View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21039_high_1 (Length: 425)
Name: NF21039_high_1
Description: NF21039
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21039_high_1 |
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Alignment Details
Target: chr7 (Bit Score: 352; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 352; E-Value: 0
Query Start/End: Original strand, 1 - 384
Target Start/End: Complemental strand, 7325187 - 7324804
Alignment:
| Q |
1 |
aatatccagacttcaacaggaagtcatccagagtcaagaaatgatccttgatagatgagaaaagaaagtgggaactctagctatcaagtaaatgagttat |
100 |
Q |
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| T |
7325187 |
aatatccagacttcaacaggaagtcatccagagtcaagaaatgatccttgatagaagagaaaagaaagtgggaactctagctatcaagtaaatgagttat |
7325088 |
T |
|
| Q |
101 |
gtcgtatgactgtaatcaagaatgacaagaatgagttgatcccaacatgtaaagtaataggatggaggatgtgcataaccaaaggtaaaactttgcaata |
200 |
Q |
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| T |
7325087 |
gtcgtatgactgtaatcaagaatgacaagaatgagttgatcccaacatgtaaagtaataggatggaggatgtgcataaccaaaggtaaaactttgcaata |
7324988 |
T |
|
| Q |
201 |
aggaagaccactttccattaccattcatggataagatgcttaagagactagccaaaaagggcttagatggatatatacccaggatagaatcaaatcgccg |
300 |
Q |
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| T |
7324987 |
aggaagaccactttccattaccattcatggataagatgctgaagagactagccaaaaagggcttagatggatatatactcaggatagaatcaaatcgtca |
7324888 |
T |
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| Q |
301 |
ttgatctagtagatcaagaaaagacaacttttacagacccttttgaagtgttcgcatatcgaaggatgtctttcgggttatgca |
384 |
Q |
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|||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
7324887 |
ttgatctagttgatcaagaaaagacaacttttacaaacccttttgaagtgttcgcatatcgaaggatgtcattcgggttatgca |
7324804 |
T |
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