View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21022_high_11 (Length: 384)
Name: NF21022_high_11
Description: NF21022
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21022_high_11 |
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Alignment Details
Target: chr7 (Bit Score: 294; Significance: 1e-165; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 13 - 367
Target Start/End: Complemental strand, 38027460 - 38027122
Alignment:
| Q |
13 |
aatattgaccaaagaacttgcacatcttcacatgggcatgacttaacatccttgtataagatgtataatcctctacctattttacataagaaacaaaaat |
112 |
Q |
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| T |
38027460 |
aatattgaccaaagaacttgcacatcttcacatgggcatgacttaacatccttgtataagatgtataatcctctacctattttacataagaaacaaaaat |
38027361 |
T |
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| Q |
113 |
taatcggtaataattactatatcatcattgttttgtataaagtaggagtatataaatatatgaacatgaaattatatgaattgaacaagaatggtcaaag |
212 |
Q |
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| T |
38027360 |
taatcggtaataattactatatcatcattg----------------agtatataaatatatgaacatgaaattatatgaattgaacaagaatggtcaaag |
38027277 |
T |
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| Q |
213 |
aaaaggatcataatgcaaatactagcaaaatgaataaaagaaatgcaatggaattaatgtgactagaattgaaattataatgctaacttacgttttttat |
312 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| |
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| T |
38027276 |
aaaaggatcataatgcaaatactagcaaaatgaataaaagaaatgcaatggaattaatgtgactagaatttaaattataatgctaacttacgtcttttat |
38027177 |
T |
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| Q |
313 |
tggttgaatggatccgaagccaaagcttcttcaatgggcagagtagggattgaag |
367 |
Q |
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| T |
38027176 |
tggttgaatggatccgaagccaaagcttcttcaatgggcagagtagggattgaag |
38027122 |
T |
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