View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21033_low_8 (Length: 207)
Name: NF21033_low_8
Description: NF21033
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21033_low_8 |
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Alignment Details
Target: chr8 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 16651994 - 16652165
Alignment:
| Q |
17 |
aaaaagaataccacctagcagaccaaatcctactcaaaacaagtaattaacatgttcctctttcttcatgcgtctctaatcattgttctttccattatat |
116 |
Q |
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| T |
16651994 |
aaaaagaataccacctagcagaccaaatcctactcaaaacaagtaattaacatgttcctctttcttcatgcgtctctaatcattgttctttccattatat |
16652093 |
T |
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| Q |
117 |
ctacaagttaataacaaagattgt----gtgtctaccaggttaaagcctaggataaaggattgagcagagaa |
184 |
Q |
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|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16652094 |
ctacaagttaataacaaagattgtgtacgtgtctaccaggttaaagcctaggataaaggattgagcagagaa |
16652165 |
T |
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