View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21030_high_9 (Length: 250)
Name: NF21030_high_9
Description: NF21030
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21030_high_9 |
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Alignment Details
Target: chr4 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 38083472 - 38083713
Alignment:
| Q |
1 |
ttgaatgacatcacaagttagctaaactatcagtacatttattagtttctcggaaaatatgcttaattctggcctcatgatcttcttattgggaacaaca |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
38083472 |
ttgaatgacatcacaagttagctaaactatcagtacatttattagtttctcggaaaatatgcttaattttggcctcatgatcttcttattgggaacaaca |
38083571 |
T |
|
| Q |
101 |
agacctcacccattagtcgcgcttacatccttgccctacaaacaatcaactacattaattttagaatccataagaagcctcctacatgttaaatatcttt |
200 |
Q |
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|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
38083572 |
agacctcacccattagtcgcgcttacatacttgccctacaaacaatcaactacattaactttagaatccataagaagcctcctacatgttaaatatcttt |
38083671 |
T |
|
| Q |
201 |
ttcttgtgaattgaagaccctcttatcatctactcctatgct |
242 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |
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| T |
38083672 |
ttcttgtgaattgaagaccctcttatcatctactcctatgct |
38083713 |
T |
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