View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21034_low_6 (Length: 329)
Name: NF21034_low_6
Description: NF21034
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21034_low_6 |
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Alignment Details
Target: chr4 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 52 - 317
Target Start/End: Original strand, 53839044 - 53839304
Alignment:
| Q |
52 |
ataccttgcacaactcagatgcttttacaatgtgcgatacaaatacaatttgctaagaaaattagggattgacaattttgacattattttcacgatatca |
151 |
Q |
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| T |
53839044 |
ataccttgcactactcagaagcttttacaatgtgcgatacaaatacaatttgctaagaaaattagggattgacaattttgacattattttcacgatatca |
53839143 |
T |
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| Q |
152 |
ataaccacctatacatctagtatggacaatttgagtccgttcaacattatcaaaacaattttcttaaggcatgtgggaattacacacactttaaacatga |
251 |
Q |
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| T |
53839144 |
ataaccacctatacat-----atggacaatttgagtccgttcaacattatcaaaacaattttcttaaggcatgtgggaattacacacactttaaacatga |
53839238 |
T |
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| Q |
252 |
gtgtggatattgaagttgtatttgagtcctgttgataaagtttctgaaatatgcaaccaatatatt |
317 |
Q |
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| T |
53839239 |
gtgtggatattgaagttgtatttgagtcatgttgttaaagtttctgaaatatgcaacctatatatt |
53839304 |
T |
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