View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21018_high_19 (Length: 245)
Name: NF21018_high_19
Description: NF21018
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21018_high_19 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 18 - 245
Target Start/End: Complemental strand, 14346558 - 14346331
Alignment:
| Q |
18 |
tttataagattgatcaaagctctccaacaattttcgacccggaataccattaatcgaaacccaacccacttgttttccaatcttaacctgnnnnnnncag |
117 |
Q |
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| T |
14346558 |
tttataagattgatcaaagctctcaaacaattttcgacccggaataccattaatcgaaacccaacccacttgttttccaatcttaacctgaaaaaaacag |
14346459 |
T |
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| Q |
118 |
aaaaacaaagcagcagacacttccaaaccataataggtaagaaggcattcgaaagcgcgagcaaaagcccaactgttaggatgaagttgagtcggagaaa |
217 |
Q |
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| T |
14346458 |
aaaaacaaagcagcagacacttccaaaccataataggtaagaaggcattcgaacgcgctagcaaaagcccaactgttaggatgaagttgagacggagaaa |
14346359 |
T |
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| Q |
218 |
tattcaaccagttcagtacctcacactc |
245 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
14346358 |
tattcaaccagttcagtacctcacactc |
14346331 |
T |
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