View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21026_high_4 (Length: 373)
Name: NF21026_high_4
Description: NF21026
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21026_high_4 |
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Alignment Details
Target: chr7 (Bit Score: 275; Significance: 1e-154; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 17 - 356
Target Start/End: Complemental strand, 22277007 - 22276661
Alignment:
| Q |
17 |
tgaaggttataatgtgctttcggaaggaattgaggagaaaaaattagataaaagcaaaacttatattgttt-gagaaaatactttgattcttatttactt |
115 |
Q |
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| T |
22277007 |
tgaaggttataatgtgctttcggaaggaattgaggagaaaaaatttgataaaagcaaaacttatattgttttgagaaaatactttgattcttatttactt |
22276908 |
T |
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| Q |
116 |
gtttgatttaccggtaacaaagttctaccttatttataaaactttctttggactaactacttatttattatagaa-----tatgcttcctaccaaacata |
210 |
Q |
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| T |
22276907 |
gtttgatttaccggtgacaaagttctaccttatttataaaactttctttggactaactacttatttattatagaactttctatgcttcctaccaaacata |
22276808 |
T |
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| Q |
211 |
ttcttttgaatttaaatgtgacggttactgcatcaaattcttgtagataatatataagaaaaggaaacatgatttatgctgtgaaccgcaattt-gtatg |
309 |
Q |
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|| ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
22276807 |
ttgttttgaatttaaaagtgacgggtactgcatcaaattcttgtagataatatataagaaaaggaaacatgatttatgctgtgaaccgcaatttggtatg |
22276708 |
T |
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| Q |
310 |
tgcgtaccggtatgtggtataatagtaaattggttcatacaaattct |
356 |
Q |
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| T |
22276707 |
tgcgtaccggtttgtggtattttagtaaattggttcacacaaattct |
22276661 |
T |
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