View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21023_high_2 (Length: 310)
Name: NF21023_high_2
Description: NF21023
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21023_high_2 |
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Alignment Details
Target: chr4 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 18 - 299
Target Start/End: Original strand, 51382479 - 51382779
Alignment:
| Q |
18 |
aaactaccccacttgtttctatgcaagtgtaaattgttgctttgcaata-------------------ttgatcggatcaagttttgtgttgtttttagg |
98 |
Q |
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| T |
51382479 |
aaactaccccacttgtttctatgcaagtgtaaattgttgctttgcaatattgaaagcgaaaaagaatattgatcggatcaagttttgtgttgtttttagg |
51382578 |
T |
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| Q |
99 |
agaaatagatggtgaattatattggaaggaaccgtctcatggctacatatttatatataagatgaaacatgaataactctatgttttgtgtgcattttct |
198 |
Q |
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| T |
51382579 |
agaaatagatggtgaattatattggaaggaaccgtctcatggctacatatttatatataagatgaaacatgaataactctatgttttgtgtgcattttct |
51382678 |
T |
|
| Q |
199 |
gctcctactctaacactaatctttaccaggtatcattagcttttcaaatttatttctactattggatttcagattcagccttgaaatattttcatgcctt |
298 |
Q |
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| T |
51382679 |
gttcctactctaacactaatctttaccaggtatcattagcttttcaaatttatttctactattggatttcagattcagccttgaaatattttcatgcctt |
51382778 |
T |
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| Q |
299 |
t |
299 |
Q |
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| T |
51382779 |
t |
51382779 |
T |
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