View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21031_high_3 (Length: 480)

Name: NF21031_high_3
Description: NF21031
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21031_high_3
NF21031_high_3
[»] chr2 (43 HSPs)
chr2 (127-464)||(14383846-14384182)
chr2 (190-232)||(7213575-7213617)
chr2 (183-233)||(45464179-45464229)
chr2 (173-233)||(9724960-9725021)
chr2 (188-233)||(33755355-33755400)
chr2 (188-233)||(36103265-36103310)
chr2 (190-225)||(733984-734019)
chr2 (183-226)||(2882078-2882121)
chr2 (185-232)||(10394248-10394295)
chr2 (185-232)||(28844157-28844204)
chr2 (190-232)||(18460588-18460630)
chr2 (190-234)||(3199995-3200040)
chr2 (188-233)||(13375152-13375197)
chr2 (196-233)||(30757532-30757569)
chr2 (196-233)||(40965120-40965157)
chr2 (185-234)||(43950411-43950460)
chr2 (181-233)||(3123737-3123789)
chr2 (173-232)||(6685637-6685697)
chr2 (188-232)||(10069550-10069594)
chr2 (190-226)||(10988305-10988341)
chr2 (185-233)||(43077690-43077738)
chr2 (185-233)||(44534447-44534495)
chr2 (188-231)||(565187-565230)
chr2 (195-234)||(2048397-2048436)
chr2 (183-234)||(2756767-2756818)
chr2 (181-232)||(18181178-18181229)
chr2 (194-269)||(19031866-19031940)
chr2 (186-221)||(21181509-21181544)
chr2 (188-227)||(24775778-24775817)
chr2 (183-233)||(36155606-36155657)
chr2 (190-233)||(38280160-38280203)
chr2 (195-233)||(9472527-9472565)
chr2 (183-233)||(28301527-28301577)
chr2 (183-233)||(28527057-28527107)
chr2 (190-232)||(39807313-39807355)
chr2 (190-232)||(43182372-43182414)
chr2 (183-233)||(44736959-44737009)
chr2 (188-233)||(3100498-3100543)
chr2 (196-233)||(28925812-28925849)
chr2 (199-232)||(33880221-33880254)
chr2 (188-228)||(8550611-8550651)
chr2 (195-234)||(13222173-13222213)
chr2 (79-115)||(14384170-14384206)
[»] chr5 (34 HSPs)
chr5 (341-464)||(19852632-19852755)
chr5 (181-253)||(39183575-39183644)
chr5 (401-464)||(27297297-27297360)
chr5 (196-233)||(11099442-11099479)
chr5 (185-230)||(28057798-28057843)
chr5 (183-233)||(3725279-3725329)
chr5 (183-233)||(42575603-42575653)
chr5 (188-229)||(4412479-4412520)
chr5 (188-233)||(15814740-15814785)
chr5 (198-279)||(22983050-22983130)
chr5 (188-233)||(35646054-35646099)
chr5 (188-232)||(6610935-6610979)
chr5 (185-233)||(16283552-16283600)
chr5 (185-233)||(41594812-41594860)
chr5 (190-233)||(17242919-17242962)
chr5 (183-233)||(22582837-22582887)
chr5 (196-230)||(25344708-25344742)
chr5 (183-233)||(39008225-39008275)
chr5 (195-233)||(42870949-42870987)
chr5 (188-233)||(858433-858478)
chr5 (185-218)||(5816828-5816861)
chr5 (188-233)||(15254863-15254908)
chr5 (190-234)||(15564856-15564901)
chr5 (188-232)||(24231108-24231150)
chr5 (196-233)||(25814470-25814507)
chr5 (190-234)||(31090404-31090449)
chr5 (188-233)||(33988298-33988343)
chr5 (192-233)||(36446652-36446693)
chr5 (192-233)||(36469059-36469100)
chr5 (196-233)||(41184766-41184803)
chr5 (197-233)||(4576375-4576411)
chr5 (190-226)||(17700033-17700069)
chr5 (190-226)||(32659915-32659951)
chr5 (200-232)||(36302049-36302081)
[»] chr8 (32 HSPs)
chr8 (367-464)||(32644658-32644755)
chr8 (184-233)||(29615892-29615941)
chr8 (173-247)||(39998245-39998317)
chr8 (181-233)||(4480434-4480485)
chr8 (186-233)||(139118-139165)
chr8 (183-233)||(28802860-28802910)
chr8 (188-233)||(22324919-22324964)
chr8 (181-233)||(5392140-5392192)
chr8 (190-233)||(40077714-40077757)
chr8 (196-233)||(26677180-26677217)
chr8 (188-233)||(32241388-32241433)
chr8 (188-233)||(33190873-33190918)
chr8 (188-233)||(37219725-37219770)
chr8 (188-233)||(37703085-37703130)
chr8 (184-232)||(29638395-29638443)
chr8 (195-234)||(33743881-33743921)
chr8 (197-233)||(38252401-38252437)
chr8 (190-233)||(5423128-5423171)
chr8 (173-232)||(5878190-5878252)
chr8 (186-233)||(3384630-3384679)
chr8 (181-231)||(4274265-4274315)
chr8 (188-234)||(15559093-15559139)
chr8 (183-233)||(42412347-42412397)
chr8 (196-233)||(12653793-12653830)
chr8 (190-234)||(14690060-14690105)
chr8 (188-233)||(33746183-33746228)
chr8 (193-234)||(37459444-37459485)
chr8 (196-233)||(44790386-44790423)
chr8 (197-233)||(2349458-2349494)
chr8 (181-225)||(9014794-9014838)
chr8 (201-233)||(22490492-22490524)
chr8 (195-234)||(45420901-45420941)
[»] chr4 (52 HSPs)
chr4 (173-232)||(48400596-48400656)
chr4 (173-233)||(34790915-34790976)
chr4 (196-232)||(8295135-8295171)
chr4 (183-231)||(49306680-49306728)
chr4 (183-233)||(42185760-42185810)
chr4 (183-233)||(49448934-49448984)
chr4 (188-233)||(4357665-4357710)
chr4 (188-233)||(42024165-42024210)
chr4 (196-233)||(42367895-42367932)
chr4 (189-234)||(44020732-44020777)
chr4 (196-229)||(54729452-54729485)
chr4 (181-233)||(4360372-4360424)
chr4 (195-253)||(12619792-12619847)
chr4 (196-232)||(29550692-29550728)
chr4 (186-229)||(26185278-26185321)
chr4 (190-233)||(41203837-41203880)
chr4 (183-234)||(52676994-52677045)
chr4 (183-233)||(22872350-22872400)
chr4 (191-233)||(27655268-27655310)
chr4 (190-232)||(42051621-42051663)
chr4 (181-226)||(3503030-3503075)
chr4 (191-232)||(4727621-4727662)
chr4 (188-233)||(16493262-16493307)
chr4 (196-233)||(17237149-17237186)
chr4 (194-234)||(20964250-20964291)
chr4 (188-233)||(27977245-27977290)
chr4 (188-233)||(30568761-30568806)
chr4 (188-233)||(35909537-35909582)
chr4 (188-233)||(37309796-37309841)
chr4 (196-233)||(38160116-38160153)
chr4 (196-233)||(38977098-38977135)
chr4 (196-233)||(42670347-42670384)
chr4 (192-233)||(51076375-51076416)
chr4 (185-233)||(2906758-2906806)
chr4 (201-233)||(8065652-8065684)
chr4 (195-234)||(8759884-8759924)
chr4 (185-233)||(9051941-9051989)
chr4 (201-233)||(11469940-11469972)
chr4 (201-233)||(11521489-11521521)
chr4 (195-234)||(28330899-28330939)
chr4 (199-231)||(29645055-29645087)
chr4 (181-233)||(33047583-33047635)
chr4 (196-232)||(35029141-35029177)
chr4 (188-231)||(38310326-38310367)
chr4 (195-234)||(38320016-38320056)
chr4 (173-232)||(39052866-39052926)
chr4 (181-233)||(41436572-41436624)
chr4 (195-234)||(42132920-42132960)
chr4 (189-233)||(43421392-43421436)
chr4 (282-338)||(44537387-44537443)
chr4 (195-234)||(49218745-49218785)
chr4 (196-232)||(49401762-49401798)
[»] scaffold0034 (1 HSPs)
scaffold0034 (183-233)||(98918-98968)
[»] chr7 (27 HSPs)
chr7 (181-233)||(45890822-45890874)
chr7 (188-231)||(37490584-37490627)
chr7 (196-233)||(2849361-2849398)
chr7 (188-233)||(44604442-44604487)
chr7 (176-234)||(23111051-23111111)
chr7 (190-232)||(36070205-36070247)
chr7 (196-233)||(5724672-5724709)
chr7 (188-233)||(7425841-7425886)
chr7 (196-233)||(23058924-23058961)
chr7 (196-233)||(30463122-30463159)
chr7 (188-233)||(37157256-37157301)
chr7 (196-233)||(49100467-49100504)
chr7 (201-233)||(1643282-1643314)
chr7 (195-231)||(2842018-2842054)
chr7 (185-233)||(40038073-40038121)
chr7 (189-233)||(40803591-40803635)
chr7 (183-226)||(11616655-11616698)
chr7 (183-233)||(2846640-2846690)
chr7 (188-226)||(8150056-8150094)
chr7 (188-226)||(14648888-14648926)
chr7 (190-234)||(21446536-21446581)
chr7 (196-233)||(26296168-26296205)
chr7 (190-234)||(32971980-32972025)
chr7 (196-233)||(34963772-34963809)
chr7 (190-234)||(47238317-47238362)
chr7 (197-233)||(23186114-23186150)
chr7 (196-232)||(45218123-45218159)
[»] chr1 (49 HSPs)
chr1 (190-233)||(27209932-27209975)
chr1 (190-249)||(16451691-16451747)
chr1 (190-249)||(16460844-16460900)
chr1 (188-233)||(42926232-42926277)
chr1 (196-233)||(49494128-49494165)
chr1 (188-233)||(28908185-28908232)
chr1 (183-234)||(27391440-27391491)
chr1 (190-233)||(46880515-46880558)
chr1 (174-232)||(51049590-51049649)
chr1 (190-232)||(5359246-5359288)
chr1 (183-233)||(28839432-28839482)
chr1 (183-233)||(32348311-32348361)
chr1 (190-232)||(36232755-36232797)
chr1 (183-233)||(49945025-49945075)
chr1 (188-233)||(5442438-5442483)
chr1 (195-232)||(31634261-31634298)
chr1 (188-233)||(32587863-32587908)
chr1 (196-233)||(36467160-36467197)
chr1 (196-233)||(50267403-50267440)
chr1 (188-233)||(51749148-51749193)
chr1 (183-232)||(52432405-52432454)
chr1 (185-233)||(6787342-6787390)
chr1 (183-231)||(8327810-8327858)
chr1 (189-233)||(11324332-11324376)
chr1 (189-233)||(11482353-11482397)
chr1 (197-233)||(34332217-34332253)
chr1 (176-234)||(37541076-37541136)
chr1 (181-233)||(13500692-13500746)
chr1 (196-273)||(36037032-36037111)
chr1 (198-233)||(43895954-43895989)
chr1 (183-233)||(45889212-45889263)
chr1 (201-232)||(52382312-52382343)
chr1 (190-233)||(52830379-52830422)
chr1 (190-232)||(2219414-2219456)
chr1 (198-232)||(21304773-21304807)
chr1 (190-232)||(36326171-36326213)
chr1 (190-233)||(39420686-39420731)
chr1 (194-234)||(26583832-26583873)
chr1 (194-234)||(26760380-26760421)
chr1 (173-232)||(37495911-37495969)
chr1 (183-232)||(40019852-40019901)
chr1 (181-234)||(47479928-47479981)
chr1 (198-226)||(2571469-2571497)
chr1 (181-233)||(3555520-3555572)
chr1 (189-233)||(5040540-5040584)
chr1 (201-233)||(7787797-7787829)
chr1 (197-233)||(10370149-10370185)
chr1 (195-234)||(29756105-29756145)
chr1 (302-342)||(47532364-47532404)
[»] chr3 (35 HSPs)
chr3 (183-233)||(11251091-11251141)
chr3 (188-233)||(2868672-2868717)
chr3 (173-232)||(1334746-1334806)
chr3 (181-233)||(9017892-9017944)
chr3 (181-233)||(53876400-53876452)
chr3 (183-230)||(21296470-21296517)
chr3 (190-232)||(38600771-38600813)
chr3 (188-233)||(15280702-15280747)
chr3 (184-233)||(17274775-17274824)
chr3 (173-233)||(29526071-29526132)
chr3 (188-229)||(33994755-33994796)
chr3 (196-233)||(54783069-54783106)
chr3 (189-233)||(17776958-17777002)
chr3 (189-233)||(19078259-19078303)
chr3 (201-233)||(48409697-48409729)
chr3 (173-232)||(51165034-51165094)
chr3 (185-233)||(54122188-54122236)
chr3 (183-246)||(8706239-8706301)
chr3 (183-246)||(9058126-9058188)
chr3 (188-235)||(51636858-51636905)
chr3 (188-230)||(1772073-1772115)
chr3 (183-233)||(14756078-14756128)
chr3 (183-233)||(26134667-26134717)
chr3 (183-233)||(43639480-43639530)
chr3 (190-232)||(53754029-53754071)
chr3 (190-228)||(54021427-54021465)
chr3 (196-233)||(10855100-10855137)
chr3 (188-233)||(22202331-22202376)
chr3 (196-233)||(32827268-32827305)
chr3 (188-233)||(36097619-36097664)
chr3 (196-233)||(39866517-39866554)
chr3 (196-233)||(54845480-54845517)
chr3 (197-233)||(11529040-11529076)
chr3 (176-234)||(24618890-24618950)
chr3 (197-233)||(39365001-39365037)
[»] scaffold0250 (1 HSPs)
scaffold0250 (195-232)||(20560-20597)
[»] scaffold0227 (1 HSPs)
scaffold0227 (188-233)||(8964-9009)
[»] chr6 (13 HSPs)
chr6 (188-233)||(3604564-3604609)
chr6 (184-233)||(33109467-33109516)
chr6 (176-235)||(15325232-15325292)
chr6 (183-233)||(31265872-31265922)
chr6 (188-232)||(178949-178991)
chr6 (190-231)||(3874016-3874057)
chr6 (196-233)||(15081529-15081566)
chr6 (201-230)||(33017905-33017934)
chr6 (196-232)||(3166073-3166109)
chr6 (186-234)||(7844433-7844481)
chr6 (176-235)||(15351345-15351405)
chr6 (297-333)||(26567005-26567041)
chr6 (188-233)||(34915775-34915822)
[»] scaffold0685 (1 HSPs)
scaffold0685 (190-232)||(6365-6407)
[»] scaffold0028 (1 HSPs)
scaffold0028 (195-233)||(26711-26749)
[»] scaffold0491 (1 HSPs)
scaffold0491 (193-233)||(11800-11841)


Alignment Details
Target: chr2 (Bit Score: 230; Significance: 1e-127; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 127 - 464
Target Start/End: Complemental strand, 14384182 - 14383846
Alignment:
Q  127 tttagattttcaatggaggtaaagtcattgaagagaatcttttccctacttgataaagcatttaaaatcatttttctctctctttcatttatacattttt 226  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||    
T  14384182 tttagattttcaatggtggtaaagtcattgaagagaatcttttccctacttgataaagcattcaaaaccatttttctctctctttcatttatatattttt 14384083  T
Q  227 cttaataatatgtatgaaatggacaaaatatttaattattatgggacggagggggtacaatgttatctttatttcttaatttatatgaaattgttaaaag 326  Q
      |  |||||||||||||||| ||||||| |||||||||||||| ||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||    
T  14384082 tct--taatatgtatgaaatgaacaaaatgtttaattattatggaacggagggggtgcaacgttaactttatttcttaatttatatgaaattgttaaaag 14383985  T
Q  327 gatatatcatttggaaggtcaaatctgctcgatcgtagtattatctcaaatgtggatac--gggttgtctagcagggtgtgcacacatggaaacatctca 424  Q
    ||||||||||||||||||||||||||||| ||||| | |||||||||||| |||||| |  ||||||||||| |||||| ||||| |||||||||| |||    
T  14383984 gatatatcatttggaaggtcaaatctgctggatcgca-tattatctcaaacgtggatgcgggggttgtctagtagggtgcgcacaaatggaaacatatca 14383886  T
Q  425 acatttattcttatcttgtgatttttacggtttgttatgg 464  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  14383885 acatttattcttatcttgtgatttttacggtttgttatgg 14383846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 190 - 232
Target Start/End: Original strand, 7213575 - 7213617
Alignment:
Q  190 aaaatcatttttctctctctttcatttatacatttttcttaat 232  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  7213575 aaaatcatttttctctctatttcatttatacatttttcttaat 7213617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 183 - 233
Target Start/End: Complemental strand, 45464229 - 45464179
Alignment:
Q  183 agcatttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    ||||||||||||||||||| |||||| |||| |||||||||||||||||||    
T  45464229 agcatttaaaatcatttttttctctcattcacttatacatttttcttaata 45464179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 173 - 233
Target Start/End: Original strand, 9724960 - 9725021
Alignment:
Q  173 tacttgataaa-gcatttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    ||||||||||| ||| | |||||||||| ||||||||||||||||||||| |||||||||||    
T  9724960 tacttgataaaagcactcaaaatcatttctctctctctttcatttatacacttttcttaata 9725021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 33755355 - 33755400
Alignment:
Q  188 ttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||    
T  33755355 ttaaaatcatttttctctctccttcatttatacatttgtcttaata 33755400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 36103310 - 36103265
Alignment:
Q  188 ttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||    
T  36103310 ttaaaatcatttttctctctccttcatttgtacatttttcttaata 36103265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 225
Target Start/End: Complemental strand, 734019 - 733984
Alignment:
Q  190 aaaatcatttttctctctctttcatttatacatttt 225  Q
    ||||||||||||||||||||||||||||||||||||    
T  734019 aaaatcatttttctctctctttcatttatacatttt 733984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 183 - 226
Target Start/End: Original strand, 2882078 - 2882121
Alignment:
Q  183 agcatttaaaatcatttttctctctctttcatttatacattttt 226  Q
    |||| |||||||||||||||| ||||||||||||||||||||||    
T  2882078 agcacttaaaatcatttttctatctctttcatttatacattttt 2882121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 185 - 232
Target Start/End: Complemental strand, 10394295 - 10394248
Alignment:
Q  185 catttaaaatcatttttctctctctttcatttatacatttttcttaat 232  Q
    |||||||||| ||||||||||||| ||| |||||||||||||||||||    
T  10394295 catttaaaattatttttctctctccttcttttatacatttttcttaat 10394248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 185 - 232
Target Start/End: Original strand, 28844157 - 28844204
Alignment:
Q  185 catttaaaatcatttttctctctctttcatttatacatttttcttaat 232  Q
    |||| ||||| |||||| ||||||||||||||||||||||||||||||    
T  28844157 cattcaaaattatttttatctctctttcatttatacatttttcttaat 28844204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 232
Target Start/End: Original strand, 18460588 - 18460630
Alignment:
Q  190 aaaatcatttttctctctctttcatttatacatttttcttaat 232  Q
    |||||||||||||| ||||||||||||||||| ||||||||||    
T  18460588 aaaatcatttttctatctctttcatttatacacttttcttaat 18460630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 3199995 - 3200040
Alignment:
Q  190 aaaatcatttttctctctctttcatttatacat-ttttcttaataa 234  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||    
T  3199995 aaaaccatttttctctctctttcatttatacatcttttcttaataa 3200040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 13375197 - 13375152
Alignment:
Q  188 ttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    ||||||| |||| |||||||| ||||||||||||||||||||||||    
T  13375197 ttaaaattatttatctctctccttcatttatacatttttcttaata 13375152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 196 - 233
Target Start/End: Complemental strand, 30757569 - 30757532
Alignment:
Q  196 atttttctctctctttcatttatacatttttcttaata 233  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  30757569 atttttctctctccttcatttatacatttttcttaata 30757532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 196 - 233
Target Start/End: Original strand, 40965120 - 40965157
Alignment:
Q  196 atttttctctctctttcatttatacatttttcttaata 233  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  40965120 atttttctctctccttcatttatacatttttcttaata 40965157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 43950460 - 43950411
Alignment:
Q  185 catttaaaatcatttttctctctctttcatttatacatttttcttaataa 234  Q
    |||||||||  |||||||||||||||||| |||||||||||| |||||||    
T  43950460 catttaaaactatttttctctctctttcacttatacattttttttaataa 43950411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 3123737 - 3123789
Alignment:
Q  181 aaagcatttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||||| ||||||| ||||||||||||  |||| |||||||||||||||||||    
T  3123737 aaagcacttaaaattatttttctctctacttcagttatacatttttcttaata 3123789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 232
Target Start/End: Complemental strand, 6685697 - 6685637
Alignment:
Q  173 tacttgataaag-catttaaaatcatttttctctctctttcatttatacatttttcttaat 232  Q
    ||||||| |||| |||| |||||||||||||||||| ||||||||||| |||||| |||||    
T  6685697 tacttgacaaagacattaaaaatcatttttctctctatttcatttatatattttttttaat 6685637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 188 - 232
Target Start/End: Complemental strand, 10069594 - 10069550
Alignment:
Q  188 ttaaaatcatttttctctctctttcatttatacatttttcttaat 232  Q
    |||||||||||||| ||||||||||| ||||| ||||||||||||    
T  10069594 ttaaaatcatttttatctctctttcacttatatatttttcttaat 10069550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 190 - 226
Target Start/End: Original strand, 10988305 - 10988341
Alignment:
Q  190 aaaatcatttttctctctctttcatttatacattttt 226  Q
    ||||||||||||||||||||||||||||||| |||||    
T  10988305 aaaatcatttttctctctctttcatttatacgttttt 10988341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 43077738 - 43077690
Alignment:
Q  185 catttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||||||||  ||||||||||||| ||||||||||||||| ||||||||    
T  43077738 catttaaaactatttttctctctcattcatttatacatttgtcttaata 43077690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 44534495 - 44534447
Alignment:
Q  185 catttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    ||||||||||||||||| ||| || ||||||||||||||| ||||||||    
T  44534495 catttaaaatcatttttttctgtccttcatttatacatttgtcttaata 44534447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 188 - 231
Target Start/End: Original strand, 565187 - 565230
Alignment:
Q  188 ttaaaatcatttttctctctctttcatttatacatttttcttaa 231  Q
    |||||||||||||||| |||| ||||| ||||||||||||||||    
T  565187 ttaaaatcatttttctttctccttcatatatacatttttcttaa 565230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 234
Target Start/End: Original strand, 2048397 - 2048436
Alignment:
Q  195 catttttctctctctttcatttatacatttttcttaataa 234  Q
    ||||||||||||||||||| |||||||||||| |||||||    
T  2048397 catttttctctctctttcacttatacattttttttaataa 2048436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 183 - 234
Target Start/End: Original strand, 2756767 - 2756818
Alignment:
Q  183 agcatttaaaatcatttttctctctctttcatttatacatttttcttaataa 234  Q
    |||| ||||||| ||||||||||||  |||||| ||||||||||||||||||    
T  2756767 agcacttaaaataatttttctctcttcttcattaatacatttttcttaataa 2756818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 232
Target Start/End: Complemental strand, 18181229 - 18181178
Alignment:
Q  181 aaagcatttaaaatcatttttctctctctttcatttatacatttttcttaat 232  Q
    |||||| |||||| ||||||||||||||| ||| ||||||| ||||||||||    
T  18181229 aaagcacttaaaaccatttttctctctctctcacttatacacttttcttaat 18181178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 269
Target Start/End: Original strand, 19031866 - 19031940
Alignment:
Q  194 tcatttttctctctctttcatttatacatttttcttaataatatgtatgaaatggacaaaatatttaattattatg 269  Q
    |||||||||| ||| ||||||||||| |||||| ||  |||||||| ||||||| |||||| ||||| ||||||||    
T  19031866 tcatttttctttctttttcatttatatattttt-ttcttaatatgtgtgaaatgaacaaaagatttacttattatg 19031940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 221
Target Start/End: Original strand, 21181509 - 21181544
Alignment:
Q  186 atttaaaatcatttttctctctctttcatttataca 221  Q
    |||||||||||||||||||||| |||||||||||||    
T  21181509 atttaaaatcatttttctctctgtttcatttataca 21181544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 188 - 227
Target Start/End: Complemental strand, 24775817 - 24775778
Alignment:
Q  188 ttaaaatcatttttctctctctttcatttatacatttttc 227  Q
    ||||||| ||||||||||||| ||||||||||||||||||    
T  24775817 ttaaaattatttttctctctccttcatttatacatttttc 24775778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 183 - 233
Target Start/End: Original strand, 36155606 - 36155657
Alignment:
Q  183 agcatttaaaatcatttttctctctctttcatttatacatttt-tcttaata 233  Q
    |||| |||||||||||||| |||||| |||||||||||||||| ||||||||    
T  36155606 agcacttaaaatcatttttttctctccttcatttatacattttatcttaata 36155657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 38280203 - 38280160
Alignment:
Q  190 aaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||| ||||||||||||| |||| ||||||||||||||||||||    
T  38280203 aaaaccatttttctctctatttcctttatacatttttcttaata 38280160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 233
Target Start/End: Original strand, 9472527 - 9472565
Alignment:
Q  195 catttttctctctctttcatttatacatttttcttaata 233  Q
    |||| |||| |||||||||||||||||||||||||||||    
T  9472527 cattgttctatctctttcatttatacatttttcttaata 9472565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 233
Target Start/End: Original strand, 28301527 - 28301577
Alignment:
Q  183 agcatttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||| |||||| ||||||||||| || ||||||||||||||| ||||||||    
T  28301527 agcacttaaaaccatttttctctttccttcatttatacatttgtcttaata 28301577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 233
Target Start/End: Original strand, 28527057 - 28527107
Alignment:
Q  183 agcatttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||| |||||| ||||||| | |||| ||||||||||||||||||||||||    
T  28527057 agcacttaaaaccatttttttttctccttcatttatacatttttcttaata 28527107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 190 - 232
Target Start/End: Original strand, 39807313 - 39807355
Alignment:
Q  190 aaaatcatttttctctctctttcatttatacatttttcttaat 232  Q
    |||| ||||||||| ||||||| ||||||||||||||||||||    
T  39807313 aaaaccatttttctttctctttgatttatacatttttcttaat 39807355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 190 - 232
Target Start/End: Original strand, 43182372 - 43182414
Alignment:
Q  190 aaaatcatttttctctctctttcatttatacatttttcttaat 232  Q
    ||||| |||||| |||||||||| |||||||||||||||||||    
T  43182372 aaaattatttttttctctctttcctttatacatttttcttaat 43182414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 233
Target Start/End: Original strand, 44736959 - 44737009
Alignment:
Q  183 agcatttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||| |||||||||||||| |||||| || | |||||||||||||||||||    
T  44736959 agcacttaaaatcatttttatctctcattaacttatacatttttcttaata 44737009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 3100498 - 3100543
Alignment:
Q  188 ttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    ||||||||||||||||||||| |||||||||| |||| | ||||||    
T  3100498 ttaaaatcatttttctctctccttcatttatatatttgttttaata 3100543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 233
Target Start/End: Complemental strand, 28925849 - 28925812
Alignment:
Q  196 atttttctctctctttcatttatacatttttcttaata 233  Q
    ||||||||||||| || |||||||||||||||||||||    
T  28925849 atttttctctctcctttatttatacatttttcttaata 28925812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 232
Target Start/End: Original strand, 33880221 - 33880254
Alignment:
Q  199 tttctctctctttcatttatacatttttcttaat 232  Q
    |||||||||||||||||||| |||||||||||||    
T  33880221 tttctctctctttcatttatgcatttttcttaat 33880254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 188 - 228
Target Start/End: Complemental strand, 8550651 - 8550611
Alignment:
Q  188 ttaaaatcatttttctctctctttcatttatacatttttct 228  Q
    |||||| || |||||||||||||||| ||||||||||||||    
T  8550651 ttaaaaccacttttctctctctttcacttatacatttttct 8550611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 234
Target Start/End: Original strand, 13222173 - 13222213
Alignment:
Q  195 catttttctctctctttcatttataca-tttttcttaataa 234  Q
    ||||||||||||||||||| ||||||| |||||||||||||    
T  13222173 catttttctctctctttcacttatacattttttcttaataa 13222213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 115
Target Start/End: Complemental strand, 14384206 - 14384170
Alignment:
Q  79 caagatagagaaagcattcaatggtttagattttcaa 115  Q
    |||||||||||| ||| ||||||||||||||||||||    
T  14384206 caagatagagaacgcaatcaatggtttagattttcaa 14384170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 5e-23; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 341 - 464
Target Start/End: Complemental strand, 19852755 - 19852632
Alignment:
Q  341 aaggtcaaatctgctcgatcgtagtattatctcaaatgtggatacgggttgtctagcagggtgtgcacacatggaaacatctcaacatttattcttatct 440  Q
    |||||||||||| || ||| | |||||||| ||| | || ||| | | |||||||| ||||||||| || |||||||||||||| |||||||||||||||    
T  19852755 aaggtcaaatcttctggattgcagtattatttcagacgttgatgcagtttgtctagtagggtgtgctcagatggaaacatctcagcatttattcttatct 19852656  T
Q  441 tgtgatttttacggtttgttatgg 464  Q
    |||||||||||||| |||| ||||    
T  19852655 tgtgatttttacggcttgtgatgg 19852632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 181 - 253
Target Start/End: Complemental strand, 39183644 - 39183575
Alignment:
Q  181 aaagcatttaaaatcatttttctctctctttcatttatacatttttcttaataatatgtatgaaatggacaaa 253  Q
    |||||| |||||||||||||| ||||| |||||||||||||||||||||   ||||||| |||||||||||||    
T  39183644 aaagcacttaaaatcatttttatctctttttcatttatacatttttctt---aatatgtgtgaaatggacaaa 39183575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 401 - 464
Target Start/End: Complemental strand, 27297360 - 27297297
Alignment:
Q  401 gtgtgcacacatggaaacatctcaacatttattcttatcttgtgatttttacggtttgttatgg 464  Q
    |||||| || ||||| |||||||| |||||| |||||||||||||||||||||| |||||||||    
T  27297360 gtgtgcccatatggagacatctcagcatttactcttatcttgtgatttttacggcttgttatgg 27297297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 196 - 233
Target Start/End: Complemental strand, 11099479 - 11099442
Alignment:
Q  196 atttttctctctctttcatttatacatttttcttaata 233  Q
    ||||||||||||||||||||||||||||||||||||||    
T  11099479 atttttctctctctttcatttatacatttttcttaata 11099442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 28057843 - 28057798
Alignment:
Q  185 catttaaaatcatttttctctctctttcatttatacatttttctta 230  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||    
T  28057843 catttaaaattatttttctctctccttcatttatacatttttctta 28057798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 183 - 233
Target Start/End: Original strand, 3725279 - 3725329
Alignment:
Q  183 agcatttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||| |||||| |||||||||||||| ||| ||||||||||||||||||||    
T  3725279 agcacttaaaaccatttttctctctccttcctttatacatttttcttaata 3725329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 183 - 233
Target Start/End: Complemental strand, 42575653 - 42575603
Alignment:
Q  183 agcatttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||| |||||| |||||||||||||| ||||||||||||||| ||||||||    
T  42575653 agcacttaaaaccatttttctctctcattcatttatacatttgtcttaata 42575603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 188 - 229
Target Start/End: Original strand, 4412479 - 4412520
Alignment:
Q  188 ttaaaatcatttttctctctctttcatttatacatttttctt 229  Q
    |||| |||||||||||||||| ||||||||||||||||||||    
T  4412479 ttaatatcatttttctctctccttcatttatacatttttctt 4412520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 15814740 - 15814785
Alignment:
Q  188 ttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    ||||||| ||||||||||||| ||||||||||||||||| ||||||    
T  15814740 ttaaaataatttttctctctccttcatttatacattttttttaata 15814785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 198 - 279
Target Start/End: Original strand, 22983050 - 22983130
Alignment:
Q  198 ttttctctctctttcatttatacatttttcttaataatatgtatgaaatggacaaaatatttaattattatgggacggaggg 279  Q
    ||||| |||||||||||||||| |||||| ||  |||||||| ||||||| ||||||| |||| |||  |||||||||||||    
T  22983050 ttttccctctctttcatttatatattttt-ttcttaatatgtgtgaaatgaacaaaatgtttagttaaaatgggacggaggg 22983130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 35646099 - 35646054
Alignment:
Q  188 ttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    ||||||||||||||||||||| |||||||||| |||| ||||||||    
T  35646099 ttaaaatcatttttctctctcattcatttatatatttgtcttaata 35646054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 188 - 232
Target Start/End: Original strand, 6610935 - 6610979
Alignment:
Q  188 ttaaaatcatttttctctctctttcatttatacatttttcttaat 232  Q
    ||||| ||||||||||||||| |||||| ||||||||||||||||    
T  6610935 ttaaactcatttttctctctccttcattgatacatttttcttaat 6610979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 16283600 - 16283552
Alignment:
Q  185 catttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    ||||||||| ||||||| |||||| ||||||||||||||||| ||||||    
T  16283600 catttaaaaccatttttttctctccttcatttatacattttttttaata 16283552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 41594860 - 41594812
Alignment:
Q  185 catttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||||||||| ||||||||||||| |||| ||||| |||||||||||||    
T  41594860 catttaaaattatttttctctctcattcacttatatatttttcttaata 41594812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 17242962 - 17242919
Alignment:
Q  190 aaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||| |||||||||||||| ||||||||||||||| ||||||||    
T  17242962 aaaaccatttttctctctcattcatttatacatttgtcttaata 17242919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 233
Target Start/End: Complemental strand, 22582887 - 22582837
Alignment:
Q  183 agcatttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||| ||||||||||||||||||||  |||||||||| |||| ||||||||    
T  22582887 agcacttaaaatcatttttctctcttattcatttatatatttgtcttaata 22582837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 196 - 230
Target Start/End: Complemental strand, 25344742 - 25344708
Alignment:
Q  196 atttttctctctctttcatttatacatttttctta 230  Q
    |||||||||||||||||| ||||||||||||||||    
T  25344742 atttttctctctctttcacttatacatttttctta 25344708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 233
Target Start/End: Original strand, 39008225 - 39008275
Alignment:
Q  183 agcatttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||| |||||| |||||||||||||| ||||||||||||||| | ||||||    
T  39008225 agcacttaaaaccatttttctctctccttcatttatacatttgttttaata 39008275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 233
Target Start/End: Complemental strand, 42870987 - 42870949
Alignment:
Q  195 catttttctctctctttcatttatacatttttcttaata 233  Q
    |||| ||||||||| ||||||||||||||||||||||||    
T  42870987 cattcttctctctcattcatttatacatttttcttaata 42870949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 858433 - 858478
Alignment:
Q  188 ttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||||| ||||||| |||||| || |||||||||||||||||||||    
T  858433 ttaaaaccatttttttctctcctttatttatacatttttcttaata 858478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 185 - 218
Target Start/End: Original strand, 5816828 - 5816861
Alignment:
Q  185 catttaaaatcatttttctctctctttcatttat 218  Q
    |||||||||||||||||||||||| |||||||||    
T  5816828 catttaaaatcatttttctctctccttcatttat 5816861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 15254863 - 15254908
Alignment:
Q  188 ttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||||||||||||||| | || | ||||||||||||||||||||||    
T  15254863 ttaaaatcatttttctttttcctccatttatacatttttcttaata 15254908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 234
Target Start/End: Complemental strand, 15564901 - 15564856
Alignment:
Q  190 aaaatcatttttctctctctttcatttataca-tttttcttaataa 234  Q
    ||||| |||||||||||||||||| ||||||| |||||||||||||    
T  15564901 aaaattatttttctctctctttcacttatacactttttcttaataa 15564856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 232
Target Start/End: Original strand, 24231108 - 24231150
Alignment:
Q  188 ttaaaatcatttttctctctctttcatttatacatttttcttaat 232  Q
    ||||||||||||||||||||| |||  ||||||||||||||||||    
T  24231108 ttaaaatcatttttctctctcattc--ttatacatttttcttaat 24231150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 233
Target Start/End: Original strand, 25814470 - 25814507
Alignment:
Q  196 atttttctctctctttcatttatacatttttcttaata 233  Q
    ||||||||||||| ||||||||| ||||||||||||||    
T  25814470 atttttctctctccttcatttatgcatttttcttaata 25814507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 31090404 - 31090449
Alignment:
Q  190 aaaatcatttttctctctctttcatttataca-tttttcttaataa 234  Q
    |||||||||||||||||| ||||| ||||||| |||||||||||||    
T  31090404 aaaatcatttttctctctttttcacttatacattttttcttaataa 31090449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 33988298 - 33988343
Alignment:
Q  188 ttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||||| ||||||||| |||| ||||||||||||||| ||||||||    
T  33988298 ttaaaaccatttttctttctccttcatttatacatttgtcttaata 33988343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 36446693 - 36446652
Alignment:
Q  192 aatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||||||||| | |||| ||||||||||||||||||||||||    
T  36446693 aatcatttttttatctccttcatttatacatttttcttaata 36446652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 36469100 - 36469059
Alignment:
Q  192 aatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||||||||| | |||| ||||||||||||||||||||||||    
T  36469100 aatcatttttttatctccttcatttatacatttttcttaata 36469059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 233
Target Start/End: Original strand, 41184766 - 41184803
Alignment:
Q  196 atttttctctctctttcatttatacatttttcttaata 233  Q
    |||||||| |||| ||||||||||||||||||||||||    
T  41184766 atttttctttctccttcatttatacatttttcttaata 41184803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 197 - 233
Target Start/End: Complemental strand, 4576411 - 4576375
Alignment:
Q  197 tttttctctctctttcatttatacatttttcttaata 233  Q
    ||||||||| | |||||||||||||||||||||||||    
T  4576411 tttttctctttttttcatttatacatttttcttaata 4576375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 190 - 226
Target Start/End: Original strand, 17700033 - 17700069
Alignment:
Q  190 aaaatcatttttctctctctttcatttatacattttt 226  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  17700033 aaaatcatttttctctctatttcacttatacattttt 17700069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 190 - 226
Target Start/End: Original strand, 32659915 - 32659951
Alignment:
Q  190 aaaatcatttttctctctctttcatttatacattttt 226  Q
    |||||||||||||| ||||||||||||||||| ||||    
T  32659915 aaaatcatttttctttctctttcatttatacactttt 32659951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 200 - 232
Target Start/End: Complemental strand, 36302081 - 36302049
Alignment:
Q  200 ttctctctctttcatttatacatttttcttaat 232  Q
    |||||||||| ||||||||||||||||||||||    
T  36302081 ttctctctctatcatttatacatttttcttaat 36302049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 8e-22; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 367 - 464
Target Start/End: Original strand, 32644658 - 32644755
Alignment:
Q  367 ttatctcaaatgtggatacgggttgtctagcagggtgtgcacacatggaaacatctcaacatttattcttatcttgtgatttttacggtttgttatgg 464  Q
    |||||||| | |||||| |  |||||||||||||||| ||| |||| || ||||||||||||| |||||||||||||||||||||| |||||||||||    
T  32644658 ttatctcatacgtggatgcatgttgtctagcagggtgcgcatacatagagacatctcaacattgattcttatcttgtgatttttacagtttgttatgg 32644755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 184 - 233
Target Start/End: Original strand, 29615892 - 29615941
Alignment:
Q  184 gcatttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  29615892 gcatttaaaattatttttctctctccttcatttatacatttttcttaata 29615941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 173 - 247
Target Start/End: Original strand, 39998245 - 39998317
Alignment:
Q  173 tacttgataaag-catttaaaatcatttttctctctctttcatttatacatttttcttaataatatgtatgaaatg 247  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||  ||||||||||   ||||||||||||    
T  39998245 tacttgataaagacacttaaaatcatttttctctctctttcatttatactcttttcttaat---atgtatgaaatg 39998317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 4480485 - 4480434
Alignment:
Q  181 aaagcatttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  4480485 aaagtatttaaaat-atttttctctctctttcatttatacatttttcttaata 4480434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 186 - 233
Target Start/End: Original strand, 139118 - 139165
Alignment:
Q  186 atttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||    
T  139118 atttaaaatcatttttatctctcattcatttatacatttttcttaata 139165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 183 - 233
Target Start/End: Original strand, 28802860 - 28802910
Alignment:
Q  183 agcatttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||| |||||| |||||||||||||||||||||||||||||| ||||||||    
T  28802860 agcacttaaaaccatttttctctctctttcatttatacatttgtcttaata 28802910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 22324964 - 22324919
Alignment:
Q  188 ttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||    
T  22324964 ttaaaattatttttctctctccttcatttatacatttttcttaata 22324919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 5392140 - 5392192
Alignment:
Q  181 aaagcatttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||||| |||||| |||||||||||||| ||||||||||||||| ||||||||    
T  5392140 aaagcacttaaaaccatttttctctctccttcatttatacatttgtcttaata 5392192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 40077757 - 40077714
Alignment:
Q  190 aaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||||||||||| ||||||||||||||||||| |||||||||||    
T  40077757 aaaatcatttttttctctctttcatttatacacttttcttaata 40077714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 196 - 233
Target Start/End: Original strand, 26677180 - 26677217
Alignment:
Q  196 atttttctctctctttcatttatacatttttcttaata 233  Q
    |||||||||||||||||| |||||||||||||||||||    
T  26677180 atttttctctctctttcacttatacatttttcttaata 26677217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 32241433 - 32241388
Alignment:
Q  188 ttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||||||||||||| |||||| ||||||||||||||| ||||||||    
T  32241433 ttaaaatcatttttatctctccttcatttatacatttgtcttaata 32241388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 33190918 - 33190873
Alignment:
Q  188 ttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    ||||||||||||||||||||  ||||||||||||||| ||||||||    
T  33190918 ttaaaatcatttttctctcttcttcatttatacatttgtcttaata 33190873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 37219770 - 37219725
Alignment:
Q  188 ttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||||||||| |||||||||| ||||||||||||||| ||||||||    
T  37219770 ttaaaatcatatttctctctccttcatttatacatttgtcttaata 37219725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 37703085 - 37703130
Alignment:
Q  188 ttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||||||||||||||||||| ||||  |||||||||||||||||||    
T  37703085 ttaaaatcatttttctctctttttcgcttatacatttttcttaata 37703130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 184 - 232
Target Start/End: Original strand, 29638395 - 29638443
Alignment:
Q  184 gcatttaaaatcatttttctctctctttcatttatacatttttcttaat 232  Q
    ||||| |||| ||||||||||| ||||||||||||||| ||||||||||    
T  29638395 gcattcaaaaccatttttctctttctttcatttatacacttttcttaat 29638443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 195 - 234
Target Start/End: Original strand, 33743881 - 33743921
Alignment:
Q  195 catttttctctctctttcatttataca-tttttcttaataa 234  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  33743881 catttttctctctctttcatttatacactttttcttaataa 33743921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 197 - 233
Target Start/End: Complemental strand, 38252437 - 38252401
Alignment:
Q  197 tttttctctctctttcatttatacatttttcttaata 233  Q
    |||||||||||| ||||||||||||||||||||||||    
T  38252437 tttttctctctccttcatttatacatttttcttaata 38252401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 5423171 - 5423128
Alignment:
Q  190 aaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||||||||||||||||||||||| |||| ||||| ||||||||    
T  5423171 aaaatcatttttctctctctttcacttatgcatttatcttaata 5423128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 232
Target Start/End: Complemental strand, 5878252 - 5878190
Alignment:
Q  173 tacttgataaag-catttaaaatcatttttctctctct--ttcatttatacatttttcttaat 232  Q
    ||||||| |||| ||||||||| |||||||||||||||  |||||||||||| ||||||||||    
T  5878252 tacttgacaaagacatttaaaaccatttttctctctctctttcatttatacacttttcttaat 5878190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 233
Target Start/End: Original strand, 3384630 - 3384679
Alignment:
Q  186 atttaaaatcatttttctctctctt--tcatttatacatttttcttaata 233  Q
    |||||| | ||||||||||||||||  |||||||||||||||||||||||    
T  3384630 atttaataccatttttctctctcttcttcatttatacatttttcttaata 3384679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 231
Target Start/End: Complemental strand, 4274315 - 4274265
Alignment:
Q  181 aaagcatttaaaatcatttttctctctctttcatttatacatttttcttaa 231  Q
    |||||| ||||||| ||||||||||||  ||||||||||||||| ||||||    
T  4274315 aaagcacttaaaattatttttctctcttcttcatttatacatttgtcttaa 4274265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 188 - 234
Target Start/End: Complemental strand, 15559139 - 15559093
Alignment:
Q  188 ttaaaatcatttttctctctctttcatttatacatttttcttaataa 234  Q
    |||||||||||||| |||||| |||| | ||||||||||||||||||    
T  15559139 ttaaaatcatttttgtctctccttcactaatacatttttcttaataa 15559093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 233
Target Start/End: Complemental strand, 42412397 - 42412347
Alignment:
Q  183 agcatttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||| ||||||  ||||||||||||| |||| |||||||||||||||||||    
T  42412397 agcacttaaaactatttttctctctcattcacttatacatttttcttaata 42412347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 233
Target Start/End: Original strand, 12653793 - 12653830
Alignment:
Q  196 atttttctctctctttcatttatacatttttcttaata 233  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  12653793 atttttctctctacttcatttatacatttttcttaata 12653830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 14690060 - 14690105
Alignment:
Q  190 aaaatcatttttctctctctttcatttataca-tttttcttaataa 234  Q
    |||| ||||||||||||||||||| ||||||| |||||||||||||    
T  14690060 aaaaccatttttctctctctttcacttatacactttttcttaataa 14690105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 33746228 - 33746183
Alignment:
Q  188 ttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    ||||||| |||||||| | |||||||||||||||||||| ||||||    
T  33746228 ttaaaattatttttctttttctttcatttatacattttttttaata 33746183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 234
Target Start/End: Original strand, 37459444 - 37459485
Alignment:
Q  193 atcatttttctctctctttcatttatacatttttcttaataa 234  Q
    ||||||||| ||||| ||||||||||||| ||||||||||||    
T  37459444 atcatttttttctctttttcatttatacacttttcttaataa 37459485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 233
Target Start/End: Complemental strand, 44790423 - 44790386
Alignment:
Q  196 atttttctctctctttcatttatacatttttcttaata 233  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  44790423 atttttctctctccttcatttatacatttgtcttaata 44790386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 197 - 233
Target Start/End: Original strand, 2349458 - 2349494
Alignment:
Q  197 tttttctctctctttcatttatacatttttcttaata 233  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  2349458 tttttctctctccttcatttatacattttttttaata 2349494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 9014794 - 9014838
Alignment:
Q  181 aaagcatttaaaatcatttttctctctctttcatttatacatttt 225  Q
    |||||| ||||||||||||||||||||  |||||||||| |||||    
T  9014794 aaagcacttaaaatcatttttctctcttcttcatttatatatttt 9014838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 22490492 - 22490524
Alignment:
Q  201 tctctctctttcatttatacatttttcttaata 233  Q
    |||||||| ||||||||||||||||||||||||    
T  22490492 tctctctccttcatttatacatttttcttaata 22490524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 234
Target Start/End: Complemental strand, 45420941 - 45420901
Alignment:
Q  195 catttttctctctctttcatttataca-tttttcttaataa 234  Q
    ||||||||||||||||||| ||||||| |||||||||||||    
T  45420941 catttttctctctctttcacttatacactttttcttaataa 45420901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 8e-19; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 173 - 232
Target Start/End: Complemental strand, 48400656 - 48400596
Alignment:
Q  173 tacttgataaa-gcatttaaaatcatttttctctctctttcatttatacatttttcttaat 232  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  48400656 tacttgataaaagcattaaaaatcatttttctctctctttcatttatacatttttcttaat 48400596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 173 - 233
Target Start/End: Complemental strand, 34790976 - 34790915
Alignment:
Q  173 tacttgataaa-gcatttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    ||||||||||| ||| | ||||||||||||||||| |||||||||||||| |||||||||||    
T  34790976 tacttgataaaagcactcaaaatcatttttctctcactttcatttatacacttttcttaata 34790915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 196 - 232
Target Start/End: Original strand, 8295135 - 8295171
Alignment:
Q  196 atttttctctctctttcatttatacatttttcttaat 232  Q
    |||||||||||||||||||||||||||||||||||||    
T  8295135 atttttctctctctttcatttatacatttttcttaat 8295171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 183 - 231
Target Start/End: Original strand, 49306680 - 49306728
Alignment:
Q  183 agcatttaaaatcatttttctctctctttcatttatacatttttcttaa 231  Q
    |||| |||||| |||||||||||||||||||||||||||||| ||||||    
T  49306680 agcacttaaaaccatttttctctctctttcatttatacatttgtcttaa 49306728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 183 - 233
Target Start/End: Complemental strand, 42185810 - 42185760
Alignment:
Q  183 agcatttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||| |||||||||||||||| |||| ||||||||||||||| ||||||||    
T  42185810 agcacttaaaatcatttttctatctccttcatttatacatttgtcttaata 42185760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 183 - 233
Target Start/End: Original strand, 49448934 - 49448984
Alignment:
Q  183 agcatttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||| |||||| |||||||||||||| |||| |||||||||||||||||||    
T  49448934 agcacttaaaaccatttttctctctccttcacttatacatttttcttaata 49448984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 4357665 - 4357710
Alignment:
Q  188 ttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||||||||| |||||||||| |||||||||| |||||||||||||    
T  4357665 ttaaaatcatctttctctctccttcatttatatatttttcttaata 4357710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 42024210 - 42024165
Alignment:
Q  188 ttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||||| |||||||||||||| ||||||||||||||| ||||||||    
T  42024210 ttaaaaccatttttctctctccttcatttatacatttgtcttaata 42024165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 196 - 233
Target Start/End: Original strand, 42367895 - 42367932
Alignment:
Q  196 atttttctctctctttcatttatacatttttcttaata 233  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  42367895 atttttctctctcattcatttatacatttttcttaata 42367932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 44020777 - 44020732
Alignment:
Q  189 taaaatcatttttctctctctttcatttatacatttttcttaataa 234  Q
    |||||| |||||| |||||| |||||||||||||||||||||||||    
T  44020777 taaaattatttttttctctccttcatttatacatttttcttaataa 44020732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 196 - 229
Target Start/End: Complemental strand, 54729485 - 54729452
Alignment:
Q  196 atttttctctctctttcatttatacatttttctt 229  Q
    ||||||||||||||||||||||||||||||||||    
T  54729485 atttttctctctctttcatttatacatttttctt 54729452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 4360424 - 4360372
Alignment:
Q  181 aaagcatttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||||| |||||| ||||||||||| || ||||||||||| ||||||||||||    
T  4360424 aaagcacttaaaaccatttttctctttcattcatttatacttttttcttaata 4360372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 195 - 253
Target Start/End: Original strand, 12619792 - 12619847
Alignment:
Q  195 catttttctctctctttcatttatacatttttcttaataatatgtatgaaatggacaaa 253  Q
    |||||||||| |||||||| ||||||||||||||||||||   |||||||||| |||||    
T  12619792 catttttctcgctctttcacttatacatttttcttaataa---gtatgaaatgaacaaa 12619847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 196 - 232
Target Start/End: Complemental strand, 29550728 - 29550692
Alignment:
Q  196 atttttctctctctttcatttatacatttttcttaat 232  Q
    ||||||||||||||||| |||||||||||||||||||    
T  29550728 atttttctctctctttcctttatacatttttcttaat 29550692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 229
Target Start/End: Original strand, 26185278 - 26185321
Alignment:
Q  186 atttaaaatcatttttctctctctttcatttatacatttttctt 229  Q
    |||||||| |||||||||||||| ||||||||||||||| ||||    
T  26185278 atttaaaaccatttttctctctccttcatttatacatttgtctt 26185321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 41203837 - 41203880
Alignment:
Q  190 aaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||| ||||||||| |||| ||||||||||||||||||||||||    
T  41203837 aaaaccatttttctatctccttcatttatacatttttcttaata 41203880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 52677045 - 52676994
Alignment:
Q  183 agcatttaaaatcatttttctctctctttcatttatacatttttcttaataa 234  Q
    |||| |||||||||||||||||| || |||| | ||||||||||||||||||    
T  52677045 agcacttaaaatcatttttctctttcattcactaatacatttttcttaataa 52676994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 233
Target Start/End: Complemental strand, 22872400 - 22872350
Alignment:
Q  183 agcatttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||| |||||| |||||||||||||  |||| |||||||||||||||||||    
T  22872400 agcacttaaaaccatttttctctcttcttcacttatacatttttcttaata 22872350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 191 - 233
Target Start/End: Complemental strand, 27655310 - 27655268
Alignment:
Q  191 aaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||| ||||||||||||| ||||||||||||||| ||||||||    
T  27655310 aaattatttttctctctccttcatttatacatttgtcttaata 27655268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 190 - 232
Target Start/End: Complemental strand, 42051663 - 42051621
Alignment:
Q  190 aaaatcatttttctctctctttcatttatacatttttcttaat 232  Q
    |||| ||||||||| ||||||||||||||||| ||||||||||    
T  42051663 aaaaccatttttctatctctttcatttatacacttttcttaat 42051621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 3503075 - 3503030
Alignment:
Q  181 aaagcatttaaaatcatttttctctctctttcatttatacattttt 226  Q
    |||||| | |||||||||||||||| ||||||| ||||||||||||    
T  3503075 aaagcactcaaaatcatttttctctttctttcacttatacattttt 3503030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 191 - 232
Target Start/End: Original strand, 4727621 - 4727662
Alignment:
Q  191 aaatcatttttctctctctttcatttatacatttttcttaat 232  Q
    |||||||||||||||||| |||| ||||| ||||||||||||    
T  4727621 aaatcatttttctctctccttcaattatatatttttcttaat 4727662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 16493307 - 16493262
Alignment:
Q  188 ttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||||| ||||||| ||||||||| |||||||||||| ||||||||    
T  16493307 ttaaaaccatttttttctctcttttatttatacatttatcttaata 16493262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 233
Target Start/End: Original strand, 17237149 - 17237186
Alignment:
Q  196 atttttctctctctttcatttatacatttttcttaata 233  Q
    ||||||||||||| |||||||||| |||||||||||||    
T  17237149 atttttctctctccttcatttatatatttttcttaata 17237186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 234
Target Start/End: Complemental strand, 20964291 - 20964250
Alignment:
Q  194 tcatttttctctctctttcatttataca-tttttcttaataa 234  Q
    |||||||||||||||||||| ||||||| |||||||||||||    
T  20964291 tcatttttctctctctttcacttatacactttttcttaataa 20964250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 27977245 - 27977290
Alignment:
Q  188 ttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    ||||||||||||||| ||||  || |||||||||||||||||||||    
T  27977245 ttaaaatcatttttcactctaatttatttatacatttttcttaata 27977290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 30568761 - 30568806
Alignment:
Q  188 ttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||||| ||||||||||| || ||| ||||||||||||||||||||    
T  30568761 ttaaaaccatttttctctttccttcctttatacatttttcttaata 30568806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 35909582 - 35909537
Alignment:
Q  188 ttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    ||||||| |||||| ||| || ||||||||||||||||||||||||    
T  35909582 ttaaaattatttttatctttcattcatttatacatttttcttaata 35909537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 37309796 - 37309841
Alignment:
Q  188 ttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    ||||| ||||||||||||||| || |||||| ||||||||||||||    
T  37309796 ttaaagtcatttttctctctcatttatttatgcatttttcttaata 37309841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 233
Target Start/End: Complemental strand, 38160153 - 38160116
Alignment:
Q  196 atttttctctctctttcatttatacatttttcttaata 233  Q
    ||||||||||||| || |||||||||||||||||||||    
T  38160153 atttttctctctcctttatttatacatttttcttaata 38160116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 233
Target Start/End: Original strand, 38977098 - 38977135
Alignment:
Q  196 atttttctctctctttcatttatacatttttcttaata 233  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  38977098 atttttctctcttcttcatttatacatttttcttaata 38977135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 233
Target Start/End: Complemental strand, 42670384 - 42670347
Alignment:
Q  196 atttttctctctctttcatttatacatttttcttaata 233  Q
    ||||||||||||| || |||||||||||||||||||||    
T  42670384 atttttctctctcatttatttatacatttttcttaata 42670347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 51076416 - 51076375
Alignment:
Q  192 aatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||||||| ||||||| |||||| ||||||||||||||||||    
T  51076416 aatcatttctctctctttttcatatatacatttttcttaata 51076375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 2906758 - 2906806
Alignment:
Q  185 catttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    ||||||||| |||||||| ||||| ||||||||||||| ||| ||||||    
T  2906758 catttaaaaccatttttcactctcattcatttatacatattttttaata 2906806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 8065652 - 8065684
Alignment:
Q  201 tctctctctttcatttatacatttttcttaata 233  Q
    |||||||| ||||||||||||||||||||||||    
T  8065652 tctctctccttcatttatacatttttcttaata 8065684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 234
Target Start/End: Original strand, 8759884 - 8759924
Alignment:
Q  195 catttttctctctctttcatttataca-tttttcttaataa 234  Q
    ||||||||||||||||||||||||||| ||||| |||||||    
T  8759884 catttttctctctctttcatttatacacttttttttaataa 8759924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 9051989 - 9051941
Alignment:
Q  185 catttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||| |||||||||||||||| ||||  ||||||| |||||||||||||    
T  9051989 cattcaaaatcatttttctctttcttatatttatatatttttcttaata 9051941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 11469940 - 11469972
Alignment:
Q  201 tctctctctttcatttatacatttttcttaata 233  Q
    ||||||||||||||||||||| |||||||||||    
T  11469940 tctctctctttcatttatacaattttcttaata 11469972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 11521521 - 11521489
Alignment:
Q  201 tctctctctttcatttatacatttttcttaata 233  Q
    ||||||||||||||||||||| |||||||||||    
T  11521521 tctctctctttcatttatacaattttcttaata 11521489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 234
Target Start/End: Original strand, 28330899 - 28330939
Alignment:
Q  195 catttttctctctctttcatttataca-tttttcttaataa 234  Q
    ||||||||||||||||||| ||||||| |||||||||||||    
T  28330899 catttttctctctctttcacttatacactttttcttaataa 28330939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 199 - 231
Target Start/End: Original strand, 29645055 - 29645087
Alignment:
Q  199 tttctctctctttcatttatacatttttcttaa 231  Q
    |||||||||| ||||||||||||||||||||||    
T  29645055 tttctctctcattcatttatacatttttcttaa 29645087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 33047583 - 33047635
Alignment:
Q  181 aaagcatttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||||| |||||| |||||||||||||  ||  ||||||||||||||||||||    
T  33047583 aaagcacttaaaaccatttttctctcttctttgtttatacatttttcttaata 33047635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 196 - 232
Target Start/End: Original strand, 35029141 - 35029177
Alignment:
Q  196 atttttctctctctttcatttatacatttttcttaat 232  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  35029141 atttttctctctttttcatttatacacttttcttaat 35029177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 188 - 231
Target Start/End: Complemental strand, 38310367 - 38310326
Alignment:
Q  188 ttaaaatcatttttctctctctttcatttatacatttttcttaa 231  Q
    ||||||||||||||||||||  |||| |||||||||||||||||    
T  38310367 ttaaaatcatttttctctct--ttcacttatacatttttcttaa 38310326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 234
Target Start/End: Original strand, 38320016 - 38320056
Alignment:
Q  195 catttttctctctctttcatttataca-tttttcttaataa 234  Q
    ||||||||||||||||||| ||||||| |||||||||||||    
T  38320016 catttttctctctctttcacttatacactttttcttaataa 38320056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 173 - 232
Target Start/End: Complemental strand, 39052926 - 39052866
Alignment:
Q  173 tacttgataaag-catttaaaatcatttttctctctctttcatttatacatttttcttaat 232  Q
    |||||||||||| || | ||| || ||||| | ||||||||||||||||||||||||||||    
T  39052926 tacttgataaagacactcaaattcttttttttttctctttcatttatacatttttcttaat 39052866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 41436572 - 41436624
Alignment:
Q  181 aaagcatttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||||| |||||| ||||||| ||||||| ||| ||||||| |||||||||||    
T  41436572 aaagcacttaaaaccatttttttctctctctcacttatacacttttcttaata 41436624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 234
Target Start/End: Original strand, 42132920 - 42132960
Alignment:
Q  195 catttttctctctctttcatttataca-tttttcttaataa 234  Q
    ||||||||||||||||||| ||||||| |||||||||||||    
T  42132920 catttttctctctctttcacttatacactttttcttaataa 42132960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 43421392 - 43421436
Alignment:
Q  189 taaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||||||||| ||||||||  ||||||||||||||| ||||||||    
T  43421392 taaaatcattgttctctcttcttcatttatacatttatcttaata 43421436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 282 - 338
Target Start/End: Original strand, 44537387 - 44537443
Alignment:
Q  282 tacaatgttatctttatttcttaatttatatgaaattgttaaaaggatatatcattt 338  Q
    |||||| ||| |||||||| ||||||||| |||||||||||||  ||||||| ||||    
T  44537387 tacaatattaactttattttttaatttatgtgaaattgttaaagtgatatataattt 44537443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 234
Target Start/End: Complemental strand, 49218785 - 49218745
Alignment:
Q  195 catttttctctctctttcatttataca-tttttcttaataa 234  Q
    ||||||||||||||||||| ||||||| |||||||||||||    
T  49218785 catttttctctctctttcacttatacactttttcttaataa 49218745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 196 - 232
Target Start/End: Original strand, 49401762 - 49401798
Alignment:
Q  196 atttttctctctctttcatttatacatttttcttaat 232  Q
    ||||||||||||||||  |||||||||||||||||||    
T  49401762 atttttctctctctttactttatacatttttcttaat 49401798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 183 - 233
Target Start/End: Original strand, 98918 - 98968
Alignment:
Q  183 agcatttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  98918 agcacttaaaatcatttttctctctcattcatttatacatttttcttaata 98968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 45890874 - 45890822
Alignment:
Q  181 aaagcatttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    ||||||||||||| |||||||||||||| ||| ||||||||||||||||||||    
T  45890874 aaagcatttaaaaccatttttctctctccttcttttatacatttttcttaata 45890822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 188 - 231
Target Start/End: Complemental strand, 37490627 - 37490584
Alignment:
Q  188 ttaaaatcatttttctctctctttcatttatacatttttcttaa 231  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  37490627 ttaaaatcatttttctctctccttcatttatacatttttcttaa 37490584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 196 - 233
Target Start/End: Original strand, 2849361 - 2849398
Alignment:
Q  196 atttttctctctctttcatttatacatttttcttaata 233  Q
    ||||||||||||||||||||||||||||||||||||||    
T  2849361 atttttctctctctttcatttatacatttttcttaata 2849398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 44604487 - 44604442
Alignment:
Q  188 ttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||    
T  44604487 ttaaaatcatttttctctctccttcatttatacatttgtcttaata 44604442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 176 - 234
Target Start/End: Complemental strand, 23111111 - 23111051
Alignment:
Q  176 ttgataaag-catttaaaatcatttttctctctctttcatttatacat-ttttcttaataa 234  Q
    ||||||||| |||| |||||||||||||||||| |||||||||||||| ||||||||||||    
T  23111111 ttgataaagacattcaaaatcatttttctctctatttcatttatacattttttcttaataa 23111051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 232
Target Start/End: Original strand, 36070205 - 36070247
Alignment:
Q  190 aaaatcatttttctctctctttcatttatacatttttcttaat 232  Q
    |||| |||||| |||||||||||||||||||||||||||||||    
T  36070205 aaaaccattttcctctctctttcatttatacatttttcttaat 36070247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 196 - 233
Target Start/End: Complemental strand, 5724709 - 5724672
Alignment:
Q  196 atttttctctctctttcatttatacatttttcttaata 233  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  5724709 atttttctctctccttcatttatacatttttcttaata 5724672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 7425886 - 7425841
Alignment:
Q  188 ttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||||| |||||||||||||| ||||||||||||||| ||||||||    
T  7425886 ttaaaaccatttttctctctcattcatttatacatttgtcttaata 7425841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 196 - 233
Target Start/End: Original strand, 23058924 - 23058961
Alignment:
Q  196 atttttctctctctttcatttatacatttttcttaata 233  Q
    |||||||||||||||||||||||| |||||||||||||    
T  23058924 atttttctctctctttcatttatatatttttcttaata 23058961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 196 - 233
Target Start/End: Original strand, 30463122 - 30463159
Alignment:
Q  196 atttttctctctctttcatttatacatttttcttaata 233  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  30463122 atttttctctctcattcatttatacatttttcttaata 30463159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 37157256 - 37157301
Alignment:
Q  188 ttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    ||||||| ||||||||||||| ||||| ||||||||||||||||||    
T  37157256 ttaaaattatttttctctctccttcatctatacatttttcttaata 37157301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 196 - 233
Target Start/End: Complemental strand, 49100504 - 49100467
Alignment:
Q  196 atttttctctctctttcatttatacatttttcttaata 233  Q
    |||||||||| |||||||||||||||||||||||||||    
T  49100504 atttttctctgtctttcatttatacatttttcttaata 49100467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 1643314 - 1643282
Alignment:
Q  201 tctctctctttcatttatacatttttcttaata 233  Q
    |||||||||||||||||||||||||||||||||    
T  1643314 tctctctctttcatttatacatttttcttaata 1643282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 195 - 231
Target Start/End: Complemental strand, 2842054 - 2842018
Alignment:
Q  195 catttttctctctctttcatttatacatttttcttaa 231  Q
    |||||||||||||| ||||||||||||||||||||||    
T  2842054 catttttctctctccttcatttatacatttttcttaa 2842018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 40038121 - 40038073
Alignment:
Q  185 catttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||||||||| |||||||||| || ||||||||||||||| ||||||||    
T  40038121 catttaaaattatttttctctttccttcatttatacatttatcttaata 40038073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 40803635 - 40803591
Alignment:
Q  189 taaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||||| ||||||||||||| |||||||||| |||||||||||||    
T  40803635 taaaattatttttctctctccttcatttataaatttttcttaata 40803591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 183 - 226
Target Start/End: Original strand, 11616655 - 11616698
Alignment:
Q  183 agcatttaaaatcatttttctctctctttcatttatacattttt 226  Q
    |||| |||||| |||||||||||||| |||||||||||||||||    
T  11616655 agcacttaaaaccatttttctctctccttcatttatacattttt 11616698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 233
Target Start/End: Complemental strand, 2846690 - 2846640
Alignment:
Q  183 agcatttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||| ||||||  ||||||||||||| ||||||||||||||| ||||||||    
T  2846690 agcacttaaaactatttttctctctcgttcatttatacatttgtcttaata 2846640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 188 - 226
Target Start/End: Original strand, 8150056 - 8150094
Alignment:
Q  188 ttaaaatcatttttctctctctttcatttatacattttt 226  Q
    |||||| ||||||||||||||||||| ||||||||||||    
T  8150056 ttaaaaccatttttctctctctttcacttatacattttt 8150094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 188 - 226
Target Start/End: Complemental strand, 14648926 - 14648888
Alignment:
Q  188 ttaaaatcatttttctctctctttcatttatacattttt 226  Q
    |||||||||||||||||| ||||||| ||||||||||||    
T  14648926 ttaaaatcatttttctctttctttcacttatacattttt 14648888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 21446536 - 21446581
Alignment:
Q  190 aaaatcatttttctctctctttcatttatac-atttttcttaataa 234  Q
    ||||| |||||||||||||||||| |||||| ||||||||||||||    
T  21446536 aaaattatttttctctctctttcacttatacaatttttcttaataa 21446581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 233
Target Start/End: Complemental strand, 26296205 - 26296168
Alignment:
Q  196 atttttctctctctttcatttatacatttttcttaata 233  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  26296205 atttttctctctaattcatttatacatttttcttaata 26296168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 234
Target Start/End: Complemental strand, 32972025 - 32971980
Alignment:
Q  190 aaaatcatttttctctctctttcatttatacat-ttttcttaataa 234  Q
    |||| ||||||||||||||||||| |||||||| ||||||||||||    
T  32972025 aaaaccatttttctctctctttcacttatacattttttcttaataa 32971980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 233
Target Start/End: Complemental strand, 34963809 - 34963772
Alignment:
Q  196 atttttctctctctttcatttatacatttttcttaata 233  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  34963809 atttttctccctctatcatttatacatttttcttaata 34963772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 47238317 - 47238362
Alignment:
Q  190 aaaatcatttttctctctctttcatttataca-tttttcttaataa 234  Q
    |||| ||||||||||||||||||| ||||||| |||||||||||||    
T  47238317 aaaaccatttttctctctctttcacttatacactttttcttaataa 47238362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 197 - 233
Target Start/End: Complemental strand, 23186150 - 23186114
Alignment:
Q  197 tttttctctctctttcatttatacatttttcttaata 233  Q
    |||||||||||| |||||||||| |||||||||||||    
T  23186150 tttttctctctccttcatttatatatttttcttaata 23186114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 196 - 232
Target Start/End: Complemental strand, 45218159 - 45218123
Alignment:
Q  196 atttttctctctctttcatttatacatttttcttaat 232  Q
    ||||||||||||||||| |||||||| ||||||||||    
T  45218159 atttttctctctctttcctttatacacttttcttaat 45218123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 27209975 - 27209932
Alignment:
Q  190 aaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  27209975 aaaatcatttttctctctctttcatttatacacttttcttaata 27209932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 16451691 - 16451747
Alignment:
Q  190 aaaatcatttttctctctctttcatttatacatttttcttaataatatgtatgaaatgga 249  Q
    |||| |||||||||||||||||| |||||||||||||||   ||||||||||||||||||    
T  16451691 aaaaccatttttctctctctttcctttatacatttttct---taatatgtatgaaatgga 16451747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 16460844 - 16460900
Alignment:
Q  190 aaaatcatttttctctctctttcatttatacatttttcttaataatatgtatgaaatgga 249  Q
    |||| |||||||||||||||||| |||||||||||||||   ||||||||||||||||||    
T  16460844 aaaaccatttttctctctctttcctttatacatttttct---taatatgtatgaaatgga 16460900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 42926232 - 42926277
Alignment:
Q  188 ttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||||||||||||||||| || ||||||||||||||||||||||||    
T  42926232 ttaaaatcatttttctctttcattcatttatacatttttcttaata 42926277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 196 - 233
Target Start/End: Complemental strand, 49494165 - 49494128
Alignment:
Q  196 atttttctctctctttcatttatacatttttcttaata 233  Q
    ||||||||||||||||||||||||||||||||||||||    
T  49494165 atttttctctctctttcatttatacatttttcttaata 49494128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 28908185 - 28908232
Alignment:
Q  188 ttaaaatcatttttctctctct--ttcatttatacatttttcttaata 233  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||    
T  28908185 ttaaaatcatttttctctctctccttcatttatacatttttcttaata 28908232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 183 - 234
Target Start/End: Original strand, 27391440 - 27391491
Alignment:
Q  183 agcatttaaaatcatttttctctctctttcatttatacatttttcttaataa 234  Q
    |||| ||||||||||||||||||||| |||| ||||||||||||| ||||||    
T  27391440 agcacttaaaatcatttttctctctccttcacttatacatttttcgtaataa 27391491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 46880515 - 46880558
Alignment:
Q  190 aaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  46880515 aaaatcatttttctctctccttcatttatacaattttcttaata 46880558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 51049590 - 51049649
Alignment:
Q  174 acttgataaag-catttaaaatcatttttctctctctttcatttatacatttttcttaat 232  Q
    ||||||||||| |||| |||| ||||||||||||||||| ||||||||| ||||||||||    
T  51049590 acttgataaagacattcaaaaccatttttctctctcttttatttatacacttttcttaat 51049649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 232
Target Start/End: Complemental strand, 5359288 - 5359246
Alignment:
Q  190 aaaatcatttttctctctctttcatttatacatttttcttaat 232  Q
    |||||||||||||||||||||| ||||||||| ||||||||||    
T  5359288 aaaatcatttttctctctcttttatttatacacttttcttaat 5359246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 183 - 233
Target Start/End: Original strand, 28839432 - 28839482
Alignment:
Q  183 agcatttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||||||||||  ||||||||||||| ||||||||||||||| ||||||||    
T  28839432 agcatttaaaactatttttctctctccttcatttatacatttgtcttaata 28839482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 183 - 233
Target Start/End: Original strand, 32348311 - 32348361
Alignment:
Q  183 agcatttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||| |||||| |||||||||||||| ||||||||||||||| ||||||||    
T  32348311 agcacttaaaaccatttttctctctccttcatttatacatttgtcttaata 32348361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 232
Target Start/End: Complemental strand, 36232797 - 36232755
Alignment:
Q  190 aaaatcatttttctctctctttcatttatacatttttcttaat 232  Q
    ||||||||||||||||||||||| |||||||| ||||||||||    
T  36232797 aaaatcatttttctctctctttcgtttatacacttttcttaat 36232755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 183 - 233
Target Start/End: Original strand, 49945025 - 49945075
Alignment:
Q  183 agcatttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||| |||||| |||||||||||||  ||||||||||||||||||||||||    
T  49945025 agcacttaaaaccatttttctctcttcttcatttatacatttttcttaata 49945075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 5442438 - 5442483
Alignment:
Q  188 ttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||||| |||||||||||||| ||||||||||||||| ||||||||    
T  5442438 ttaaaaccatttttctctctcattcatttatacatttgtcttaata 5442483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 31634298 - 31634261
Alignment:
Q  195 catttttctctctctttcatttatacatttttcttaat 232  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  31634298 catttttctctctcttttatttatacatttttcttaat 31634261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 32587863 - 32587908
Alignment:
Q  188 ttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    ||||||| ||||||||||| | ||||||||||||||||||||||||    
T  32587863 ttaaaattatttttctctcaccttcatttatacatttttcttaata 32587908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 196 - 233
Target Start/End: Complemental strand, 36467197 - 36467160
Alignment:
Q  196 atttttctctctctttcatttatacatttttcttaata 233  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  36467197 atttttctctctcattcatttatacatttttcttaata 36467160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 196 - 233
Target Start/End: Complemental strand, 50267440 - 50267403
Alignment:
Q  196 atttttctctctctttcatttatacatttttcttaata 233  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  50267440 atttttctctcactttcatttatacatttttcttaata 50267403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 51749193 - 51749148
Alignment:
Q  188 ttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    ||||||||| ||||||||||| ||||||||||||||| ||||||||    
T  51749193 ttaaaatcagttttctctctccttcatttatacatttatcttaata 51749148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 183 - 232
Target Start/End: Original strand, 52432405 - 52432454
Alignment:
Q  183 agcatttaaaatcatttttctctctctttcatttatacatttttcttaat 232  Q
    |||| ||||||||||||||||||||  ||||||||||||||| |||||||    
T  52432405 agcacttaaaatcatttttctctcttcttcatttatacatttgtcttaat 52432454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 6787342 - 6787390
Alignment:
Q  185 catttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||||||||  ||||||||||||||||| |||||| |||||||||||||    
T  6787342 catttaaaactatttttctctctctttcgtttatatatttttcttaata 6787390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 183 - 231
Target Start/End: Original strand, 8327810 - 8327858
Alignment:
Q  183 agcatttaaaatcatttttctctctctttcatttatacatttttcttaa 231  Q
    |||| ||||||| ||||||||||||| ||||||||||||||| ||||||    
T  8327810 agcacttaaaattatttttctctctcattcatttatacatttgtcttaa 8327858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 11324332 - 11324376
Alignment:
Q  189 taaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    ||||| |||| ||||||||| ||||||||||||||||||||||||    
T  11324332 taaaaccattattctctctcattcatttatacatttttcttaata 11324376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 11482353 - 11482397
Alignment:
Q  189 taaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    ||||| |||| ||||||||| ||||||||||||||||||||||||    
T  11482353 taaaaccattattctctctcattcatttatacatttttcttaata 11482397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 197 - 233
Target Start/End: Original strand, 34332217 - 34332253
Alignment:
Q  197 tttttctctctctttcatttatacatttttcttaata 233  Q
    ||||||||||||||||| |||||||||||||||||||    
T  34332217 tttttctctctctttcacttatacatttttcttaata 34332253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 176 - 234
Target Start/End: Complemental strand, 37541136 - 37541076
Alignment:
Q  176 ttgataaag-catttaaaatcatttttctctctctttcatttataca-tttttcttaataa 234  Q
    ||||||||| |||| |||| ||||||||||||||||||| ||||||| |||||||||||||    
T  37541136 ttgataaagacattcaaaaccatttttctctctctttcacttatacactttttcttaataa 37541076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 13500746 - 13500692
Alignment:
Q  181 aaagcatttaaaatcatttttctctctct--ttcatttatacatttttcttaata 233  Q
    |||||| |||||||||||| ||| |||||  ||||||||||||||||||||||||    
T  13500746 aaagcacttaaaatcatttctctttctctcattcatttatacatttttcttaata 13500692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 196 - 273
Target Start/End: Complemental strand, 36037111 - 36037032
Alignment:
Q  196 atttttctctctctttcatttataca-tttttcttaat-aatatgtatgaaatggacaaaatatttaattattatgggac 273  Q
    ||||||||| |||||||| ||||||| |||||| |||| ||||||| ||||||| ||||||| || | ||||||||||||    
T  36037111 atttttctcactctttcacttatacactttttcataattaatatgtgtgaaatgaacaaaatgttaacttattatgggac 36037032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 198 - 233
Target Start/End: Original strand, 43895954 - 43895989
Alignment:
Q  198 ttttctctctctttcatttatacatttttcttaata 233  Q
    ||||||||||||||||| ||||||||||||||||||    
T  43895954 ttttctctctctttcatctatacatttttcttaata 43895989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 183 - 233
Target Start/End: Complemental strand, 45889263 - 45889212
Alignment:
Q  183 agcatttaaaatcatttttctctctc-tttcatttatacatttttcttaata 233  Q
    |||| |||||| |||||||||||||| |||||||||||||||| ||||||||    
T  45889263 agcacttaaaaccatttttctctctcctttcatttatacatttgtcttaata 45889212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 232
Target Start/End: Complemental strand, 52382343 - 52382312
Alignment:
Q  201 tctctctctttcatttatacatttttcttaat 232  Q
    ||||||||||||||||||||||||||||||||    
T  52382343 tctctctctttcatttatacatttttcttaat 52382312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 52830422 - 52830379
Alignment:
Q  190 aaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    ||||| ||||||||||||| ||||||||||||||||| ||||||    
T  52830422 aaaattatttttctctctccttcatttatacattttttttaata 52830379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 190 - 232
Target Start/End: Complemental strand, 2219456 - 2219414
Alignment:
Q  190 aaaatcatttttctctctctttcatttatacatttttcttaat 232  Q
    ||||||||| |||||||||||||||||||||| ||| ||||||    
T  2219456 aaaatcattattctctctctttcatttatacaatttacttaat 2219414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 232
Target Start/End: Complemental strand, 21304807 - 21304773
Alignment:
Q  198 ttttctctctctttcatttatacatttttcttaat 232  Q
    |||| ||||||||||||||||||||||||||||||    
T  21304807 ttttatctctctttcatttatacatttttcttaat 21304773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 190 - 232
Target Start/End: Complemental strand, 36326213 - 36326171
Alignment:
Q  190 aaaatcatttttctctctctttcatttatacatttttcttaat 232  Q
    |||| |||| |||||||||||||||||||||| ||||||||||    
T  36326213 aaaaccattgttctctctctttcatttatacacttttcttaat 36326171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 39420686 - 39420731
Alignment:
Q  190 aaaatcatttttctctctctttcatttataca--tttttcttaata 233  Q
    ||||| ||||||||||||||||||||||||||  ||||||||||||    
T  39420686 aaaattatttttctctctctttcatttatacacttttttcttaata 39420731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 234
Target Start/End: Original strand, 26583832 - 26583873
Alignment:
Q  194 tcatttttctctctctttcatttataca-tttttcttaataa 234  Q
    |||||||||||||||||||| ||||||| |||||||||||||    
T  26583832 tcatttttctctctctttcacttatacactttttcttaataa 26583873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 234
Target Start/End: Original strand, 26760380 - 26760421
Alignment:
Q  194 tcatttttctctctctttcatttataca-tttttcttaataa 234  Q
    |||||||||||||||||||| ||||||| |||||||||||||    
T  26760380 tcatttttctctctctttcacttatacattttttcttaataa 26760421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 232
Target Start/End: Original strand, 37495911 - 37495969
Alignment:
Q  173 tacttgataaag-catttaaaatcatttttctctctctttcatttatacatttttcttaat 232  Q
    |||||||||||| |||| ||||||||||  |||||| ||||||||||||| ||||||||||    
T  37495911 tacttgataaagacattcaaaatcattt--ctctctttttcatttatacacttttcttaat 37495969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 232
Target Start/End: Original strand, 40019852 - 40019901
Alignment:
Q  183 agcatttaaaatcatttttctctctctttcatttatacatttttcttaat 232  Q
    |||| ||||||  ||||||||||||| |||| ||||||||||||||||||    
T  40019852 agcacttaaaacaatttttctctctcattcacttatacatttttcttaat 40019901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 234
Target Start/End: Complemental strand, 47479981 - 47479928
Alignment:
Q  181 aaagcatttaaaatcatttttctctctctttcatttatacatttttcttaataa 234  Q
    |||| |||||||| |||||||||||||| || ||| ||| ||||||||||||||    
T  47479981 aaagtatttaaaaccatttttctctctcgtttattgatatatttttcttaataa 47479928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 198 - 226
Target Start/End: Original strand, 2571469 - 2571497
Alignment:
Q  198 ttttctctctctttcatttatacattttt 226  Q
    |||||||||||||||||||||||||||||    
T  2571469 ttttctctctctttcatttatacattttt 2571497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 3555572 - 3555520
Alignment:
Q  181 aaagcatttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||||| |||||| |||||||| || || ||||||||||||||| ||||||||    
T  3555572 aaagcacttaaaaccatttttccctatccttcatttatacatttgtcttaata 3555520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 5040584 - 5040540
Alignment:
Q  189 taaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    ||||| |||||||||||||| ||||||||||||||| ||| ||||    
T  5040584 taaaaccatttttctctctcattcatttatacatttgtctaaata 5040540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 7787797 - 7787829
Alignment:
Q  201 tctctctctttcatttatacatttttcttaata 233  Q
    ||||||||| |||||||||||||||||||||||    
T  7787797 tctctctctctcatttatacatttttcttaata 7787829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 197 - 233
Target Start/End: Complemental strand, 10370185 - 10370149
Alignment:
Q  197 tttttctctctctttcatttatacatttttcttaata 233  Q
    |||||||||||| || |||||||||||||||||||||    
T  10370185 tttttctctctcctttatttatacatttttcttaata 10370149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 234
Target Start/End: Complemental strand, 29756145 - 29756105
Alignment:
Q  195 catttttctctctctttcatttataca-tttttcttaataa 234  Q
    ||||||||||||||||||| ||||||| |||||||||||||    
T  29756145 catttttctctctctttcacttatacactttttcttaataa 29756105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 302 - 342
Target Start/End: Original strand, 47532364 - 47532404
Alignment:
Q  302 ttaatttatatgaaattgttaaaaggatatatcatttggaa 342  Q
    |||||||||||||||| ||||||| ||||||| ||||||||    
T  47532364 ttaatttatatgaaatcgttaaaatgatatataatttggaa 47532404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 183 - 233
Target Start/End: Complemental strand, 11251141 - 11251091
Alignment:
Q  183 agcatttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||| |||||||||||||| |||||| ||||||||||||||||||||||||    
T  11251141 agcacttaaaatcatttttttctctcattcatttatacatttttcttaata 11251091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 2868672 - 2868717
Alignment:
Q  188 ttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||    
T  2868672 ttaaaaccatttttctctctccttcatttatacatttttcttaata 2868717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 173 - 232
Target Start/End: Complemental strand, 1334806 - 1334746
Alignment:
Q  173 tacttgataaag-catttaaaatcatttttctctctctttcatttatacatttttcttaat 232  Q
    |||||||||||| |||| ||||| |||||||||||||||||||||||||  ||||||||||    
T  1334806 tacttgataaaggcattcaaaattatttttctctctctttcatttatacgcttttcttaat 1334746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 9017892 - 9017944
Alignment:
Q  181 aaagcatttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||||| ||||||  ||||||||||||||||||||||||||||||| ||||||    
T  9017892 aaagcacttaaaactatttttctctctctttcatttatacattttttttaata 9017944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 53876452 - 53876400
Alignment:
Q  181 aaagcatttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||||| |||||||||||||| || ||| ||||||||||||||||||||||||    
T  53876452 aaagcacttaaaatcatttttttcactccttcatttatacatttttcttaata 53876400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 183 - 230
Target Start/End: Complemental strand, 21296517 - 21296470
Alignment:
Q  183 agcatttaaaatcatttttctctctctttcatttatacatttttctta 230  Q
    |||||||||||||||||| ||||||| ||||||||||||||| |||||    
T  21296517 agcatttaaaatcattttcctctctccttcatttatacatttgtctta 21296470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 232
Target Start/End: Complemental strand, 38600813 - 38600771
Alignment:
Q  190 aaaatcatttttctctctctttcatttatacatttttcttaat 232  Q
    |||||||||||||||||| ||||||||||||| ||||||||||    
T  38600813 aaaatcatttttctctctttttcatttatacacttttcttaat 38600771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 15280702 - 15280747
Alignment:
Q  188 ttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||||||||||||| |||||| ||||||||||||||| ||||||||    
T  15280702 ttaaaatcatttttatctctccttcatttatacatttatcttaata 15280747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 184 - 233
Target Start/End: Original strand, 17274775 - 17274824
Alignment:
Q  184 gcatttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    ||||||||||  ||||||||| ||| ||||||||||||||||||||||||    
T  17274775 gcatttaaaactatttttctccctccttcatttatacatttttcttaata 17274824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 173 - 233
Target Start/End: Original strand, 29526071 - 29526132
Alignment:
Q  173 tacttgataa-agcatttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||||||||| | ||||||||||||||||| ||||||||| ||||||| |||||| ||||||    
T  29526071 tacttgataagaacatttaaaatcatttttatctctcttttatttatatattttttttaata 29526132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 188 - 229
Target Start/End: Original strand, 33994755 - 33994796
Alignment:
Q  188 ttaaaatcatttttctctctctttcatttatacatttttctt 229  Q
    ||||||| ||||||||||||| ||||||||||||||||||||    
T  33994755 ttaaaattatttttctctctccttcatttatacatttttctt 33994796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 196 - 233
Target Start/End: Original strand, 54783069 - 54783106
Alignment:
Q  196 atttttctctctctttcatttatacatttttcttaata 233  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  54783069 atttttctctctcattcatttatacatttttcttaata 54783106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 17777002 - 17776958
Alignment:
Q  189 taaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    ||||| |||||||||||||| ||||||||||||||||| ||||||    
T  17777002 taaaaccatttttctctctcattcatttatacattttttttaata 17776958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 19078303 - 19078259
Alignment:
Q  189 taaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    ||||| |||||||||||||| ||||||||||||||||| ||||||    
T  19078303 taaaaccatttttctctctcattcatttatacattttttttaata 19078259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 48409697 - 48409729
Alignment:
Q  201 tctctctctttcatttatacatttttcttaata 233  Q
    |||||||||||||||||||||||||||||||||    
T  48409697 tctctctctttcatttatacatttttcttaata 48409729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 232
Target Start/End: Original strand, 51165034 - 51165094
Alignment:
Q  173 tacttgataaag-catttaaaatcatttttctctctctttcatttatacatttttcttaat 232  Q
    |||||||||||| || | ||||| |||||||||||||||| ||||||||| ||||||||||    
T  51165034 tacttgataaagacactcaaaattatttttctctctcttttatttatacacttttcttaat 51165094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 54122236 - 54122188
Alignment:
Q  185 catttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||||||||  ||||||||||||| ||||||||||||||| ||||||||    
T  54122236 catttaaaactatttttctctctccttcatttatacatttgtcttaata 54122188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 183 - 246
Target Start/End: Original strand, 8706239 - 8706301
Alignment:
Q  183 agcatttaaaatcatttttctctctctttcatttatacatttttcttaataatatgtatgaaat 246  Q
    |||| |||||||||||| |||||||  ||||||||||||||||| ||  |||||||||||||||    
T  8706239 agcacttaaaatcatttctctctcttcttcatttatacattttt-tttttaatatgtatgaaat 8706301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 183 - 246
Target Start/End: Original strand, 9058126 - 9058188
Alignment:
Q  183 agcatttaaaatcatttttctctctctttcatttatacatttttcttaataatatgtatgaaat 246  Q
    |||| |||||||||||| |||||||  ||||||||||||||||| ||  |||||||||||||||    
T  9058126 agcacttaaaatcatttctctctcttcttcatttatacattttt-tttttaatatgtatgaaat 9058188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 51636905 - 51636858
Alignment:
Q  188 ttaaaatcatttttctctctctttcatttatacatttttcttaataat 235  Q
    |||||| |||||||||||||| |||| ||| |||||||||||||||||    
T  51636905 ttaaaaccatttttctctctccttcacttaaacatttttcttaataat 51636858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 188 - 230
Target Start/End: Complemental strand, 1772115 - 1772073
Alignment:
Q  188 ttaaaatcatttttctctctctttcatttatacatttttctta 230  Q
    |||||| |||||||||||||| || ||||||||||||||||||    
T  1772115 ttaaaaccatttttctctctcctttatttatacatttttctta 1772073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 233
Target Start/End: Complemental strand, 14756128 - 14756078
Alignment:
Q  183 agcatttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||| ||||||| ||||||||||||| || | |||||||||||||||||||    
T  14756128 agcacttaaaattatttttctctctcctttaattatacatttttcttaata 14756078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 233
Target Start/End: Complemental strand, 26134717 - 26134667
Alignment:
Q  183 agcatttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||| ||||||  ||||||||||||| ||||||||||||||| ||||||||    
T  26134717 agcacttaaaacaatttttctctctccttcatttatacatttgtcttaata 26134667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 233
Target Start/End: Complemental strand, 43639530 - 43639480
Alignment:
Q  183 agcatttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||| |||||| |||||||||||||| |||||||||| |||| ||||||||    
T  43639530 agcacttaaaaccatttttctctctccttcatttatatatttgtcttaata 43639480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 190 - 232
Target Start/End: Complemental strand, 53754071 - 53754029
Alignment:
Q  190 aaaatcatttttctctctctttcatttatacatttttcttaat 232  Q
    |||||||||||||||||| ||||||||||||| |||| |||||    
T  53754071 aaaatcatttttctctctatttcatttatacactttttttaat 53754029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 190 - 228
Target Start/End: Complemental strand, 54021465 - 54021427
Alignment:
Q  190 aaaatcatttttctctctctttcatttatacatttttct 228  Q
    |||||||||||||||||||||| ||||||||| ||||||    
T  54021465 aaaatcatttttctctctcttttatttatacacttttct 54021427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 233
Target Start/End: Original strand, 10855100 - 10855137
Alignment:
Q  196 atttttctctctctttcatttatacatttttcttaata 233  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  10855100 atttttctctctccttcatttatacatttatcttaata 10855137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 22202376 - 22202331
Alignment:
Q  188 ttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    ||||||| |||||||||| || ||||||||||||||| ||||||||    
T  22202376 ttaaaattatttttctctttccttcatttatacatttatcttaata 22202331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 233
Target Start/End: Complemental strand, 32827305 - 32827268
Alignment:
Q  196 atttttctctctctttcatttatacatttttcttaata 233  Q
    |||||| |||||| ||||||||||||||||||||||||    
T  32827305 atttttttctctccttcatttatacatttttcttaata 32827268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 36097664 - 36097619
Alignment:
Q  188 ttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||||| |||||||||||||| ||||||||||| || |||||||||    
T  36097664 ttaaaaccatttttctctctccttcatttatacgttcttcttaata 36097619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 233
Target Start/End: Complemental strand, 39866554 - 39866517
Alignment:
Q  196 atttttctctctctttcatttatacatttttcttaata 233  Q
    |||||||||| || ||||||||||||||||||||||||    
T  39866554 atttttctctttccttcatttatacatttttcttaata 39866517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 233
Target Start/End: Complemental strand, 54845517 - 54845480
Alignment:
Q  196 atttttctctctctttcatttatacatttttcttaata 233  Q
    ||||||||||||| ||||||||||||| ||||||||||    
T  54845517 atttttctctctccttcatttatacatatttcttaata 54845480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 197 - 233
Target Start/End: Complemental strand, 11529076 - 11529040
Alignment:
Q  197 tttttctctctctttcatttatacatttttcttaata 233  Q
    ||||||||| ||||||||||||| |||||||||||||    
T  11529076 tttttctctttctttcatttatatatttttcttaata 11529040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 176 - 234
Target Start/End: Complemental strand, 24618950 - 24618890
Alignment:
Q  176 ttgataaag-catttaaaatcatttttctctctctttcatttataca-tttttcttaataa 234  Q
    ||||||||| || |||||| |||||||||||| |||||| ||||||| |||||||||||||    
T  24618950 ttgataaaggcacttaaaaccatttttctctccctttcacttatacactttttcttaataa 24618890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 197 - 233
Target Start/End: Complemental strand, 39365037 - 39365001
Alignment:
Q  197 tttttctctctctttcatttatacatttttcttaata 233  Q
    |||||||||||| || |||||||||||||||||||||    
T  39365037 tttttctctctcctttatttatacatttttcttaata 39365001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 195 - 232
Target Start/End: Original strand, 20560 - 20597
Alignment:
Q  195 catttttctctctctttcatttatacatttttcttaat 232  Q
    |||||||||||||||| |||||||||||||||||||||    
T  20560 catttttctctctcttccatttatacatttttcttaat 20597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 8964 - 9009
Alignment:
Q  188 ttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    ||||||| ||||||||||||  ||||||||||||||||||||||||    
T  8964 ttaaaattatttttctctcttcttcatttatacatttttcttaata 9009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000007; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 3604609 - 3604564
Alignment:
Q  188 ttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||||    
T  3604609 ttaaaaccatttttctctctcttttatttatacatttgtcttaata 3604564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 184 - 233
Target Start/End: Original strand, 33109467 - 33109516
Alignment:
Q  184 gcatttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    ||||||||||  ||||||||||||| ||||| ||||||||||||||||||    
T  33109467 gcatttaaaactatttttctctctcattcatctatacatttttcttaata 33109516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 15325232 - 15325292
Alignment:
Q  176 ttgataaagcatttaaaatcatttttctctctctttcatttataca-tttttcttaataat 235  Q
    ||||||| ||||| |||| || |||||||||||||||| ||||||| ||||||||||||||    
T  15325232 ttgataaggcattcaaaaccaattttctctctctttcacttatacactttttcttaataat 15325292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 233
Target Start/End: Original strand, 31265872 - 31265922
Alignment:
Q  183 agcatttaaaatcatttttctctctctttcatttatacatttttcttaata 233  Q
    |||| ||||||  ||||||||||||| ||||||||||||||| ||||||||    
T  31265872 agcacttaaaactatttttctctctccttcatttatacatttgtcttaata 31265922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 232
Target Start/End: Complemental strand, 178991 - 178949
Alignment:
Q  188 ttaaaatcatttttctctctctttcatttatacatttttcttaat 232  Q
    |||||||||||||||||||| ||  ||||||||||||||||||||    
T  178991 ttaaaatcatttttctctctttt--atttatacatttttcttaat 178949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 3874057 - 3874016
Alignment:
Q  190 aaaatcatttttctctctctttcatttatacatttttcttaa 231  Q
    |||||||||||| ||||||||||||||||||| |||| ||||    
T  3874057 aaaatcatttttttctctctttcatttatacactttttttaa 3874016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 233
Target Start/End: Original strand, 15081529 - 15081566
Alignment:
Q  196 atttttctctctctttcatttatacatttttcttaata 233  Q
    ||||||||||| | ||||||||||||||||||||||||    
T  15081529 atttttctctcaccttcatttatacatttttcttaata 15081566  T

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Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 230
Target Start/End: Complemental strand, 33017934 - 33017905
Alignment:
Q  201 tctctctctttcatttatacatttttctta 230  Q
    ||||||||||||||||||||||||||||||    
T  33017934 tctctctctttcatttatacatttttctta 33017905  T

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Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 196 - 232
Target Start/End: Complemental strand, 3166109 - 3166073
Alignment:
Q  196 atttttctctctctttcatttatacatttttcttaat 232  Q
    |||||||||||||||||||||||||| |||| |||||    
T  3166109 atttttctctctctttcatttatacactttttttaat 3166073  T

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Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 186 - 234
Target Start/End: Original strand, 7844433 - 7844481
Alignment:
Q  186 atttaaaatcatttttctctctctttcatttatacatttttcttaataa 234  Q
    |||||||| |||||||||||||| ||||  |||| ||||||||||||||    
T  7844433 atttaaaaccatttttctctctcattcacatatatatttttcttaataa 7844481  T

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Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 15351405 - 15351345
Alignment:
Q  176 ttgataaagcatttaaaatcatttttctctctctttcatttatacat-ttttcttaataat 235  Q
    ||||||| ||| | ||||||| ||||||||||| |||| |||||||| |||||||||||||    
T  15351405 ttgataaggcactaaaaatcaattttctctctcattcacttatacattttttcttaataat 15351345  T

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Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 297 - 333
Target Start/End: Complemental strand, 26567041 - 26567005
Alignment:
Q  297 atttcttaatttatatgaaattgttaaaaggatatat 333  Q
    |||| |||||||||||||||||||||||| |||||||    
T  26567041 attttttaatttatatgaaattgttaaaatgatatat 26567005  T

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Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 34915822 - 34915775
Alignment:
Q  188 ttaaaatcatt--tttctctctctttcatttatacatttttcttaata 233  Q
    |||||||||||  | |||||||||||| ||||||||||||||||||||    
T  34915822 ttaaaatcatttctctctctctctttcgtttatacatttttcttaata 34915775  T

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Target: scaffold0685 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0685
Description:

Target: scaffold0685; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 190 - 232
Target Start/End: Complemental strand, 6407 - 6365
Alignment:
Q  190 aaaatcatttttctctctctttcatttatacatttttcttaat 232  Q
    |||||||| | |||||||||||| |||||||||||||||||||    
T  6407 aaaatcatctctctctctctttcctttatacatttttcttaat 6365  T

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Target: scaffold0028 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 233
Target Start/End: Original strand, 26711 - 26749
Alignment:
Q  195 catttttctctctctttcatttatacatttttcttaata 233  Q
    |||||||||||||| ||||||||||||||| ||||||||    
T  26711 catttttctctctccttcatttatacatttgtcttaata 26749  T

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Target: scaffold0491 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 11800 - 11841
Alignment:
Q  193 atcatttttctctctctttcatttata-catttttcttaata 233  Q
    ||||||||||||||||||||| ||||| ||||||||||||||    
T  11800 atcatttttctctctctttcagttatatcatttttcttaata 11841  T

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