View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21023_low_7 (Length: 257)
Name: NF21023_low_7
Description: NF21023
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21023_low_7 |
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Alignment Details
Target: chr3 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 18 - 245
Target Start/End: Original strand, 52761508 - 52761735
Alignment:
| Q |
18 |
ctgacaacctccaatttttctagatcaatagaaccatctctcgttgaccatgttgacggagatatatttgcctttttcatttgctccttaaataaacgca |
117 |
Q |
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| T |
52761508 |
ctgacaacctccaatttttctagatcaatagaaccatctcttgttgaccatgttgacggagatatatttgcctttttcatttgctccttaaataaacgca |
52761607 |
T |
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| Q |
118 |
acttacgggacatttccccacatcttttagcctatttgataaaaccgtaagctttccaatctggtctagtaaatcagttgtgtaaaatgtctcataataa |
217 |
Q |
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||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52761608 |
acttacgcgacatttccccacatcttttaacctatttgataaaaccgtaagctttccaatctggtctagtaaatcagttgtgtaaaatgtctcataataa |
52761707 |
T |
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| Q |
218 |
aaatgttagcagaattagatttcatgat |
245 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
52761708 |
aaatgttagcagaattagatttcatgat |
52761735 |
T |
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