||(39170602-39170636)
chr7 (40-142)||(41889232-41889334)
chr7 (40-142)||(44600507-44600609)
chr7 (178-212)||(45485951-45485985)
chr7 (178-212)||(46760387-46760421)
chr7 (178-215)||(4910763-4910800)
chr7 (178-215)||(9158083-9158120)
chr7 (182-215)||(11780011-11780044)
chr7 (40-81)||(27810738-27810779)
chr7 (178-215)||(35068965-35069002)
chr7 (78-134)||(48937878-48937934)
[»] chr6 (30 HSPs)
chr6 (40-155)||(21542471-21542586)
chr6 (42-155)||(11082240-11082353)
chr6 (40-155)||(35129047-35129163)
chr6 (40-155)||(34177634-34177749)
chr6 (46-155)||(30794191-30794300)
chr6 (40-155)||(7274868-7274983)
chr6 (46-155)||(3095719-3095827)
chr6 (40-155)||(12461422-12461537)
chr6 (40-136)||(5822027-5822123)
chr6 (40-155)||(17751737-17751852)
chr6 (40-141)||(14573121-14573221)
chr6 (40-142)||(4032051-4032156)
chr6 (84-142)||(16524443-16524501)
chr6 (40-96)||(9428857-9428913)
chr6 (40-147)||(5881746-5881852)
chr6 (84-142)||(4988007-4988065)
chr6 (106-148)||(5300659-5300701)
chr6 (96-142)||(16013481-16013527)
chr6 (40-141)||(15830760-15830861)
chr6 (47-142)||(17598355-17598450)
chr6 (40-140)||(17721802-17721902)
chr6 (40-148)||(21964013-21964121)
chr6 (40-140)||(30766510-30766610)
chr6 (178-212)||(3095850-3095884)
chr6 (40-142)||(10227974-10228076)
chr6 (178-212)||(11082376-11082410)
chr6 (40-142)||(12278768-12278870)
chr6 (178-212)||(34177772-34177806)
chr6 (106-139)||(3888494-3888527)
chr6 (178-215)||(31107184-31107221)
[»] chr1 (112 HSPs)
chr1 (40-155)||(15959633-15959748)
chr1 (40-155)||(2126091-2126206)
chr1 (40-155)||(24190522-24190637)
chr1 (40-155)||(6786891-6787006)
chr1 (40-155)||(11241080-11241195)
chr1 (40-155)||(32623998-32624113)
chr1 (40-155)||(33369604-33369718)
chr1 (40-155)||(39555579-39555694)
chr1 (41-155)||(6785509-6785622)
chr1 (40-153)||(28016739-28016852)
chr1 (40-155)||(35691446-35691560)
chr1 (44-155)||(42965813-42965923)
chr1 (43-148)||(7467958-7468064)
chr1 (40-148)||(52984993-52985101)
chr1 (48-155)||(12448969-12449075)
chr1 (40-155)||(43667296-43667411)
chr1 (40-155)||(45226191-45226306)
chr1 (51-154)||(3861699-3861802)
chr1 (40-155)||(13136547-13136661)
chr1 (40-155)||(32983165-32983278)
chr1 (40-155)||(44148829-44148944)
chr1 (40-150)||(40718736-40718846)
chr1 (40-155)||(3076348-3076463)
chr1 (40-153)||(33431614-33431727)
chr1 (46-151)||(46543039-46543144)
chr1 (42-155)||(46818497-46818610)
chr1 (40-155)||(24728619-24728735)
chr1 (40-155)||(30221778-30221893)
chr1 (41-155)||(47014487-47014599)
chr1 (51-155)||(39932576-39932680)
chr1 (40-146)||(3875012-3875116)
chr1 (45-154)||(1820469-1820578)
chr1 (40-155)||(28120748-28120863)
chr1 (40-152)||(1034913-1035023)
chr1 (40-155)||(32318553-32318668)
chr1 (40-140)||(32742195-32742295)
chr1 (41-115)||(4672924-4672998)
chr1 (41-154)||(47600030-47600146)
chr1 (59-147)||(2246026-2246114)
chr1 (59-155)||(37735395-37735491)
chr1 (65-155)||(25391735-25391824)
chr1 (40-142)||(30701378-30701480)
chr1 (49-154)||(47302910-47303012)
chr1 (40-153)||(16688191-16688304)
chr1 (91-155)||(10558800-10558864)
chr1 (40-142)||(7397772-7397874)
chr1 (84-154)||(43765348-43765418)
chr1 (40-142)||(45840059-45840160)
chr1 (40-142)||(50176588-50176690)
chr1 (98-154)||(50370015-50370071)
chr1 (106-153)||(5858430-5858477)
chr1 (42-153)||(35366198-35366309)
chr1 (40-153)||(5950494-5950610)
chr1 (40-142)||(23873823-23873925)
chr1 (40-142)||(38942437-38942539)
chr1 (98-155)||(16854193-16854250)
chr1 (40-153)||(37538864-37538977)
chr1 (107-155)||(6787050-6787098)
chr1 (103-142)||(13351746-13351785)
chr1 (92-155)||(23392211-23392274)
chr1 (44-142)||(25185300-25185399)
chr1 (40-155)||(7875933-7876050)
chr1 (106-148)||(8889756-8889798)
chr1 (40-134)||(26907087-26907181)
chr1 (40-142)||(28916511-28916613)
chr1 (40-142)||(43656033-43656135)
chr1 (178-215)||(11241036-11241073)
chr1 (40-141)||(35941904-35942005)
chr1 (40-145)||(36383987-36384092)
chr1 (178-215)||(43667432-43667469)
chr1 (40-153)||(52841438-52841551)
chr1 (46-155)||(298667-298777)
chr1 (106-141)||(15912265-15912300)
chr1 (40-142)||(15285865-15285967)
chr1 (40-142)||(25990810-25990912)
chr1 (40-142)||(35884273-35884375)
chr1 (40-142)||(46949383-46949485)
chr1 (178-215)||(1820408-1820445)
chr1 (178-215)||(7468094-7468131)
chr1 (178-215)||(12449098-12449135)
chr1 (178-215)||(15959771-15959808)
chr1 (178-215)||(25391677-25391714)
chr1 (178-215)||(32624136-32624173)
chr1 (178-215)||(33369546-33369583)
chr1 (178-215)||(39555717-39555754)
chr1 (178-215)||(40718671-40718708)
chr1 (40-141)||(44510212-44510313)
chr1 (178-215)||(45226131-45226168)
chr1 (43-136)||(46803667-46803760)
chr1 (178-215)||(47600170-47600207)
chr1 (40-153)||(51338891-51339003)
chr1 (40-153)||(51840489-51840601)
chr1 (40-142)||(40220118-40220223)
chr1 (181-215)||(2246148-2246182)
chr1 (41-75)||(6304791-6304825)
chr1 (40-142)||(15311239-15311341)
chr1 (44-142)||(18036606-18036704)
chr1 (178-212)||(35691388-35691422)
chr1 (40-142)||(40935609-40935711)
chr1 (40-153)||(41063796-41063910)
chr1 (40-142)||(49924481-49924583)
chr1 (178-215)||(3875152-3875189)
chr1 (178-215)||(6785449-6785486)
chr1 (178-215)||(6786831-6786868)
chr1 (178-215)||(28016875-28016912)
chr1 (178-215)||(28120886-28120923)
chr1 (178-215)||(32983301-32983338)
chr1 (178-215)||(39932703-39932740)
chr1 (178-215)||(42965945-42965982)
chr1 (178-215)||(47014622-47014658)
chr1 (178-215)||(50012584-50012621)
chr1 (40-99)||(50012687-50012747)
[»] chr3 (109 HSPs)
chr3 (40-154)||(46711610-46711724)
chr3 (40-155)||(14752160-14752275)
chr3 (40-155)||(30189628-30189743)
chr3 (40-155)||(37042369-37042484)
chr3 (44-153)||(37075019-37075128)
chr3 (40-155)||(35963209-35963324)
chr3 (40-155)||(50650989-50651104)
chr3 (44-155)||(11054267-11054379)
chr3 (40-155)||(7866435-7866550)
chr3 (40-155)||(23910465-23910580)
chr3 (40-155)||(28875463-28875578)
chr3 (40-154)||(6075139-6075253)
chr3 (40-153)||(9264610-9264723)
chr3 (46-155)||(23311551-23311660)
chr3 (40-153)||(36546601-36546714)
chr3 (40-153)||(36561601-36561714)
chr3 (40-155)||(29235244-29235359)
chr3 (40-151)||(31836980-31837091)
chr3 (40-154)||(47864249-47864363)
chr3 (40-155)||(579097-579205)
chr3 (44-155)||(26724947-26725058)
chr3 (40-155)||(54464848-54464962)
chr3 (40-145)||(41476287-41476393)
chr3 (66-155)||(6438140-6438229)
chr3 (40-154)||(2927347-2927462)
chr3 (40-147)||(26208079-26208186)
chr3 (46-155)||(32619787-32619897)
chr3 (41-155)||(19464132-19464248)
chr3 (40-155)||(50730166-50730281)
chr3 (40-155)||(50782573-50782688)
chr3 (40-155)||(53270292-53270406)
chr3 (40-155)||(8703165-8703277)
chr3 (40-155)||(9055052-9055164)
chr3 (40-142)||(10114975-10115077)
chr3 (54-155)||(20847235-20847335)
chr3 (40-155)||(47115906-47116021)
chr3 (40-142)||(10014333-10014435)
chr3 (40-142)||(10252075-10252177)
chr3 (40-148)||(33973518-33973627)
chr3 (43-142)||(22479009-22479108)
chr3 (40-153)||(8096970-8097083)
chr3 (40-153)||(31292664-31292777)
chr3 (40-155)||(8769531-8769644)
chr3 (40-153)||(34194941-34195054)
chr3 (43-155)||(3084135-3084247)
chr3 (84-152)||(3972335-3972402)
chr3 (84-152)||(3997476-3997543)
chr3 (106-154)||(34722623-34722671)
chr3 (40-142)||(31126275-31126377)
chr3 (40-142)||(55400801-55400903)
chr3 (40-137)||(25242130-25242227)
chr3 (40-142)||(38401444-38401550)
chr3 (40-155)||(8764631-8764744)
chr3 (106-153)||(16033005-16033052)
chr3 (47-142)||(22455967-22456062)
chr3 (40-155)||(30612228-30612343)
chr3 (106-153)||(46918231-46918278)
chr3 (46-132)||(17587779-17587865)
chr3 (40-142)||(21214305-21214410)
chr3 (40-142)||(34022662-34022764)
chr3 (106-148)||(54725628-54725670)
chr3 (41-138)||(47443927-47444023)
chr3 (40-140)||(21654310-21654410)
chr3 (50-153)||(30454687-30454789)
chr3 (40-142)||(28793225-28793327)
chr3 (40-137)||(46557122-46557219)
chr3 (40-82)||(47866876-47866918)
chr3 (178-215)||(6075078-6075115)
chr3 (118-155)||(6752727-6752764)
chr3 (178-215)||(7866573-7866610)
chr3 (44-153)||(7886573-7886682)
chr3 (178-215)||(37074955-37074992)
chr3 (178-215)||(47864188-47864225)
chr3 (178-215)||(50730106-50730143)
chr3 (178-215)||(50782711-50782748)
chr3 (178-213)||(14752298-14752333)
chr3 (40-142)||(37324038-37324141)
chr3 (40-155)||(51309463-51309578)
chr3 (181-215)||(6438080-6438114)
chr3 (181-215)||(8703106-8703140)
chr3 (181-215)||(9054993-9055027)
chr3 (178-212)||(11054398-11054432)
chr3 (178-212)||(23311683-23311717)
chr3 (40-142)||(26641067-26641169)
chr3 (178-212)||(30189570-30189604)
chr3 (40-142)||(32322194-32322296)
chr3 (181-215)||(33974652-33974686)
chr3 (181-215)||(36546539-36546573)
chr3 (181-215)||(36561742-36561776)
chr3 (178-212)||(37042507-37042541)
chr3 (178-212)||(50651127-50651161)
chr3 (178-215)||(579228-579265)
chr3 (182-215)||(9264005-9264038)
chr3 (178-211)||(20847358-20847391)
chr3 (178-215)||(23910585-23910622)
chr3 (178-215)||(28875403-28875440)
chr3 (178-215)||(29235190-29235227)
chr3 (178-215)||(32619920-32619957)
chr3 (178-207)||(34722695-34722724)
chr3 (180-213)||(36509550-36509583)
chr3 (178-215)||(41476419-41476456)
chr3 (178-215)||(48802570-48802607)
chr3 (178-215)||(53270230-53270267)
chr3 (178-215)||(54464985-54465022)
chr3 (84-140)||(6784390-6784446)
chr3 (46-142)||(45347674-45347770)
chr3 (78-142)||(45781460-45781524)
chr3 (46-94)||(46303689-46303737)
chr3 (106-142)||(48291886-48291922)
[»] scaffold0300 (2 HSPs)
scaffold0300 (40-155)||(566-681)
scaffold0300 (178-212)||(704-738)
[»] scaffold0045 (2 HSPs)
scaffold0045 (40-155)||(78010-78125)
scaffold0045 (178-215)||(77950-77987)
[»] scaffold0062 (1 HSPs)
scaffold0062 (40-155)||(44764-44879)
[»] scaffold0442 (2 HSPs)
scaffold0442 (44-155)||(10098-10209)
scaffold0442 (178-215)||(10038-10075)
[»] scaffold0774 (2 HSPs)
scaffold0774 (66-155)||(3447-3536)
scaffold0774 (178-215)||(3559-3596)
[»] scaffold0009 (1 HSPs)
scaffold0009 (44-155)||(157847-157958)
[»] scaffold0018 (2 HSPs)
scaffold0018 (46-155)||(154914-155022)
scaffold0018 (181-213)||(154856-154888)
[»] scaffold0132 (2 HSPs)
scaffold0132 (40-155)||(1065-1180)
scaffold0132 (40-155)||(9025-9140)
[»] scaffold0111 (1 HSPs)
scaffold0111 (65-153)||(40234-40321)
[»] scaffold0565 (1 HSPs)
scaffold0565 (40-137)||(5868-5965)
[»] scaffold0330 (1 HSPs)
scaffold0330 (40-142)||(3234-3336)
[»] scaffold1786 (1 HSPs)
scaffold1786 (92-155)||(900-963)
[»] scaffold1157 (1 HSPs)
scaffold1157 (42-152)||(1655-1772)
[»] scaffold0012 (1 HSPs)
scaffold0012 (84-155)||(160303-160374)
[»] scaffold0010 (1 HSPs)
scaffold0010 (40-153)||(160912-161025)
[»] scaffold0495 (1 HSPs)
scaffold0495 (40-142)||(4692-4794)


Alignment Details
Target: chr8 (Bit Score: 112; Significance: 8e-57; HSPs: 89)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 34890168 - 34890283
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  34890168 tcacacttattaagaaaactaaaacataagaatttggagtataattttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 34890267  T
Q  140 tggctattggttatgg 155  Q
    ||||||||||||||||    
T  34890268 tggctattggttatgg 34890283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 36190938 - 36190823
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||| |||||||||||||||||||||||||| ||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  36190938 tcacacttgttaagaaaactaaaacataagaatttagagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 36190839  T
Q  140 tggctattggttatgg 155  Q
    ||||||||||||||||    
T  36190838 tggctattggttatgg 36190823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 43216341 - 43216456
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  43216341 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 43216440  T
Q  140 tggctattggttatgg 155  Q
    |  |||||||||||||    
T  43216441 tcactattggttatgg 43216456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 26483698 - 26483583
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  26483698 tcacacttattaagaaaactaaaacataagaatttgaagtatagttttttgtgttttctttgaaaaaagttttatagggagatgtaaaaacaattttcat 26483599  T
Q  140 tggctattggttatgg 155  Q
    ||||||||| ||||||    
T  26483598 tggctattgattatgg 26483583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 13143939 - 13144055
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttg-gaaaaagttttataggaagatgtaaaaacaattttca 138  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||  ||||||||||||||||||||||||||||||||||||    
T  13143939 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgaaaaaaagttttataggaagatgtaaaaacaattttca 13144038  T
Q  139 ttggctattggttatgg 155  Q
    || | ||||||||||||    
T  13144039 ttagttattggttatgg 13144055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 7022397 - 7022512
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||| ||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||| |||||||||||||||||||| |||||| |||||||||    
T  7022397 tcacatttattaagaaaactaaaacataaaaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatataaaaataattttcat 7022496  T
Q  140 tggctattggttatgg 155  Q
    ||||||||||||||||    
T  7022497 tggctattggttatgg 7022512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 7858694 - 7858579
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||||| |||||| |||| |||||||||||||||||||||||||||||||||||||    
T  7858694 tcacatttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttatttgaaaaaagttttataggaagatgtaaaaacaattttcat 7858595  T
Q  140 tggctattggttatgg 155  Q
    || | |||| ||||||    
T  7858594 tgaccattgattatgg 7858579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 29920262 - 29920377
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||| |||| ||||||||| |||||| || ||||||||||||||||||||||||    
T  29920262 tcacacttattaagaaaactaaaacataagaatttgaagtacaattttttgtgttatctttggaataagtttcatgggaagatgtaaaaacaattttcat 29920361  T
Q  140 tggctattggttatgg 155  Q
    ||||||||| ||||||    
T  29920362 tggctattgattatgg 29920377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 30575828 - 30575944
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaag-ttttataggaagatgtaaaaacaattttca 138  Q
    ||||||||||||||||||||||||||||| ||||||||||| | |||||| ||||||||||  |||||| ||||| ||||| ||||||||||||||||||    
T  30575828 tcacacttattaagaaaactaaaacataaaaatttggagtaaagttttttgtgttttctttaaaaaaagtttttacaggaaaatgtaaaaacaattttca 30575927  T
Q  139 ttggctattggttatgg 155  Q
    |||||||||||||||||    
T  30575928 ttggctattggttatgg 30575944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 41 - 155
Target Start/End: Complemental strand, 24893006 - 24892889
Alignment:
Q  41 cacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagat---gtaaaaacaattttc 137  Q
    ||||||||||||||||||| |||||||||||||| ||||||| |||||| |||||||||||||||| ||||||||||| |||    ||||||||||||||    
T  24893006 cacacttattaagaaaacttaaacataagaatttagagtatagttttttgtgttttctttggaaaacgttttataggaggatataataaaaacaattttc 24892907  T
Q  138 attggctattggttatgg 155  Q
    ||||||||||||||||||    
T  24892906 attggctattggttatgg 24892889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 8712038 - 8711928
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||| ||||||||||||||    ||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||| |||||||||    
T  8712038 tcacacttattaaaaaaactaaaacata----tttggagtatagttttttgtgtttt-tttggaaaaagttttataggaagatgtaaaaataattttcat 8711944  T
Q  140 tggctattggttatgg 155  Q
    ||||||||||||||||    
T  8711943 tggctattggttatgg 8711928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 42 - 155
Target Start/End: Complemental strand, 28348774 - 28348661
Alignment:
Q  42 acacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattg 141  Q
    |||| ||||| |||||  ||||||||||||||||||||||| | |||| | ||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  28348774 acacatattacgaaaataaaaacataagaatttggagtatagtattttgtattttctttggaaaaagttttataggaatatgtaaaaacaatttccattg 28348675  T
Q  142 gctattggttatgg 155  Q
    ||||||||||||||    
T  28348674 gctattggttatgg 28348661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 40 - 154
Target Start/End: Original strand, 34158284 - 34158399
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaa-agttttataggaagatgtaaaaacaattttca 138  Q
    ||||| |||||||||||| |||||||||||||| ||||||||| ||| || ||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  34158284 tcacatttattaagaaaattaaaacataagaatctggagtatagtttgttgtgttttctttaaaaaaaagttttataggaagatgtaaaaacaattttca 34158383  T
Q  139 ttggctattggttatg 154  Q
    ||| ||||||||||||    
T  34158384 ttgactattggttatg 34158399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 66 - 155
Target Start/End: Complemental strand, 31734255 - 31734166
Alignment:
Q  66 taagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 155  Q
    ||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  31734255 taagaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatataaaaacaattttcattggctattggatatgg 31734166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 40 - 147
Target Start/End: Original strand, 35456014 - 35456125
Alignment:
Q  40 tcacacttattaagaaaacta-----aaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaatt 134  Q
    |||||||||||||||||||||     ||||||||||||||| |||||| ||||||||||||| |||| |||||||||||||| |||||||||||||||||    
T  35456014 tcacacttattaagaaaactagtgtaaaacataagaatttgaagtatagttttttatgttttttttg-aaaaagttttatagaaagatgtaaaaacaatt 35456112  T
Q  135 ttcattggctatt 147  Q
    |||||||||||||    
T  35456113 ttcattggctatt 35456125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 15957903 - 15958020
Alignment:
Q  40 tcacacttattaagaaaa--ctaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 137  Q
    ||||||||||||| ||||  |||||| ||||||| |||||||||| ||| || ||||||||||| ||||||||||||||||| | |||||||||||||||    
T  15957903 tcacacttattaaaaaaaaactaaaatataagaaattggagtatagtttattgtgttttctttgaaaaaagttttataggaataagtaaaaacaattttc 15958002  T
Q  138 attggctattggttatgg 155  Q
    ||| ||||||||||||||    
T  15958003 atttgctattggttatgg 15958020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 40 - 154
Target Start/End: Original strand, 16358106 - 16358219
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||| ||||| |||| |||||| |||||| |||||| |||||||||| |||||||||| |||||||||||||||| ||||||||||    
T  16358106 tcacacttattaagaaaattaaaatataaaaatttgaagtatagttttttttgttttcttt-gaaaaagtttcataggaagatgtaaaatcaattttcat 16358204  T
Q  140 tggctattggttatg 154  Q
    || |||||| |||||    
T  16358205 tgactattgattatg 16358219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 54 - 155
Target Start/End: Complemental strand, 35525737 - 35525638
Alignment:
Q  54 aaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttat 153  Q
    ||||||||||||||||||||| ||||||| |||| |  |||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  35525737 aaaactaaaacataagaatttagagtatagttttgt--gttttctttgaaaaaagttttacaggaagatgtaaaaacaattttcattgactattggttat 35525640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 46 - 155
Target Start/End: Original strand, 41086386 - 41086495
Alignment:
Q  46 ttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggcta 145  Q
    |||||||||||||||||  |||| |||||| | |||| |||||| ||||||||||| |||||||||||||  ||||||||||||||||||||||||||||    
T  41086386 ttattaagaaaactaaataataaaaatttgaattatagttttttgtgttttctttgaaaaaagttttatataaagatgtaaaaacaattttcattggcta 41086485  T
Q  146 ttggttatgg 155  Q
    ||||| ||||    
T  41086486 ttggtaatgg 41086495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 66 - 151
Target Start/End: Complemental strand, 13143904 - 13143819
Alignment:
Q  66 taagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggtt 151  Q
    |||||||||| ||||||||||||| ||||||| ||| ||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  13143904 taagaatttgaagtataattttttgtgttttcgttgaaaaaagtttcataggaagatgtaaaaacaattttcattggctgttggtt 13143819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 8709780 - 8709895
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||| ||| ||||||||||||||||||||||||||||| |||||| ||||||||||| || |||| | || |||||| ||||||||| |||||||    
T  8709780 tcacacttaataaaaaaactaaaacataagaatttggagtatagttttttgtgttttctttgaaataagtctcatgggaagaagtaaaaacatttttcat 8709879  T
Q  140 tggctattggttatgg 155  Q
    || ||||  |||||||    
T  8709880 tgactatatgttatgg 8709895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 46 - 155
Target Start/End: Original strand, 8107617 - 8107727
Alignment:
Q  46 ttattaagaaaactaaaacataagaatttggagtataatttttta-tgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggct 144  Q
    ||||||| |||| ||||| |||||||||||||||||| ||||||  | ||||||||| ||||||||||| |  | |||||||||||||||||||||||||    
T  8107617 ttattaaaaaaattaaaatataagaatttggagtatagtttttttgtattttctttgaaaaaagttttacaatatgatgtaaaaacaattttcattggct 8107716  T
Q  145 attggttatgg 155  Q
    |||||||||||    
T  8107717 attggttatgg 8107727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 40 - 122
Target Start/End: Complemental strand, 2053029 - 2052947
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagat 122  Q
    ||||||||||||||||||||||||||||| |||| | ||||||||||||| |||||||||| ||| ||||||||| |||||||    
T  2053029 tcacacttattaagaaaactaaaacataataattagaagtataattttttgtgttttctttagaataagttttatgggaagat 2052947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 54 - 155
Target Start/End: Original strand, 16879400 - 16879501
Alignment:
Q  54 aaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttat 153  Q
    |||||||||| ||||||||||| ||||||||||||| ||||||||||| || || ||| || |||| |||||||||||||||| |||| |||||| ||||    
T  16879400 aaaactaaaatataagaatttgaagtataattttttgtgttttctttgaaataaatttcatgggaatatgtaaaaacaatttttattgactattgattat 16879499  T
Q  154 gg 155  Q
    ||    
T  16879500 gg 16879501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 41 - 142
Target Start/End: Original strand, 41362302 - 41362403
Alignment:
Q  41 cacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcatt 140  Q
    |||| ||||||||||||||||||||||  | |||| |  ||| |||||| |||| |||||| || |||||||||||||||||||||||||||||||||||    
T  41362302 cacatttattaagaaaactaaaacatagtagtttgtaacatagttttttgtgttatctttgaaataagttttataggaagatgtaaaaacaattttcatt 41362401  T
Q  141 gg 142  Q
    ||    
T  41362402 gg 41362403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 50 - 134
Target Start/End: Original strand, 15824641 - 15824725
Alignment:
Q  50 taagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaatt 134  Q
    |||||||||||||||||||||||||| |||||| |||||| |||||||||| ||| |||||| || | |||||||||||||||||    
T  15824641 taagaaaactaaaacataagaatttgaagtatagttttttgtgttttctttagaataagtttcatggaaagatgtaaaaacaatt 15824725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 40 - 148
Target Start/End: Original strand, 44663786 - 44663891
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||||  |||||||||| ||||||| ||| |   ||||||||||||| || |||||| | |||||||||||| |||||| ||    
T  44663786 tcacacttattaagaaaactaaattataagaatttagagtatagtttgt---gttttctttggaataaattttatggaaagatgtaaaaataatttttat 44663882  T
Q  140 tggctattg 148  Q
    |||||||||    
T  44663883 tggctattg 44663891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 40 - 153
Target Start/End: Complemental strand, 17713389 - 17713276
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||| ||||||||||||||  | |||| |  ||| ||| || |||| || ||| || ||||||||||||||||| ||||||||||||||||    
T  17713389 tcacacttattaaaaaaactaaaacatagtattttgcaacatagtttcttgtgttatccttgaaataagttttataggaagatttaaaaacaattttcat 17713290  T
Q  140 tggctattggttat 153  Q
    ||| ||||||||||    
T  17713289 tggttattggttat 17713276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 7499881 - 7499778
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||| |||||||||||||||||||||| |||||| |||||||| |||||  |||||||||| ||            |||||||||||||||||||||||    
T  7499881 tcacatttattaagaaaactaaaacataggaatttagagtataactttttgcgttttctttgaaa------------gaagatgtaaaaacaattttcat 7499794  T
Q  140 tggctattggttatgg 155  Q
    ||||||||||||||||    
T  7499793 tggctattggttatgg 7499778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 17336908 - 17336806
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||||| |||  | |||| |  ||| |||||| |||  |||||| || || |||||||||||||||||||||||||||||||    
T  17336908 tcacacttattaagaaaactaaaatatagtagtttgtaacatagttttttgtgtcatctttgaaataaattttataggaagatgtaaaaacaattttcat 17336809  T
Q  140 tgg 142  Q
    |||    
T  17336808 tgg 17336806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 40 - 153
Target Start/End: Complemental strand, 8712690 - 8712577
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||| ||||||||||||||||||||||  || ||| ||| || ||| || |||| |  |||||| ||||||||||| ||||||||||||||||||| ||    
T  8712690 tcacatttattaagaaaactaaaacatagtaacttgcagtttagtttcttgtgttattattggaataagttttatagaaagatgtaaaaacaatttttat 8712591  T
Q  140 tggctattggttat 153  Q
    ||| |||| |||||    
T  8712590 tggttattagttat 8712577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 4046887 - 4047003
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttt-tatgttttctttggaaaaagttttataggaagatgtaaaaacaattttca 138  Q
    |||||||||||||||||| ||||  ||||||||||| || ||| ||||| | ||||||||||  || |||||| || | || ||||||||| ||||||||    
T  4046887 tcacacttattaagaaaattaaagtataagaatttgtagcatagtttttgtgtgttttctttataataagtttcatggaaatatgtaaaaataattttca 4046986  T
Q  139 ttggctattggttatgg 155  Q
    ||||| |||||||||||    
T  4046987 ttggcaattggttatgg 4047003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 103 - 149
Target Start/End: Complemental strand, 2052937 - 2052891
Alignment:
Q  103 aaaaagttttataggaagatgtaaaaacaattttcattggctattgg 149  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||    
T  2052937 aaaaagttttatgggaagatgtaaaaacaattttcattggctattgg 2052891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 3100120 - 3100018
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| || |||  |||||  |||||||||||| |||| || |||||| |||||| || | |||||||||||| |||| ||||    
T  3100120 tcacacttattaagaaaactaacacttaatgatttgaggtataattttttgtgttctcgttggaataagtttcatggaaagatgtaaaaataattctcat 3100021  T
Q  140 tgg 142  Q
    |||    
T  3100020 tgg 3100018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 153
Target Start/End: Original strand, 26954441 - 26954499
Alignment:
Q  95 ttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttat 153  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||| | ||||||||    
T  26954441 ttctttgaaataagttttataggaagatgtaaaaacaattttcattggttgttggttat 26954499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 40 - 153
Target Start/End: Original strand, 2628158 - 2628271
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||| ||||||||  | |||| |  ||| ||| || |||| || ||  || |||||||||||||||||||||||| |||||||||    
T  2628158 tcacacttattaagaaaaccaaaacatagtagtttgcaacatagtttcttgtgttatccttaaaataagttttataggaagatgtaaaaataattttcat 2628257  T
Q  140 tggctattggttat 153  Q
    ||| ||||| ||||    
T  2628258 tggttattgcttat 2628271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 89
Target Start/End: Complemental strand, 11158723 - 11158678
Alignment:
Q  44 acttattaagaaaactaaaacataagaatttggagtataatttttt 89  Q
    |||||||||||||||||||||||||||||||||| |||||||||||    
T  11158723 acttattaagaaaactaaaacataagaatttggaatataatttttt 11158678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 142
Target Start/End: Complemental strand, 8745743 - 8745647
Alignment:
Q  46 ttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 142  Q
    ||||||||||||||||||||||  | |||| |  ||| ||| || |||| |  ||| || |||||||||||||||||||||||||||||||||||||    
T  8745743 ttattaagaaaactaaaacatagtagtttgcaacatagtttcttgtgttattcttgaaataagttttataggaagatgtaaaaacaattttcattgg 8745647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 41 - 148
Target Start/End: Complemental strand, 34900090 - 34899983
Alignment:
Q  41 cacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcatt 140  Q
    |||||||||||||||||||||||||||| ||||||   |||| |||||| ||||    || ||| ||||||||||||| ||| |||||| |||||| |||    
T  34900090 cacacttattaagaaaactaaaacataataatttgcgatatatttttttgtgttcctcttagaataagttttataggaggatttaaaaataattttgatt 34899991  T
Q  141 ggctattg 148  Q
    || |||||    
T  34899990 ggttattg 34899983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 27621297 - 27621195
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| || ||   ||||| ||||||||||||| |||| |  |||||| |||||| || | |||||||||||| |||| ||||    
T  27621297 tcacacttattaagaaaactaacacttagtgatttgaagtataattttttgtgttctacttggaataagtttcatggaaagatgtaaaaataattctcat 27621198  T
Q  140 tgg 142  Q
    |||    
T  27621197 tgg 27621195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 27752753 - 27752651
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| || ||   |||||  |||||||||||| |||| || |||||| |||||| || | |||||||||||| |||| ||||    
T  27752753 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattctcat 27752654  T
Q  140 tgg 142  Q
    |||    
T  27752653 tgg 27752651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 38072329 - 38072227
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||| ||||||||||||||||||||||  | |||| |  ||| |||||| |||| |||||| |  ||||||||||  || |||||||||||||||||||    
T  38072329 tcacatttattaagaaaactaaaacatagtagtttgtaacatagttttttgtgttatctttgaattaagttttataaaaaaatgtaaaaacaattttcat 38072230  T
Q  140 tgg 142  Q
    |||    
T  38072229 tgg 38072227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 142
Target Start/End: Original strand, 40773397 - 40773499
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||| ||||||| |||||||||| |||| |||||||||||||||||| | ||||||  |  ||| ||||||||   ||||||||||||| |||||| ||    
T  40773397 tcacatttattaaaaaaactaaaatataacaatttggagtataattttgtgtgtttttctaagaataagttttaacagaagatgtaaaaataatttttat 40773496  T
Q  140 tgg 142  Q
    |||    
T  40773497 tgg 40773499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 7499754 - 7499717
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||||||||||||||||||||||||||||    
T  7499754 ttgaatgtaatttacatttaattttatgagaataaaca 7499717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 142
Target Start/End: Complemental strand, 8673550 - 8673445
Alignment:
Q  42 acacttattaagaaaactaaaacata-----agaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaatttt 136  Q
    ||||||||||||||||||||||||||     | | |||| |  ||| |||||| |||| | |||| || |||||||||| ||||||||||||||||||||    
T  8673550 acacttattaagaaaactaaaacatactgtaatagtttgtaacatagttttttgtgttatatttgaaataagttttataagaagatgtaaaaacaatttt 8673451  T
Q  137 cattgg 142  Q
    ||||||    
T  8673450 cattgg 8673445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 45190750 - 45190701
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataatttttt 89  Q
    |||||||| |||||||||||||||||||||||||||||| ||| ||||||    
T  45190750 tcacacttgttaagaaaactaaaacataagaatttggagcatagtttttt 45190701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 179 - 215
Target Start/End: Original strand, 35456157 - 35456193
Alignment:
Q  179 tgaatgtaatttacatttaattttatgagaataaaca 215  Q
    |||||||||||||||||||||||||||||||||||||    
T  35456157 tgaatgtaatttacatttaattttatgagaataaaca 35456193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 70 - 140
Target Start/End: Complemental strand, 4480911 - 4480841
Alignment:
Q  70 aatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcatt 140  Q
    |||||||||||||  ||||| |||| |||||  || ||||||||| |||||||||||||| ||||||||||    
T  4480911 aatttggagtataggtttttgtgttatctttaaaataagttttattggaagatgtaaaaataattttcatt 4480841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 11044224 - 11044122
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| || ||   |||||  |||||||||||| |||| || |||||| |||||| ||   |||||||||||| |||| ||||    
T  11044224 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatgtaaagatgtaaaaataattctcat 11044125  T
Q  140 tgg 142  Q
    |||    
T  11044124 tgg 11044122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 40 - 142
Target Start/End: Original strand, 24612474 - 24612576
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||| ||| || ||   |||||  ||||||||||||||||| || |||||| |||||| || | | |||||||||| |||| ||||    
T  24612474 tcacacttattaagaaaattaacacttagtgatttgaggtataattttttatgttctccttggaataagtttcatggaatgatgtaaaaataattctcat 24612573  T
Q  140 tgg 142  Q
    |||    
T  24612574 tgg 24612576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 84 - 142
Target Start/End: Original strand, 25195085 - 25195142
Alignment:
Q  84 ttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 142  Q
    |||||| |||| |||||| || || ||||||||||||||||||||||||||||||||||    
T  25195085 ttttttgtgttatctttgaaataa-ttttataggaagatgtaaaaacaattttcattgg 25195142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 40 - 142
Target Start/End: Original strand, 31133023 - 31133125
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| || ||   |||||  |||||||||||| |||| || |||||| || ||| || | |||||||||||| |||| ||||    
T  31133023 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataaatttcatggaaagatgtaaaaataattctcat 31133122  T
Q  140 tgg 142  Q
    |||    
T  31133123 tgg 31133125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 34713695 - 34713593
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||| |||||||||||||||| || ||   |||||  |||||||||||| ||||||  ||| || ||||||| ||| |||||||||||| |||| ||||    
T  34713695 tcacatttattaagaaaactaatacttagtgatttgaggtataattttttgtgtttttcttgaaataagttttctagaaagatgtaaaaataattctcat 34713596  T
Q  140 tgg 142  Q
    |||    
T  34713595 tgg 34713593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 35260224 - 35260122
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| || ||   |||||  |||| ||||||| |||| || |||||| |||||| || | |||||||||||| |||| ||||    
T  35260224 tcacacttattaagaaaactaacacttagtgatttgaggtatcattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattctcat 35260125  T
Q  140 tgg 142  Q
    |||    
T  35260124 tgg 35260122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 35344534 - 35344432
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| || ||   |||||  |||||||||||| |||| || ||| || |||||| || | |||||||||||| |||| ||||    
T  35344534 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttgaaataagtttcatggaaagatgtaaaaataattctcat 35344435  T
Q  140 tgg 142  Q
    |||    
T  35344434 tgg 35344432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 44052788 - 44052686
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| ||  |   |||||  |||||||||||| |||| || |||||| ||||||| | | |||||||||||| |||| ||||    
T  44052788 tcacacttattaagaaaactaacactcagtgatttgaggtataattttttgtgttctccttggaataagttttctggaaagatgtaaaaataattctcat 44052689  T
Q  140 tgg 142  Q
    |||    
T  44052688 tgg 44052686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 40 - 142
Target Start/End: Original strand, 44411203 - 44411305
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| || ||   ||||| ||||||||||||| | || || ||| || |||||| || | |||||||||||| |||| ||||    
T  44411203 tcacacttattaagaaaactaacacttagtgatttgaagtataattttttgtattctccttgaaataagtttcatggaaagatgtaaaaataattctcat 44411302  T
Q  140 tgg 142  Q
    |||    
T  44411303 tgg 44411305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 140
Target Start/End: Original strand, 3225514 - 3225617
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtata---attttttatgttttctttggaaaaagttttataggaagatgtaaaaacaatttt 136  Q
    ||||| |||||| |||||||||||||||| ||| |||||||||   | ||||||||||||| ||| || |||||| ||  ||| ||||||||| |||||     
T  3225514 tcacaattattatgaaaactaaaacataataatctggagtataagtactttttatgttttccttgaaataagtttcatgagaatatgtaaaaataatttg 3225613  T
Q  137 catt 140  Q
    ||||    
T  3225614 catt 3225617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 147
Target Start/End: Complemental strand, 6401784 - 6401679
Alignment:
Q  42 acacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattg 141  Q
    ||||||||||||||| |||||| |||  |||||| |||||| |||||| |||| |  ||| || ||||||  ||  |||||||||||||||||| |||||    
T  6401784 acacttattaagaaatctaaaatatagtaatttgtagtatagttttttgtgttattcttgaaataagtttcctaaaaagatgtaaaaacaatttccattg 6401685  T
Q  142 gctatt 147  Q
    | ||||    
T  6401684 gttatt 6401679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 13143792 - 13143755
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  13143792 ttgaatgtaatttgcatttaattttatgagaataaaca 13143755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 15958045 - 15958082
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  15958045 ttgaatgtaatttgcatttaattttatgagaataaaca 15958082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 24892866 - 24892829
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  24892866 ttgaatgtaatttgcatttaattttatgagaataaaca 24892829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 34890306 - 34890343
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  34890306 ttgaatgtaatttgcatttaattttatgagaataaaca 34890343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 36190800 - 36190763
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  36190800 ttgaatgtaatttgcatttaattttatgagaataaaca 36190763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 155
Target Start/End: Original strand, 3642039 - 3642078
Alignment:
Q  115 aggaagatgtaaaaacaattttcattggctattggttatgg 155  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  3642039 aggaagatgtaaaaacaatttt-attggctattggttatgg 3642078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 140
Target Start/End: Original strand, 4038876 - 4038975
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||| |||| |||||||||  | |||| |  ||| |||||  |||| | |||| || |||||||||| |||||||||||||||||||||||    
T  4038876 tcacacttattaaaaaaattaaaacatagtagtttgtaacatagtttttg-tgttatttttgaaataagttttatatgaagatgtaaaaacaattttcat 4038974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 24510691 - 24510804
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||| ||||| ||||||||  | ||||  |||||||||| |  |||||  |||||| |||||| || | ||||||||||||||||||| ||    
T  24510691 tcacacttattaataaaacaaaaacatagtagtttgaggtataattttgt--gtttttattggaataagtttcatggaaagatgtaaaaacaatttttat 24510788  T
Q  140 tggctattggttatgg 155  Q
    ||| || || ||||||    
T  24510789 tggttaatgattatgg 24510804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 214
Target Start/End: Complemental strand, 28348639 - 28348603
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaac 214  Q
    ||||||||||||| |||||||||||||||||||||||    
T  28348639 ttgaatgtaatttgcatttaattttatgagaataaac 28348603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 141
Target Start/End: Original strand, 33563501 - 33563606
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttgg----aaaaagttttataggaagatgtaaaaacaattt 135  Q
    ||||| |||||||||||| ||||||||||||||||  | ||| | ||||| | |||| |||      || ||||||||| ||||||||||||||||||||    
T  33563501 tcacatttattaagaaaattaaaacataagaatttaaaatattactttttgtatttttttttttttaaataagttttatgggaagatgtaaaaacaattt 33563600  T
Q  136 tcattg 141  Q
    ||||||    
T  33563601 tcattg 33563606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 134
Target Start/End: Original strand, 2238589 - 2238681
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaatt 134  Q
    ||||||||||||||||||| ||||||||  | ||||  ||||||  |||| ||||||  |||||| |||||| || | |||||||||||||||||    
T  2238589 tcacacttattaagaaaacaaaaacatagtagtttgaggtataa--ttttgtgtttttcttggaataagtttcatggaaagatgtaaaaacaatt 2238681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 213
Target Start/End: Original strand, 8107749 - 8107784
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaa 213  Q
    ||||||||||||| ||||||||||||||||||||||    
T  8107749 ttgaatgtaatttgcatttaattttatgagaataaa 8107784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 153
Target Start/End: Original strand, 28497198 - 28497245
Alignment:
Q  106 aagttttataggaagatgtaaaaacaattttcattggctattggttat 153  Q
    ||||||||| |||||||||||||||||||||||||   ||||||||||    
T  28497198 aagttttatgggaagatgtaaaaacaattttcattacttattggttat 28497245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 7022535 - 7022569
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataa 212  Q
    ||||||||||||| |||||||||||||||||||||    
T  7022535 ttgaatgtaatttgcatttaattttatgagaataa 7022569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 8709916 - 8709950
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataa 212  Q
    ||||||||||||| |||||||||||||||||||||    
T  8709916 ttgaatgtaatttgcatttaattttatgagaataa 8709950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 11992895 - 11992793
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||| |||||||||||||| || ||   |||||  |||||||||||| |||| || |||||| |||||| ||   |||||||||||| |||| ||||    
T  11992895 tcacactaattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatgaaaagatgtaaaaataattctcat 11992796  T
Q  140 tgg 142  Q
    |||    
T  11992795 tgg 11992793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 141
Target Start/End: Complemental strand, 14693484 - 14693434
Alignment:
Q  91 tgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattg 141  Q
    |||| |||||| || || ||||||| |||||||||||||||||||||||||    
T  14693484 tgttatctttgaaataaattttataagaagatgtaaaaacaattttcattg 14693434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 26483560 - 26483526
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataa 212  Q
    |||||||||||||||||||||||||| ||||||||    
T  26483560 ttgaatgtaatttacatttaattttacgagaataa 26483526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 142
Target Start/End: Complemental strand, 36538185 - 36538123
Alignment:
Q  80 ataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 142  Q
    ||||||||||||||| ||||| ||| |||||| || | |||||||||||| |||| |||||||    
T  36538185 ataattttttatgttctctttagaataagtttcatggaaagatgtaaaaataattctcattgg 36538123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Original strand, 41086521 - 41086555
Alignment:
Q  181 aatgtaatttacatttaattttatgagaataaaca 215  Q
    |||||||||| ||||||||||||||||||||||||    
T  41086521 aatgtaatttgcatttaattttatgagaataaaca 41086555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Original strand, 43216482 - 43216516
Alignment:
Q  181 aatgtaatttacatttaattttatgagaataaaca 215  Q
    |||||||||| ||||||||||||||||||||||||    
T  43216482 aatgtaatttgcatttaattttatgagaataaaca 43216516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 7858556 - 7858519
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  7858556 ttgaaagtaatttgcatttaattttatgagaataaaca 7858519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 13144093 - 13144130
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  13144093 ttgaatgtaatttgcatttaattttatgaaaataaaca 13144130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 107 - 148
Target Start/End: Original strand, 14576213 - 14576254
Alignment:
Q  107 agttttataggaagatgtaaaaacaattttcattggctattg 148  Q
    |||||||||| |||||||||||| |||||||||||| |||||    
T  14576213 agttttatagaaagatgtaaaaataattttcattggttattg 14576254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 78 - 139
Target Start/End: Original strand, 25321618 - 25321679
Alignment:
Q  78 gtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||| | |||| || |||||| ||||||||| | |||||||||||| |||||||||    
T  25321618 gtataattttctgtgttctccttggaataagttttatggaaagatgtaaaaataattttcat 25321679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #85
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 31734143 - 31734106
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| |||||||||| |||||||||||||    
T  31734143 ttgaatgtaatttgcatttaatttgatgagaataaaca 31734106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #86
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 34158423 - 34158460
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  34158423 ttgaatgtaatttgcatttaattttatgataataaaca 34158460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #87
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 41755954 - 41755917
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    |||||||||||||||||||||||| |||| ||||||||    
T  41755954 ttgaatgtaatttacatttaatttcatgataataaaca 41755917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #88
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 111
Target Start/End: Complemental strand, 12108319 - 12108251
Alignment:
Q  43 cacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttt 111  Q
    ||||||||||||||||||| |  ||  |||||| ||||||||||||| |||| |||||| || ||||||    
T  12108319 cacttattaagaaaactaacatttagtaatttgaagtataattttttgtgttatctttgaaataagttt 12108251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #89
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 140
Target Start/End: Original strand, 33851057 - 33851117
Alignment:
Q  80 ataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcatt 140  Q
    |||||||||| |||| ||||||||| |||||| || | |||||||||||| |||| |||||    
T  33851057 ataattttttgtgttctctttggaataagtttcatggaaagatgtaaaaataattctcatt 33851117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 112; Significance: 8e-57; HSPs: 71)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 20644182 - 20644067
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  20644182 tcacacttattaagaaaactaaaacataagaatttggagtataattttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 20644083  T
Q  140 tggctattggttatgg 155  Q
    ||||||||||||||||    
T  20644082 tggctattggttatgg 20644067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 42273815 - 42273700
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  42273815 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataagaagatgtaaaaacaattttcat 42273716  T
Q  140 tggctattggttatgg 155  Q
    ||||||||||||||||    
T  42273715 tggctattggttatgg 42273700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 43589955 - 43590070
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||| |||||||||||||||||||||    
T  43589955 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttcttttgaaaaagttttatagggagatgtaaaaacaattttcat 43590054  T
Q  140 tggctattggttatgg 155  Q
    ||||||||||||||||    
T  43590055 tggctattggttatgg 43590070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 6686553 - 6686437
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttgga-aaaagttttataggaagatgtaaaaacaattttca 138  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  6686553 tcacatttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaaagttttataggaagatgtaaaaacaattttca 6686454  T
Q  139 ttggctattggttatgg 155  Q
    |||||||||||||||||    
T  6686453 ttggctattggttatgg 6686437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 11261877 - 11261992
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||| ||||||| |||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11261877 tcacacttattaagtaaactaacacatgagaatttggagtataattttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 11261976  T
Q  140 tggctattggttatgg 155  Q
    ||||||||||||||||    
T  11261977 tggctattggttatgg 11261992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 40 - 154
Target Start/End: Complemental strand, 20039270 - 20039156
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||| ||||||| ||    
T  20039270 tcacacttattaagaaaactaaaacataagaatttggagtataattttttgtgttttctttgaaaaaggttttataggaagatgtaaaaccaatttttat 20039171  T
Q  140 tggctattggttatg 154  Q
    |||||||||||||||    
T  20039170 tggctattggttatg 20039156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 41 - 155
Target Start/End: Complemental strand, 34425497 - 34425383
Alignment:
Q  41 cacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcatt 140  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  34425497 cacacttattaagaaaactaaaacataagaatttgaagtatagttttttgtgttttctttgaaaaaagttttataggaatatgtaaaaacaattttcatt 34425398  T
Q  141 ggctattggttatgg 155  Q
    |||||||| ||||||    
T  34425397 ggctattgattatgg 34425383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 50 - 155
Target Start/End: Original strand, 37522592 - 37522697
Alignment:
Q  50 taagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattgg 149  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  37522592 taagaaaactaaaacataagaatttggagtatagttttttgtgttttttttggaaaaagttttataggaagatgtaaaaacaattttcattggctattgt 37522691  T
Q  150 ttatgg 155  Q
    ||||||    
T  37522692 ttatgg 37522697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 37562754 - 37562870
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttcttt-ggaaaaagttttataggaagatgtaaaaacaattttca 138  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  37562754 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtttttttttggaaaaagttttataggaagatgtaaaaacaattttca 37562853  T
Q  139 ttggctattggttatgg 155  Q
    || ||||||| ||||||    
T  37562854 ttagctattgtttatgg 37562870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 47 - 155
Target Start/End: Original strand, 38130113 - 38130224
Alignment:
Q  47 tattaagaaaactaaaacataagaatttggagtataat---tttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggc 143  Q
    ||||||||||||||||||||||||||||||| |||| |   ||||| |||||||||| |||||||||||||||||| ||||||||| |||||||||||||    
T  38130113 tattaagaaaactaaaacataagaatttggaatatagtagttttttgtgttttctttagaaaaagttttataggaatatgtaaaaataattttcattggc 38130212  T
Q  144 tattggttatgg 155  Q
    ||||||||||||    
T  38130213 tattggttatgg 38130224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 46 - 155
Target Start/End: Complemental strand, 19413303 - 19413194
Alignment:
Q  46 ttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggcta 145  Q
    |||||||||||||||||  ||||||||||| || ||| |||||| ||||||||||| || ||||||||| |||||||||||||||||||||||||||| |    
T  19413303 ttattaagaaaactaaagtataagaatttgtagcatagttttttgtgttttctttgaaataagttttatgggaagatgtaaaaacaattttcattggcaa 19413204  T
Q  146 ttggttatgg 155  Q
    ||||||||||    
T  19413203 ttggttatgg 19413194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 66 - 155
Target Start/End: Complemental strand, 32111144 - 32111055
Alignment:
Q  66 taagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 155  Q
    ||||||||||||||||||| |||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  32111144 taagaatttggagtataatgttttgtgttttctttgaaaaaagtttcataggaagatgtaaaaacaattttcattgactattggttatgg 32111055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 25841032 - 25840917
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||||||| ||||| |||||| || ||| |||||| |||||||||||||| |||||| || ||||||||||||||||||||||||    
T  25841032 tcacacttattaagaaaactaaagcataaaaatttgtagcatagttttttgtgttttctttggaataagtttcatgggaagatgtaaaaacaattttcat 25840933  T
Q  140 tggctattggttatgg 155  Q
    || | |||| ||||||    
T  25840932 tgacaattgtttatgg 25840917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 44 - 151
Target Start/End: Original strand, 12912292 - 12912398
Alignment:
Q  44 acttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggc 143  Q
    |||||||||||||||||||||||| | | ||||| |||| |||||| |||| |||||| || |||||||||||||||||||||||||||||||||||||     
T  12912292 acttattaagaaaactaaaacata-gtagttggaatatagttttttgtgttatctttgaaataagttttataggaagatgtaaaaacaattttcattggt 12912390  T
Q  144 tattggtt 151  Q
    ||||||||    
T  12912391 tattggtt 12912398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 42 - 152
Target Start/End: Original strand, 43454318 - 43454428
Alignment:
Q  42 acacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattg 141  Q
    |||||||||||||||| ||||||||||||| ||| | |||| |||||| |||||||||||  | |||||||||||||| ||||||||||||||||||||     
T  43454318 acacttattaagaaaattaaaacataagaacttgaaatatagttttttgtgttttctttgtcataagttttataggaatatgtaaaaacaattttcattt 43454417  T
Q  142 gctattggtta 152  Q
     ||||||||||    
T  43454418 actattggtta 43454428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 65 - 153
Target Start/End: Original strand, 5984126 - 5984214
Alignment:
Q  65 ataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttat 153  Q
    |||||||||| ||||||| |||||| |||||||||||||| ||||||||||| || ||||||||||||||||||||| |||||||||||    
T  5984126 ataagaatttagagtatagttttttgtgttttctttggaataagttttatagaaatatgtaaaaacaattttcattgactattggttat 5984214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 17351556 - 17351441
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||| |||||||||||||||| || ||| || |||||||||| |||||| | ||||| |||||| ||||||||| | ||||||||||||||||||| ||    
T  17351556 tcacatttattaagaaaactaatacgtaaaaacttggagtatagttttttttattttcgttggaataagttttatggaaagatgtaaaaacaattttaat 17351457  T
Q  140 tggctattggttatgg 155  Q
    ||||||||| ||||||    
T  17351456 tggctattgattatgg 17351441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 59 - 147
Target Start/End: Original strand, 42104262 - 42104348
Alignment:
Q  59 taaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctatt 147  Q
    ||||||||||||||||||||||||||||| |  ||| ||||||||| |||||| || ||||||||||||||||||||||||||||||||    
T  42104262 taaaacataagaatttggagtataattttgt--gttctctttggaacaagtttcatgggaagatgtaaaaacaattttcattggctatt 42104348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 4463526 - 4463413
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||||||| |||||||||||| || ||  || | |  ||||||||||||| ||| || || |||||||||||||||||||||||     
T  4463526 tcacacttattaagaaaactaaagcataagaatttgtagcatggttgtgt--gttttctttggaataagcttcatgggaagatgtaaaaacaattttcac 4463429  T
Q  140 tggctattggttatgg 155  Q
    ||||||||||||||||    
T  4463428 tggctattggttatgg 4463413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 39505225 - 39505341
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataatttttta-tgttttctttggaaaaagttttataggaagatgtaaaaacaattttca 138  Q
    ||||||||||||| |||| ||||  ||||||||||| || ||| ||||||  |||||||||||||| ||||||||| | |||||||||||||||||||||    
T  39505225 tcacacttattaaaaaaattaaagtataagaatttgtagcatagtttttttgtgttttctttggaataagttttatggtaagatgtaaaaacaattttca 39505324  T
Q  139 ttggctattggttatgg 155  Q
    ||||| ||| |||||||    
T  39505325 ttggcaattcgttatgg 39505341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 12792779 - 12792884
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||| |||||||||||||||||| |||||||||| |||||| |||||||||         ||||||||||||| ||||| |||||||||||    
T  12792779 tcacacttattaaaaaaactaaaacataagaaattggagtatagttttttgtgttttctt---------ttttataggaaga-gtaaagacaattttcat 12792868  T
Q  140 tggctattggttatgg 155  Q
    ||||||||||||||||    
T  12792869 tggctattggttatgg 12792884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 23233579 - 23233464
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||| ||||| ||||||||||||||||||  ||||| |||||| ||||||||||| ||| |  |||||||||| ||||||||||| |||| ||    
T  23233579 tcacacttattgagaaatctaaaacataagaatttgacgtatagttttttgtgttttctttgaaaacaactttataggaatatgtaaaaacagtttttat 23233480  T
Q  140 tggctattggttatgg 155  Q
    |  |||||||||||||    
T  23233479 taactattggttatgg 23233464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 62 - 155
Target Start/End: Complemental strand, 8225608 - 8225514
Alignment:
Q  62 aacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgt-aaaaacaattttcattggctattggttatgg 155  Q
    |||| ||||||||||| |||| |||||| | ||||||||||||||||||||||||||| |||| ||||| || ||||||||||||||||||||||    
T  8225608 aacaaaagaatttggactatagttttttgtattttctttggaaaaagttttataggaaaatgtaaaaaaaaaatttcattggctattggttatgg 8225514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 12729878 - 12729982
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||| |||||||||||||||||| |||||||||| |||||| |||||||||         ||||||||||||| ||||| |||||||||||    
T  12729878 tcacacttattaa-aaaactaaaacataagaaattggagtatagttttttgtgttttctt---------ttttataggaaga-gtaaagacaattttcat 12729966  T
Q  140 tggctattggttatgg 155  Q
    ||||||||||||||||    
T  12729967 tggctattggttatgg 12729982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 52 - 154
Target Start/End: Original strand, 41625517 - 41625618
Alignment:
Q  52 agaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggtt 151  Q
    |||||||||||||||||||||||  | |||| |||||| ||||||||||| || |||||| |||||||||||||||||  ||||||||| ||||||| ||    
T  41625517 agaaaactaaaacataagaatttaaa-tatagttttttgtgttttctttgaaataagtttcataggaagatgtaaaaattattttcattcgctattgatt 41625615  T
Q  152 atg 154  Q
    |||    
T  41625616 atg 41625618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 42 - 139
Target Start/End: Complemental strand, 32079670 - 32079573
Alignment:
Q  42 acacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||||||||| | |||||||| |||| ||||||||||| || ||| ||  ||||| || | ||||||||||||||||||||||    
T  32079670 acacttattaagaaaactaaaacattataatttggattatagttttttatgttctccttgaaattagtttaatggaaagatgtaaaaacaattttcat 32079573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 40 - 140
Target Start/End: Original strand, 5736233 - 5736333
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||| |||||||||  | |||| |  ||| ||||||||||| |||||| || || |||||||||||| ||||||||||||||||||    
T  5736233 tcacacttattaagaaaattaaaacatagtagtttgtaacatagttttttatgttatctttgaaataaattttataggaagttgtaaaaacaattttcat 5736332  T
Q  140 t 140  Q
    |    
T  5736333 t 5736333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 42 - 142
Target Start/End: Complemental strand, 8506597 - 8506497
Alignment:
Q  42 acacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattg 141  Q
    ||||||||||||||||||||||||||  | |||| |  ||| ||| ||||||| || ||| || ||||||||||| ||||||||||||||||||||||||    
T  8506597 acacttattaagaaaactaaaacatagtagtttgcaacatagtttcttatgttatccttgaaataagttttatagaaagatgtaaaaacaattttcattg 8506498  T
Q  142 g 142  Q
    |    
T  8506497 g 8506497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 40 - 153
Target Start/End: Original strand, 30893243 - 30893356
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||||||||||| | ||||||||||||| ||| || ||||||  || |||  | |||||| | |||||||||||| |||||| ||    
T  30893243 tcacacttattaagaaaactaaaacatgataatttggagtatagtttcttgtgtttttcttagaattaattttatggaaagatgtaaaaataatttttat 30893342  T
Q  140 tggctattggttat 153  Q
    ||| |||| |||||    
T  30893343 tggttatttgttat 30893356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 102 - 155
Target Start/End: Complemental strand, 32017809 - 32017756
Alignment:
Q  102 gaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 155  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  32017809 gaaaacgttttataggaagatgtaaaaacaattttcattgtctattggttatgg 32017756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 49 - 118
Target Start/End: Complemental strand, 32019980 - 32019911
Alignment:
Q  49 ttaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttatagga 118  Q
    |||||||||||||||||||||||||||||||||| |||| | |||||||||| ||||| || ||||||||    
T  32019980 ttaagaaaactaaaacataagaatttggagtatagttttctgtgttttctttagaaaacgtcttatagga 32019911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 94 - 155
Target Start/End: Complemental strand, 38280961 - 38280900
Alignment:
Q  94 tttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 155  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||| ||||| ||||||    
T  38280961 tttctttgaaaaaagttttataggaaaatgtaaaaacaattttcattggttattgattatgg 38280900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 40 - 154
Target Start/End: Original strand, 9957428 - 9957526
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||  ||||||||||||||               ||||||||||||||||||||    
T  9957428 tcacacttattaagaaaactaaaacatgagaatttggagtatagtttttg-tgttttctttggaa---------------gatgtaaaaacaattttcat 9957511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 44 - 154
Target Start/End: Original strand, 104216 - 104321
Alignment:
Q  44 acttattaagaaaa--ctaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattg 141  Q
    ||||||||| ||||  ||||||||||| ||||||||||||       ||| |||| |||| |||||||||||||| |||||||||||||||||||||||     
T  104216 acttattaaaaaaaatctaaaacataaaaatttggagtat-------tatattttttttgaaaaaagttttatagaaagatgtaaaaacaattttcatta 104308  T
Q  142 gctattggttatg 154  Q
    |||||| ||||||    
T  104309 gctattagttatg 104321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 84 - 141
Target Start/End: Complemental strand, 8959764 - 8959707
Alignment:
Q  84 ttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattg 141  Q
    |||||| |||| |||||| || ||||||||||||||||||||||||||||||||||||    
T  8959764 ttttttgtgttatctttgaaataagttttataggaagatgtaaaaacaattttcattg 8959707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 150
Target Start/End: Original strand, 10153987 - 10154031
Alignment:
Q  106 aagttttataggaagatgtaaaaacaattttcattggctattggt 150  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  10153987 aagttttataggaagatgtaaaaacaattttcattggttattggt 10154031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 142
Target Start/End: Original strand, 16153353 - 16153440
Alignment:
Q  54 aaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 142  Q
    ||||||||||||||| | |||| |  ||| |||||| |||| |||||| || ||||||||||||||||||||||||| |||||||||||    
T  16153353 aaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaataagttttataggaagatgtaaaaac-attttcattgg 16153440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 106 - 153
Target Start/End: Original strand, 5369090 - 5369137
Alignment:
Q  106 aagttttataggaagatgtaaaaacaattttcattggctattggttat 153  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||    
T  5369090 aagttttataggaagatgtaaaaacaattttcattggttgttggttat 5369137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 44 - 142
Target Start/End: Complemental strand, 13146891 - 13146793
Alignment:
Q  44 acttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 142  Q
    |||||||| ||||||||| || ||   |||||  |||||||||||| |||| ||||||||| ||||||||| | |||||||||||| |||| |||||||    
T  13146891 acttattatgaaaactaacacttagtgatttgaggtataattttttgtgttctctttggaataagttttatggaaagatgtaaaaataattctcattgg 13146793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 142
Target Start/End: Original strand, 24432393 - 24432495
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| || ||   |||||  |||||||||||| |||| || |||||| |||||| || | |||||||||||| |||| ||||    
T  24432393 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattctcat 24432492  T
Q  140 tgg 142  Q
    |||    
T  24432493 tgg 24432495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 142
Target Start/End: Original strand, 25962441 - 25962543
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| || ||   |||||  |||||||||||| |||| || |||||| |||||| || | |||||||||||| |||| ||||    
T  25962441 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattctcat 25962540  T
Q  140 tgg 142  Q
    |||    
T  25962541 tgg 25962543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 142
Target Start/End: Original strand, 31690613 - 31690715
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||| ||| || ||   |||||  |||||||||||| |||| |  ||||||  |||||||||| |||||||||||| |||||||||    
T  31690613 tcacacttattaagaaaattaatacttagtgatttgaggtataattttttgtgttcttcttggaatgagttttatagaaagatgtaaaaataattttcat 31690712  T
Q  140 tgg 142  Q
    |||    
T  31690713 tgg 31690715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 145
Target Start/End: Complemental strand, 24439738 - 24439633
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||| |||  |||||||| | ||||||   ||||||||||| |||| |  |||||| |||||| || | ||||||||||||||||| ||||    
T  24439738 tcacacttattaaaaaagttaaaacattataatttgagatataattttttgtgttattcttggaataagtttcatggaaagatgtaaaaacaattatcat 24439639  T
Q  140 tggcta 145  Q
    ||||||    
T  24439638 tggcta 24439633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 153
Target Start/End: Complemental strand, 30703765 - 30703656
Alignment:
Q  44 acttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggc 143  Q
    ||||||||| ||||||||||||||  | |||  |  |||||||||| |||| |||||| || || ||||||||||||||||| ||| || |||||||||     
T  30703765 acttattaacaaaactaaaacatagtagtttacaacataattttttgtgttatctttgaaataaattttataggaagatgtataaaaaagtttcattggt 30703666  T
Q  144 tattggttat 153  Q
    ||||| ||||    
T  30703665 tattgattat 30703656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 181 - 215
Target Start/End: Original strand, 5984249 - 5984283
Alignment:
Q  181 aatgtaatttacatttaattttatgagaataaaca 215  Q
    |||||||||||||||||||||||||||||||||||    
T  5984249 aatgtaatttacatttaattttatgagaataaaca 5984283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 12639055 - 12638953
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| |  ||   |||||  |||||||||||| |||| || |||||| || |||||| | |||||||||||| |||| ||||    
T  12639055 tcacacttattaagaaaactaacatttagttatttgaggtataattttttgtgttctccttggaataaattttatggaaagatgtaaaaataattctcat 12638956  T
Q  140 tgg 142  Q
    |||    
T  12638955 tgg 12638953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 40 - 142
Target Start/End: Original strand, 16286076 - 16286178
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||| ||| || ||   |||||  |||||||||||| |||| ||||||||| |||||| ||   |||||||||||| |||| ||||    
T  16286076 tcacacttattaagaaaattaacacttagtgatttgaggtataattttttgtgttctctttggaataagtttcatgaaaagatgtaaaaataattctcat 16286175  T
Q  140 tgg 142  Q
    |||    
T  16286176 tgg 16286178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 40 - 142
Target Start/End: Original strand, 31316794 - 31316896
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||| |||||||||||||||| || ||   |||||  |||||||||||| |||| || |||||| |||||| || | |||||||||||| |||| ||||    
T  31316794 tcacagttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattctcat 31316893  T
Q  140 tgg 142  Q
    |||    
T  31316894 tgg 31316896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 142
Target Start/End: Original strand, 1144493 - 1144586
Alignment:
Q  49 ttaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 142  Q
    |||||||||||||| ||||  | |||| |  ||| |||||| |||| |||||  || || ||||||||||| ||||||||||||||||||||||    
T  1144493 ttaagaaaactaaaccatagtagtttgtaacatagttttttgtgttatctttaaaataaattttataggaatatgtaaaaacaattttcattgg 1144586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 142
Target Start/End: Original strand, 3463853 - 3463910
Alignment:
Q  85 tttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 142  Q
    ||||| |||| |||||| || ||||||||||||||||| ||||||||||||| |||||    
T  3463853 tttttgtgttatctttgaaataagttttataggaagatataaaaacaatttttattgg 3463910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 155
Target Start/End: Complemental strand, 8144098 - 8143985
Alignment:
Q  42 acacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattg 141  Q
    |||||||||||||||| |||||||||  ||||||  |||||| ||||| | ||||  |||||| |||||| |||| |||| ||||||  |||| ||||||    
T  8144098 acacttattaagaaaaataaaacatattaatttgaggtataaatttttgtatttttcttggaataagtttcatagaaagaagtaaaacgaattctcattg 8143999  T
Q  142 gctattggttatgg 155  Q
    | || || ||||||    
T  8143998 gttaatgattatgg 8143985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 9957547 - 9957584
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  9957547 ttgaatgtaatttgcatttaattttatgagaataaaca 9957584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 11262015 - 11262052
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  11262015 ttgaatgtaatttgcatttaattttatgagaataaaca 11262052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 12730111 - 12730148
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  12730111 ttgaatgtaatttgcatttaattttatgagaataaaca 12730148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 12792932 - 12792969
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  12792932 ttgaatgtaatttgcatttaattttatgagaataaaca 12792969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 142
Target Start/End: Original strand, 29307185 - 29307282
Alignment:
Q  45 cttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 142  Q
    ||||||||||||||||||| |||  | |||| |   || |||||| |||  |||||  || |||||||||||||||||||||||| ||||||||||||    
T  29307185 cttattaagaaaactaaaatatagtagtttgtaacgtagttttttgtgtaatctttaaaataagttttataggaagatgtaaaaataattttcattgg 29307282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 32017734 - 32017697
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  32017734 ttgaatgtaatttgcatttaattttatgagaataaaca 32017697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 37562893 - 37562930
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  37562893 ttgaatgtaatttgcatttaattttatgagaataaaca 37562930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 38130247 - 38130284
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  38130247 ttgaatgtaatctacatttaattttatgagaataaaca 38130284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 6686414 - 6686380
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataa 212  Q
    ||||||||||||| |||||||||||||||||||||    
T  6686414 ttgaatgtaatttgcatttaattttatgagaataa 6686380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Complemental strand, 32111029 - 32110995
Alignment:
Q  181 aatgtaatttacatttaattttatgagaataaaca 215  Q
    |||||||||| ||||||||||||||||||||||||    
T  32111029 aatgtaatttgcatttaattttatgagaataaaca 32110995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 142
Target Start/End: Original strand, 35462712 - 35462813
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| || |||  |||||  |||||||||||| | || || |||| | |||||| || | |||||||||||| |||| ||||    
T  35462712 tcacacttattaagaaaactaacacttaatgatttgaggtataattttttgttttctccttgg-ataagtttcatggaaagatgtaaaaataattctcat 35462810  T
Q  140 tgg 142  Q
    |||    
T  35462811 tgg 35462813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 142
Target Start/End: Original strand, 37066216 - 37066318
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| || |||  |||||  |||||||||||| | || |  |||||| ||||||  | | |||||||||||| |||| ||||    
T  37066216 tcacacttattaagaaaactaacacttaatgatttgaggtataattttttgtattcttcttggaataagtttcgtggaaagatgtaaaaataattctcat 37066315  T
Q  140 tgg 142  Q
    |||    
T  37066316 tgg 37066318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 43590093 - 43590127
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataa 212  Q
    ||||||||||||| |||||||||||||||||||||    
T  43590093 ttgaatgtaatttgcatttaattttatgagaataa 43590127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 8225493 - 8225456
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  8225493 ttgaacgtaatttgcatttaattttatgagaataaaca 8225456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 20644044 - 20644007
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| |||||||||| |||||||||||||    
T  20644044 ttgaatgtaatttgcatttaatttcatgagaataaaca 20644007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 23233429 - 23233392
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| |||||| |||||||||||||||||    
T  23233429 ttgaatgtaatttgcatttatttttatgagaataaaca 23233392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 34425361 - 34425324
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    |||||| |||||| ||||||||||||||||||||||||    
T  34425361 ttgaatataatttgcatttaattttatgagaataaaca 34425324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 38280877 - 38280840
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    |||||| |||||| ||||||||||||||||||||||||    
T  38280877 ttgaatataatttgcatttaattttatgagaataaaca 38280840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 42273679 - 42273642
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||| ||||| ||||||||||||||||||||||||    
T  42273679 ttgaatgcaatttgcatttaattttatgagaataaaca 42273642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 43454454 - 43454491
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  43454454 ttgaatgtaatttacatttaattctatgagattaaaca 43454491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 108; Significance: 2e-54; HSPs: 89)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 20281757 - 20281642
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  20281757 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 20281658  T
Q  140 tggctattggttatgg 155  Q
    ||||||||||||||||    
T  20281657 tggctattggttatgg 20281642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 47868045 - 47867930
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  47868045 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 47867946  T
Q  140 tggctattggttatgg 155  Q
    ||||||||||||||||    
T  47867945 tggctattggttatgg 47867930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 2229413 - 2229298
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||    
T  2229413 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaatttttat 2229314  T
Q  140 tggctattggttatgg 155  Q
    ||||||||||||||||    
T  2229313 tggctattggttatgg 2229298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 4058881 - 4058766
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  4058881 tcacatttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 4058782  T
Q  140 tggctattggttatgg 155  Q
    ||| ||||||||||||    
T  4058781 tggttattggttatgg 4058766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 7654783 - 7654668
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  7654783 tcacacttattaagaaaactaaaacataaaaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatataaaaacaattttcat 7654684  T
Q  140 tggctattggttatgg 155  Q
    ||||||||| ||||||    
T  7654683 tggctattgattatgg 7654668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 26916491 - 26916376
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||    
T  26916491 tcacacttattaagaaaactaaaacataagaatttggagtatggttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaatttttat 26916392  T
Q  140 tggctattggttatgg 155  Q
    ||||||||||||||||    
T  26916391 tggctattggttatgg 26916376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 29203672 - 29203557
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||   |||||||||||||||||||||||||||||||    
T  29203672 tcacacttattaagaaaactaaaacataagaatttggagtataattttttgtgttttctttgcaaatttttttataggaagatgtaaaaacaattttcat 29203573  T
Q  140 tggctattggttatgg 155  Q
    ||||||||||||||||    
T  29203572 tggctattggttatgg 29203557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 40 - 153
Target Start/End: Complemental strand, 39078322 - 39078210
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  39078322 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttata-gaagatgtaaaaacaattttcat 39078224  T
Q  140 tggctattggttat 153  Q
    |||||||| |||||    
T  39078223 tggctattagttat 39078210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 55580836 - 55580721
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||| |||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  55580836 tcacatttattaagaaaactgaaacataagaatttggagtatagttttttttgttttctttggaaaaagttgtataggaagatgtaaaaacaattttcat 55580737  T
Q  140 tggctattggttatgg 155  Q
    |||||||| |||||||    
T  55580736 tggctattagttatgg 55580721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 40 - 154
Target Start/End: Complemental strand, 14332926 - 14332812
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||||||||||||||||||| |||  |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||    
T  14332926 tcacacttattaagaaaactaaaacataagaatttggaatatggttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaatttttat 14332827  T
Q  140 tggctattggttatg 154  Q
    |||| ||||||||||    
T  14332826 tggccattggttatg 14332812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 40 - 154
Target Start/End: Original strand, 41414597 - 41414711
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||    
T  41414597 tcacacttattaagaaaactaaaacataagaatatggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaatttttat 41414696  T
Q  140 tggctattggttatg 154  Q
    ||||||||| |||||    
T  41414697 tggctattgattatg 41414711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 20716346 - 20716231
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||   |||| ||||||||||||||||||| ||||||||||||||||||||||    
T  20716346 tcacacttattaagaaaactaaaacataagaatttggagtatagtcttttgacttttgtttggaaaaagttttatagaaagatgtaaaaacaattttcat 20716247  T
Q  140 tggctattggttatgg 155  Q
    ||||||||||||||||    
T  20716246 tggctattggttatgg 20716231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 45 - 155
Target Start/End: Original strand, 16604837 - 16604947
Alignment:
Q  45 cttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggct 144  Q
    |||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  16604837 cttattaagaaaactaaaacataagaatttagagtatagttttttgtgttttctttgaaaaaagttttataggaagatgttaaaacaattttcattggct 16604936  T
Q  145 attggttatgg 155  Q
    ||| |||||||    
T  16604937 attagttatgg 16604947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 10069863 - 10069748
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||| |||||||||||||||||||||| |||||| |||||| | ||||||| | |||||||||||||| ||||||||||||||||||||||    
T  10069863 tcacacttattaataaaactaaaacataagaatttgtagtatagttttttgtattttcttcgaaaaaagttttatagaaagatgtaaaaacaattttcat 10069764  T
Q  140 tggctattggttatgg 155  Q
    ||||||||||||||||    
T  10069763 tggctattggttatgg 10069748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 24940531 - 24940416
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||| ||||||||||||||||||| ||||||||||||||||| |||||| | ||||||||||||||||||||||| ||||||||||||||||||||| |    
T  24940531 tcacatttattaagaaaactaaaacgtaagaatttggagtatagttttttgtattttctttggaaaaagttttataagaagatgtaaaaacaattttcgt 24940432  T
Q  140 tggctattggttatgg 155  Q
    ||| ||||||||||||    
T  24940431 tggttattggttatgg 24940416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 42 - 155
Target Start/End: Original strand, 56318058 - 56318171
Alignment:
Q  42 acacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattg 141  Q
    ||||||||||| |||| |||||||||||||||| ||||||  |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||     
T  56318058 acacttattaaaaaaattaaaacataagaatttagagtatggttttttgtgttttctttggaaaaaggtttataggaagatgtaaaaacaattttcatta 56318157  T
Q  142 gctattggttatgg 155  Q
    ||||||||||||||    
T  56318158 gctattggttatgg 56318171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 5483264 - 5483379
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||| |||||||||||||||||||| |||||| ||||||||||||| ||||||||||  || |||||| |||||||||||||||||||||||||||    
T  5483264 tcacacttgttaagaaaactaaaacataaaaatttgaagtataattttttgtgttttctttaaaataagtttaataggaagatgtaaaaacaattttcat 5483363  T
Q  140 tggctattggttatgg 155  Q
    |||||| |||||||||    
T  5483364 tggctactggttatgg 5483379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 40 - 154
Target Start/End: Original strand, 28668987 - 28669101
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||||||||||||||||  |||||| |||||| |||||||||| ||||| |||||||||||| |||||||||||||||||||    
T  28668987 tcacacttattaagaaaactaaaacataagaatttaaagtatagttttttgtgttttctttagaaaaggttttataggaaaatgtaaaaacaattttcat 28669086  T
Q  140 tggctattggttatg 154  Q
    ||| |||| ||||||    
T  28669087 tggttattagttatg 28669101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 17794527 - 17794642
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||||| | ||||||||| |||||| ||||||  |||||||||| || || |||||||||||||||||||||||||||||||    
T  17794527 tcacacttattaagaaaactaaaaaaaaagaatttgaagtatagttttttgcgttttctttgaaataaattttataggaagatgtaaaaacaattttcat 17794626  T
Q  140 tggctattggttatgg 155  Q
    ||||||||| ||||||    
T  17794627 tggctattgattatgg 17794642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 46 - 155
Target Start/End: Original strand, 35310734 - 35310843
Alignment:
Q  46 ttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggcta 145  Q
    |||||||||||||||||||||||||||||| || ||| |||||| |||||||||| ||| |||||| || | ||||||||||||||||||||||||||||    
T  35310734 ttattaagaaaactaaaacataagaatttgtagcatagttttttgtgttttctttagaataagtttcatggaaagatgtaaaaacaattttcattggcta 35310833  T
Q  146 ttggttatgg 155  Q
    ||||||||||    
T  35310834 ttggttatgg 35310843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 40 - 148
Target Start/End: Original strand, 21722668 - 21722776
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||| |||||||||||||||||||||  |||||| | |||||||||||||||| || |||||||||||||||||||||||| |||||||||    
T  21722668 tcacacttattaataaaactaaaacataagaattttaagtatagtgttttatgttttctttgtaataagttttataggaagatgtaaaaataattttcat 21722767  T
Q  140 tggctattg 148  Q
    || ||||||    
T  21722768 tgactattg 21722776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 41 - 155
Target Start/End: Complemental strand, 42915695 - 42915581
Alignment:
Q  41 cacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcatt 140  Q
    |||||||||||| |||||||||| ||||||||||| || ||| |||||| |||||||||||||| |||||| || | |||||||||||||||||||||||    
T  42915695 cacacttattaaaaaaactaaaatataagaatttgtagcatagttttttgtgttttctttggaataagtttcatggaaagatgtaaaaacaattttcatt 42915596  T
Q  141 ggctattggttatgg 155  Q
    ||| |||||||||||    
T  42915595 ggcaattggttatgg 42915581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 42 - 126
Target Start/End: Complemental strand, 16473912 - 16473828
Alignment:
Q  42 acacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaa 126  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||    
T  16473912 acacttattaagaaaactaaaatataagaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaa 16473828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 40 - 154
Target Start/End: Original strand, 48793616 - 48793728
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||||||| |||||||||||| || ||| |||| |  ||||||||||||| |||||| || ||||||||||||||||||||||||    
T  48793616 tcacacttattaagaaaactaaagcataagaatttgtagcatagttttgt--gttttctttggaataagtttcatgggaagatgtaaaaacaattttcat 48793713  T
Q  140 tggctattggttatg 154  Q
    |||| ||||||||||    
T  48793714 tggcaattggttatg 48793728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 8683292 - 8683407
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||| ||||||||| |||||||||||| || ||| |||||| |||||||||||||| |||||| || | || ||||||||| |||||||||    
T  8683292 tcacacttattaaaaaaactaaagcataagaatttgtagcatagttttttgtgttttctttggaataagtttcatggaaatatgtaaaaataattttcat 8683391  T
Q  140 tggctattggttatgg 155  Q
    |||| |||||||||||    
T  8683392 tggcaattggttatgg 8683407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 40 - 140
Target Start/End: Original strand, 5064641 - 5064741
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||||||||||||  |||||| |  |||||||||| |||| |||||| || |||||||| |||||||||||||||||||||||||    
T  5064641 tcacacttattaagaaaactaaaacatagtaatttgtaacataattttttgtgttatctttgaaataagttttaaaggaagatgtaaaaacaattttcat 5064740  T
Q  140 t 140  Q
    |    
T  5064741 t 5064741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 1585335 - 1585448
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||| ||||||||| |||||||||||| ||||||||||||  |||| ||||||||||| || |||||| || | ||||||| ||||||||||| ||    
T  1585335 tcacacttgttaagaaaagtaaaacataagattttggagtataa--ttttgtgttttctttgaaataagtttcatggaaagatgttaaaacaatttttat 1585432  T
Q  140 tggctattggttatgg 155  Q
    ||||||||| ||||||    
T  1585433 tggctattgattatgg 1585448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 12002619 - 12002741
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatg-------ttttctttggaaaaagttttataggaagatgtaaaaacaa 132  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||       |||| |||||||  ||||| || | |||||||||||||||    
T  12002619 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtttttttttttttttggaattagtttcatggaaagatgtaaaaacaa 12002718  T
Q  133 ttttcattggctattggttatgg 155  Q
    |||| |||||| |||||||||||    
T  12002719 tttttattggccattggttatgg 12002741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 32203379 - 32203277
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||| ||||| |||||||||||||||||||||  |||||| |||||| |  |||||||| || ||||||||| ||||||| ||||||||||||||||    
T  32203379 tcacactaattaaaaaaactaaaacataagaatttaaagtatagttttttgttgtttctttgaaataagttttatgggaagatataaaaacaattttcat 32203280  T
Q  140 tgg 142  Q
    |||    
T  32203279 tgg 32203277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 46 - 155
Target Start/End: Original strand, 17799126 - 17799235
Alignment:
Q  46 ttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggcta 145  Q
    |||||||||||||||||| || | ||||||||||||||||| |  |||| |  ||||||  |||||||| ||||||||||||||||||||||||||| ||    
T  17799126 ttattaagaaaactaaaatatgataatttggagtataatttctggtgttcttcttggaattagttttatgggaagatgtaaaaacaattttcattggtta 17799225  T
Q  146 ttggttatgg 155  Q
    || |||||||    
T  17799226 tttgttatgg 17799235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 40 - 100
Target Start/End: Original strand, 50080442 - 50080502
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttcttt 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  50080442 tcacacttattaagaaaactaaaacataagaattttgagtataattttttgtgttttcttt 50080502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 40 - 142
Target Start/End: Original strand, 28142608 - 28142710
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||||| || | | |||| |  |||||||||| |||| |||||  || ||||||||||||| ||||||||||||||||||||    
T  28142608 tcacacttattaagaaaactaaaatatgatagtttgtaacataattttttgtgttatctttaaaataagttttataggaggatgtaaaaacaattttcat 28142707  T
Q  140 tgg 142  Q
    |||    
T  28142708 tgg 28142710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 40 - 154
Target Start/End: Complemental strand, 19352018 - 19351899
Alignment:
Q  40 tcacacttattaagaaaactaaaacat-aagaatttggagtataattttt---tatgttttctttggaaaaagttttataggaagatg-taaaaacaatt 134  Q
    ||||||||||||||||||||||||||| || || |||||||||| |||||   | ||||||| ||| || |||||| || |||||||| |||||||||||    
T  19352018 tcacacttattaagaaaactaaaacataaaaaaattggagtatagtttttttgtgtgttttcattgaaataagtttcatgggaagatgttaaaaacaatt 19351919  T
Q  135 ttcattggctattggttatg 154  Q
    ||||||||||||| ||||||    
T  19351918 ttcattggctattagttatg 19351899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 60 - 155
Target Start/End: Original strand, 32280009 - 32280104
Alignment:
Q  60 aaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 155  Q
    |||||||||||||||||||||||||||||| |||||||||| ||| | |||| ||    | |||||||||||||||| ||||||||||| ||||||    
T  32280009 aaaacataagaatttggagtataattttttgtgttttctttagaataggtttgatgaagatatgtaaaaacaattttaattggctattgattatgg 32280104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 40 - 141
Target Start/End: Complemental strand, 32410494 - 32410393
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||||| ||||||  | |||  | || | |||||| |||| |||||| || |||||||||||||||||||||||| |||||||||    
T  32410494 tcacacttattaagaaaactacaacatagtagtttataataaagttttttgtgttatctttgaaataagttttataggaagatgtaaaaataattttcat 32410395  T
Q  140 tg 141  Q
    ||    
T  32410394 tg 32410393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 153
Target Start/End: Original strand, 46070517 - 46070621
Alignment:
Q  48 attaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctatt 147  Q
    ||||||||||||||||||||  | |||| |  ||| |||||  |||| |||||| || ||||||||||||||||||||||||||||||||||||| | ||    
T  46070517 attaagaaaactaaaacatagtagtttgtaacatagtttttg-tgttgtctttgaaataagttttataggaagatgtaaaaacaattttcattggttgtt 46070615  T
Q  148 ggttat 153  Q
    ||||||    
T  46070616 ggttat 46070621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 53 - 153
Target Start/End: Original strand, 47516190 - 47516290
Alignment:
Q  53 gaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggtta 152  Q
    ||||| |||||||||  | |||| | |||| |||||| |||| |||||| || |||||||||||||||| |||||||||||||||||||| | |||||||    
T  47516190 gaaaagtaaaacatagtagtttgtaatatagttttttgtgttatctttgaaataagttttataggaagaagtaaaaacaattttcattggttgttggtta 47516289  T
Q  153 t 153  Q
    |    
T  47516290 t 47516290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 76 - 148
Target Start/End: Complemental strand, 50145865 - 50145794
Alignment:
Q  76 gagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattg 148  Q
    |||||||||| ||| ||||| |||||||| ||||||||| |||||||||||| ||||||||||||||||||||    
T  50145865 gagtataattgtttgtgttt-ctttggaataagttttatgggaagatgtaaacacaattttcattggctattg 50145794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 142
Target Start/End: Original strand, 29180371 - 29180473
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| || ||   |||||  |||||||||||| |||| || |||||| |||||| |||| |||||||||||| |||| ||||    
T  29180371 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatagaaagatgtaaaaataattctcat 29180470  T
Q  140 tgg 142  Q
    |||    
T  29180471 tgg 29180473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 80 - 142
Target Start/End: Complemental strand, 49080383 - 49080321
Alignment:
Q  80 ataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 142  Q
    |||||||||| | || |||||| || |||||||||||||||||||||||||||||||||||||    
T  49080383 ataattttttgtcttatctttgaaataagttttataggaagatgtaaaaacaattttcattgg 49080321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 42 - 153
Target Start/End: Original strand, 52535585 - 52535684
Alignment:
Q  42 acacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattg 141  Q
    ||||||||||||||||||||| |||||||||||||||||||         ||||||||| |||||| |||||||  ||   ||||||| |||||||||||    
T  52535585 acacttattaagaaaactaaagcataagaatttggagtata---------gttttctttagaaaaatttttatataaa---gtaaaaataattttcattg 52535672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 141
Target Start/End: Original strand, 32323257 - 32323349
Alignment:
Q  49 ttaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattg 141  Q
    ||||||||| |||||  ||| |||||| |||||  |||||| ||||||||||  || ||| ||||| ||||||||||||||||||||||||||    
T  32323257 ttaagaaaattaaaatttaaaaatttgaagtattgttttttgtgttttctttaaaataagatttatgggaagatgtaaaaacaattttcattg 32323349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 66 - 148
Target Start/End: Complemental strand, 31280329 - 31280253
Alignment:
Q  66 taagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattg 148  Q
    ||||||||| ||||||| |||||| |||||||||||||| |||||||||      ||||||||| ||||||||||||||||||    
T  31280329 taagaatttagagtatagttttttgtgttttctttggaataagttttat------atgtaaaaataattttcattggctattg 31280253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 77 - 155
Target Start/End: Complemental strand, 5815598 - 5815520
Alignment:
Q  77 agtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 155  Q
    |||||| |||||| ||||||||||| || |||||||||  ||||||||||||| |||||| |||| |||||| ||||||    
T  5815598 agtatagttttttgtgttttctttgaaataagttttatgagaagatgtaaaaataatttttattgactattgattatgg 5815520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 109 - 155
Target Start/End: Original strand, 17186850 - 17186896
Alignment:
Q  109 ttttataggaagatgtaaaaacaattttcattggctattggttatgg 155  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||    
T  17186850 ttttataggaagatgtaaaaataagtttcattggctattggttatgg 17186896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 29899876 - 29899774
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||| |||||||||||||||| || ||   |||||  |||||||||||| |||| || |||||| ||||||||| | |||||||||||| |||| ||||    
T  29899876 tcacatttattaagaaaactaacacgtagtgatttgaggtataattttttgtgttctccttggaataagttttatggaaagatgtaaaaataattctcat 29899777  T
Q  140 tgg 142  Q
    |||    
T  29899776 tgg 29899774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 142
Target Start/End: Original strand, 30011913 - 30012015
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||  ||||| ||   ||||||  |||||||||||| |||| | ||||||| |||||| || | ||||||||||||||||| ||||    
T  30011913 tcacacttattaagaaagttaaaatattgtaatttgaggtataattttttgtgttatttttggaataagtttcatggaaagatgtaaaaacaattatcat 30012012  T
Q  140 tgg 142  Q
    |||    
T  30012013 tgg 30012015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 142
Target Start/End: Original strand, 30776443 - 30776545
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| || ||   |||||  |||||||||||| |||| || |||||| |||||| || | |||||||||||| |||| ||||    
T  30776443 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattctcat 30776542  T
Q  140 tgg 142  Q
    |||    
T  30776543 tgg 30776545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 37788612 - 37788510
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| || ||   |||||  |||||||||||| |||| || |||||| |||||| || | |||||||||||| |||| ||||    
T  37788612 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattctcat 37788513  T
Q  140 tgg 142  Q
    |||    
T  37788512 tgg 37788510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 142
Target Start/End: Original strand, 39969948 - 39970050
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| || ||   |||||  |||||||||||| |||| || |||||| |||||| || | |||||||||||| |||| ||||    
T  39969948 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattctcat 39970047  T
Q  140 tgg 142  Q
    |||    
T  39970048 tgg 39970050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 49902188 - 49902086
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| || ||   ||||| |||||||||||||||||| |  |||||| |||||| ||   |||||||||||| |||| ||||    
T  49902188 tcacacttattaagaaaactaacacttagtgatttgaagtataattttttatgttctagttggaataagtttcatgaaaagatgtaaaaataattctcat 49902089  T
Q  140 tgg 142  Q
    |||    
T  49902088 tgg 49902086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 50768606 - 50768504
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| || ||   ||| |   ||||||||||| ||||||| |||||| |||||| || | |||||||||||| |||||||||    
T  50768606 tcacacttattaagaaaactaatacttagtgattcgagatataattttttgtgttttccttggaataagtttcatggaaagatgtaaaaataattttcat 50768507  T
Q  140 tgg 142  Q
    |||    
T  50768506 tgg 50768504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 142
Target Start/End: Original strand, 53677438 - 53677540
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| || ||   |||||  |||||||||||| |||| || ||||||  ||||| |||| |||||||||||| |||| ||||    
T  53677438 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaatgagtttcatagaaagatgtaaaaataattctcat 53677537  T
Q  140 tgg 142  Q
    |||    
T  53677538 tgg 53677540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 17794665 - 17794702
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||||||||||||||||||||||||||||    
T  17794665 ttgaatgtaatttacatttaattttatgagaataaaca 17794702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 142
Target Start/End: Original strand, 28318408 - 28318505
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||| ||||||||||||||    |||| |  ||| |||||| |||| |||||| || ||  ||||||||||||||||||||||||||||||    
T  28318408 tcacacttattaacaaaactaaaacatag---tttgtaacatagttttttgtgttatctttgaaataa--tttataggaagatgtaaaaacaattttcat 28318502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 141
Target Start/End: Complemental strand, 29511547 - 29511490
Alignment:
Q  84 ttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattg 141  Q
    |||||| |||| |||||  || ||||||||||||||||||||||||||||||||||||    
T  29511547 ttttttgtgttatctttaaaataagttttataggaagatgtaaaaacaattttcattg 29511490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 141
Target Start/End: Complemental strand, 38941030 - 38940929
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| || |||  |||||  |||||||||||| |||| || |||||| |||||| ||   |||||||||||| |||| ||||    
T  38941030 tcacacttattaagaaaactaacacttaatgatttgaggtataattttttgtgttctccttggaataagtttcattaaaagatgtaaaaataattctcat 38940931  T
Q  140 tg 141  Q
    ||    
T  38940930 tg 38940929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 109 - 153
Target Start/End: Original strand, 5841834 - 5841878
Alignment:
Q  109 ttttataggaagatgtaaaaacaattttcattggctattggttat 153  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||    
T  5841834 ttttataggaagatgtaaaaataattttcattggttattggttat 5841878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 148
Target Start/End: Complemental strand, 53848626 - 53848518
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||| ||||||||  | |||| |  ||| ||| || |||| || ||| || || ||||||||||||| |||||||||||||| ||    
T  53848626 tcacacttattaagaaaacaaaaacatagtagtttgcaacatagtttcttgtgttatccttgaaataatttttataggaagacgtaaaaacaattttaat 53848527  T
Q  140 tggctattg 148  Q
    ||| |||||    
T  53848526 tggttattg 53848518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 147
Target Start/End: Original strand, 8013075 - 8013182
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||| ||||||||||||||||||||||  | |||| |  ||| ||| || |||| || ||| || |||||| |||| ||||||||||||||||||| ||    
T  8013075 tcacatttattaagaaaactaaaacatagtagtttgtaacatagtttcttgtgttatccttgaaataagtttcatagaaagatgtaaaaacaatttttat 8013174  T
Q  140 tggctatt 147  Q
    ||| ||||    
T  8013175 tggttatt 8013182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 25297206 - 25297323
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttcttt----ggaaaaagttttataggaagatgtaaaaacaattt 135  Q
    |||||||||||||||||| ||| |||||   |||| |||| || |||||| |||||| |||    | || |||||| || | ||||||||||||||||||    
T  25297206 tcacacttattaagaaaagtaatacatac--atttagagtctagttttttgtgttttttttttttgtaataagtttcatggaaagatgtaaaaacaattt 25297303  T
Q  136 tcattggctattggttatgg 155  Q
    ||||||||||||| ||||||    
T  25297304 tcattggctattgattatgg 25297323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 97
Target Start/End: Original strand, 31532445 - 31532496
Alignment:
Q  46 ttattaagaaaactaaaacataagaatttggagtataattttttatgttttc 97  Q
    ||||||||||||||||||||| | ||||| ||||||| ||||||||||||||    
T  31532445 ttattaagaaaactaaaacattacaatttagagtatagttttttatgttttc 31532496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 46 - 88
Target Start/End: Complemental strand, 7438808 - 7438766
Alignment:
Q  46 ttattaagaaaactaaaacataagaatttggagtataattttt 88  Q
    ||||||||||||||||||||||| ||||||||||||| |||||    
T  7438808 ttattaagaaaactaaaacataataatttggagtatagttttt 7438766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 91 - 153
Target Start/End: Original strand, 8178276 - 8178338
Alignment:
Q  91 tgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttat 153  Q
    |||| |||||| || |||||||||| |||||||||||||||||||  ||||| ||||||||||    
T  8178276 tgttatctttgaaataagttttataagaagatgtaaaaacaatttgtattggttattggttat 8178338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 40 - 142
Target Start/End: Original strand, 10591462 - 10591564
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| |  ||   |||||  |||||||||||| |||| || |||||| |||||| || | |||||||||||| |||| ||||    
T  10591462 tcacacttattaagaaaactaacatttagtgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattctcat 10591561  T
Q  140 tgg 142  Q
    |||    
T  10591562 tgg 10591564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 108 - 142
Target Start/End: Original strand, 23978169 - 23978203
Alignment:
Q  108 gttttataggaagatgtaaaaacaattttcattgg 142  Q
    |||||||||||||||||||||||||||||||||||    
T  23978169 gttttataggaagatgtaaaaacaattttcattgg 23978203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 37912050 - 37911948
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||||| | |  | |||  |  ||| |||||| |||| |||||  || ||||||||||| || |||||||||||||||||||    
T  37912050 tcacacttattaagaaaactaaaatacagtagtttataacatagttttttgtgttatctttaaaataagttttatagaaatatgtaaaaacaattttcat 37911951  T
Q  140 tgg 142  Q
    |||    
T  37911950 tgg 37911948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 1585471 - 1585508
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  1585471 ttgaatgtaattttcatttaattttatgagaataaaca 1585508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 14332788 - 14332751
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  14332788 ttgaatgtaatttgcatttaattttatgagaataaaca 14332751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 20281619 - 20281582
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  20281619 ttgaatgtaatttgcatttaattttatgagaataaaca 20281582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 20716208 - 20716171
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  20716208 ttgaatgtaatttgcatttaattttatgagaataaaca 20716171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 26916353 - 26916316
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  26916353 ttgaatgtaatttgcatttaattttatgagaataaaca 26916316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 29203534 - 29203497
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  29203534 ttgaatgtaatttgcatttaattttatgagaataaaca 29203497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 155
Target Start/End: Complemental strand, 35529760 - 35529723
Alignment:
Q  118 aagatgtaaaaacaattttcattggctattggttatgg 155  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  35529760 aagatgtaaaaacaattttcattgggtattggttatgg 35529723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 56318194 - 56318231
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  56318194 ttgaatgtaatttacatttaattttatgataataaaca 56318231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 134
Target Start/End: Original strand, 5222252 - 5222346
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaatt 134  Q
    |||||||||||||||||||||| |||||  ||||||   ||||||||||| |||| |  ||| || |||||| |||  || ||||||||||||||    
T  5222252 tcacacttattaagaaaactaatacatagtaatttgagttataattttttgtgttcttcttgaaataagtttcataaaaaaatgtaaaaacaatt 5222346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 25297346 - 25297380
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataa 212  Q
    |||||||||||||||||||||||| ||||||||||    
T  25297346 ttgaatgtaatttacatttaatttcatgagaataa 25297380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 142
Target Start/End: Original strand, 32012286 - 32012388
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| || |||  |||||  |||||||||||| |||| || ||  |  |||||| || | |||||||||||| |||| ||||    
T  32012286 tcacacttattaagaaaactaacacttaatgatttgaggtataattttttgtgttctccttaaattaagtttcatggaaagatgtaaaaataattctcat 32012385  T
Q  140 tgg 142  Q
    |||    
T  32012386 tgg 32012388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 142
Target Start/End: Complemental strand, 40411199 - 40411165
Alignment:
Q  108 gttttataggaagatgtaaaaacaattttcattgg 142  Q
    ||||||||||||||||||||||||||||| |||||    
T  40411199 gttttataggaagatgtaaaaacaatttttattgg 40411165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 134
Target Start/End: Complemental strand, 47807356 - 47807262
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaatt 134  Q
    |||||||||||||||||| |||  | ||   |||||  |||||||||||| |||| ||||||||| |||||| || | |||||||||||| ||||    
T  47807356 tcacacttattaagaaaattaatccttagtgatttgaggtataattttttgtgttctctttggaataagtttcatggaaagatgtaaaaataatt 47807262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 47867907 - 47867873
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataa 212  Q
    ||||||||||||| |||||||||||||||||||||    
T  47867907 ttgaatgtaatttgcatttaattttatgagaataa 47867873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Complemental strand, 55580694 - 55580660
Alignment:
Q  181 aatgtaatttacatttaattttatgagaataaaca 215  Q
    |||||||||| ||||||||||||||||||||||||    
T  55580694 aatgtaatttgcatttaattttatgagaataaaca 55580660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 10069725 - 10069688
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    |||||||| |||| ||||||||||||||||||||||||    
T  10069725 ttgaatgttatttgcatttaattttatgagaataaaca 10069688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 28669124 - 28669161
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    |||||||||||||  |||||||||||||||||||||||    
T  28669124 ttgaatgtaatttgtatttaattttatgagaataaaca 28669161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 39078185 - 39078148
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||| | ||||||||||||||||||||||||    
T  39078185 ttgaatgtaatgtgcatttaattttatgagaataaaca 39078148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 106 - 155
Target Start/End: Complemental strand, 40553869 - 40553820
Alignment:
Q  106 aagttttataggaagatgtaaaaacaattttcattggctattggttatgg 155  Q
    |||||| |||| ||||||||||||||| ||||||||| |||| |||||||    
T  40553869 aagtttcatagaaagatgtaaaaacaagtttcattggttattagttatgg 40553820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 41414734 - 41414771
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| ||||||||||||| ||||||||||    
T  41414734 ttgaatgtaatttgcatttaattttataagaataaaca 41414771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 52535709 - 52535746
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    |||||| |||||| ||||||||||||||||||||||||    
T  52535709 ttgaatataatttgcatttaattttatgagaataaaca 52535746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 72
Target Start/End: Complemental strand, 32203445 - 32203413
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaat 72  Q
    ||||||||||||| |||||||||||||||||||    
T  32203445 tcacacttattaaaaaaactaaaacataagaat 32203413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 108; Significance: 2e-54; HSPs: 72)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 19264268 - 19264153
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19264268 tcacacttattaagaaaactaaaacataagaatttagagtataattttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 19264169  T
Q  140 tggctattggttatgg 155  Q
    ||||||||||||||||    
T  19264168 tggctattggttatgg 19264153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 6110191 - 6110306
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  6110191 tcacacttattaagaaaactaaaacataagaatttggagtatagctttttgtgttttcttcggaaaaagttttataggaagatgtaaaaacaattttcat 6110290  T
Q  140 tggctattggttatgg 155  Q
    ||||||||||||||||    
T  6110291 tggctattggttatgg 6110306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 42 - 155
Target Start/End: Original strand, 28599142 - 28599255
Alignment:
Q  42 acacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattg 141  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  28599142 acacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagatttataggaagatgtaaaaataattttcattg 28599241  T
Q  142 gctattggttatgg 155  Q
    ||||||||||||||    
T  28599242 gctattggttatgg 28599255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 3201494 - 3201379
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||||||||||||||||  |||||| |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  3201494 tcacacttattaagaaaactaaaacataagaatttaaagtatagttttttgtgttttctttggaaaaagttttatagaaagatgtaaaaacaattttcat 3201395  T
Q  140 tggctattggttatgg 155  Q
    ||||||||||||||||    
T  3201394 tggctattggttatgg 3201379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 35517291 - 35517176
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||  ||||||||||| |||||||||    
T  35517291 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttatagtgagatgtaaaaataattttcat 35517192  T
Q  140 tggctattggttatgg 155  Q
    ||||||||||||||||    
T  35517191 tggctattggttatgg 35517176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 40 - 153
Target Start/End: Complemental strand, 11617192 - 11617079
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||  | ||||||||| |||||||||||||||||||||||||||||||||||||    
T  11617192 tcacacttattaagaaaattaaaacataagaatttggagtatagtttttggtattttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 11617093  T
Q  140 tggctattggttat 153  Q
    ||||||||||||||    
T  11617092 tggctattggttat 11617079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 45660536 - 45660418
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaat---ttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaatttt 136  Q
    ||||| |||||||||||||||||||||||||||   |||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  45660536 tcacatttattaagaaaactaaaacataagaataatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaatttt 45660437  T
Q  137 cattggctattggttatgg 155  Q
    |||||||||||||||||||    
T  45660436 cattggctattggttatgg 45660418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 45085425 - 45085310
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||| | ||||||||| |||||||||||||||||||||||||||||||||||||    
T  45085425 tcacacttattaagaaaattaaaacataagaatttggagtatagttttttgtattttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 45085326  T
Q  140 tggctattggttatgg 155  Q
    | || |||||||||||    
T  45085325 tagccattggttatgg 45085310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 8701770 - 8701655
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||| |||||||||||||||||||||||| |||||| || ||| ||||||||||||||||||||| |||||| || ||||||||||||||||||||||||    
T  8701770 tcacgcttattaagaaaactaaaacataaaaatttgtagcatagttttttatgttttctttggaataagtttcatgggaagatgtaaaaacaattttcat 8701671  T
Q  140 tggctattggttatgg 155  Q
    ||||||||||||||||    
T  8701670 tggctattggttatgg 8701655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 12938410 - 12938295
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| || |||||||| || ||||||||||||||  ||||||||||||||||||    
T  12938410 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgctttctttgaaataagttttataggaaagtgtaaaaacaattttcat 12938311  T
Q  140 tggctattggttatgg 155  Q
    ||||||||| ||||||    
T  12938310 tggctattgattatgg 12938295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 40 - 154
Target Start/End: Original strand, 24204521 - 24204635
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||| |||| |||||||||||||| ||||||||||||||||||||| || |||||||||||||| |||||||||||||| |||||||| ||||||||||    
T  24204521 tcacatttatcaagaaaactaaaacctaagaatttggagtataatttattgtgttttctttggaataagttttataggaatatgtaaaatcaattttcat 24204620  T
Q  140 tggctattggttatg 154  Q
    |||||||||||||||    
T  24204621 tggctattggttatg 24204635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 6765925 - 6766040
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||| |||||||||| |||||| |||||| |||||||||||||| |||||| || |||||||||||||||||||||||||||| ||    
T  6765925 tcacacttattaagaaaattaaaacataaaaatttgaagtatagttttttatgttttcattggaataaattttataggaagatgtaaaaacaatttttat 6766024  T
Q  140 tggctattggttatgg 155  Q
    || |||||||||||||    
T  6766025 tgactattggttatgg 6766040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 25572213 - 25572098
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||||||| |||||||||||| || ||| |||||| |||||||||||||| |||||| || ||||||||||||||||||||||||    
T  25572213 tcacacttattaagaaaactaaagcataagaatttgtagcatagttttttgtgttttctttggaataagtttcatgggaagatgtaaaaacaattttcat 25572114  T
Q  140 tggctattggttatgg 155  Q
    ||| ||||||||||||    
T  25572113 tggatattggttatgg 25572098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 29524033 - 29524148
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||| |||||||||| |||||||||||| || |||||||||| |||||||||||||| |||||| || ||||||||||||||||||||||||    
T  29524033 tcacacttattatgaaaactaaagcataagaatttgtagcataattttttgtgttttctttggaataagtttcatgggaagatgtaaaaacaattttcat 29524132  T
Q  140 tggctattggttatgg 155  Q
    |||| |||||||||||    
T  29524133 tggcaattggttatgg 29524148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 40 - 146
Target Start/End: Complemental strand, 35023066 - 35022961
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||  |||||| |||||||||||||||||||||||||||    
T  35023066 tcacacttattaagaaaactaaaacataagaatttggagtataattttttgtgtttt-tttggagtaagtttcataggaagatgtaaaaacaattttcat 35022968  T
Q  140 tggctat 146  Q
    | |||||    
T  35022967 ttgctat 35022961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 40 - 141
Target Start/End: Complemental strand, 43415569 - 43415468
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||| |||||||||||||| ||||||||||| ||||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||    
T  43415569 tcacacttactaagaaaactaaaatataagaatttgaagtataattttttgtgttttctttaaaaaaagttttataggaagatgtaaaaacaattttcat 43415470  T
Q  140 tg 141  Q
    ||    
T  43415469 tg 43415468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 9864710 - 9864826
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtata-attttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttca 138  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||| |||||| || |||||| ||||||||||||||||    
T  9864710 tcacacttattaagaaaactaaaacataagaatttggagtatagtttttttgtgttttctttggaataagtttcatgggaagaggtaaaaacaattttca 9864809  T
Q  139 ttggctattggttatgg 155  Q
    ||||| |||| ||||||    
T  9864810 ttggcaattgattatgg 9864826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 41 - 155
Target Start/End: Original strand, 33198624 - 33198738
Alignment:
Q  41 cacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcatt 140  Q
    ||||||||||||||||||||||| ||||||||||||| | || |||||| ||||||||||  || ||||||||||||||||||||||||||||||| |||    
T  33198624 cacacttattaagaaaactaaaatataagaatttggactctagttttttgtgttttctttaaaagaagttttataggaagatgtaaaaacaattttgatt 33198723  T
Q  141 ggctattggttatgg 155  Q
    || ||||||||||||    
T  33198724 ggttattggttatgg 33198738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 41528425 - 41528309
Alignment:
Q  40 tcacacttattaagaaaactaaaa-cataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttca 138  Q
    |||||||||||||||||| ||||| |||||||||||| |||||| |||||| ||||||||||| ||    ||||||||||||||||||||||||||||||    
T  41528425 tcacacttattaagaaaattaaaaacataagaatttgaagtatagttttttgtgttttctttgaaattttttttataggaagatgtaaaaacaattttca 41528326  T
Q  139 ttggctattggttatgg 155  Q
    |||||||||||||||||    
T  41528325 ttggctattggttatgg 41528309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 40 - 147
Target Start/End: Original strand, 7645219 - 7645326
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| || ||| || ||| || |||| |||||||||||||||||||    
T  7645219 tcacacttattaagaaaactaaaacataagaatttggagtataatattttgtgttttccttagaataaatttcatgggaacatgtaaaaacaattttcat 7645318  T
Q  140 tggctatt 147  Q
    ||||||||    
T  7645319 tggctatt 7645326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 66 - 155
Target Start/End: Complemental strand, 14874105 - 14874016
Alignment:
Q  66 taagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 155  Q
    ||||| ||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  14874105 taagagtttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaataattttcattggctattggttatgg 14874016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 35115795 - 35115911
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatg-ttttctttggaaaaagttttataggaagatgtaaaaacaattttca 138  Q
    ||||||||||||||| ||||||||||||||||||||||||||| |||||| || |||| |||  || ||||||||||| |||||||||||||||||||||    
T  35115795 tcacacttattaagagaactaaaacataagaatttggagtatagttttttgtgtttttttttttaataagttttatagaaagatgtaaaaacaattttca 35115894  T
Q  139 ttggctattggttatgg 155  Q
    || | ||||||||||||    
T  35115895 tttgttattggttatgg 35115911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 40 - 152
Target Start/End: Original strand, 40808712 - 40808823
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||||||| |||||||||||| || ||| |||||| |||||||||||||| |||||| || ||||||||||||||||||||||||    
T  40808712 tcacacttattaagaaaactaaagcataagaatttgtagcatagttttttgtgttttctttggaataagtttcat-ggaagatgtaaaaacaattttcat 40808810  T
Q  140 tggctattggtta 152  Q
    | || ||||||||    
T  40808811 tagcaattggtta 40808823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 33677651 - 33677536
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||| ||||||| |||||||||||||||| |||||| || ||| ||||||||||||| |||  |  ||||||||||||||||||||||||||||||||||    
T  33677651 tcacgcttattacgaaaactaaaacataaaaatttgaagaatagttttttatgttttttttttactaagttttataggaagatgtaaaaacaattttcat 33677552  T
Q  140 tggctattggttatgg 155  Q
    || |||||||||||||    
T  33677551 tgactattggttatgg 33677536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 40 - 153
Target Start/End: Complemental strand, 28858480 - 28858364
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataat---tttttatgttttctttggaaaaagttttataggaagatgtaaaaacaatttt 136  Q
    |||||| ||||||||||||||||||||||||||||  | |||| |   ||||| ||||||||||| |||||||||||||| |||||||||||| ||||||    
T  28858480 tcacacatattaagaaaactaaaacataagaatttaaaatatagtagttttttgtgttttctttgaaaaaagttttatagaaagatgtaaaaataatttt 28858381  T
Q  137 cattggctattggttat 153  Q
    |||||||||||||||||    
T  28858380 cattggctattggttat 28858364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 46 - 154
Target Start/End: Complemental strand, 5963362 - 5963255
Alignment:
Q  46 ttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggcta 145  Q
    |||||||||||||||||| |||||||||| |||| ||||||||| |||||||||| ||| ||||||||| || ||||||||||| |||||| ||||||||    
T  5963362 ttattaagaaaactaaaatataagaatttagagtctaattttttgtgttttctttagaataagttttat-gggagatgtaaaaataatttttattggcta 5963264  T
Q  146 ttggttatg 154  Q
    |||||||||    
T  5963263 ttggttatg 5963255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 32010270 - 32010168
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| |||||  | |||| | |||| |||||| |||| |||||| || |||||||||||||||||||||||| |||||||||    
T  32010270 tcacacttattaagaaaactaatacatagtagtttgtaatatagttttttgtgttatctttgaaataagttttataggaagatgtaaaaataattttcat 32010171  T
Q  140 tgg 142  Q
    |||    
T  32010170 tgg 32010168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 40 - 131
Target Start/End: Original strand, 11825351 - 11825438
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaaca 131  Q
    ||||||||||||||||||||||||||||||||||| || |||||    || |||||||||||||| |||||| || | ||||||||||||||    
T  11825351 tcacacttattaagaaaactaaaacataagaattttgaatataa----ttgtgttttctttggaataagtttcatggaaagatgtaaaaaca 11825438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 26998485 - 26998383
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||| |||||||||||||||||||||   | |||| |  ||| |||||| |||| |||||  || ||||||||||||||||||||||||||||||||||    
T  26998485 tcacatttattaagaaaactaaaacatggtagtttgtaagatagttttttgtgttatctttaaaataagttttataggaagatgtaaaaacaattttcat 26998386  T
Q  140 tgg 142  Q
    |||    
T  26998385 tgg 26998383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 42 - 142
Target Start/End: Complemental strand, 32273841 - 32273737
Alignment:
Q  42 acacttattaagaaaactaaaacata--ag--aatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 137  Q
    ||||||||||||||||||||||||||  ||  |||||| |  ||| |||||| |||| |||||| || ||||||||||||||||| ||||||||||||||    
T  32273841 acacttattaagaaaactaaaacatagtagtcaatttgtaacatagttttttgtgttatctttgaaataagttttataggaagatataaaaacaattttc 32273742  T
Q  138 attgg 142  Q
    |||||    
T  32273741 attgg 32273737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 86 - 155
Target Start/End: Original strand, 40584436 - 40584505
Alignment:
Q  86 ttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 155  Q
    |||| |||||||||| ||| ||||||||| ||||||||||||||||||||||||||| | ||||||||||    
T  40584436 ttttgtgttttctttagaataagttttatgggaagatgtaaaaacaattttcattggttgttggttatgg 40584505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 46 - 142
Target Start/End: Complemental strand, 38071157 - 38071061
Alignment:
Q  46 ttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 142  Q
    |||||||||||||||||||||   | |||| |  ||| |||||| |||| |||||| || |||||||| ||||||||||||||||||||||||||||    
T  38071157 ttattaagaaaactaaaacatggtagtttgtaacatagttttttgtgttatctttgaaataagttttacaggaagatgtaaaaacaattttcattgg 38071061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 46 - 153
Target Start/End: Complemental strand, 44455151 - 44455046
Alignment:
Q  46 ttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggcta 145  Q
    |||||||||||||||||| ||| |||||||||||||| |||||| |||||| ||| ||| |||||| || |||| | ||||||| ||  |||||||||||    
T  44455151 ttattaagaaaactaaaatatatgaatttggagtatagttttttgtgttttattttgaataagtttcatgggaaaacgtaaaaaaaa--ttcattggcta 44455054  T
Q  146 ttggttat 153  Q
    ||| ||||    
T  44455053 ttgattat 44455046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 40 - 135
Target Start/End: Original strand, 33932915 - 33933010
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattt 135  Q
    ||||||||||||||||||||||||||||  | |||| ||||||||||||| | || |  |||||  ||||||||||| |||||||||| |||||||    
T  33932915 tcacacttattaagaaaactaaaacatagtattttgtagtataattttttgtattattcttggattaagttttatagaaagatgtaaacacaattt 33933010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 141
Target Start/End: Original strand, 23987020 - 23987117
Alignment:
Q  44 acttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattg 141  Q
    ||||||||||||||||||||||||| ||||| || ||||| ||||||||||    |||||| ||| || |||||||| || ||||| |||||||||||    
T  23987020 acttattaagaaaactaaaacataataatttagaatataactttttatgttcatcttggaataagcttcataggaagttgcaaaaataattttcattg 23987117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 147
Target Start/End: Complemental strand, 4707585 - 4707482
Alignment:
Q  41 cacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcatt 140  Q
    |||| |||||||||| |||||||||| |   ||||||||||| |||||| ||||||| || ||| |||||| |  ||||||||| |||||||||||||||    
T  4707585 cacatttattaagaacactaaaacatga---tttggagtatagttttttgtgttttccttagaataagtttaacgggaagatgttaaaacaattttcatt 4707489  T
Q  141 ggctatt 147  Q
    || ||||    
T  4707488 ggttatt 4707482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 40 - 142
Target Start/End: Original strand, 4891630 - 4891733
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataatttttta-tgttttctttggaaaaagttttataggaagatgtaaaaacaattttca 138  Q
    ||||| |||||||||||||||||| |||  | |||| |  ||| ||||||  |||| |||||| || ||||||||||||||||||||||||||||||| |    
T  4891630 tcacatttattaagaaaactaaaatatagtagtttgtaacatagtttttttgtgttatctttgaaataagttttataggaagatgtaaaaacaattttta 4891729  T
Q  139 ttgg 142  Q
    ||||    
T  4891730 ttgg 4891733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 46 - 153
Target Start/End: Original strand, 30830594 - 30830701
Alignment:
Q  46 ttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggcta 145  Q
    |||||||||||| ||||||||||||| |||||||||   ||||| |||||| |||| || |||||| ||  |||||| |||||| || ||||||||| ||    
T  30830594 ttattaagaaaattaaaacataagaaattggagtatgtctttttgtgttttttttgaaataagtttcatgagaagatttaaaaaaaaatttcattggtta 30830693  T
Q  146 ttggttat 153  Q
    ||| ||||    
T  30830694 ttgattat 30830701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 142
Target Start/End: Original strand, 792348 - 792450
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| || ||   |||||  |||||||||||| |||| || |||||| |||||| || | |||||||||||| |||| ||||    
T  792348 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattctcat 792447  T
Q  140 tgg 142  Q
    |||    
T  792448 tgg 792450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 142
Target Start/End: Original strand, 14565365 - 14565467
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| || ||   |||||  |||||||||||| |||| || |||||| |||||| || | |||||||||||| |||| ||||    
T  14565365 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattctcat 14565464  T
Q  140 tgg 142  Q
    |||    
T  14565465 tgg 14565467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 142
Target Start/End: Original strand, 18833902 - 18834004
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||| |||||| ||   ||||||  |||||||||||| |||| |  |||||| |||||| || | ||||||||||||||||| ||||    
T  18833902 tcacacttattaagaaagctaaaatattgtaatttgaggtataattttttgtgttattcttggaataagtttcatggaaagatgtaaaaacaattatcat 18834001  T
Q  140 tgg 142  Q
    |||    
T  18834002 tgg 18834004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 21539921 - 21539819
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| || ||   |||||  |||||||||||| |||| || |||||| |||||| || | |||||||||||| |||| ||||    
T  21539921 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattctcat 21539822  T
Q  140 tgg 142  Q
    |||    
T  21539821 tgg 21539819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 141
Target Start/End: Original strand, 16494974 - 16495019
Alignment:
Q  96 tctttggaaaaagttttataggaagatgtaaaaacaattttcattg 141  Q
    |||||| || ||||||||||||||||||||||||||||||||||||    
T  16494974 tctttgaaataagttttataggaagatgtaaaaacaattttcattg 16495019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 112
Target Start/End: Original strand, 5280536 - 5280595
Alignment:
Q  54 aaaactaaaacataagaatttggagtata-attttttatgttttctttggaaaaagtttt 112  Q
    |||||||||||||||||||||||| ||||  |||||| ||||||||| ||||||||||||    
T  5280536 aaaactaaaacataagaatttggactatagtttttttgtgttttcttgggaaaaagtttt 5280595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 40 - 134
Target Start/End: Complemental strand, 4092175 - 4092081
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaatt 134  Q
    |||||||||||||||||||||| || ||   |||||  |||||||||||| |||| || |||||| |||||| || | |||||||||||| ||||    
T  4092175 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataatt 4092081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 28492684 - 28492582
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| || |||  |||||   ||||||||||| |||| || |||||| |||||| || | || ||||||||| |||| ||||    
T  28492684 tcacacttattaagaaaactaacacttaatgatttgagatataattttttgtgttctccttggaataagtttcatggaaatatgtaaaaataattctcat 28492585  T
Q  140 tgg 142  Q
    |||    
T  28492584 tgg 28492582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 40 - 142
Target Start/End: Original strand, 38071442 - 38071544
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| || ||   ||||| ||||||||||||| | || || || ||| ||||||| | | |||||||||||| |||| ||||    
T  38071442 tcacacttattaagaaaactaacacttagtgatttgaagtataattttttgtattctccttagaataagttttttggaaagatgtaaaaataattctcat 38071541  T
Q  140 tgg 142  Q
    |||    
T  38071542 tgg 38071544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 40 - 142
Target Start/End: Original strand, 38549635 - 38549737
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| || ||   |||||  |||||||||||| | || || |||||| |||||| || | |||||||||||| |||| ||||    
T  38549635 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtattctccttggaataagtttcatggaaagatgtaaaaataattctcat 38549734  T
Q  140 tgg 142  Q
    |||    
T  38549735 tgg 38549737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 44804062 - 44803960
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||| ||| || ||   |||||  |||||||||||| |||| || |||||| |||||| || | |||||||||||| |||| ||||    
T  44804062 tcacacttattaagaaaattaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttaatggaaagatgtaaaaataattctcat 44803963  T
Q  140 tgg 142  Q
    |||    
T  44803962 tgg 44803960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 3201356 - 3201319
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  3201356 ttgaatgtaatttgcatttaattttatgagaataaaca 3201319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 6110331 - 6110368
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  6110331 ttgaatgtaatttgcatttaattttatgagaataaaca 6110368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 6766064 - 6766101
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    |||||||||||||||||||||||| |||||||||||||    
T  6766064 ttgaatgtaatttacatttaatttaatgagaataaaca 6766101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 28858339 - 28858302
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  28858339 ttgaatgtaatttgcatttaattttatgagaataaaca 28858302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 41528286 - 41528249
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  41528286 ttgaatgtaatttgcatttaattttatgagaataaaca 41528249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 45085287 - 45085250
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  45085287 ttgaatgtaatttgcatttaattttatgagaataaaca 45085250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 142
Target Start/End: Original strand, 8032726 - 8032762
Alignment:
Q  106 aagttttataggaagatgtaaaaacaattttcattgg 142  Q
    ||||||||||||||||||||||||||||||| |||||    
T  8032726 aagttttataggaagatgtaaaaacaatttttattgg 8032762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 82
Target Start/End: Complemental strand, 32428136 - 32428100
Alignment:
Q  46 ttattaagaaaactaaaacataagaatttggagtata 82  Q
    ||||||| |||||||||||||||||||||||||||||    
T  32428136 ttattaaaaaaactaaaacataagaatttggagtata 32428100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 140
Target Start/End: Complemental strand, 35832576 - 35832476
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| || ||   |||||  |||||||||||| |||| || |||||| || ||| || | |||||||||||| |||| ||||    
T  35832576 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataaatttcatggaaagatgtaaaaataattctcat 35832477  T
Q  140 t 140  Q
    |    
T  35832476 t 35832476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 153
Target Start/End: Complemental strand, 9709615 - 9709568
Alignment:
Q  106 aagttttataggaagatgtaaaaacaattttcattggctattggttat 153  Q
    ||||||||||||||||||| ||||||||||||||| | ||||| ||||    
T  9709615 aagttttataggaagatgtgaaaacaattttcatttgttattgattat 9709568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 142
Target Start/End: Original strand, 29514471 - 29514569
Alignment:
Q  44 acttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 142  Q
    ||||||||| |||||||| || ||  ||||||  |||||||||||| |||| || || ||| |||||| ||   |||||||||||| ||||||||||||    
T  29514471 acttattaaaaaaactaacacttagtaatttgaggtataattttttgtgttatccttagaataagtttcatgaaaagatgtaaaaataattttcattgg 29514569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Original strand, 30421315 - 30421349
Alignment:
Q  181 aatgtaatttacatttaattttatgagaataaaca 215  Q
    |||||||||||||||||||||||| ||||||||||    
T  30421315 aatgtaatttacatttaattttataagaataaaca 30421349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 35517153 - 35517119
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataa 212  Q
    ||||||||||||| |||||||||||||||||||||    
T  35517153 ttgaatgtaatttgcatttaattttatgagaataa 35517119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 43075913 - 43075812
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| || ||   |||||  || ||| |||||||||| || ||| || |||||| || | |||||||||||| |||||||||    
T  43075913 tcacacttattaagaaaactaacacttagtgatttgaggtgtaa-tttttatgttctccttgaaataagtttcatggaaagatgtaaaaataattttcat 43075815  T
Q  140 tgg 142  Q
    |||    
T  43075814 tgg 43075812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Complemental strand, 45660392 - 45660358
Alignment:
Q  181 aatgtaatttacatttaattttatgagaataaaca 215  Q
    |||||||||| ||||||||||||||||||||||||    
T  45660392 aatgtaatttgcatttaattttatgagaataaaca 45660358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 7645360 - 7645397
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| |||||||||| |||||||||||||    
T  7645360 ttgaatgtaatttgcatttaatttcatgagaataaaca 7645397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 155
Target Start/End: Complemental strand, 9294813 - 9294704
Alignment:
Q  46 ttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggcta 145  Q
    |||||||||||||||||| |||  | |||| ||||||||||||| | ||||  ||| || |||||| || | || |||||||||||||| | ||||| ||    
T  9294813 ttattaagaaaactaaaagatagtagtttgaagtataattttttgtatttttcttgaaataagtttcatggaaaaatgtaaaaacaattcttattggtta 9294714  T
Q  146 ttggttatgg 155  Q
     || ||||||    
T  9294713 atgattatgg 9294704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 28599278 - 28599315
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||| | ||||||||||||||||||||||||    
T  28599278 ttgaatgtaatatgcatttaattttatgagaataaaca 28599315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 136
Target Start/End: Original strand, 30421237 - 30421270
Alignment:
Q  103 aaaaagttttataggaagatgtaaaaacaatttt 136  Q
    ||||||||||||| ||||||||||||||||||||    
T  30421237 aaaaagttttataagaagatgtaaaaacaatttt 30421270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 33198761 - 33198798
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| ||||||||| ||||||||||||||    
T  33198761 ttgaatgtaatttgcatttaattctatgagaataaaca 33198798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 140
Target Start/End: Complemental strand, 10979333 - 10979233
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||| |||||||||||||| || ||   |||||  |||||||||||| |||| |  |||||| |||||| || | |||||||||||| |||| ||||    
T  10979333 tcacactcattaagaaaactaacacttagtgatttgaggtataattttttgtgttcttcttggaataagtttcatggaaagatgtaaaaataattctcat 10979234  T
Q  140 t 140  Q
    |    
T  10979233 t 10979233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 215
Target Start/End: Complemental strand, 12938271 - 12938235
Alignment:
Q  179 tgaatgtaatttacatttaattttatgagaataaaca 215  Q
    |||||||||||| |||||||||| |||||||||||||    
T  12938271 tgaatgtaatttgcatttaatttcatgagaataaaca 12938235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 141
Target Start/End: Complemental strand, 44442230 - 44442198
Alignment:
Q  109 ttttataggaagatgtaaaaacaattttcattg 141  Q
    ||||||| |||||||||||||||||||||||||    
T  44442230 ttttatatgaagatgtaaaaacaattttcattg 44442198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 104; Significance: 5e-52; HSPs: 75)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 18102698 - 18102583
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18102698 tcacacttattaagaaaactaaaacataagaatttggagtataattttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 18102599  T
Q  140 tggctattggttatgg 155  Q
    |||| |||||||||||    
T  18102598 tggccattggttatgg 18102583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 46760249 - 46760364
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  46760249 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 46760348  T
Q  140 tggctattggttatgg 155  Q
    ||||||||||||||||    
T  46760349 tggctattggttatgg 46760364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 6191213 - 6191098
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||  |||||||||||||||||||||||||||||||||||||    
T  6191213 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttcttttaaaaaagttttataggaagatgtaaaaacaattttcat 6191114  T
Q  140 tggctattggttatgg 155  Q
    ||||||||||||||||    
T  6191113 tggctattggttatgg 6191098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 45486123 - 45486008
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  45486123 tcacacttattaagaaaactaaaacataaaaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaataattttcat 45486024  T
Q  140 tggctattggttatgg 155  Q
    ||||||||||||||||    
T  45486023 tggctattggttatgg 45486008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 42 - 155
Target Start/End: Complemental strand, 25944742 - 25944629
Alignment:
Q  42 acacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattg 141  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25944742 acacttattaagaaaactaaaatataagaatttggagtataagtttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattg 25944643  T
Q  142 gctattggttatgg 155  Q
    || |||||||||||    
T  25944642 gccattggttatgg 25944629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 14806037 - 14805923
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||| |||||||||||||||||||||||||||||||||||||    
T  14806037 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtattttctttg-aaaaagttttataggaagatgtaaaaacaattttcat 14805939  T
Q  140 tggctattggttatgg 155  Q
    ||||||||||||||||    
T  14805938 tggctattggttatgg 14805923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 15253031 - 15252917
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||| |||||||||||||||||||||||||||||||||||||    
T  15253031 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtattttctttg-aaaaagttttataggaagatgtaaaaacaattttcat 15252933  T
Q  140 tggctattggttatgg 155  Q
    ||||||||||||||||    
T  15252932 tggctattggttatgg 15252917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 25737619 - 25737734
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||||||||||||| ||||||| ||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  25737619 tcacacttattaagaaaactaaaacataaaaatttggggtatagttttgtgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 25737718  T
Q  140 tggctattggttatgg 155  Q
    ||||||||||||||||    
T  25737719 tggctattggttatgg 25737734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 19912761 - 19912876
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| || |||||||||||||||||||    
T  19912761 tcacatttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttatagtaaaatgtaaaaacaattttcat 19912860  T
Q  140 tggctattggttatgg 155  Q
    ||| ||||||||||||    
T  19912861 tggttattggttatgg 19912876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 35923419 - 35923305
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||  |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  35923419 tcacacttattaagaaaactaaaacataaaaatttggagtatagtttttg-tgttttctttggaaaaagttttatagaaagatgtaaaaacaattttcat 35923321  T
Q  140 tggctattggttatgg 155  Q
    ||||||||||||||||    
T  35923320 tggctattggttatgg 35923305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 40 - 149
Target Start/End: Original strand, 12632336 - 12632445
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||| |||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  12632336 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttatgttttctttgaaaaaagtttcataggaagatgtaaaaacaattttcat 12632435  T
Q  140 tggctattgg 149  Q
    ||||||||||    
T  12632436 tggctattgg 12632445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 4910627 - 4910740
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||| | |||||||||||||||||||||| ||||||  ||||| |||||||||| |||||||||||||||||||||||||||| |||||||||    
T  4910627 tcacacttatttaaaaaactaaaacataagaatttgaagtata--tttttgtgttttctttagaaaaagttttataggaagatgtaaaaataattttcat 4910724  T
Q  140 tggctattggttatgg 155  Q
    ||||||||| ||||||    
T  4910725 tggctattgattatgg 4910740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 59 - 155
Target Start/End: Original strand, 20123691 - 20123787
Alignment:
Q  59 taaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 155  Q
    |||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  20123691 taaaacataagaatttggagtatagttttttgtgtattctttggaaaaagttttatagcaagatgtaaaaacaattttcattggctattgcttatgg 20123787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 47779772 - 47779657
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||||||| |||||||||||| || ||| |||||| |||||||||| ||| |||||| || ||||||||||||||||||||||||    
T  47779772 tcacacttattaagaaaactaaagcataagaatttgtagcatagttttttgtgttttctttagaataagtttcatgggaagatgtaaaaacaattttcat 47779673  T
Q  140 tggctattggttatgg 155  Q
    |||| | |||||||||    
T  47779672 tggcaactggttatgg 47779657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 48 - 155
Target Start/End: Complemental strand, 44683037 - 44682930
Alignment:
Q  48 attaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctatt 147  Q
    ||||||||||||| || |||||||||||||||||||| |||| |||||| ||||||| |||||| ||  ||||||||||||||||||||||||| |||||    
T  44683037 attaagaaaactagaaaataagaatttggagtataatattttgtgttttttttggaataagtttgatgcgaagatgtaaaaacaattttcattgactatt 44682938  T
Q  148 ggttatgg 155  Q
    ||||||||    
T  44682937 ggttatgg 44682930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 22632257 - 22632142
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||||||| ||||| | |||| || |||  ||||| ||||||||||| || |||||| || ||||||||||||||||||||||||    
T  22632257 tcacacttattaagaaaactaaagcataaaagtttgtagcatagatttttgtgttttctttgaaataagtttcatgggaagatgtaaaaacaattttcat 22632158  T
Q  140 tggctattggttatgg 155  Q
    ||| ||||||||||||    
T  22632157 tggatattggttatgg 22632142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 40 - 154
Target Start/End: Complemental strand, 16917639 - 16917525
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||| |||||||||| |||||| | |||||  |||| | |||||||||||| |||||| || ||||||||||||||||||||||||    
T  16917639 tcacacttattaagaaaattaaaacataaaaatttgaaatataacattttgttttttctttggaataagtttcatgggaagatgtaaaaacaattttcat 16917540  T
Q  140 tggctattggttatg 154  Q
    |  ||||||||||||    
T  16917539 taactattggttatg 16917525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 42 - 154
Target Start/End: Complemental strand, 14574730 - 14574618
Alignment:
Q  42 acacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattg 141  Q
    ||||||||||||||||| |||| |||||||||||||||||| |||||| |||||||||   || |||||| || |||||||||||||| ||||| |||||    
T  14574730 acacttattaagaaaaccaaaatataagaatttggagtatagttttttgtgttttcttgataataagtttcatgggaagatgtaaaaataatttccattg 14574631  T
Q  142 gctattggttatg 154  Q
     ||||||||||||    
T  14574630 tctattggttatg 14574618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 84 - 153
Target Start/End: Original strand, 35068885 - 35068954
Alignment:
Q  84 ttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttat 153  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  35068885 ttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttaattagctattggttat 35068954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 40 - 140
Target Start/End: Original strand, 35887961 - 35888061
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||| ||||||||||||||  | |||| |  |||||||||| |||| |||||| || || |||||||||||||||||||||||||||||||    
T  35887961 tcacacttattaaaaaaactaaaacatagtagtttgtaacataattttttgtgttatctttgaaataacttttataggaagatgtaaaaacaattttcat 35888060  T
Q  140 t 140  Q
    |    
T  35888061 t 35888061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 42 - 154
Target Start/End: Complemental strand, 15995886 - 15995773
Alignment:
Q  42 acacttattaagaaaactaaaacataagaatttggagtata-attttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcatt 140  Q
    ||||||||||||||||| |||| ||||||||||||||||||  |||||| |||||||||   || |||||| || | |||||||||||| ||||| ||||    
T  15995886 acacttattaagaaaaccaaaatataagaatttggagtatagtttttttgtgttttcttcataataagtttcatggaaagatgtaaaaataatttccatt 15995787  T
Q  141 ggctattggttatg 154  Q
    || |||||||||||    
T  15995786 ggttattggttatg 15995773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 66 - 155
Target Start/End: Original strand, 2610586 - 2610675
Alignment:
Q  66 taagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 155  Q
    ||||||||||||||||| ||||||  | || |||||||| ||  ||||||| |||||||||||||| ||||| |||||||||||||||||    
T  2610586 taagaatttggagtatatttttttgcgcttcctttggaataaaatttatagaaagatgtaaaaacatttttctttggctattggttatgg 2610675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 42 - 142
Target Start/End: Complemental strand, 40560543 - 40560443
Alignment:
Q  42 acacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattg 141  Q
    ||||||||||| |||||||| || ||| ||||||  |||||||||||| |||| || ||| || ||||||||||| |||||||||||| |||| ||||||    
T  40560543 acacttattaaaaaaactaacacttaataatttgaggtataattttttgtgttctccttgaaataagttttatagaaagatgtaaaaataattctcattg 40560444  T
Q  142 g 142  Q
    |    
T  40560443 g 40560443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 54 - 155
Target Start/End: Complemental strand, 48413867 - 48413771
Alignment:
Q  54 aaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttat 153  Q
    ||||||| |||||||||||||||||||||||||| |  ||||| ||   || |||||||||  ||||||| ||||||||||||||||| |||||||||||    
T  48413867 aaaactacaacataagaatttggagtataattttgt--gttttttt---aataagttttatgagaagatgcaaaaacaattttcattgactattggttat 48413773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 42 - 142
Target Start/End: Complemental strand, 48879549 - 48879449
Alignment:
Q  42 acacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattg 141  Q
    |||||||||||||||||||| || |||  |||||  |||||||||||| | || || |||||| ||||||||||| |||||||||||| |||| ||||||    
T  48879549 acacttattaagaaaactaacacttaatgatttgaggtataattttttgtattctccttggaataagttttatagaaagatgtaaaaataattctcattg 48879450  T
Q  142 g 142  Q
    |    
T  48879449 g 48879449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 103 - 154
Target Start/End: Complemental strand, 9158194 - 9158143
Alignment:
Q  103 aaaaagttttataggaagatgtaaaaacaattttcattggctattggttatg 154  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  9158194 aaaaagttttataggaagatgtaaaaacaattttctttggccattggttatg 9158143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 40 - 139
Target Start/End: Original strand, 37767011 - 37767110
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||| ||||||||||||||||||||| | ||||||||||||| |||||| ||||||||||  ||  | ||| || |||| || ||||||||||||||||    
T  37767011 tcacatttattaagaaaactaaaacatgataatttggagtatagttttttgtgttttctttaaaactaatttcatgggaacatataaaaacaattttcat 37767110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 9818631 - 9818529
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| |  ||   |||||  ||||||||||||||||| || |||||| ||||||||| | |||||||||||| |||| ||||    
T  9818631 tcacacttattaagaaaactaacatttagtgatttgaggtataattttttatgttctccttggaataagttttatggaaagatgtaaaaataattctcat 9818532  T
Q  140 tgg 142  Q
    |||    
T  9818531 tgg 9818529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 10720556 - 10720454
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| |  ||   |||||  ||||||||||||||||| || |||||| ||||||||| | |||||||||||| |||| ||||    
T  10720556 tcacacttattaagaaaactaacatttagtgatttgaggtataattttttatgttctccttggaataagttttatggaaagatgtaaaaataattctcat 10720457  T
Q  140 tgg 142  Q
    |||    
T  10720456 tgg 10720454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 103 - 155
Target Start/End: Complemental strand, 4069108 - 4069056
Alignment:
Q  103 aaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 155  Q
    |||||||||||||| |||||||||||| |||||||||||| ||||||||||||    
T  4069108 aaaaagttttatagaaagatgtaaaaagaattttcattggttattggttatgg 4069056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 142
Target Start/End: Original strand, 41815646 - 41815746
Alignment:
Q  42 acacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattg 141  Q
    |||||||||||||||||||| || ||   |||||  |||||||||||| |||| || |||||| ||||||||| | |||||||||||| |||| ||||||    
T  41815646 acacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagttttatggaaagatgtaaaaataattctcattg 41815745  T
Q  142 g 142  Q
    |    
T  41815746 g 41815746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 92 - 155
Target Start/End: Original strand, 31549947 - 31550010
Alignment:
Q  92 gttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 155  Q
    ||||||||| ||| || |||||||||||||||||||||||| |||||||| | |||||||||||    
T  31549947 gttttctttagaataaattttataggaagatgtaaaaacaactttcattgacaattggttatgg 31550010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 33153202 - 33153087
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||| ||||| ||||||||| | |||| ||||||||||||| |||| |  ||| || || |||||| | ||||||||||||||||| | ||    
T  33153202 tcacacttattaaaaaaacaaaaacataatagtttgaagtataattttttgtgttcttcttgaaataaattttatggaaagatgtaaaaacaattcttat 33153103  T
Q  140 tggctattggttatgg 155  Q
    ||| || || ||||||    
T  33153102 tggttaatgattatgg 33153087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 71 - 147
Target Start/End: Original strand, 47557622 - 47557700
Alignment:
Q  71 atttggagtataattttttatgttttctttgg--aaaaagttttataggaagatgtaaaaacaattttcattggctatt 147  Q
    |||||||||||| |||||| |||||| |||    |||||  ||||||||||||||||||||||||||||||||||||||    
T  47557622 atttggagtatagttttttgtgtttttttttttaaaaaaaatttataggaagatgtaaaaacaattttcattggctatt 47557700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 142
Target Start/End: Original strand, 19933006 - 19933108
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| || ||   |||||  |||| ||||||| |||| || |||||| |||||| || | |||||||||||| |||||||||    
T  19933006 tcacacttattaagaaaactaacacttagtgatttgaggtatgattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattttcat 19933105  T
Q  140 tgg 142  Q
    |||    
T  19933106 tgg 19933108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 35181355 - 35181253
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| || ||   |||||  |||||||||||| |||| || |||||| |||||| || | |||||||||||| |||| ||||    
T  35181355 tcacacttattaagaaaactaacacttactgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattctcat 35181256  T
Q  140 tgg 142  Q
    |||    
T  35181255 tgg 35181253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 135
Target Start/End: Complemental strand, 11780171 - 11780090
Alignment:
Q  54 aaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattt 135  Q
    |||||||||| ||||||||||||| |||| |||||  ||||||||||  || || |||||| |||||||||||||| |||||    
T  11780171 aaaactaaaatataagaatttggaatatagtttttcgtgttttctttaaaataaattttattggaagatgtaaaaataattt 11780090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 141
Target Start/End: Original strand, 31769010 - 31769055
Alignment:
Q  96 tctttggaaaaagttttataggaagatgtaaaaacaattttcattg 141  Q
    |||||| || ||||||||||||||||||||||||||||||||||||    
T  31769010 tctttgaaataagttttataggaagatgtaaaaacaattttcattg 31769055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 10248698 - 10248594
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaa-tttggagtataatttt-ttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 137  Q
    ||||| ||||||||||||||||||||| || | |||| |  ||| |||| || |||| || ||| || ||||||||||| ||||||||||||||||||||    
T  10248698 tcacatttattaagaaaactaaaacattagtagtttgtaacatagttttcttgtgttatccttgaaataagttttatagaaagatgtaaaaacaattttc 10248599  T
Q  138 attgg 142  Q
    |||||    
T  10248598 attgg 10248594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 153
Target Start/End: Original strand, 24151640 - 24151687
Alignment:
Q  106 aagttttataggaagatgtaaaaacaattttcattggctattggttat 153  Q
    ||||||||||||||||||||||||||||||||| ||  ||||||||||    
T  24151640 aagttttataggaagatgtaaaaacaattttcactgattattggttat 24151687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 44 - 142
Target Start/End: Complemental strand, 3157595 - 3157497
Alignment:
Q  44 acttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 142  Q
    |||||||||||||||||| || ||   |||||  |||||||||||| |||| |||||| || |||||| || | |||||||||||| |||| |||||||    
T  3157595 acttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctctttgaaataagtttcatggaaagatgtaaaaataattctcattgg 3157497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 40 - 142
Target Start/End: Original strand, 7989259 - 7989361
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| || ||   |||||  |||||||||||| |||| || |||||| || ||| || | |||||||||||| |||| ||||    
T  7989259 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataaatttcatggaaagatgtaaaaataattctcat 7989358  T
Q  140 tgg 142  Q
    |||    
T  7989359 tgg 7989361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 40 - 142
Target Start/End: Original strand, 18206270 - 18206372
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||| ||| || ||   |||||  |||||||||||| |||| || |||||| |||||| || | |||||||||||| |||| ||||    
T  18206270 tcacacttattaagaaaattaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattctcat 18206369  T
Q  140 tgg 142  Q
    |||    
T  18206370 tgg 18206372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 40 - 142
Target Start/End: Original strand, 22111281 - 22111383
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| || ||   |||||  |||||||||||| |||| || |||||| || |||| | | |||||||||||| |||| ||||    
T  22111281 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataaattttctggaaagatgtaaaaataattctcat 22111380  T
Q  140 tgg 142  Q
    |||    
T  22111381 tgg 22111383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 40583308 - 40583206
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| || ||   |||||  |||||||||||| |||| || |||||| || |||| | | |||||||||||| |||| ||||    
T  40583308 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataaattttctggaaagatgtaaaaataattctcat 40583209  T
Q  140 tgg 142  Q
    |||    
T  40583208 tgg 40583206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 40 - 134
Target Start/End: Complemental strand, 42617834 - 42617740
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaatt 134  Q
    ||||||||||||| |||||||| || |||  |||||  |||||||||||| |||| || |||||| |||||| || | |||||||||||| ||||    
T  42617834 tcacacttattaaaaaaactaacacttaatgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataatt 42617740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 40 - 142
Target Start/End: Original strand, 43107856 - 43107958
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||| |||||||||||||||| || ||   |||||  |||||||||||| |||| || |||||| |||||| || | |||||||||||| |||| ||||    
T  43107856 tcacatttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattctcat 43107955  T
Q  140 tgg 142  Q
    |||    
T  43107956 tgg 43107958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 12633117 - 12633154
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  12633117 ttgaatgtaatttgcatttaattttatgagaataaaca 12633154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 18102560 - 18102523
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  18102560 ttgaatgtaatttgcatttaattttatgagaataaaca 18102523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 20123810 - 20123847
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  20123810 ttgaatgtaatttgcatttaattttatgagaataaaca 20123847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 25944606 - 25944569
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  25944606 ttgaatgtaatttgcatttaattttatgagaataaaca 25944569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 142
Target Start/End: Original strand, 19964151 - 19964247
Alignment:
Q  46 ttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 142  Q
    |||||||||||||||| || ||   |||||  |||| ||||||| |||| || |||||| |||||| || | |||||||||||| ||||||||||||    
T  19964151 ttattaagaaaactaacacttagtgatttgaggtatgattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattttcattgg 19964247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 89
Target Start/End: Original strand, 19492391 - 19492434
Alignment:
Q  46 ttattaagaaaactaaaacataagaatttggagtataatttttt 89  Q
    ||||||||||||||||||||||| ||||| |||||||| |||||    
T  19492391 ttattaagaaaactaaaacataaaaatttagagtataacttttt 19492434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 147
Target Start/End: Complemental strand, 29713357 - 29713250
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||| |||||||||||||||| |||| |   |||| |||||| ||| || |||  ||||| ||| || ||| |||| ||| ||||||||||||||||||    
T  29713357 tcacatttattaagaaaactaagacatcattgtttgtagtatagtttcttgtgtcatctttagaataactttcatagaaagttgtaaaaacaattttcat 29713258  T
Q  140 tggctatt 147  Q
    ||| ||||    
T  29713257 tggatatt 29713250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 82
Target Start/End: Original strand, 31549751 - 31549790
Alignment:
Q  43 cacttattaagaaaactaaaacataagaatttggagtata 82  Q
    |||||||||||||||||||||||||| || ||||||||||    
T  31549751 cacttattaagaaaactaaaacataaaaaattggagtata 31549790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 147
Target Start/End: Complemental strand, 38260484 - 38260377
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||| |||| ||||||||   | |||| | |||| |||||| |||| |  ||| || ||||||||||| ||| |||||||| |||||||||    
T  38260484 tcacacttattaaaaaaattaaaacattgtagtttgtaatatagttttttgtgttattcttgaaataagttttatagaaagttgtaaaaataattttcat 38260385  T
Q  140 tggctatt 147  Q
    ||| ||||    
T  38260384 tggttatt 38260377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Complemental strand, 6191072 - 6191038
Alignment:
Q  181 aatgtaatttacatttaattttatgagaataaaca 215  Q
    |||||||||| ||||||||||||||||||||||||    
T  6191072 aatgtaattttcatttaattttatgagaataaaca 6191038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 153
Target Start/End: Original strand, 8015732 - 8015778
Alignment:
Q  107 agttttataggaagatgtaaaaacaattttcattggctattggttat 153  Q
    ||||||||| |||||||||||||||||||| ||||| ||||| ||||    
T  8015732 agttttataagaagatgtaaaaacaatttttattggttattgattat 8015778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 14805900 - 14805866
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataa 212  Q
    ||||||||||||| |||||||||||||||||||||    
T  14805900 ttgaatgtaatttgcatttaattttatgagaataa 14805866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 15252894 - 15252860
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataa 212  Q
    ||||||||||||| |||||||||||||||||||||    
T  15252894 ttgaatgtaatttgcatttaattttatgagaataa 15252860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 23106616 - 23106514
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| || ||   |||||  |||||||||||| |||| || ||  || |||||| || | |||||||||||| |||| ||||    
T  23106616 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttaaaataagtttcatggaaagatgtaaaaataattctcat 23106517  T
Q  140 tgg 142  Q
    |||    
T  23106516 tgg 23106514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 25737757 - 25737791
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataa 212  Q
    ||||||||||||| |||||||||||||||||||||    
T  25737757 ttgaatgtaatttgcatttaattttatgagaataa 25737791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 134
Target Start/End: Complemental strand, 34808382 - 34808288
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaatt 134  Q
    ||||||||| |||||||||||| || ||   |||||  |||||||||||| |||| |  ||||||||||||| || | |||||||||||| ||||    
T  34808382 tcacacttagtaagaaaactaatacttagtgatttgaggtataattttttgtgttcttcttggaaaaagtttcatggaaagatgtaaaaataatt 34808288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 35923282 - 35923248
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataa 212  Q
    ||||||||||||| |||||||||||||||||||||    
T  35923282 ttgaatgtaatttgcatttaattttatgagaataa 35923248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 140
Target Start/End: Complemental strand, 39170636 - 39170602
Alignment:
Q  106 aagttttataggaagatgtaaaaacaattttcatt 140  Q
    |||||||||| ||||||||||||||||||||||||    
T  39170636 aagttttatacgaagatgtaaaaacaattttcatt 39170602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 41889334 - 41889232
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| || ||   |||||  |||||||||||| | || || ||| || |||||| || | |||||||||||| |||| ||||    
T  41889334 tcacacttattaagaaaactaacacttagtgatttgatgtataattttttgtattctccttgaaataagtttcatggaaagatgtaaaaataattctcat 41889235  T
Q  140 tgg 142  Q
    |||    
T  41889234 tgg 41889232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 44600609 - 44600507
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||| |||||||||||||||| || ||   |||||  |||||||||||| |||| || || ||| |||||| |  | |||||||||||| |||||||||    
T  44600609 tcacatttattaagaaaactaacacttagcgatttgaggtataattttttgtgttctccttagaataagtttcaaggaaagatgtaaaaataattttcat 44600510  T
Q  140 tgg 142  Q
    |||    
T  44600509 tgg 44600507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 45485985 - 45485951
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataa 212  Q
    ||||||||||||| |||||||||||||||||||||    
T  45485985 ttgaatgtaatttgcatttaattttatgagaataa 45485951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 46760387 - 46760421
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataa 212  Q
    ||||||||||||| |||||||||||||||||||||    
T  46760387 ttgaatgtaatttgcatttaattttatgagaataa 46760421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 4910763 - 4910800
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| |||||||||||||||| |||||||    
T  4910763 ttgaatgtaatttgcatttaattttatgagcataaaca 4910800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 9158120 - 9158083
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| ||||||||||||| ||||||||||    
T  9158120 ttgaatgtaatttgcatttaattttataagaataaaca 9158083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Complemental strand, 11780044 - 11780011
Alignment:
Q  182 atgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||| ||||||||||||||||||||||||    
T  11780044 atgtaatttgcatttaattttatgagaataaaca 11780011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 40 - 81
Target Start/End: Original strand, 27810738 - 27810779
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtat 81  Q
    ||||||||||||| |||||  |||||||||||||||||||||    
T  27810738 tcacacttattaacaaaacagaaacataagaatttggagtat 27810779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 35068965 - 35069002
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| |||||||| |||||||||||||||    
T  35068965 ttgaatgtaatttgcatttaatattatgagaataaaca 35069002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 134
Target Start/End: Original strand, 48937878 - 48937934
Alignment:
Q  78 gtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaatt 134  Q
    |||||||||||| |||| || |||||| ||||||||| | |||||||||||| ||||    
T  48937878 gtataattttttgtgttctccttggaataagttttatggaaagatgtaaaaataatt 48937934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 104; Significance: 5e-52; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 21542586 - 21542471
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||    
T  21542586 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaatttttat 21542487  T
Q  140 tggctattggttatgg 155  Q
    ||||||||||||||||    
T  21542486 tggctattggttatgg 21542471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 42 - 155
Target Start/End: Original strand, 11082240 - 11082353
Alignment:
Q  42 acacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattg 141  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  11082240 acacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttatagggagatgtaaaaacaattttcattg 11082339  T
Q  142 gctattggttatgg 155  Q
    ||||||||||||||    
T  11082340 gctattggttatgg 11082353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 35129047 - 35129163
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaa-aaacaattttca 138  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  35129047 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaataaacaattttca 35129146  T
Q  139 ttggctattggttatgg 155  Q
    |||| ||||||||||||    
T  35129147 ttggttattggttatgg 35129163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 34177634 - 34177749
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||| ||||||||||||||||||| |||| |||||| |||||||||||||||||  |||||||| |||||||||||||||||||||    
T  34177634 tcacacttattaagaaaattaaaacataagaatttggaatatagttttttgtgttttctttggaaaaaaatttatagggagatgtaaaaacaattttcat 34177733  T
Q  140 tggctattggttatgg 155  Q
    ||||||||||||||||    
T  34177734 tggctattggttatgg 34177749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 46 - 155
Target Start/End: Original strand, 30794191 - 30794300
Alignment:
Q  46 ttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggcta 145  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||    
T  30794191 ttattaagaaaactaaaatataagaatttgaagtataattttttatgttttatttggaataagttttataggaagatgtaaaaacatttttcattggcta 30794290  T
Q  146 ttggttatgg 155  Q
    ||||| ||||    
T  30794291 ttggtgatgg 30794300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 7274868 - 7274983
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||||||||||||||||| || ||| |||||| | |||||||||||| |||||| || ||||||||||||||||||||||||    
T  7274868 tcacacttattaagaaaactaaaacataagaatttgtagcatagttttttgtattttctttggaataagtttcatgggaagatgtaaaaacaattttcat 7274967  T
Q  140 tggctattggttatgg 155  Q
    ||||||||||||||||    
T  7274968 tggctattggttatgg 7274983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 46 - 155
Target Start/End: Original strand, 3095719 - 3095827
Alignment:
Q  46 ttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggcta 145  Q
    ||||||||||||||||| ||||| ||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  3095719 ttattaagaaaactaaagcataaaaatttggagtatagttttttgtgttttctttggaaaa-gttttataggaagatgtaaaaacaattttcattggcta 3095817  T
Q  146 ttggttatgg 155  Q
    ||| ||||||    
T  3095818 ttgattatgg 3095827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 12461422 - 12461537
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagtttt-ataggaagatgtaaaaacaattttca 138  Q
    ||||| ||||||||||||||||||||| |||||||||| |||| |||||| | ||||||||| || ||||||| |||| |||||||||||||||||||||    
T  12461422 tcacatttattaagaaaactaaaacatgagaatttggaatatagtttttt-tattttctttgaaataagtttttatagaaagatgtaaaaacaattttca 12461520  T
Q  139 ttggctattggttatgg 155  Q
    |||||||||||||||||    
T  12461521 ttggctattggttatgg 12461537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 40 - 136
Target Start/End: Original strand, 5822027 - 5822123
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaatttt 136  Q
    |||||||||||||||||||||||| || | | |||| |||||||||| || |||| ||||||||| |||||| |||| |||||||||||||||||||    
T  5822027 tcacacttattaagaaaactaaaatattatagtttgtagtataatttcttgtgttatctttggaataagtttcatagaaagatgtaaaaacaatttt 5822123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 17751737 - 17751852
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||| ||||| |||||||||||||||||| |||||| |||||||||| ||  ||||||| |   || ||||||||||| |  ||||    
T  17751737 tcacacttattaagaaaattaaaatataagaatttggagtatagttttttgtgttttctttagattaagtttttttaaaaaatgtaaaaacagtgctcat 17751836  T
Q  140 tggctattggttatgg 155  Q
    ||||||||| ||||||    
T  17751837 tggctattgattatgg 17751852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 40 - 141
Target Start/End: Original strand, 14573121 - 14573221
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||| |||||||||||||||||| ||| ||||||||||||||| ||||| | ||||||||| || |||| |||| ||| |||||||||| |||||||||    
T  14573121 tcacatttattaagaaaactaaaatatatgaatttggagtataa-tttttgtattttctttgaaataagtattatgggatgatgtaaaaataattttcat 14573219  T
Q  140 tg 141  Q
    ||    
T  14573220 tg 14573221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 4032156 - 4032051
Alignment:
Q  40 tcacacttattaagaaaactaaaacata--agaa-tttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaatttt 136  Q
    ||||||||||||||||||||||||||||  || | |||| |  ||| |||||| |||| |||||| || ||||||||| |||||||||||||||||||||    
T  4032156 tcacacttattaagaaaactaaaacatagtagtagtttgtaacatagttttttgtgttatctttgaaataagttttatcggaagatgtaaaaacaatttt 4032057  T
Q  137 cattgg 142  Q
    ||||||    
T  4032056 cattgg 4032051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 84 - 142
Target Start/End: Complemental strand, 16524501 - 16524443
Alignment:
Q  84 ttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 142  Q
    |||||| |||| |||||| || |||||||||||||||||||||||||||||||||||||    
T  16524501 ttttttgtgttatctttgaaataagttttataggaagatgtaaaaacaattttcattgg 16524443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 9428913 - 9428857
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgtttt 96  Q
    ||||| ||||||| |||||||||||||||||||||| ||||||||||||| ||||||    
T  9428913 tcacatttattaataaaactaaaacataagaatttgaagtataattttttgtgtttt 9428857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 40 - 147
Target Start/End: Original strand, 5881746 - 5881852
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||| ||||||||||| |||||| || | | |||| |||||||||| || |||| ||||||||  |||||| |||| ||||||||||||||||||| ||    
T  5881746 tcacatttattaagaaa-ctaaaatattatagtttgcagtataatttcttctgttatctttggactaagtttcatagaaagatgtaaaaacaattttaat 5881844  T
Q  140 tggctatt 147  Q
    ||| ||||    
T  5881845 tggttatt 5881852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 142
Target Start/End: Complemental strand, 4988065 - 4988007
Alignment:
Q  84 ttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 142  Q
    |||||| |||| |||||| || |||||||||||||||||||||||| ||||||||||||    
T  4988065 ttttttgtgttatctttgaaataagttttataggaagatgtaaaaataattttcattgg 4988007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 5300659 - 5300701
Alignment:
Q  106 aagttttataggaagatgtaaaaacaattttcattggctattg 148  Q
    ||||||||||||||||||||||||||||||||||||| |||||    
T  5300659 aagttttataggaagatgtaaaaacaattttcattggttattg 5300701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 96 - 142
Target Start/End: Original strand, 16013481 - 16013527
Alignment:
Q  96 tctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 142  Q
    |||||| || |||||||||||||||||||||||||||||||||||||    
T  16013481 tctttgaaataagttttataggaagatgtaaaaacaattttcattgg 16013527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 141
Target Start/End: Complemental strand, 15830861 - 15830760
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||| ||||||| ||||||||||||||| | |||  |  |||||||||| |||| | |||  || |||||| ||||||||||||||||| |||||||||    
T  15830861 tcacatttattaaaaaaactaaaacataatagtttctaacataattttttgtgttatttttaaaataagtttaataggaagatgtaaaaaaaattttcat 15830762  T
Q  140 tg 141  Q
    ||    
T  15830761 tg 15830760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 142
Target Start/End: Complemental strand, 17598450 - 17598355
Alignment:
Q  47 tattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 142  Q
    ||||||||||| ||| || |||  |||||  |||||||||||| |||| ||||||||| || |||||| | |||||||||||| |||| |||||||    
T  17598450 tattaagaaaattaacacttaatgatttgaggtataattttttgtgttctctttggaataaattttatggaaagatgtaaaaataattctcattgg 17598355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 140
Target Start/End: Original strand, 17721802 - 17721902
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| || ||   |||||  |||||||||||| |||| || |||||| |||||| || | || ||||||||| |||| ||||    
T  17721802 tcacacttattaagaaaactaatacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatggaaacatgtaaaaataattctcat 17721901  T
Q  140 t 140  Q
    |    
T  17721902 t 17721902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 148
Target Start/End: Complemental strand, 21964121 - 21964013
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||| ||| ||||||||||||||  |||| |   ||||||||||| |||| || ||  || ||||||||| | |||||||||||| |||||| ||    
T  21964121 tcacacttactaataaaactaaaacatagtaattagagatataattttttgtgttctccttaaaataagttttatggaaagatgtaaaaataatttttat 21964022  T
Q  140 tggctattg 148  Q
    ||| |||||    
T  21964021 tggttattg 21964013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 140
Target Start/End: Complemental strand, 30766610 - 30766510
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| || ||   |||||   ||||||||||| |||| || |||||| |||||| || | |||||||||||| |||| ||||    
T  30766610 tcacacttattaagaaaactaacacttagtgatttgagatataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattctcat 30766511  T
Q  140 t 140  Q
    |    
T  30766510 t 30766510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 3095850 - 3095884
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataa 212  Q
    ||||||||||||| |||||||||||||||||||||    
T  3095850 ttgaatgtaatttgcatttaattttatgagaataa 3095884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 10228076 - 10227974
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| || ||   |||||  |||||||||||  |||| || ||| || |||||| || | |||||||||||| |||| ||||    
T  10228076 tcacacttattaagaaaactaacacttagtgatttgaggtataatttttagtgttctccttgaaataagtttcatcgaaagatgtaaaaataattctcat 10227977  T
Q  140 tgg 142  Q
    |||    
T  10227976 tgg 10227974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 11082376 - 11082410
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataa 212  Q
    ||||||||||||| |||||||||||||||||||||    
T  11082376 ttgaatgtaatttgcatttaattttatgagaataa 11082410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 12278870 - 12278768
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| || ||   |||||  |||||||||||| |||| || || ||| |||||| || | ||| |||||||| |||| ||||    
T  12278870 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttagaataagtttcatggaaagttgtaaaaataattctcat 12278771  T
Q  140 tgg 142  Q
    |||    
T  12278770 tgg 12278768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 34177772 - 34177806
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataa 212  Q
    ||||||||||||| |||||||||||||||||||||    
T  34177772 ttgaatgtaatttgcatttaattttatgagaataa 34177806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 106 - 139
Target Start/End: Complemental strand, 3888527 - 3888494
Alignment:
Q  106 aagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||| |||||||||||||    
T  3888527 aagttttataggaagatgtagaaacaattttcat 3888494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 31107221 - 31107184
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| ||||||||||||| ||||||||||    
T  31107221 ttgaatgtaatttgcatttaattttataagaataaaca 31107184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 104; Significance: 5e-52; HSPs: 112)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 15959633 - 15959748
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  15959633 tcacatttattaagaaaactaaaacataagaatttggagtataattttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 15959732  T
Q  140 tggctattggttatgg 155  Q
    ||||||||||||||||    
T  15959733 tggctattggttatgg 15959748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 2126206 - 2126091
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||| |||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  2126206 tcacatttattaagaaaactaaaacataagaatttggaatatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 2126107  T
Q  140 tggctattggttatgg 155  Q
    ||||||||||||||||    
T  2126106 tggctattggttatgg 2126091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 24190637 - 24190522
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| | |||||||||||||||||||||    
T  24190637 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttatacggagatgtaaaaacaattttcat 24190538  T
Q  140 tggctattggttatgg 155  Q
    ||||||||||||||||    
T  24190537 tggctattggttatgg 24190522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 6787006 - 6786891
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  6787006 tcacacttattaagaaaactaaaacatgagaatttggagtatagttttttgtgttttctttggaaaaagttttatatgaagatgtaaacacaattttcat 6786907  T
Q  140 tggctattggttatgg 155  Q
    ||||||||||||||||    
T  6786906 tggctattggttatgg 6786891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 11241195 - 11241080
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||| |||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  11241195 tcacacttattaaaaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaccaattttcat 11241096  T
Q  140 tggctattggttatgg 155  Q
    ||||||||||||||||    
T  11241095 tggctattggttatgg 11241080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 32623998 - 32624113
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||| |||||||||||||||||||||||||||||||||| || |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  32623998 tcacaattattaagaaaactaaaacataagaatttggagtgtagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 32624097  T
Q  140 tggctattggttatgg 155  Q
    |||| |||||||||||    
T  32624098 tggccattggttatgg 32624113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 33369718 - 33369604
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||| | |||||||||||||||||||||    
T  33369718 tcacacttattaagaaaactaaaacataaaaatttggagtatagttttttgtgttttctttggaaaaagttttatatg-agatgtaaaaacaattttcat 33369620  T
Q  140 tggctattggttatgg 155  Q
    ||||||||||||||||    
T  33369619 tggctattggttatgg 33369604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 39555579 - 39555694
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||| ||||||||||||||||||||||||  ||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  39555579 tcacacttattaagaaaattaaaacataagaatttggagtataggtttttgtgttttctttgaaaaaagttttatagaaagatgtaaaaacaattttcat 39555678  T
Q  140 tggctattggttatgg 155  Q
    ||||||||||||||||    
T  39555679 tggctattggttatgg 39555694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 41 - 155
Target Start/End: Complemental strand, 6785622 - 6785509
Alignment:
Q  41 cacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcatt 140  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  6785622 cacacttattaagaaaactaaaacataagaatt-ggagtatagttttttgtgttttcttttgaaaaagttttatatgaagatgtaaaaacaattttcatt 6785524  T
Q  141 ggctattggttatgg 155  Q
    |||||||||||||||    
T  6785523 ggctattggttatgg 6785509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 40 - 153
Target Start/End: Original strand, 28016739 - 28016852
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||  ||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  28016739 tcacacttattaagaaaactaaaacataagaatttagagtatagtttttggtgttttctttgaaaaatgttttataggaagatgtaaaaacaattttcat 28016838  T
Q  140 tggctattggttat 153  Q
    ||||||||||||||    
T  28016839 tggctattggttat 28016852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 35691560 - 35691446
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||| ||    
T  35691560 tcacatttattaagaaa-ctaaaacataagaatttggagtataattttttgtgttttctttgaaaaaagttttatagggagatgtaaaaacaatttttat 35691462  T
Q  140 tggctattggttatgg 155  Q
    ||||||||||||||||    
T  35691461 tggctattggttatgg 35691446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 44 - 155
Target Start/End: Original strand, 42965813 - 42965923
Alignment:
Q  44 acttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggc 143  Q
    ||||||||||||||||||||||||| |||||| ||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  42965813 acttattaagaaaactaaaacataaaaatttgaagtttagttttttgtgttttctttggaaaaa-ttttataggaagatgtaaaaacaattttcattggc 42965911  T
Q  144 tattggttatgg 155  Q
    ||||||||||||    
T  42965912 tattggttatgg 42965923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 43 - 148
Target Start/End: Original strand, 7467958 - 7468064
Alignment:
Q  43 cacttattaagaaaactaaaacataagaatttggagta-taattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattg 141  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  7467958 cacttattaagaaaactaaaacataagaatttgaagtaataattttttgtgttttctttggaaaaagttttaaaggaagatgtaaatacaattttcattg 7468057  T
Q  142 gctattg 148  Q
    |||||||    
T  7468058 gctattg 7468064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 40 - 148
Target Start/End: Complemental strand, 52985101 - 52984993
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||||| |||||| |  ||||||||||||||||||||||||    
T  52985101 tcacacttattaagaaaactaatacataagaatttggagtatagttttttgtgttttctttggaataagtttcacgggaagatgtaaaaacaattttcat 52985002  T
Q  140 tggctattg 148  Q
    |||||||||    
T  52985001 tggctattg 52984993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 48 - 155
Target Start/End: Original strand, 12448969 - 12449075
Alignment:
Q  48 attaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctatt 147  Q
    |||||||||| ||||| |||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  12448969 attaagaaaattaaaa-ataagaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcattggccatt 12449067  T
Q  148 ggttatgg 155  Q
    ||||||||    
T  12449068 ggttatgg 12449075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 43667296 - 43667411
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||| |||||||||||| ||| ||||||||||||  ||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  43667296 tcacatttattaagaaaattaagacataagaatttaaagtataattttttgtgttttctttgaaaaaagttttataggaagacgtaaaaacaattttcat 43667395  T
Q  140 tggctattggttatgg 155  Q
    |||| |||||||||||    
T  43667396 tggccattggttatgg 43667411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 45226306 - 45226191
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||||||||||||| ||||| ||||||| |||| | | ||||||||| ||||||||||||||||||| |||||||||||||||||    
T  45226306 tcacacttattaagaaaactaaaacataataatttagagtatagttttatgtattttctttgaaaaaagttttataggaagacgtaaaaacaattttcat 45226207  T
Q  140 tggctattggttatgg 155  Q
    || |||||||||||||    
T  45226206 tgactattggttatgg 45226191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 51 - 154
Target Start/End: Original strand, 3861699 - 3861802
Alignment:
Q  51 aagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggt 150  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||| ||| ||||||||| | ||||||||||||||||||||||||||||||| |    
T  3861699 aagaaaactaaaacataataatttgaagtataattttttatgttttctttagaataagttttattgaaagatgtaaaaacaattttcattggctattgat 3861798  T
Q  151 tatg 154  Q
    ||||    
T  3861799 tatg 3861802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 13136547 - 13136661
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||  |||||   ||||||||||||||||||||||||| |||    
T  13136547 tcacacttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttcttt-aaaaaaaaattataggaagatgtaaaaacaatttccat 13136645  T
Q  140 tggctattggttatgg 155  Q
    ||||||||||||||||    
T  13136646 tggctattggttatgg 13136661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 32983165 - 32983278
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||||||||||||| |||| | |||||| |||||| |||||||||||| |||||||||||| |||||||||||||||||||||||    
T  32983165 tcacacttattaagaaaactaaaacataaaaattggaagtatagttttttgtgttttctttgg-aaaagttttataagaagatgtaaaaacaattttcat 32983263  T
Q  140 tggctattggttatgg 155  Q
    |||| |||||||||||    
T  32983264 tggc-attggttatgg 32983278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 44148829 - 44148944
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||| |||||||||| |||||||||||| || ||| |||||| |||||||||||||| |||||| || ||||||||||||||||||||||||    
T  44148829 tcacacttattacgaaaactaaagcataagaatttgtagcatagttttttgtgttttctttggaataagtttcatgggaagatgtaaaaacaattttcat 44148928  T
Q  140 tggctattggttatgg 155  Q
    |||| |||||||||||    
T  44148929 tggcaattggttatgg 44148944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 40718846 - 40718736
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||| ||||||||||| |||| ||||||||||||| |||||| ||||||||||| ||||||||||||| |||| |||| |||||||||||||    
T  40718846 tcacacttattacgaaaactaaaatataaaaatttggagtatagttttttgtgttttctttgaaaaaagttttatatgaagttgtagaaacaattttcat 40718747  T
Q  140 tggctattggt 150  Q
    |||||||||||    
T  40718746 tggctattggt 40718736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 3076463 - 3076348
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||| |||| |||||||||||| || ||| |||||| |||||| ||||||| ||||||||| |||||||||||||| |||||||||    
T  3076463 tcacacttattaagaaaattaaagcataagaatttgtagcatagttttttgtgttttatttggaataagttttatgggaagatgtaaaaataattttcat 3076364  T
Q  140 tggctattggttatgg 155  Q
    |||| |||||||||||    
T  3076363 tggcaattggttatgg 3076348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 40 - 153
Target Start/End: Complemental strand, 33431727 - 33431614
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||||| | |||||||||||| || ||| |||||| |||||| |||  |||||||||||||||| |||| |||||||||||||||    
T  33431727 tcacacttattaagaaaactagatcataagaatttgtagcatagttttttgtgtttttttttaaaaaagttttataggaggatggaaaaacaattttcat 33431628  T
Q  140 tggctattggttat 153  Q
    ||||||||||||||    
T  33431627 tggctattggttat 33431614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 46 - 151
Target Start/End: Complemental strand, 46543144 - 46543039
Alignment:
Q  46 ttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggcta 145  Q
    ||||||| ||||||||||||||| ||||||||||||| |||||| ||||||||||| |||||  |||||||||||||| ||||||||||| |||||||||    
T  46543144 ttattaaaaaaactaaaacataaaaatttggagtatagttttttgtgttttctttgaaaaaaaatttataggaagatgaaaaaacaatttccattggcta 46543045  T
Q  146 ttggtt 151  Q
    ||||||    
T  46543044 ttggtt 46543039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 42 - 155
Target Start/End: Original strand, 46818497 - 46818610
Alignment:
Q  42 acacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattg 141  Q
    ||||||||||||||||  |||||||||||||||  |||||| |||||| | ||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  46818497 acacttattaagaaaagaaaaacataagaatttaaagtatagttttttgtattttctttgaaaaaagttttataggaagatataaaaacaattttcattg 46818596  T
Q  142 gctattggttatgg 155  Q
    |||| | |||||||    
T  46818597 gctaatagttatgg 46818610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 24728619 - 24728735
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataatttttta-tgttttctttggaaaaagttttataggaagatgtaaaaacaattttca 138  Q
    |||||||||||||||||||||||||||||||||||| || ||| ||||||  |||||||||| ||| |||||| || |||||||||||||||||||||||    
T  24728619 tcacacttattaagaaaactaaaacataagaatttgtagcatagtttttttgtgttttctttcgaataagtttcatgggaagatgtaaaaacaattttca 24728718  T
Q  139 ttggctattggttatgg 155  Q
    ||||| |||| ||||||    
T  24728719 ttggcaattgattatgg 24728735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 30221893 - 30221778
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||| |||||||||| ||||||||||||| ||||| ||||||||||| ||||||||||  || ||||||||| |||||||||||||||| |||| ||    
T  30221893 tcacactaattaagaaaattaaaacataagaacttggaatataattttttgtgttttctttaaaataagttttatgggaagatgtaaaaacattttttat 30221794  T
Q  140 tggctattggttatgg 155  Q
    ||| ||||||||||||    
T  30221793 tggatattggttatgg 30221778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 41 - 155
Target Start/End: Original strand, 47014487 - 47014599
Alignment:
Q  41 cacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcatt 140  Q
    |||||||| |||| |||||||||||||||||| |||||||   |||||| ||||||| ||| ||||||||||||||||| ||||||||||||||||||||    
T  47014487 cacacttactaagtaaactaaaacataagaatctggagtag--ttttttgtgttttcgttgaaaaaagttttataggaaaatgtaaaaacaattttcatt 47014584  T
Q  141 ggctattggttatgg 155  Q
    | |||||||||||||    
T  47014585 gactattggttatgg 47014599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 51 - 155
Target Start/End: Original strand, 39932576 - 39932680
Alignment:
Q  51 aagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggt 150  Q
    |||||||||||||||||||||||||||||||| |||||| |||||| |||  || |||||||||| |||||| ||||||||||||| |||||||||||||    
T  39932576 aagaaaactaaaacataagaatttggagtatagttttttgtgttttttttttaataagttttataagaagatataaaaacaatttttattggctattggt 39932675  T
Q  151 tatgg 155  Q
     ||||    
T  39932676 catgg 39932680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 40 - 146
Target Start/End: Original strand, 3875012 - 3875116
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||| ||||||||||||||||| |||||| |||| |  ||||| ||| |||||||||||||||||| |||||||||||||||| ||    
T  3875012 tcacacttattaagaaaagtaaaacataagaatttgaagtatagttttgt--gtttttttttgaaaaagttttataggaatatgtaaaaacaatttttat 3875109  T
Q  140 tggctat 146  Q
    |||||||    
T  3875110 tggctat 3875116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 45 - 154
Target Start/End: Complemental strand, 1820578 - 1820469
Alignment:
Q  45 cttattaagaaaactaaaacataagaatttggagtataatttt-ttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggc 143  Q
    ||||||||||||||||||||||||||||||||| |||| |||| || || ||| |||||||||||||||||||||||||||||||| ||| |||||| ||    
T  1820578 cttattaagaaaactaaaacataagaatttggaatatagttttattgtgctttttttggaaaaagttttataggaagatgtaaaaa-aatattcattagc 1820480  T
Q  144 tattggttatg 154  Q
    | |||||||||    
T  1820479 ttttggttatg 1820469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 28120748 - 28120863
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||| |||||||||||||||| | |||||||| ||||||||| |||||| |||||| |||  ||  | |||||| ||||||||||||||||||||||||    
T  28120748 tcacatttattaagaaaactaagaaataagaatgtggagtatagttttttgtgttttttttaaaatgaattttatgggaagatgtaaaaacaattttcat 28120847  T
Q  140 tggctattggttatgg 155  Q
    ||||||||| ||||||    
T  28120848 tggctattgattatgg 28120863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 40 - 152
Target Start/End: Complemental strand, 1035023 - 1034913
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||| |||||||||||| |||||||||||||||||| ||||  | |||| |||||||||||||| |||||||||  |||||| ||||||||||||||||    
T  1035023 tcacatttattaagaaaattaaaacataagaatttggcgtat--tgttttgtgttttctttggaataagttttatgagaagatataaaaacaattttcat 1034926  T
Q  140 tggctattggtta 152  Q
     | ||||||||||    
T  1034925 cgactattggtta 1034913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 32318553 - 32318668
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaa-aagttttataggaagatgtaaaaacaattttca 138  Q
    ||||| ||||||| |||| ||||| |||| |||||||||||||||||||| | |||| |||  ||| ||||||||| |||||||||||||||||||||||    
T  32318553 tcacaattattaa-aaaattaaaatataaaaatttggagtataattttttcttttttgtttttaaataagttttattggaagatgtaaaaacaattttca 32318651  T
Q  139 ttggctattggttatgg 155  Q
    |||| ||||||||||||    
T  32318652 ttggttattggttatgg 32318668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 40 - 140
Target Start/End: Original strand, 32742195 - 32742295
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||| ||||||||| ||||||||||| ||||||| |||||| ||||||||||  |||||||||||||  || || ||||||||||||||||    
T  32742195 tcacacttattaaaaaaactaaagcataagaattttgagtatagttttttgtgttttctttaaaaaaagttttataaaaaaatataaaaacaattttcat 32742294  T
Q  140 t 140  Q
    |    
T  32742295 t 32742295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 41 - 115
Target Start/End: Complemental strand, 4672998 - 4672924
Alignment:
Q  41 cacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttata 115  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||| | ||||||||| |||||||||||||    
T  4672998 cacacttattaagaaaactaaaatataagaatttggagtatagttttttgtattttctttgaaaaaagttttata 4672924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 41 - 154
Target Start/End: Original strand, 47600030 - 47600146
Alignment:
Q  41 cacacttattaagaaaactaaaacataagaatttggagtataattttttatgttt--tctttggaaaa-agttttataggaagatgtaaaaacaattttc 137  Q
    |||| ||||||| |||| |||||||||||||||| ||||||| |||||| ||| |  ||||   |||| |||||||||||||||||||||||||||||||    
T  47600030 cacatttattaaaaaaattaaaacataagaatttagagtatagttttttttgtgtaatcttaaaaaaaaagttttataggaagatgtaaaaacaattttc 47600129  T
Q  138 attggctattggttatg 154  Q
    ||||||||||| |||||    
T  47600130 attggctattgtttatg 47600146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 59 - 147
Target Start/End: Original strand, 2246026 - 2246114
Alignment:
Q  59 taaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctatt 147  Q
    |||||||| | ||||| ||||||| |||||| ||||||||||| || |||||||||||||| ||||||||| |||||||||||||||||    
T  2246026 taaaacattaaaatttagagtatagttttttgtgttttctttgaaataagttttataggaatatgtaaaaagaattttcattggctatt 2246114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 59 - 155
Target Start/End: Original strand, 37735395 - 37735491
Alignment:
Q  59 taaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 155  Q
    |||||||||||||| || |||||| |||||| | |||||||||||| |||||| || |||||| |||||||||||||| ||||||||||| ||||||    
T  37735395 taaaacataagaatctgaagtatagttttttgtattttctttggaataagtttcatgggaagaagtaaaaacaatttttattggctattgattatgg 37735491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 65 - 155
Target Start/End: Complemental strand, 25391824 - 25391735
Alignment:
Q  65 ataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 155  Q
    ||||||||||| ||||||||||||| |||||||||| || || |||||||| ||| ||||||||||||||||||||||||| | |||||||    
T  25391824 ataagaatttgaagtataattttttgtgttttctttagataa-gttttatatgaaaatgtaaaaacaattttcattggctaatagttatgg 25391735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 40 - 142
Target Start/End: Original strand, 30701378 - 30701480
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||| ||||||||||||||  | |||| |  |||||||||| |||| |||||| || ||||||||||||||||||| |||| |||||||||    
T  30701378 tcacacttattaaaaaaactaaaacatagtagtttgtaacataattttttgtgttatctttgaaataagttttataggaagatgtgaaaataattttcat 30701477  T
Q  140 tgg 142  Q
    |||    
T  30701478 tgg 30701480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 49 - 154
Target Start/End: Original strand, 47302910 - 47303012
Alignment:
Q  49 ttaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattg 148  Q
    ||||||||||||||| ||||||| |||||||||||  |||| |||||| || |||| |||||| |||||||||||| |||| ||||||||||||||||||    
T  47302910 ttaagaaaactaaaatataagaaattggagtataa--ttttgtgtttttttaggaataagtttcataggaagatgt-aaaataattttcattggctattg 47303006  T
Q  149 gttatg 154  Q
     |||||    
T  47303007 attatg 47303012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 40 - 153
Target Start/End: Complemental strand, 16688304 - 16688191
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||  |||| |||||||||  | |||| |  ||| ||||||||||| | |||| || ||||||||||||||||||||||||||||||||||    
T  16688304 tcacacttattagaaaaattaaaacatagtagtttgtaacatagttttttatgttatttttgaaataagttttataggaagatgtaaaaacaattttcat 16688205  T
Q  140 tggctattggttat 153  Q
    ||| | ||||||||    
T  16688204 tggttgttggttat 16688191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 91 - 155
Target Start/End: Original strand, 10558800 - 10558864
Alignment:
Q  91 tgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 155  Q
    |||||||||||||| || |||||| ||||||||||||||||||||||||||||||||| ||||||    
T  10558800 tgttttctttggaataatttttatgggaagatgtaaaaacaattttcattggctattgattatgg 10558864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 7397874 - 7397772
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||| |||||||||| |||  | |||| |  ||| |||||| |||| |||||| || || |||||||||||||||||||||||||||||||    
T  7397874 tcacacttattaaaaaaactaaaatatagtagtttgtaacatagttttttgtgttatctttgaaataaattttataggaagatgtaaaaacaattttcat 7397775  T
Q  140 tgg 142  Q
    |||    
T  7397774 tgg 7397772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 84 - 154
Target Start/End: Complemental strand, 43765418 - 43765348
Alignment:
Q  84 ttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatg 154  Q
    |||||| |||||||||| ||| |||||||||||||||||||||||||| |||||||||| |||| ||||||    
T  43765418 ttttttgtgttttctttagaataagttttataggaagatgtaaaaacatttttcattggttatttgttatg 43765348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 40 - 142
Target Start/End: Original strand, 45840059 - 45840160
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||||||||||||| | |||| |  ||| |||||| |||| | |||| || | |||||||||||||||| |||||||||||||||    
T  45840059 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatttttgaaatatgttttataggaagatg-aaaaacaattttcat 45840157  T
Q  140 tgg 142  Q
    |||    
T  45840158 tgg 45840160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 50176690 - 50176588
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||| ||||||||||||||||||||||  | |||| |  ||| |||||| |||| |||||| || || |||||||||||||||||||||||||||| ||    
T  50176690 tcacatttattaagaaaactaaaacatagtagtttgtaacatagttttttgtgttatctttgaaataaattttataggaagatgtaaaaacaatttttat 50176591  T
Q  140 tgg 142  Q
    |||    
T  50176590 tgg 50176588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 98 - 154
Target Start/End: Complemental strand, 50370071 - 50370015
Alignment:
Q  98 tttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatg 154  Q
    |||| |||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  50370071 tttgaaaaaagttttataggaagatgtaaaaacaatttctattggctattggttatg 50370015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 106 - 153
Target Start/End: Original strand, 5858430 - 5858477
Alignment:
Q  106 aagttttataggaagatgtaaaaacaattttcattggctattggttat 153  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  5858430 aagttttataggaagatataaaaacaattttcattggctattggttat 5858477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 42 - 153
Target Start/End: Original strand, 35366198 - 35366309
Alignment:
Q  42 acacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattg 141  Q
    ||||||||||||||||||||||||||  | |||| |  ||| ||| || |||| || ||| || || |||||||| ||||||||||||||||||| ||||    
T  35366198 acacttattaagaaaactaaaacatagtagtttgcaacatagtttcttgtgttatcgttgaaataaattttatagaaagatgtaaaaacaattttaattg 35366297  T
Q  142 gctattggttat 153  Q
    | ||||||||||    
T  35366298 gttattggttat 35366309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 153
Target Start/End: Complemental strand, 5950610 - 5950494
Alignment:
Q  40 tcacacttattaagaaaactaaaacataag---aatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaatttt 136  Q
    ||||||||||||||||||||||||||||     | |||| |  ||| ||| || |||| || ||| || |||||||||||||||||||||||||||||||    
T  5950610 tcacacttattaagaaaactaaaacatactcgtagtttgcaacatagtttcttgtgttatccttgaaataagttttataggaagatgtaaaaacaatttt 5950511  T
Q  137 cattggctattggttat 153  Q
    ||||||  |||||||||    
T  5950510 cattggtcattggttat 5950494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 142
Target Start/End: Original strand, 23873823 - 23873925
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| || ||   |||||  |||||||||||| |||| || |||||| |||||| || | |||||||||||| |||||||||    
T  23873823 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattttcat 23873922  T
Q  140 tgg 142  Q
    |||    
T  23873923 tgg 23873925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 142
Target Start/End: Original strand, 38942437 - 38942539
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| || ||   |||||  |||||||||||| |||| || |||||| |||||| || | |||||||||||| |||||||||    
T  38942437 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattttcat 38942536  T
Q  140 tgg 142  Q
    |||    
T  38942537 tgg 38942539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 98 - 155
Target Start/End: Complemental strand, 16854250 - 16854193
Alignment:
Q  98 tttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 155  Q
    |||| |||||||||||| ||||| ||||||||||||||| ||||||||||||||||||    
T  16854250 tttgaaaaaagttttattggaaggtgtaaaaacaatttttattggctattggttatgg 16854193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 40 - 153
Target Start/End: Complemental strand, 37538977 - 37538864
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||| ||||| |||  | |||| |  ||| ||| || |||| || ||| || |||||||||||||||||||||| |||||||||||    
T  37538977 tcacacttattaagaaaattaaaatatagtagtttgcaacatagtttcttgtgttatccttgaaataagttttataggaagatgtaaagacaattttcat 37538878  T
Q  140 tggctattggttat 153  Q
    ||| | ||||||||    
T  37538877 tggttgttggttat 37538864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 155
Target Start/End: Original strand, 6787050 - 6787098
Alignment:
Q  107 agttttataggaagatgtaaaaacaattttcattggctattggttatgg 155  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  6787050 agttttataggaagatgtaaaaataatttttattggctattggttatgg 6787098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 103 - 142
Target Start/End: Complemental strand, 13351785 - 13351746
Alignment:
Q  103 aaaaagttttataggaagatgtaaaaacaattttcattgg 142  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  13351785 aaaaagttttataggaagatgtaaaaacaattttcattgg 13351746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 92 - 155
Target Start/End: Original strand, 23392211 - 23392274
Alignment:
Q  92 gttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 155  Q
    ||||||||||||| ||||||||||| || || |||||| ||||||||||| |||||||||||||    
T  23392211 gttttctttggaataagttttatagaaaaatataaaaataattttcattgactattggttatgg 23392274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 44 - 142
Target Start/End: Original strand, 25185300 - 25185399
Alignment:
Q  44 acttattaagaaaactaaaacataagaatttggagtataatttttta-tgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 142  Q
    ||||||||||||||||||||||||  | |||| |  ||| ||||||  |||| |||||| || ||||||||||||||||||| ||||||| |||||||||    
T  25185300 acttattaagaaaactaaaacatagtagtttgtaacatagtttttttgtgttatctttgaaataagttttataggaagatgtgaaaacaactttcattgg 25185399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 7875933 - 7876050
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttgga--aaaagttttataggaagatgtaaaaacaattttc 137  Q
    |||||||||||||||||| ||||| |||| |||||| | |||| |||||| ||||||||||| |       |||||||| |||||||||||| ||||||     
T  7875933 tcacacttattaagaaaattaaaatataaaaatttgaattatagttttttgtgttttctttgaatttttttttttatagaaagatgtaaaaataattttt 7876032  T
Q  138 attggctattggttatgg 155  Q
    |||| |||||||||||||    
T  7876033 attgactattggttatgg 7876050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 8889756 - 8889798
Alignment:
Q  106 aagttttataggaagatgtaaaaacaattttcattggctattg 148  Q
    ||||||||||||||||||||||||||||||||||||| |||||    
T  8889756 aagttttataggaagatgtaaaaacaattttcattggttattg 8889798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 134
Target Start/End: Original strand, 26907087 - 26907181
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaatt 134  Q
    |||||||||||||||||||||| || |||  |||||  |||||||||||| |||| || |||||| |||||| || | |||||||||||| ||||    
T  26907087 tcacacttattaagaaaactaatacttaatgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataatt 26907181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 142
Target Start/End: Original strand, 28916511 - 28916613
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| || ||   |||||  |||||||||||| |||| |  |||||| |||||| || | |||||||||||| |||||||||    
T  28916511 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttcttcttggaataagtttcatggaaagatgtaaaaataattttcat 28916610  T
Q  140 tgg 142  Q
    |||    
T  28916611 tgg 28916613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 142
Target Start/End: Original strand, 43656033 - 43656135
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| || ||   |||||  |||||||||||| |||| || ||| || |||||| || | |||||||||||| |||||||||    
T  43656033 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttgaaataagtttcatggaaagatgtaaaaataattttcat 43656132  T
Q  140 tgg 142  Q
    |||    
T  43656133 tgg 43656135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 11241073 - 11241036
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||||||||||||||||||||||||||||    
T  11241073 ttgaatgtaatttacatttaattttatgagaataaaca 11241036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 141
Target Start/End: Complemental strand, 35942005 - 35941904
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| || |||  |||||  |||||||||||| || | || ||| || ||||||||| | ||||||||| || |||||||||    
T  35942005 tcacacttattaagaaaactaacacttaattatttgaggtataattttttgtgctctccttgaaataagttttatggaaagatgtaataataattttcat 35941906  T
Q  140 tg 141  Q
    ||    
T  35941905 tg 35941904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 145
Target Start/End: Complemental strand, 36384092 - 36383987
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||  |||||||| | ||||||   ||||||||||| |||| | ||||||| || ||| || | ||||| ||||||||||| ||||    
T  36384092 tcacacttattaagaaagttaaaacattataatttgagatataattttttgtgttatttttggaataaatttcatggaaagatataaaaacaattatcat 36383993  T
Q  140 tggcta 145  Q
    ||||||    
T  36383992 tggcta 36383987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 43667432 - 43667469
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||||||||||||||||||||||||||||    
T  43667432 ttgaatgtaatttacatttaattttatgagaataaaca 43667469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 153
Target Start/End: Original strand, 52841438 - 52841551
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||| |||||||||||||||||||| || | |||| |||||| ||| || | || || ||  || |||||| |||| ||||||| ||||||||||||||    
T  52841438 tcacatttattaagaaaactaaaacacaatagtttgtagtatagtttcttgtcttatccttaaaataagtttcatagaaagatgttaaaacaattttcat 52841537  T
Q  140 tggctattggttat 153  Q
    ||| |||| |||||    
T  52841538 tggttattagttat 52841551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 155
Target Start/End: Original strand, 298667 - 298777
Alignment:
Q  46 ttattaagaaaactaaaacataaga--atttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggc 143  Q
    ||||||||||||||||||||||| |  | ||| |||||| |||  | |||||||||| ||| |||||| || ||||||||||||||  ||||| ||||||    
T  298667 ttattaagaaaactaaaacataaaataacttgaagtatagtttgatgtgttttctttagaataagttt-atgggaagatgtaaaaattattttaattggc 298765  T
Q  144 tattggttatgg 155  Q
    ||||| ||||||    
T  298766 tattgattatgg 298777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 141
Target Start/End: Complemental strand, 15912300 - 15912265
Alignment:
Q  106 aagttttataggaagatgtaaaaacaattttcattg 141  Q
    ||||||||||||||||||||||||||||||||||||    
T  15912300 aagttttataggaagatgtaaaaacaattttcattg 15912265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 15285967 - 15285865
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| || ||   ||||| ||||||||||||| |||| || ||| || |||||| || | || ||||||||| |||| ||||    
T  15285967 tcacacttattaagaaaactaacacttagtgatttgaagtataattttttgtgttctccttgaaataagtttcatggaaatatgtaaaaataattctcat 15285868  T
Q  140 tgg 142  Q
    |||    
T  15285867 tgg 15285865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 25990912 - 25990810
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||| |||||||||||||||| || ||   |||||  |||||||||||| |||| || |||||| |||||| || | || ||||||||| |||||||||    
T  25990912 tcacatttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatggaaatatgtaaaaataattttcat 25990813  T
Q  140 tgg 142  Q
    |||    
T  25990812 tgg 25990810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 35884375 - 35884273
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||| ||||||||||||||||  | ||  ||||||  |||||||||||| |||| | |||| || || |||||| | |||||||||||| |||||||||    
T  35884375 tcacatttattaagaaaactaactcttagtaatttgaggtataattttttgtgttctttttgaaataaattttatggaaagatgtaaaaataattttcat 35884276  T
Q  140 tgg 142  Q
    |||    
T  35884275 tgg 35884273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 46949485 - 46949383
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||| |||||||||||||||| || ||   |||||   ||||||||||| |||| || |||||| |||||| || | |||||||||||| |||||||||    
T  46949485 tcacatttattaagaaaactaacacttagtgatttgagatataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattttcat 46949386  T
Q  140 tgg 142  Q
    |||    
T  46949385 tgg 46949383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 1820445 - 1820408
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  1820445 ttgaatgtaatttgcatttaattttatgagaataaaca 1820408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 7468094 - 7468131
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  7468094 ttgaatgtaatttgcatttaattttatgagaataaaca 7468131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 12449098 - 12449135
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  12449098 ttgaatgtaatttgcatttaattttatgagaataaaca 12449135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 15959771 - 15959808
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  15959771 ttgaatgtaatttgcatttaattttatgagaataaaca 15959808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 25391714 - 25391677
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  25391714 ttgaatgtaatttgcatttaattttatgagaataaaca 25391677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 32624136 - 32624173
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  32624136 ttgaatgtaatttgcatttaattttatgagaataaaca 32624173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 33369583 - 33369546
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  33369583 ttgaatgtaatttgcatttaattttatgagaataaaca 33369546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 39555717 - 39555754
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  39555717 ttgaatgtaatttgcatttaattttatgagaataaaca 39555754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 40718708 - 40718671
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  40718708 ttgaatgtaatttgcatttaattttatgagaataaaca 40718671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 141
Target Start/End: Original strand, 44510212 - 44510313
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||| ||||||||||||||| |||  | |||  |  ||| |||||| |||| | |||| || || |||||||||||| ||||||||||||||||||    
T  44510212 tcacacttcttaagaaaactaaaatatagtagtttataacatagttttttgtgttatttttgaaataaattttataggaagttgtaaaaacaattttcat 44510311  T
Q  140 tg 141  Q
    ||    
T  44510312 tg 44510313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 45226168 - 45226131
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  45226168 ttgaatgtaatttgcatttaattttatgagaataaaca 45226131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 136
Target Start/End: Original strand, 46803667 - 46803760
Alignment:
Q  43 cacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaatttt 136  Q
    |||||||||||||||| ||||||||  | |||| |  ||| |||||| |||| || ||| || |||||| |||| |||||||||||||||||||    
T  46803667 cacttattaagaaaaccaaaacatagtagtttgcaacatagttttttgtgttatccttgcaataagtttcatagaaagatgtaaaaacaatttt 46803760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 47600170 - 47600207
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  47600170 ttgaatgtaatttgcatttaattttatgagaataaaca 47600207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 153
Target Start/End: Original strand, 51338891 - 51339003
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||| ||||||||||| |||||| ||   |||||| ||||| | || || |||| |||||| || |||||| |||| ||||||||||| ||||||||||    
T  51338891 tcacatttattaagaaa-ctaaaatattgtaatttgtagtatgacttcttgtgttgtctttgaaataagtttcatagaaagatgtaaaatcaattttcat 51338989  T
Q  140 tggctattggttat 153  Q
    ||| |||| |||||    
T  51338990 tggttattagttat 51339003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 153
Target Start/End: Original strand, 51840489 - 51840601
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||| |||||| ||   | |||| ||||| | || || |||| ||||||||| |||||| |||| ||||| ||||| ||||||||||    
T  51840489 tcacacttattaagaaa-ctaaaatattgtagtttgtagtatgacttcttgtgttatctttggaataagtttcatagaaagatataaaatcaattttcat 51840587  T
Q  140 tggctattggttat 153  Q
    ||| |||| |||||    
T  51840588 tggttattagttat 51840601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 40220223 - 40220118
Alignment:
Q  40 tcacacttattaagaaaactaaaacataaga---atttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaatttt 136  Q
    |||||||||||||||||||||| || ||  |   |||||  |||||||||||| |||| || |||||| |||||| || | |||||||||||| |||| |    
T  40220223 tcacacttattaagaaaactaacacttagtagtgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattct 40220124  T
Q  137 cattgg 142  Q
    ||||||    
T  40220123 cattgg 40220118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Original strand, 2246148 - 2246182
Alignment:
Q  181 aatgtaatttacatttaattttatgagaataaaca 215  Q
    |||||||||| ||||||||||||||||||||||||    
T  2246148 aatgtaatttgcatttaattttatgagaataaaca 2246182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 75
Target Start/End: Original strand, 6304791 - 6304825
Alignment:
Q  41 cacacttattaagaaaactaaaacataagaatttg 75  Q
    |||||||||||||||||||||||||||| ||||||    
T  6304791 cacacttattaagaaaactaaaacataataatttg 6304825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 15311341 - 15311239
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| || |||  |||||  |||||||||||| | || || |||||| |||||| || | ||||  |||||| |||| ||||    
T  15311341 tcacacttattaagaaaactaatacttaatgatttgaggtataattttttgtattctccttggaataagtttcatggaaagaaataaaaataattctcat 15311242  T
Q  140 tgg 142  Q
    |||    
T  15311241 tgg 15311239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 142
Target Start/End: Complemental strand, 18036704 - 18036606
Alignment:
Q  44 acttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 142  Q
    |||||||||||||||||| || |||  |||||  |||||||||||| |||| |  |||||| |||||| ||   |||||||||||| |||| |||||||    
T  18036704 acttattaagaaaactaacacttaatgatttgaggtataattttttgtgttcttcttggaataagtttcatgaaaagatgtaaaaataattctcattgg 18036606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 35691422 - 35691388
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataa 212  Q
    ||||||||||||| |||||||||||||||||||||    
T  35691422 ttgaatgtaatttgcatttaattttatgagaataa 35691388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 142
Target Start/End: Original strand, 40935609 - 40935711
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||| |||||||||||||||| || ||   |||||  |||| ||||||| |||| || |||||| |||||| || | |||||||||||| |||| ||||    
T  40935609 tcacatttattaagaaaactaacacttagtgatttgaggtatgattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattctcat 40935708  T
Q  140 tgg 142  Q
    |||    
T  40935709 tgg 40935711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 153
Target Start/End: Complemental strand, 41063910 - 41063796
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaag-ttttataggaagatgtaaaaacaattttca 138  Q
    ||||||||||||||||||| ||||||||  | |||| |  ||| |||||| |||| |  ||  || ||| |||||||| |||||||||||| ||||||||    
T  41063910 tcacacttattaagaaaaccaaaacatagtagtttgcaacatagttttttgtgttattcttaaaataagcttttatagaaagatgtaaaaataattttca 41063811  T
Q  139 ttggctattggttat 153  Q
    |||| |||| |||||    
T  41063810 ttggttatttgttat 41063796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #101
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 49924583 - 49924481
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| || ||   |||||  |||||||||||| |||| |  ||| || |||||| || | |||||||||||| |||| ||||    
T  49924583 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttcttcttgaaataagtttcatggaaagatgtaaaaataattctcat 49924484  T
Q  140 tgg 142  Q
    |||    
T  49924483 tgg 49924481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #102
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 3875152 - 3875189
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||| ||||| ||||||||||||||||||||||||    
T  3875152 ttgaatgaaatttgcatttaattttatgagaataaaca 3875189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #103
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 6785486 - 6785449
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||| ||| ||||||||||||||||||||||||    
T  6785486 ttgaatgtagtttgcatttaattttatgagaataaaca 6785449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #104
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 6786868 - 6786831
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||| ||| ||||||||||||||||||||||||    
T  6786868 ttgaatgtagtttgcatttaattttatgagaataaaca 6786831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #105
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 28016875 - 28016912
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    |||||||||| || ||||||||||||||||||||||||    
T  28016875 ttgaatgtaacttgcatttaattttatgagaataaaca 28016912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #106
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 28120886 - 28120923
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| |||||||||||||| |||||||||    
T  28120886 ttgaatgtaatttgcatttaattttatgtgaataaaca 28120923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #107
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 32983301 - 32983338
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    |||||| |||||| ||||||||||||||||||||||||    
T  32983301 ttgaatataatttgcatttaattttatgagaataaaca 32983338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #108
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 39932703 - 39932740
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    |||||||||||||  |||||||||||||||||||||||    
T  39932703 ttgaatgtaatttgtatttaattttatgagaataaaca 39932740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #109
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 42965945 - 42965982
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| ||||||||||||| ||||||||||    
T  42965945 ttgaatgtaatttgcatttaattttataagaataaaca 42965982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #110
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 47014622 - 47014658
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  47014622 ttgaatgta-tttacatttaattttatgagaataaaca 47014658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #111
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 50012621 - 50012584
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| ||||||||||||| ||||||||||    
T  50012621 ttgaatgtaatttgcatttaattttataagaataaaca 50012584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #112
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 50012747 - 50012687
Alignment:
Q  40 tcacacttattaagaaaact-aaaacataagaatttggagtataattttttatgttttctt 99  Q
    ||||||||||||| |||| | |||| ||| |||||||||||||| |||||| |||||||||    
T  50012747 tcacacttattaaaaaaaattaaaatataggaatttggagtatagttttttgtgttttctt 50012687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 99; Significance: 5e-49; HSPs: 109)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 40 - 154
Target Start/End: Original strand, 46711610 - 46711724
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  46711610 tcacacttattaagaaaacgaaaacataagaatttggagtataattttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaatattcat 46711709  T
Q  140 tggctattggttatg 154  Q
    |||||||||||||||    
T  46711710 tggctattggttatg 46711724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 14752160 - 14752275
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||    
T  14752160 tcacacttatttagaaaactaaaacataagaatttggagtataattttttgtgttttctttggaaaaaaatttataggaagatgtaaaaacaattttcat 14752259  T
Q  140 tggctattggttatgg 155  Q
    || |||||||||||||    
T  14752260 tgactattggttatgg 14752275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 30189743 - 30189628
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||| |||| |||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  30189743 tcacacttattaaaaaaattaaaacataagaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 30189644  T
Q  140 tggctattggttatgg 155  Q
    ||||||||||||||||    
T  30189643 tggctattggttatgg 30189628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 37042369 - 37042484
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  37042369 tcacacttattaagaaaactaaaacataaaaatttggagtatagttttttgtgttttcgttggaaaaagttttataggaagatgtaaaaacaattttcat 37042468  T
Q  140 tggctattggttatgg 155  Q
    ||||||||| ||||||    
T  37042469 tggctattgattatgg 37042484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 44 - 153
Target Start/End: Complemental strand, 37075128 - 37075019
Alignment:
Q  44 acttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggc 143  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  37075128 acttattaaaaaaactaaaacataagaatttgaagtataattttttgtgttttctttggaaaaagttttataggaagatgtaaacacaattttcattggc 37075029  T
Q  144 tattggttat 153  Q
    ||||||||||    
T  37075028 tattggttat 37075019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 35963324 - 35963209
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||| |||||||||||| ||    
T  35963324 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttgtttggaaaaagttttataggaagatggaaaaacaatttttat 35963225  T
Q  140 tggctattggttatgg 155  Q
    ||| ||||||||||||    
T  35963224 tggttattggttatgg 35963209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 50650989 - 50651104
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||||||||||||||||| | |||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  50650989 tcacacttattaagaaaactaaaacataagaatttgaaatatagttttttgtgttttctttgcaaaaagttttataggaagatgtaaaaacaattttcat 50651088  T
Q  140 tggctattggttatgg 155  Q
    || |||||||||||||    
T  50651089 tgactattggttatgg 50651104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 44 - 155
Target Start/End: Original strand, 11054267 - 11054379
Alignment:
Q  44 acttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttgg-aaaaagttttataggaagatgtaaaaacaattttcattgg 142  Q
    |||||||||||||||||||| |||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  11054267 acttattaagaaaactaaaatataagaatttggagtatagttttttgtgttttctttggaaaaaagttttataggaagatttaaaaacaattttcattgg 11054366  T
Q  143 ctattggttatgg 155  Q
    |||||||||||||    
T  11054367 ctattggttatgg 11054379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 7866435 - 7866550
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||| | ||||||||| ||||||||||||| |||||||||||||||||||||||    
T  7866435 tcacacttattaagaaaactaaaacataagaatttagagtatagttttttttattttctttgaaaaaagttttataagaagatgtaaaaacaattttcat 7866534  T
Q  140 tggctattggttatgg 155  Q
    || |||||||||||||    
T  7866535 tgactattggttatgg 7866550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 23910465 - 23910580
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||| |||||||||||||||| |||||||  ||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  23910465 tcacacttattaagaaaattaaaacataagaatttagagtatagctttttgtgttttctttgtaaaaagttttataggaagatgtaaaaataattttcat 23910564  T
Q  140 tggctattggttatgg 155  Q
    ||||||||||||||||    
T  23910565 tggctattggttatgg 23910580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 28875578 - 28875463
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||| ||||||||||||||||| |||||||||||||| |||| || ||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  28875578 tcacatttattaagaaaactaaagcataagaatttggactatagttatttgtgttttctttggaaaaagttttataagaagatgtaaaaacaattttcat 28875479  T
Q  140 tggctattggttatgg 155  Q
    ||||||||||||||||    
T  28875478 tggctattggttatgg 28875463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 40 - 154
Target Start/End: Complemental strand, 6075253 - 6075139
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||| |||||||||||||||||    
T  6075253 tcacacttattaagaaaactaaagtataagaatttggagtataattttttgtgttttctttggaaaaagtgttacaggaagaagtaaaaacaattttcat 6075154  T
Q  140 tggctattggttatg 154  Q
    |||| ||||||||||    
T  6075153 tggccattggttatg 6075139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 40 - 153
Target Start/End: Complemental strand, 9264723 - 9264610
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||||||||| |||||| ||||||| |||||| ||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  9264723 tcacacttattaagaaaactaaaacatatgaattttgagtatagttttttgtgttttctttgaaaaaagttttatatgaagatgtaaaaacaattttcat 9264624  T
Q  140 tggctattggttat 153  Q
    |||||||| |||||    
T  9264623 tggctattcgttat 9264610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 46 - 155
Target Start/End: Original strand, 23311551 - 23311660
Alignment:
Q  46 ttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggcta 145  Q
    ||||||||||||||||||||||| ||||| ||||||| |||| | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  23311551 ttattaagaaaactaaaacataaaaatttagagtatagttttgtgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcattggcta 23311650  T
Q  146 ttggttatgg 155  Q
    ||||||||||    
T  23311651 ttggttatgg 23311660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 40 - 153
Target Start/End: Complemental strand, 36546714 - 36546601
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||||||||||||| ||||| ||||||| |||||| | ||||||||||||||||||| |||||||||||||||| ||||||||||    
T  36546714 tcacacttattaagaaaactaaaacataaaaatttagagtatagttttttgtattttctttggaaaaagtttcataggaagatgtaaaaccaattttcat 36546615  T
Q  140 tggctattggttat 153  Q
    ||||||||||||||    
T  36546614 tggctattggttat 36546601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 40 - 153
Target Start/End: Original strand, 36561601 - 36561714
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||||||||||||| ||||| ||||||| |||||| | ||||||||||||||||||| |||||||||||||||| ||||||||||    
T  36561601 tcacacttattaagaaaactaaaacataaaaatttagagtatagttttttgtattttctttggaaaaagtttcataggaagatgtaaaaccaattttcat 36561700  T
Q  140 tggctattggttat 153  Q
    ||||||||||||||    
T  36561701 tggctattggttat 36561714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 29235359 - 29235244
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||| | |||||||| ||||| |||| ||||||||||||||||| |||||||||    
T  29235359 tcacacttattaagaaaactaaaacataagaatttagagtatagttttttgtattttctttagaaaacgtttaataggaagatgtaaaaataattttcat 29235260  T
Q  140 tggctattggttatgg 155  Q
    ||||||||||||||||    
T  29235259 tggctattggttatgg 29235244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 40 - 151
Target Start/End: Complemental strand, 31837091 - 31836980
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||| | ||||||||||||||||||||||||||| ||| |||||||||||||||    
T  31837091 tcacacttattaagaaaactaaaacataagaagttggagtatagttttttgtattttctttggaaaaagttttataggaatatgcaaaaacaattttcat 31836992  T
Q  140 tggctattggtt 151  Q
    || |||||||||    
T  31836991 tgactattggtt 31836980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 40 - 154
Target Start/End: Complemental strand, 47864363 - 47864249
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||| ||||||||||||||||||||| ||||||||||||||| ||||||   ||||||||| |||||||||||||||||||||||||||||||||||||    
T  47864363 tcacatttattaagaaaactaaaacatgagaatttggagtatagttttttgcattttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 47864264  T
Q  140 tggctattggttatg 154  Q
    || |||||| |||||    
T  47864263 tgactattgattatg 47864249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 579097 - 579205
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||||||||||||||||||       |||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  579097 tcacacttattaagaaaactaaaacataagaatttgg-------ttttttgtgttttctttgaaaaaagttttataggaagatataaaaacaattttcat 579189  T
Q  140 tggctattggttatgg 155  Q
    ||||||||||||||||    
T  579190 tggctattggttatgg 579205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 44 - 155
Target Start/End: Original strand, 26724947 - 26725058
Alignment:
Q  44 acttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggc 143  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||| ||||||| |  ||||||||||||||||||||||||||     
T  26724947 acttattaagaaaactaaaatataagaatttgaagtataattttttgtgttttctttggaataagttttctgagaagatgtaaaaacaattttcattggt 26725046  T
Q  144 tattggttatgg 155  Q
    ||||| ||||||    
T  26725047 tattgattatgg 26725058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 54464848 - 54464962
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||  |||||   ||||||||||||||||||||||||||| |    
T  54464848 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttcttt-aaaaaaaaattataggaagatgtaaaaacaattttcgt 54464946  T
Q  140 tggctattggttatgg 155  Q
    ||||||||||||||||    
T  54464947 tggctattggttatgg 54464962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 40 - 145
Target Start/End: Original strand, 41476287 - 41476393
Alignment:
Q  40 tcacacttattaagaaaactaaaa-cataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttca 138  Q
    |||||||||||||||||||||||| ||||| ||||||||||||| |||||| ||||||||||| |||||||||||||| |||||||||||| ||||||||    
T  41476287 tcacacttattaagaaaactaaaaacataaaaatttggagtatagttttttgtgttttctttgaaaaaagttttatagaaagatgtaaaaataattttca 41476386  T
Q  139 ttggcta 145  Q
    |||||||    
T  41476387 ttggcta 41476393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 66 - 155
Target Start/End: Complemental strand, 6438229 - 6438140
Alignment:
Q  66 taagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 155  Q
    ||||||||||||||||| |||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  6438229 taagaatttggagtatagttttttgtgttttctttgaaaaaagctttataggaagatgtaaaaacaattttcattggctattggttatgg 6438140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 40 - 154
Target Start/End: Complemental strand, 2927462 - 2927347
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataatttttta-tgttttctttggaaaaagttttataggaagatgtaaaaacaattttca 138  Q
    ||||| |||||||||||||||||||||||||||||| || ||| ||||||  | |||||||||||| ||||||||| |||||||||||||| ||||||||    
T  2927462 tcacatttattaagaaaactaaaacataagaatttgtagcatagtttttttgtattttctttggaataagttttatgggaagatgtaaaaataattttca 2927363  T
Q  139 ttggctattggttatg 154  Q
    ||||||||||||||||    
T  2927362 ttggctattggttatg 2927347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 40 - 147
Target Start/End: Complemental strand, 26208186 - 26208079
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||| | ||||| |||||| || | ||||||||||||||||||||||    
T  26208186 tcacacttattaagaaaactaaaacataagaatttagagtatagttttttgtgttttgtctggaataagtttcatggtaagatgtaaaaacaattttcat 26208087  T
Q  140 tggctatt 147  Q
    ||||||||    
T  26208086 tggctatt 26208079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 46 - 155
Target Start/End: Original strand, 32619787 - 32619897
Alignment:
Q  46 ttattaagaaaactaa-aacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggct 144  Q
    |||||||||||||||  ||||| ||||||||||||||||| |||| |||||||||||||| | |||||||| ||||||||||||| ||||||||||||||    
T  32619787 ttattaagaaaactatgaacatgagaatttggagtataatattttgtgttttctttggaataggttttataagaagatgtaaaaataattttcattggct 32619886  T
Q  145 attggttatgg 155  Q
    |||||||||||    
T  32619887 attggttatgg 32619897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 41 - 155
Target Start/End: Complemental strand, 19464248 - 19464132
Alignment:
Q  41 cacacttattaagaaaactaaaacataagaatttggagtataa--ttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttca 138  Q
    |||||||||||| |||||||||||||||||||||||||||||   |||||| ||||||||||| ||||||||||||||||||||  ||||||||||||||    
T  19464248 cacacttattaacaaaactaaaacataagaatttggagtatatagttttttgtgttttctttgaaaaaagttttataggaagattgaaaaacaattttca 19464149  T
Q  139 ttggctattggttatgg 155  Q
    ||   ||||||||||||    
T  19464148 tttattattggttatgg 19464132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 50730281 - 50730166
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtata-attttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttca 138  Q
    ||||| |||||||||||||||||||||||||||||||||||||  |||||| || |||||||||||||||||||||||||||||||||||| ||   |||    
T  50730281 tcacatttattaagaaaactaaaacataagaatttggagtatagtttttttgtgctttctttggaaaaagttttataggaagatgtaaaaa-aaaaatca 50730183  T
Q  139 ttggctattggttatgg 155  Q
    ||| |||||||||||||    
T  50730182 ttgactattggttatgg 50730166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 50782573 - 50782688
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtata-attttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttca 138  Q
    ||||| |||||||||||||||||||||||||||||||||||||  |||||| || |||||||||||||||||||||||||||||||||||| ||   |||    
T  50782573 tcacatttattaagaaaactaaaacataagaatttggagtatagtttttttgtgctttctttggaaaaagttttataggaagatgtaaaaa-aaaaatca 50782671  T
Q  139 ttggctattggttatgg 155  Q
    ||| |||||||||||||    
T  50782672 ttgactattggttatgg 50782688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 53270406 - 53270292
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||| |||||||||| |||| ||||||||||||||||||| |||||| ||||||||||| ||||||||| |||| |||||| ||||| |||||||||    
T  53270406 tcacactcattaagaaaattaaa-cataagaatttggagtatagttttttgtgttttctttgaaaaaagtttcatagaaagatgaaaaaataattttcat 53270308  T
Q  140 tggctattggttatgg 155  Q
    || |||||||||||||    
T  53270307 tgcctattggttatgg 53270292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 8703277 - 8703165
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||| |||||||||||||||||||||||||||| | ||||| ||| || ||||||||||  ||||||||||||||||||||||| ||||||    
T  8703277 tcacacttattaaaaaaactaaaacataagaatttggagtat-agtttttgtgtgtt-tttggaaaaaaatttataggaagatgtaaaaacaa-tttcat 8703181  T
Q  140 tggctattggttatgg 155  Q
    ||||||||| ||||||    
T  8703180 tggctattgattatgg 8703165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 9055164 - 9055052
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||| |||||||||||||||||||||||||||| | ||||| ||| || ||||||||||  ||||||||||||||||||||||| ||||||    
T  9055164 tcacacttattaaaaaaactaaaacataagaatttggagtat-agtttttgtgtgtt-tttggaaaaaaatttataggaagatgtaaaaacaa-tttcat 9055068  T
Q  140 tggctattggttatgg 155  Q
    ||||||||| ||||||    
T  9055067 tggctattgattatgg 9055052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 10115077 - 10114975
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||||||||||||  | |||| |  |||||||||| | || |||||| || ||||||||||||||||||||||||||||||||||    
T  10115077 tcacacttattaagaaaactaaaacatagtagtttgtaacataattttttgtattatctttgaaataagttttataggaagatgtaaaaacaattttcat 10114978  T
Q  140 tgg 142  Q
    |||    
T  10114977 tgg 10114975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 54 - 155
Target Start/End: Original strand, 20847235 - 20847335
Alignment:
Q  54 aaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttat 153  Q
    |||| ||||||||||||||||||||||||||||||  |||||||||||||| |||||| ||||||||||||  ||||||||||||||||  |||| ||||    
T  20847235 aaaattaaaacataagaatttggagtataatttttg-tgttttctttggaataagtttcataggaagatgtgcaaacaattttcattggtaattgattat 20847333  T
Q  154 gg 155  Q
    ||    
T  20847334 gg 20847335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 47116021 - 47115906
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||| ||||||| ||||||||||||||||||||| |||||||||||||| |||||  ||| ||| || |||||| | ||||||||||| |||||||| |    
T  47116021 tcacatttattaaaaaaactaaaacataagaatttagagtataattttttgtgtttgttttagaataaattttatggaaagatgtaaaagcaattttctt 47115922  T
Q  140 tggctattggttatgg 155  Q
    ||| ||||| ||||||    
T  47115921 tggttattgattatgg 47115906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 10014435 - 10014333
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||||||||||||  | |||| |  |||||| ||| | || |||||| || ||||||||||||||||||||||||||||||||||    
T  10014435 tcacacttattaagaaaactaaaacatagtagtttgtaacataattgtttgtattatctttgaaataagttttataggaagatgtaaaaacaattttcat 10014336  T
Q  140 tgg 142  Q
    |||    
T  10014335 tgg 10014333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 10252177 - 10252075
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||||||||||||  | |||| |  |||||| ||| | || |||||| || ||||||||||||||||||||||||||||||||||    
T  10252177 tcacacttattaagaaaactaaaacatagtagtttgtaacataattgtttgtattatctttgaaataagttttataggaagatgtaaaaacaattttcat 10252078  T
Q  140 tgg 142  Q
    |||    
T  10252077 tgg 10252075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 40 - 148
Target Start/End: Original strand, 33973518 - 33973627
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtata-attttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttca 138  Q
    ||||||||||||| |||||||||| |||| |||||||||||||  |||||| ||||||||||  |||||||||||||| |||| || |||| ||||||||    
T  33973518 tcacacttattaacaaaactaaaatataaaaatttggagtatagtttttttgtgttttctttaaaaaaagttttatagaaagacgtcaaaataattttca 33973617  T
Q  139 ttggctattg 148  Q
     |||||||||    
T  33973618 gtggctattg 33973627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 43 - 142
Target Start/End: Original strand, 22479009 - 22479108
Alignment:
Q  43 cacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 142  Q
    |||||||||||||||||||||||||  | |||| |  ||| |||||| |||| |||||| || |||||||||||||||||||||||||| ||||||||||    
T  22479009 cacttattaagaaaactaaaacatagtagtttgtaacatagttttttgtgttatctttgaaataagttttataggaagatgtaaaaacacttttcattgg 22479108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 40 - 153
Target Start/End: Original strand, 8096970 - 8097083
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||||||||||||  | |||| |  ||| ||| || |||| || ||| || |||||||||||||||||||||||| |||||||||    
T  8096970 tcacacttattaagaaaactaaaacatagtagtttgcaacatagtttcttgtgttatccttgaaataagttttataggaagatgtaaaaataattttcat 8097069  T
Q  140 tggctattggttat 153  Q
    ||| ||||| ||||    
T  8097070 tggttattgcttat 8097083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 40 - 153
Target Start/End: Complemental strand, 31292777 - 31292664
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||| | |||||||||||||   |||||| |||||||||| || |||| || ||||||  |||| ||| ||||||||||||||||||||||||    
T  31292777 tcacacttattgaaaaaactaaaacatggtaatttgaagtataatttcttttgttctccttggaattagttctatgggaagatgtaaaaacaattttcat 31292678  T
Q  140 tggctattggttat 153  Q
    ||| |||| |||||    
T  31292677 tggttatttgttat 31292664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 8769531 - 8769644
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||||||||||||| |||| |||||||| |||||  |||||| |||  |||||| || || ||||| |||||||| |||||| ||    
T  8769531 tcacacttattaagaaaactaaaacataacaattaggagtatagtttttggtgtttttttt--aaaaagattcatgggaagttgtaaaaataatttttat 8769628  T
Q  140 tggctattggttatgg 155  Q
    |||||| || ||||||    
T  8769629 tggctaatgattatgg 8769644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 40 - 153
Target Start/End: Complemental strand, 34195054 - 34194941
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||||||||||||  | |||| |  ||| ||| || | ||  |  || || ||||||||||||||||||||||||||||||||||    
T  34195054 tcacacttattaagaaaactaaaacatagtagtttgcaacatagtttcttgtcttacccatgaaataagttttataggaagatgtaaaaacaattttcat 34194955  T
Q  140 tggctattggttat 153  Q
    ||| ||||||||||    
T  34194954 tggttattggttat 34194941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 43 - 155
Target Start/End: Original strand, 3084135 - 3084247
Alignment:
Q  43 cacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 142  Q
    ||||| ||||||||||||||| || |||||||| |||||||||| || |||  || ||  ||  |||||||| |||||||||||||||||| ||||||||    
T  3084135 cactttttaagaaaactaaaatatgagaatttgaagtataatttcttgtgtcctccttaaaattagttttatgggaagatgtaaaaacaatattcattgg 3084234  T
Q  143 ctattggttatgg 155  Q
     |||| |||||||    
T  3084235 ttatttgttatgg 3084247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 84 - 152
Target Start/End: Complemental strand, 3972402 - 3972335
Alignment:
Q  84 ttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggtta 152  Q
    |||||| ||||||||||| || ||||||||| ||||||||||||||||||||||||| |||||||||||    
T  3972402 ttttttgtgttttctttg-aataagttttatgggaagatgtaaaaacaattttcattagctattggtta 3972335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 84 - 152
Target Start/End: Original strand, 3997476 - 3997543
Alignment:
Q  84 ttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggtta 152  Q
    |||||| ||||||||||| || ||||||||| ||||||||||||||||||||||||| |||||||||||    
T  3997476 ttttttgtgttttctttg-aataagttttatgggaagatgtaaaaacaattttcattagctattggtta 3997543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 106 - 154
Target Start/End: Original strand, 34722623 - 34722671
Alignment:
Q  106 aagttttataggaagatgtaaaaacaattttcattggctattggttatg 154  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  34722623 aagttttataagaagatgtaaaaacaattttcattggctattggttatg 34722671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 31126377 - 31126275
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| || ||   |||||  |||||||||||| |||| || ||| || ||||||||| | |||||||||||| |||||||||    
T  31126377 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttgaaataagttttatggaaagatgtaaaaataattttcat 31126278  T
Q  140 tgg 142  Q
    |||    
T  31126277 tgg 31126275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 55400903 - 55400801
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| || ||   |||||  |||||||||||| |||| ||||||||| |||||| || | |||||||||||| |||| ||||    
T  55400903 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctctttggaataagtttcatggaaagatgtaaaaataattctcat 55400804  T
Q  140 tgg 142  Q
    |||    
T  55400803 tgg 55400801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 40 - 137
Target Start/End: Original strand, 25242130 - 25242227
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 137  Q
    ||||||||||||||||||||||||||||  | |||| |  ||| |||||| |||| |||||  || ||||||||||| |||||| |||||||||||||    
T  25242130 tcacacttattaagaaaactaaaacatagtagtttgtaacatagttttttgtgttatctttaaaataagttttatagaaagatgaaaaaacaattttc 25242227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 38401550 - 38401444
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggag----tataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattt 135  Q
    ||||||||||||||||||||||||||||  | |||| |     |||| |||||| |||| |||||| || |||||||||||| ||||||||||| |||||    
T  38401550 tcacacttattaagaaaactaaaacatagtagtttgtaacatatatagttttttgtgttatctttgaaataagttttatagggagatgtaaaaataattt 38401451  T
Q  136 tcattgg 142  Q
    |||||||    
T  38401450 tcattgg 38401444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 8764631 - 8764744
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||| ||||||||||||||| |||| ||||||||  ||||| |||||| |||  |||||  || || ||||| |||||||| |||||| ||    
T  8764631 tcacacttattaaaaaaactaaaacataacaattaggagtatagctttttgtgtttttttt--aaaaaaattcatgggaagttgtaaaaataatttttat 8764728  T
Q  140 tggctattggttatgg 155  Q
    |||||| || ||||||    
T  8764729 tggctaatgattatgg 8764744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 106 - 153
Target Start/End: Original strand, 16033005 - 16033052
Alignment:
Q  106 aagttttataggaagatgtaaaaacaattttcattggctattggttat 153  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||    
T  16033005 aagttttataggaagatgtaaaaacaattttcattggttattagttat 16033052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 22455967 - 22456062
Alignment:
Q  47 tattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 142  Q
    |||||||||||||||||||||  | |||| |  ||| |||||| ||||  ||||| || ||||||||||||||||| ||||||||||||| |||||    
T  22455967 tattaagaaaactaaaacatagtagtttgtaacatagttttttgtgttaactttgaaataagttttataggaagatataaaaacaattttgattgg 22456062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 30612343 - 30612228
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||| |||| |||  |||||    |||||||||||||||| |||||  ||  ||||| |||| ||||||||||||||||| ||||    
T  30612343 tcacacttattaagaaaacaaaaatatagtaatttaagatataattttttatgttctctttaaaatgagtttcatagaaagatgtaaaaacaattctcat 30612244  T
Q  140 tggctattggttatgg 155  Q
    ||| || || ||||||    
T  30612243 tggttaatgattatgg 30612228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 106 - 153
Target Start/End: Original strand, 46918231 - 46918278
Alignment:
Q  106 aagttttataggaagatgtaaaaacaattttcattggctattggttat 153  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  46918231 aagttttataggaagatctaaaaacaattttcattggttattggttat 46918278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 132
Target Start/End: Complemental strand, 17587865 - 17587779
Alignment:
Q  46 ttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaa 132  Q
    ||||||||||||||||||||||  |||||| | |||| ||| || |||| |  ||| || |||||||||||||||||||||||||||    
T  17587865 ttattaagaaaactaaaacatagtaatttgcaatatagtttcttttgttattcttgaaataagttttataggaagatgtaaaaacaa 17587779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 21214410 - 21214305
Alignment:
Q  40 tcacacttattaagaaaactaaaacata--agaa-tttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaatttt 136  Q
    |||||||||||||||||| |||||||||  || | |||| |  ||| |||||| |||| | |||| || ||||||||||| |||||||||||||||||||    
T  21214410 tcacacttattaagaaaattaaaacatagtagtagtttgtaacatagttttttgtgttatttttgaaataagttttatagaaagatgtaaaaacaatttt 21214311  T
Q  137 cattgg 142  Q
    ||||||    
T  21214310 cattgg 21214305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 34022764 - 34022662
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| || ||   |||||  |||||||||||| |||| || ||| || ||||||||| | |||||||||||| |||| ||||    
T  34022764 tcacacttattaagaaaactaatacttagtgatttgaggtataattttttgtgttctccttgaaataagttttatggaaagatgtaaaaataattctcat 34022665  T
Q  140 tgg 142  Q
    |||    
T  34022664 tgg 34022662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 54725628 - 54725670
Alignment:
Q  106 aagttttataggaagatgtaaaaacaattttcattggctattg 148  Q
    ||||||||||||||||||||||||||||||||||||| |||||    
T  54725628 aagttttataggaagatgtaaaaacaattttcattggttattg 54725670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 41 - 138
Target Start/End: Original strand, 47443927 - 47444023
Alignment:
Q  41 cacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttca 138  Q
    |||| ||||||||||||||||||||||  | |||| |  ||| |||||| |||| |||||| || || ||||||| ||||||||||||||||||||||    
T  47443927 cacatttattaagaaaactaaaacatattagtttgtaacatagttttttgtgttatctttgaaataaattttata-gaagatgtaaaaacaattttca 47444023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 140
Target Start/End: Complemental strand, 21654410 - 21654310
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| || ||   |||||  |||||||||||| |||| || ||| || |||||| || | |||||||||||| |||||||||    
T  21654410 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttgaaataagtttcatggaaagatgtaaaaataattttcat 21654311  T
Q  140 t 140  Q
    |    
T  21654310 t 21654310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 153
Target Start/End: Original strand, 30454687 - 30454789
Alignment:
Q  50 taagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattgg 149  Q
    ||||||||||||||||||  | |||| |  ||| ||| || |||| || ||| || ||||||||||| ||||||||||||||||||| ||||| ||||||    
T  30454687 taagaaaactaaaacatagtagtttgcaacatagtttcttgtgttatccttgaaataagttttatagaaagatgtaaaaacaatttt-attggttattgg 30454785  T
Q  150 ttat 153  Q
    ||||    
T  30454786 ttat 30454789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 28793327 - 28793225
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| || ||   |||||  |||||||||||| |||| || |||||| || ||| || | |||||||||||| |||| ||||    
T  28793327 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttatccttggaataaatttcatggaaagatgtaaaaataattctcat 28793228  T
Q  140 tgg 142  Q
    |||    
T  28793227 tgg 28793225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 40 - 137
Target Start/End: Original strand, 46557122 - 46557219
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataatttttta-tgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 137  Q
    ||||| ||||||||||||||||| |||||||||||  |  ||| ||||||  |||||||||| ||| |||||| || |||||||||||||| |||||||    
T  46557122 tcacatttattaagaaaactaaagcataagaatttt-atcatagtttttttgtgttttctttagaataagtttcatgggaagatgtaaaaataattttc 46557219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 40 - 82
Target Start/End: Original strand, 47866876 - 47866918
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtata 82  Q
    ||||||||||||| || ||||||||||||||||||||||||||    
T  47866876 tcacacttattaaaaagactaaaacataagaatttggagtata 47866918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 6075115 - 6075078
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  6075115 ttgaatgtaatttgcatttaattttatgagaataaaca 6075078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 155
Target Start/End: Complemental strand, 6752764 - 6752727
Alignment:
Q  118 aagatgtaaaaacaattttcattggctattggttatgg 155  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  6752764 aagatgtaaaaacaattttaattggctattggttatgg 6752727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 7866573 - 7866610
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  7866573 ttgaatgtaattttcatttaattttatgagaataaaca 7866610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 153
Target Start/End: Original strand, 7886573 - 7886682
Alignment:
Q  44 acttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggc 143  Q
    ||||||||||||||||||||||||  | ||||    ||| ||| || |||| |  ||| || || |||||||| |||||||||||||||||||||||||     
T  7886573 acttattaagaaaactaaaacatagtagtttgtgacatagtttcttgtgttattcttgaaataaattttatagaaagatgtaaaaacaattttcattggt 7886672  T
Q  144 tattggttat 153  Q
    |||| |||||    
T  7886673 tattagttat 7886682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 37074992 - 37074955
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  37074992 ttgaatgtaatttgcatttaattttatgagaataaaca 37074955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 47864225 - 47864188
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  47864225 ttgaatgtaatttgcatttaattttatgagaataaaca 47864188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 50730143 - 50730106
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    |||||||||||||||||||||||||| |||||||||||    
T  50730143 ttgaatgtaatttacatttaattttaagagaataaaca 50730106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 50782711 - 50782748
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    |||||||||||||||||||||||||| |||||||||||    
T  50782711 ttgaatgtaatttacatttaattttaagagaataaaca 50782748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 213
Target Start/End: Original strand, 14752298 - 14752333
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaa 213  Q
    ||||||||||||| ||||||||||||||||||||||    
T  14752298 ttgaatgtaatttgcatttaattttatgagaataaa 14752333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 142
Target Start/End: Original strand, 37324038 - 37324141
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagtttt-ataggaagatgtaaaaacaattttca 138  Q
    |||||||||||||||||||||| || ||   |||||   ||||||||||| |||| |||||| || ||||||| || | |||||||||||| |||| |||    
T  37324038 tcacacttattaagaaaactaacacttagtgatttgagatataattttttgtgttatctttgaaataagttttcatggaaagatgtaaaaataattctca 37324137  T
Q  139 ttgg 142  Q
    ||||    
T  37324138 ttgg 37324141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 51309578 - 51309463
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||| ||||||||||||  ||||||||  | ||||  |||||||||||| |||| |  |||||| |||||| |||| |||||||| |||||||| | ||    
T  51309578 tcacatttattaagaaaataaaaacatagtagtttgaggtataattttttgtgttcttcttggaataagtttcatagaaagatgtataaacaattcttat 51309479  T
Q  140 tggctattggttatgg 155  Q
    ||| || || ||||||    
T  51309478 tggttaatgattatgg 51309463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Complemental strand, 6438114 - 6438080
Alignment:
Q  181 aatgtaatttacatttaattttatgagaataaaca 215  Q
    |||||||||| ||||||||||||||||||||||||    
T  6438114 aatgtaatttgcatttaattttatgagaataaaca 6438080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Complemental strand, 8703140 - 8703106
Alignment:
Q  181 aatgtaatttacatttaattttatgagaataaaca 215  Q
    |||||||||| ||||||||||||||||||||||||    
T  8703140 aatgtaatttgcatttaattttatgagaataaaca 8703106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Complemental strand, 9055027 - 9054993
Alignment:
Q  181 aatgtaatttacatttaattttatgagaataaaca 215  Q
    |||||||||| ||||||||||||||||||||||||    
T  9055027 aatgtaatttgcatttaattttatgagaataaaca 9054993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 11054398 - 11054432
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataa 212  Q
    ||||||||||||| |||||||||||||||||||||    
T  11054398 ttgaatgtaatttgcatttaattttatgagaataa 11054432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 23311683 - 23311717
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataa 212  Q
    ||||||||||| |||||||||||||||||||||||    
T  23311683 ttgaatgtaatatacatttaattttatgagaataa 23311717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 142
Target Start/End: Original strand, 26641067 - 26641169
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| || ||   |||||   ||||||||||| |||| || |||||| |||||| || | |||||| ||||| |||| ||||    
T  26641067 tcacacttattaagaaaactaacacttagtgatttgagatataattttttgtgttctccttggaataagtttcatggaaagatgcaaaaataattctcat 26641166  T
Q  140 tgg 142  Q
    |||    
T  26641167 tgg 26641169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 30189604 - 30189570
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataa 212  Q
    |||||||||||||||||||||||||| ||||||||    
T  30189604 ttgaatgtaatttacatttaattttacgagaataa 30189570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 142
Target Start/End: Original strand, 32322194 - 32322296
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||| ||| || ||   |||||  |||||||||||| |||| || |||||| |||||| || | |||||| ||||| |||| ||||    
T  32322194 tcacacttattaagaaaattaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgcaaaaataattctcat 32322293  T
Q  140 tgg 142  Q
    |||    
T  32322294 tgg 32322296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Original strand, 33974652 - 33974686
Alignment:
Q  181 aatgtaatttacatttaattttatgagaataaaca 215  Q
    |||||||||| ||||||||||||||||||||||||    
T  33974652 aatgtaatttgcatttaattttatgagaataaaca 33974686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Complemental strand, 36546573 - 36546539
Alignment:
Q  181 aatgtaatttacatttaattttatgagaataaaca 215  Q
    |||||||||| ||||||||||||||||||||||||    
T  36546573 aatgtaatttgcatttaattttatgagaataaaca 36546539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Original strand, 36561742 - 36561776
Alignment:
Q  181 aatgtaatttacatttaattttatgagaataaaca 215  Q
    |||||||||| ||||||||||||||||||||||||    
T  36561742 aatgtaatttgcatttaattttatgagaataaaca 36561776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 37042507 - 37042541
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataa 212  Q
    ||||||||||||| |||||||||||||||||||||    
T  37042507 ttgaatgtaatttgcatttaattttatgagaataa 37042541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 50651127 - 50651161
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataa 212  Q
    ||||||||||||| |||||||||||||||||||||    
T  50651127 ttgaatgtaatttgcatttaattttatgagaataa 50651161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 579228 - 579265
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  579228 ttgaatgtaatttgcatttaattttatgagattaaaca 579265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Complemental strand, 9264038 - 9264005
Alignment:
Q  182 atgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||| ||||||||||||||||||||||||    
T  9264038 atgtaatttgcatttaattttatgagaataaaca 9264005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 211
Target Start/End: Original strand, 20847358 - 20847391
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaata 211  Q
    ||||||||||||| ||||||||||||||||||||    
T  20847358 ttgaatgtaatttgcatttaattttatgagaata 20847391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 23910585 - 23910622
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| ||||||||| ||||||||||||||    
T  23910585 ttgaatgtaatttgcatttaattatatgagaataaaca 23910622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 28875440 - 28875403
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    |||||||||||||  |||||||||||||||||||||||    
T  28875440 ttgaatgtaatttgtatttaattttatgagaataaaca 28875403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 29235227 - 29235190
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    |||||||||||||||||||||||| |||| ||||||||    
T  29235227 ttgaatgtaatttacatttaatttaatgataataaaca 29235190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 32619920 - 32619957
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| ||||||||||||| ||||||||||    
T  32619920 ttgaatgtaatttgcatttaattttattagaataaaca 32619957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 207
Target Start/End: Original strand, 34722695 - 34722724
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgag 207  Q
    ||||||||||||||||||||||||||||||    
T  34722695 ttgaatgtaatttacatttaattttatgag 34722724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 213
Target Start/End: Original strand, 36509550 - 36509583
Alignment:
Q  180 gaatgtaatttacatttaattttatgagaataaa 213  Q
    |||||||||||||||||||||| |||||||||||    
T  36509550 gaatgtaatttacatttaatttgatgagaataaa 36509583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 41476419 - 41476456
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    |||||| |||||| ||||||||||||||||||||||||    
T  41476419 ttgaatctaatttgcatttaattttatgagaataaaca 41476456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 48802570 - 48802607
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| |||||| |||||||||||||||||    
T  48802570 ttgaatgtaatttgcatttacttttatgagaataaaca 48802607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 53270267 - 53270230
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    |||||||||||||  |||||||||||||||||||||||    
T  53270267 ttgaatgtaatttgtatttaattttatgagaataaaca 53270230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 54464985 - 54465022
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| | ||||||||||||||||||||||    
T  54464985 ttgaatgtaatttgcgtttaattttatgagaataaaca 54465022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 140
Target Start/End: Complemental strand, 6784446 - 6784390
Alignment:
Q  84 ttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcatt 140  Q
    |||||| |||| |||||  || || ||||||||||||||||||||| ||||||||||    
T  6784446 ttttttgtgttatctttcaaataaattttataggaagatgtaaaaataattttcatt 6784390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 142
Target Start/End: Original strand, 45347674 - 45347770
Alignment:
Q  46 ttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 142  Q
    |||||||||||||||| || ||   |||||  |||| ||||||| |||| || |||||| |||||| || | |||||||||||| |||| |||||||    
T  45347674 ttattaagaaaactaacacttagtgatttgaggtatgattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattctcattgg 45347770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 142
Target Start/End: Complemental strand, 45781524 - 45781460
Alignment:
Q  78 gtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 142  Q
    |||||||||||| |||| ||||| ||| |||||| || | |||||||||||| |||| |||||||    
T  45781524 gtataattttttgtgttctctttagaataagtttcatggaaagatgtaaaaataattctcattgg 45781460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 46303737 - 46303689
Alignment:
Q  46 ttattaagaaaactaaaacataagaatttggagtataattttttatgtt 94  Q
    ||||||||||||||||||||||  |||||  | ||||||||||||||||    
T  46303737 ttattaagaaaactaaaacatagtaatttaaaatataattttttatgtt 46303689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 142
Target Start/End: Complemental strand, 48291922 - 48291886
Alignment:
Q  106 aagttttataggaagatgtaaaaacaattttcattgg 142  Q
    ||||||||||||||| |||||||| ||||||||||||    
T  48291922 aagttttataggaaggtgtaaaaataattttcattgg 48291886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 96; Significance: 3e-47; HSPs: 2)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 566 - 681
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  566 tcacacttattaagaaaactaaaacataagaatttggagtatagttttatgtgttttctttgaaaaaagttttatagggagatgtaaaaacaattttcat 665  T
Q  140 tggctattggttatgg 155  Q
    ||||||||||||||||    
T  666 tggctattggttatgg 681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 704 - 738
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataa 212  Q
    ||||||||||||| |||||||||||||||||||||    
T  704 ttgaatgtaatttgcatttaattttatgagaataa 738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 92; Significance: 7e-45; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 78125 - 78010
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  78125 tcacacttattaagaaaactaaaacataagaatttagagtatagttttttgtgttttctttgaaaaaagttgtataggaagatgtaaaaacaattttcat 78026  T
Q  140 tggctattggttatgg 155  Q
    |||| |||||||||||    
T  78025 tggccattggttatgg 78010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 77987 - 77950
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||||||||||||||||||||||||||||    
T  77987 ttgaatgtaatttacatttaattttatgagaataaaca 77950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 44764 - 44879
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||| ||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||| ||  |||||||||||||||    
T  44764 tcacatttattaagaaaactaaaacataataatttggagtatatttttttgtgttttctttggaaaaagttttataggaatattaaaaaacaattttcat 44863  T
Q  140 tggctattggttatgg 155  Q
    ||||||||||||||||    
T  44864 tggctattggttatgg 44879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442 (Bit Score: 84; Significance: 4e-40; HSPs: 2)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 44 - 155
Target Start/End: Complemental strand, 10209 - 10098
Alignment:
Q  44 acttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggc 143  Q
    |||||||||||||| ||||||||||||||||||| | || |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |    
T  10209 acttattaagaaaattaaaacataagaatttggaatgtagttttttgtgttttctttagaaaaagttttataggaagatgtaaaaacaattttcattgac 10110  T
Q  144 tattggttatgg 155  Q
    ||||||||||||    
T  10109 tattggttatgg 10098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 10075 - 10038
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| ||||||||| ||||||||||||||    
T  10075 ttgaatgtaatttgcatttaattgtatgagaataaaca 10038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0774 (Bit Score: 74; Significance: 4e-34; HSPs: 2)
Name: scaffold0774
Description:

Target: scaffold0774; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 66 - 155
Target Start/End: Original strand, 3447 - 3536
Alignment:
Q  66 taagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 155  Q
    ||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  3447 taagaatttggagtatagttttttgtgttttcttttgaaaaagttttataggaagatgtaaaaataattttcattggctattggttatgg 3536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0774; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 3559 - 3596
Alignment:
Q  178 ttgaatgtaatttacatttaattttatgagaataaaca 215  Q
    ||||||||||||| ||||||||| ||||||||||||||    
T  3559 ttgaatgtaatttgcatttaattgtatgagaataaaca 3596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 72; Significance: 6e-33; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 44 - 155
Target Start/End: Complemental strand, 157958 - 157847
Alignment:
Q  44 acttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggc 143  Q
    ||||||||||||||||||| |||||||||||| || ||| |||||| |||||||||||||| |||||| || || |||||||||||||||||||||||||    
T  157958 acttattaagaaaactaaagcataagaatttgtagcatagttttttgtgttttctttggaataagtttcatggggagatgtaaaaacaattttcattggc 157859  T
Q  144 tattggttatgg 155  Q
     |||||||||||    
T  157858 aattggttatgg 157847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 66; Significance: 2e-29; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 46 - 155
Target Start/End: Complemental strand, 155022 - 154914
Alignment:
Q  46 ttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggcta 145  Q
    ||||||||||||||||||||||||||| || | |||| |||||  | ||||||||| |||||||||||||| |||||||||||||||||| |||||||||    
T  155022 ttattaagaaaactaaaacataagaatctgaaatatagtttttg-tattttctttgaaaaaagttttatagaaagatgtaaaaacaatttacattggcta 154924  T
Q  146 ttggttatgg 155  Q
    ||||||||||    
T  154923 ttggttatgg 154914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Complemental strand, 154888 - 154856
Alignment:
Q  181 aatgtaatttacatttaattttatgagaataaa 213  Q
    |||||||||| ||||||||||||||||||||||    
T  154888 aatgtaatttgcatttaattttatgagaataaa 154856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 60; Significance: 9e-26; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 1180 - 1065
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||| ||||||  |||||||||| |||| ||||||||||||| |||||| |||||| |||  |||||||||||||| |||||||||||||| |||||||    
T  1180 tcacatttattataaaaactaaaatataaaaatttggagtatagttttttgtgtttttttttaaaaaagttttatagaaagatgtaaaaacagttttcat 1081  T
Q  140 tggctattggttatgg 155  Q
    ||  ||||||||||||    
T  1080 tgagtattggttatgg 1065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 9140 - 9025
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    ||||| ||||||  |||||||||| |||| ||||||||||||| |||||| |||||| |||  |||||||||||||| |||||||||||||| |||||||    
T  9140 tcacatttattataaaaactaaaatataaaaatttggagtatagttttttgtgtttttttttaaaaaagttttatagaaagatgtaaaaacagttttcat 9041  T
Q  140 tggctattggttatgg 155  Q
    ||  ||||||||||||    
T  9040 tgagtattggttatgg 9025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 65 - 153
Target Start/End: Complemental strand, 40321 - 40234
Alignment:
Q  65 ataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttat 153  Q
    ||||||||||| ||||||  ||||| |||||||||||||| || |||||||| ||| ||||||||||||||||||||||||||||||||    
T  40321 ataagaatttg-agtatagctttttgtgttttctttggaataaattttatagaaagttgtaaaaacaattttcattggctattggttat 40234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 40 - 137
Target Start/End: Original strand, 5868 - 5965
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 137  Q
    |||||||||||||||||| |||||||||  | |||| | |||| |||||| |||| || ||| || ||||||||||||||||||||||||||||||||    
T  5868 tcacacttattaagaaaattaaaacatagtagtttgtaatatagttttttgtgttatcattgaaataagttttataggaagatgtaaaaacaattttc 5965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 3336 - 3234
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||| |||||||||  | |||| |  ||| |||||| |||| |||||| || ||||||||||||||||| |||||||||||| |||    
T  3336 tcacacttattaagaaaattaaaacatagtagtttgtaacatagttttttgtgttatctttgaaataagttttataggaagatctaaaaacaatttccat 3237  T
Q  140 tgg 142  Q
    |||    
T  3236 tgg 3234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1786 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold1786
Description:

Target: scaffold1786; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 92 - 155
Target Start/End: Complemental strand, 963 - 900
Alignment:
Q  92 gttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 155  Q
    ||||||||||||| ||||||||||| ||||| |||||| ||||||||||| |||||||||||||    
T  963 gttttctttggaataagttttatagaaagatataaaaataattttcattgactattggttatgg 900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1157 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold1157
Description:

Target: scaffold1157; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 42 - 152
Target Start/End: Original strand, 1655 - 1772
Alignment:
Q  42 acacttattaagaaaactaaaacataaga-------atttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaatt 134  Q
    ||||||||||||||||||||||||| | |       ||||||| |||||||| || ||||||| ||||||  ||||| || |||||||||||||||| ||    
T  1655 acacttattaagaaaactaaaacatgatagatagtaatttggattataatttattgtgttttccttggaattagtttcatgggaagatgtaaaaacattt 1754  T
Q  135 ttcattggctattggtta 152  Q
    |||||||| |||| ||||    
T  1755 ttcattggttatttgtta 1772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 84 - 155
Target Start/End: Complemental strand, 160374 - 160303
Alignment:
Q  84 ttttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg 155  Q
    |||||| |||||||||||||| ||  || || ||||||||||||| || |||||||||||||||||||||||    
T  160374 ttttttgtgttttctttggaataaaattcatgggaagatgtaaaaccagttttcattggctattggttatgg 160303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 153
Target Start/End: Original strand, 160912 - 161025
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||| |||||||||  | |||| |  ||| ||| || |||| || ||| || |||||| |||| ||| ||||||||||||||||||    
T  160912 tcacacttattaagaaaattaaaacatagtagtttgcaacatagtttcttgtgttatccttgaaataagtttgatagaaagttgtaaaaacaattttcat 161011  T
Q  140 tggctattggttat 153  Q
    ||| |||| |||||    
T  161012 tggttatttgttat 161025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 4794 - 4692
Alignment:
Q  40 tcacacttattaagaaaactaaaacataagaatttggagtataattttttatgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 139  Q
    |||||||||||||||||||||| || ||   |||||  |||||||||||  |||| || ||| || |||||| || | |||||||||||| |||| ||||    
T  4794 tcacacttattaagaaaactaacacttagtgatttgaggtataatttttagtgttctccttgaaataagtttcatcgaaagatgtaaaaataattctcat 4695  T
Q  140 tgg 142  Q
    |||    
T  4694 tgg 4692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University