View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21036_high_16 (Length: 412)
Name: NF21036_high_16
Description: NF21036
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21036_high_16 |
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Alignment Details
Target: chr7 (Bit Score: 388; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 388; E-Value: 0
Query Start/End: Original strand, 1 - 400
Target Start/End: Original strand, 40387079 - 40387478
Alignment:
| Q |
1 |
caccaccatacatatcctaatatccttcgacacgcattcgtttggacacgaaacagcatatcccacggggcttatagccctacgattcaacaaagctgat |
100 |
Q |
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| T |
40387079 |
caccaccatacatatcctaatatccttcaacacgcattcgtttggacacgaaacagcatatcccacggggcttatagccctacgattcaacaaagctgat |
40387178 |
T |
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| Q |
101 |
acgtggcttgcccttattggatgagaaaattttctgattgtttccctcgaataatttaagataacttacagattaggtgtgggtgttagatctaatgtag |
200 |
Q |
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| T |
40387179 |
acgtggcttgcccttattggatgagaaaattttctgattgtttccctcgaataatttaagataacttatagattaggtgtgggtgttagatctaatgtag |
40387278 |
T |
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| Q |
201 |
agtgggagcgctgtatctaccatctacttaagtagaatttggaacataaaagataatgaaaacagtttctttcatttttaaattttagtttgcttagtca |
300 |
Q |
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| T |
40387279 |
agtgggagcgctgtatctaccatctacttaagtagaatttggaacataaaagataatgaaaacagtttctttcatttttaaattttagtttgcttagtca |
40387378 |
T |
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| Q |
301 |
acattttgtttgggagcaatattaaatatggcttggccaaaccaaaaagcaaaccttttaaacagcattatatattagctattttaatttttgggagtat |
400 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40387379 |
acattttgtttgggagtaatattaaatatggcttggccaaaccaaaaagcaaaccttttaaacagcattatatattagctattttaatttttgggagtat |
40387478 |
T |
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