View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21036_low_25 (Length: 359)
Name: NF21036_low_25
Description: NF21036
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21036_low_25 |
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Alignment Details
Target: chr7 (Bit Score: 286; Significance: 1e-160; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 62 - 351
Target Start/End: Original strand, 40386817 - 40387106
Alignment:
| Q |
62 |
aaaagcgtggagtgatcgaagtcttaagtctaaaccaaaaagttaaatgagaagattcaatcctaagcacatatgagtagaaaaattacaaaccatttac |
161 |
Q |
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| T |
40386817 |
aaaagcgtggagtgatcgaagtcttaagtctaaaccaaaaagttaaatgagaagattcaatcctaagcacatatgagtagaaaaattacaaaccatttac |
40386916 |
T |
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| Q |
162 |
atatgtatatttttaaaagctcgttcggtacgttagttagagcaaattgtagtctcatagtgaaatgctgaaacatatataattcaataatggatattta |
261 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40386917 |
atatgtatatttttaaaagctcgttcggtacgttagttagagcaaattgtagtctcatagtgaaatgctgaaacatatataattcaataatggatattta |
40387016 |
T |
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| Q |
262 |
ggtgcagtcaattgcataaattagtttactattactccattcgttgcataataaaatgtggtcaccaccatacatatcctaatattcttc |
351 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
40387017 |
ggtgcagtcaattgcataaattagtttactattactccattcgttgcataataaaatgtggtcaccaccatacatatcctaatatccttc |
40387106 |
T |
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