View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2103_low_4 (Length: 439)

Name: NF2103_low_4
Description: NF2103
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2103_low_4
NF2103_low_4
[»] scaffold0009 (2 HSPs)
scaffold0009 (186-318)||(49505-49637)
scaffold0009 (192-316)||(49505-49629)
[»] chr1 (67 HSPs)
chr1 (181-317)||(39401965-39402101)
chr1 (186-316)||(14984837-14984967)
chr1 (186-321)||(11795933-11796068)
chr1 (186-317)||(31842794-31842925)
chr1 (186-316)||(27159358-27159488)
chr1 (186-316)||(44668093-44668223)
chr1 (186-313)||(9981647-9981774)
chr1 (186-317)||(26471064-26471195)
chr1 (181-316)||(47216699-47216834)
chr1 (186-316)||(12483628-12483758)
chr1 (194-317)||(47777480-47777603)
chr1 (186-316)||(1050888-1051018)
chr1 (186-316)||(34042696-34042826)
chr1 (186-310)||(44955212-44955336)
chr1 (198-316)||(25694331-25694449)
chr1 (186-296)||(23278021-23278131)
chr1 (186-316)||(47588337-47588467)
chr1 (186-316)||(47969694-47969825)
chr1 (196-316)||(17556762-17556883)
chr1 (192-316)||(11897060-11897184)
chr1 (201-317)||(11989796-11989912)
chr1 (192-316)||(16448108-16448232)
chr1 (192-316)||(37552147-37552271)
chr1 (192-306)||(12213484-12213598)
chr1 (192-316)||(12483634-12483758)
chr1 (262-316)||(16448184-16448238)
chr1 (192-316)||(11897054-11897178)
chr1 (194-316)||(37552141-37552263)
chr1 (192-317)||(44955212-44955337)
chr1 (192-316)||(9981647-9981771)
chr1 (192-316)||(27159364-27159488)
chr1 (192-316)||(31842801-31842925)
chr1 (192-316)||(39401972-39402096)
chr1 (192-316)||(44668099-44668223)
chr1 (198-309)||(12043616-12043726)
chr1 (235-309)||(1598389-1598461)
chr1 (192-310)||(14984843-14984961)
chr1 (260-317)||(47216773-47216830)
chr1 (192-316)||(11795933-11796057)
chr1 (260-316)||(26471139-26471195)
chr1 (192-308)||(47777487-47777603)
chr1 (270-317)||(1050887-1050934)
chr1 (197-302)||(12047117-12047223)
chr1 (258-316)||(12213546-12213604)
chr1 (220-301)||(571542-571622)
chr1 (251-316)||(5392211-5392276)
chr1 (192-316)||(17556752-17556877)
chr1 (196-308)||(12062568-12062679)
chr1 (194-306)||(12062568-12062679)
chr1 (272-316)||(23278087-23278131)
chr1 (192-232)||(25694403-25694443)
chr1 (192-316)||(34042696-34042820)
chr1 (258-316)||(47969694-47969753)
chr1 (220-282)||(3739838-3739900)
chr1 (186-244)||(5392218-5392276)
chr1 (222-316)||(19391910-19392004)
chr1 (186-316)||(21537869-21537999)
chr1 (262-316)||(21537945-21537999)
chr1 (222-280)||(29855084-29855142)
chr1 (209-278)||(11774536-11774605)
chr1 (192-240)||(1050964-1051012)
chr1 (199-307)||(12069499-12069607)
chr1 (192-232)||(26471071-26471111)
chr1 (205-281)||(33668748-33668824)
chr1 (192-232)||(47216705-47216745)
chr1 (260-316)||(47588411-47588467)
chr1 (221-317)||(48050938-48051034)
[»] chr6 (51 HSPs)
chr6 (183-316)||(6330112-6330245)
chr6 (186-316)||(2830335-2830465)
chr6 (186-316)||(8382969-8383099)
chr6 (186-316)||(11572145-11572275)
chr6 (186-316)||(26602323-26602453)
chr6 (186-316)||(8099530-8099660)
chr6 (186-316)||(13853593-13853723)
chr6 (186-316)||(9644696-9644826)
chr6 (186-316)||(9650713-9650843)
chr6 (186-316)||(33052794-33052924)
chr6 (186-316)||(35031001-35031131)
chr6 (181-316)||(6068561-6068696)
chr6 (196-317)||(8417792-8417913)
chr6 (186-316)||(6143554-6143684)
chr6 (202-316)||(28747134-28747248)
chr6 (216-318)||(17992018-17992120)
chr6 (192-316)||(22896477-22896592)
chr6 (186-278)||(13043758-13043850)
chr6 (198-316)||(3788048-3788167)
chr6 (201-316)||(7596977-7597092)
chr6 (194-282)||(6068974-6069062)
chr6 (196-316)||(14936457-14936577)
chr6 (192-316)||(8099530-8099654)
chr6 (181-316)||(8382964-8383099)
chr6 (183-316)||(2830335-2830468)
chr6 (192-317)||(26602322-26602447)
chr6 (192-316)||(6330115-6330239)
chr6 (205-301)||(6549902-6549997)
chr6 (192-316)||(11572151-11572275)
chr6 (262-316)||(8186443-8186497)
chr6 (195-316)||(8417802-8417923)
chr6 (260-313)||(14936531-14936584)
chr6 (192-316)||(13853599-13853723)
chr6 (260-316)||(33052868-33052924)
chr6 (192-242)||(3788111-3788161)
chr6 (260-310)||(31849586-31849636)
chr6 (192-317)||(9644695-9644820)
chr6 (192-317)||(9650712-9650837)
chr6 (275-316)||(22896471-22896512)
chr6 (192-316)||(6068566-6068690)
chr6 (260-316)||(6143554-6143610)
chr6 (260-316)||(35031075-35031131)
chr6 (194-316)||(8186369-8186489)
chr6 (186-300)||(4251309-4251423)
chr6 (192-230)||(35031007-35031045)
chr6 (196-301)||(3421588-3421693)
chr6 (215-316)||(5685368-5685469)
chr6 (197-230)||(12473651-12473684)
chr6 (272-317)||(13043757-13043802)
chr6 (260-308)||(6069014-6069062)
chr6 (249-297)||(33393165-33393213)
[»] chr8 (66 HSPs)
chr8 (181-316)||(6552650-6552785)
chr8 (186-316)||(54612-54742)
chr8 (186-316)||(2890162-2890292)
chr8 (186-316)||(7785778-7785908)
chr8 (186-316)||(3304278-3304408)
chr8 (186-316)||(7805699-7805829)
chr8 (186-316)||(39571203-39571333)
chr8 (186-316)||(43199354-43199484)
chr8 (186-316)||(44498187-44498317)
chr8 (186-316)||(12763654-12763784)
chr8 (186-316)||(25601000-25601130)
chr8 (186-316)||(32114475-32114605)
chr8 (186-316)||(32211363-32211493)
chr8 (186-316)||(33289261-33289391)
chr8 (192-317)||(31654619-31654744)
chr8 (186-310)||(12343146-12343270)
chr8 (186-316)||(15888352-15888482)
chr8 (186-316)||(7012171-7012301)
chr8 (186-316)||(13578857-13578987)
chr8 (192-316)||(8587176-8587300)
chr8 (192-316)||(28463617-28463741)
chr8 (186-248)||(4245649-4245711)
chr8 (192-316)||(27422199-27422320)
chr8 (198-309)||(24691986-24692096)
chr8 (192-301)||(17006917-17007026)
chr8 (192-301)||(17570221-17570330)
chr8 (260-316)||(8587170-8587226)
chr8 (192-316)||(33057600-33057724)
chr8 (260-311)||(28463616-28463667)
chr8 (192-317)||(6552654-6552779)
chr8 (192-317)||(12343146-12343271)
chr8 (192-316)||(54618-54742)
chr8 (192-316)||(2890168-2890292)
chr8 (192-316)||(7785784-7785908)
chr8 (221-309)||(13246801-13246889)
chr8 (192-316)||(25601006-25601130)
chr8 (192-316)||(31654613-31654737)
chr8 (192-316)||(43199360-43199484)
chr8 (181-316)||(3304273-3304408)
chr8 (195-240)||(27422266-27422311)
chr8 (192-317)||(39571209-39571334)
chr8 (260-316)||(4245655-4245711)
chr8 (260-316)||(7805773-7805829)
chr8 (260-316)||(15888426-15888482)
chr8 (265-313)||(17006914-17006962)
chr8 (265-313)||(17570285-17570333)
chr8 (263-315)||(30171483-30171535)
chr8 (260-316)||(32114549-32114605)
chr8 (260-316)||(44498261-44498317)
chr8 (193-243)||(13246801-13246851)
chr8 (262-308)||(15688038-15688084)
chr8 (198-300)||(24202989-24203091)
chr8 (260-316)||(12763728-12763784)
chr8 (201-281)||(28999083-28999163)
chr8 (272-316)||(32211449-32211493)
chr8 (192-316)||(33289267-33289391)
chr8 (249-300)||(35564706-35564757)
chr8 (270-316)||(7012171-7012217)
chr8 (262-316)||(24692054-24692108)
chr8 (192-230)||(32211369-32211407)
chr8 (262-316)||(33057594-33057648)
chr8 (192-232)||(7012255-7012295)
chr8 (192-232)||(7805705-7805745)
chr8 (192-232)||(12763660-12763700)
chr8 (179-211)||(36366148-36366180)
chr8 (192-232)||(44498193-44498233)
[»] chr7 (54 HSPs)
chr7 (181-316)||(7240744-7240879)
chr7 (186-317)||(46840860-46840991)
chr7 (186-316)||(1738447-1738577)
chr7 (184-317)||(23314138-23314271)
chr7 (186-325)||(94309-94448)
chr7 (181-316)||(9268751-9268886)
chr7 (181-316)||(31319399-31319534)
chr7 (186-324)||(1565721-1565859)
chr7 (186-316)||(7482225-7482355)
chr7 (186-316)||(38063913-38064043)
chr7 (192-316)||(22285705-22285829)
chr7 (186-316)||(36583395-36583525)
chr7 (192-323)||(36016189-36016320)
chr7 (181-316)||(38441455-38441590)
chr7 (186-316)||(28536751-28536881)
chr7 (313-424)||(46063119-46063230)
chr7 (186-316)||(4790248-4790378)
chr7 (202-310)||(33418392-33418500)
chr7 (186-309)||(40840126-40840249)
chr7 (196-317)||(9575419-9575540)
chr7 (183-309)||(7269412-7269538)
chr7 (198-316)||(7661088-7661206)
chr7 (192-316)||(1738453-1738577)
chr7 (192-316)||(7240749-7240873)
chr7 (192-316)||(22285699-22285823)
chr7 (260-316)||(36016270-36016326)
chr7 (192-316)||(46840860-46840984)
chr7 (192-310)||(94324-94442)
chr7 (183-317)||(31319396-31319530)
chr7 (192-316)||(7482225-7482349)
chr7 (260-316)||(1565803-1565859)
chr7 (196-316)||(7661076-7661196)
chr7 (192-316)||(9268756-9268880)
chr7 (260-316)||(23314213-23314269)
chr7 (260-316)||(28536825-28536881)
chr7 (192-316)||(36583395-36583519)
chr7 (260-316)||(38063987-38064043)
chr7 (262-316)||(7269481-7269535)
chr7 (258-316)||(9575409-9575467)
chr7 (192-316)||(38441460-38441584)
chr7 (262-315)||(46877666-46877719)
chr7 (192-316)||(4790248-4790372)
chr7 (192-232)||(23314145-23314185)
chr7 (260-316)||(24710743-24710799)
chr7 (269-309)||(29993251-29993291)
chr7 (192-232)||(33418460-33418500)
chr7 (193-232)||(40840126-40840165)
chr7 (193-240)||(46877666-46877713)
chr7 (265-319)||(28411051-28411105)
chr7 (266-318)||(27809226-27809276)
chr7 (288-316)||(5347722-5347750)
chr7 (196-232)||(36016206-36016242)
chr7 (189-301)||(36033241-36033353)
chr7 (196-232)||(38063923-38063959)
[»] chr2 (69 HSPs)
chr2 (186-317)||(15896842-15896973)
chr2 (186-316)||(3055558-3055688)
chr2 (186-316)||(13197710-13197840)
chr2 (186-316)||(37990013-37990143)
chr2 (186-316)||(41478639-41478769)
chr2 (186-316)||(44398686-44398816)
chr2 (186-316)||(9047755-9047885)
chr2 (186-316)||(16243783-16243913)
chr2 (186-316)||(44397547-44397677)
chr2 (192-320)||(15372232-15372360)
chr2 (185-316)||(37666610-37666741)
chr2 (186-316)||(6648519-6648649)
chr2 (186-316)||(16044317-16044447)
chr2 (186-316)||(38917522-38917652)
chr2 (186-317)||(12337936-12338067)
chr2 (186-316)||(13344484-13344614)
chr2 (197-316)||(41492896-41493015)
chr2 (192-316)||(30099182-30099306)
chr2 (186-297)||(4683951-4684062)
chr2 (192-301)||(12170414-12170523)
chr2 (214-313)||(44804581-44804680)
chr2 (205-313)||(16734802-16734910)
chr2 (197-316)||(13724102-13724221)
chr2 (186-307)||(31150653-31150769)
chr2 (217-276)||(41453090-41453149)
chr2 (182-316)||(13197706-13197840)
chr2 (192-316)||(3055558-3055682)
chr2 (192-316)||(15372226-15372350)
chr2 (192-316)||(15896842-15896966)
chr2 (192-316)||(37990019-37990143)
chr2 (192-316)||(41478645-41478769)
chr2 (192-316)||(44398686-44398810)
chr2 (197-316)||(23227272-23227391)
chr2 (191-281)||(36688887-36688977)
chr2 (194-316)||(44397547-44397669)
chr2 (260-317)||(16044391-16044448)
chr2 (192-305)||(41492902-41493015)
chr2 (260-316)||(4684006-4684062)
chr2 (192-316)||(13724108-13724232)
chr2 (260-316)||(37666684-37666740)
chr2 (195-315)||(45294333-45294452)
chr2 (186-305)||(15271054-15271173)
chr2 (260-319)||(31150650-31150709)
chr2 (196-306)||(23986788-23986898)
chr2 (192-317)||(6648525-6648650)
chr2 (193-310)||(16243790-16243907)
chr2 (260-305)||(23227346-23227391)
chr2 (192-285)||(30852648-30852741)
chr2 (201-257)||(4553069-4553125)
chr2 (192-232)||(9047761-9047801)
chr2 (192-232)||(12337943-12337983)
chr2 (192-316)||(38917528-38917652)
chr2 (260-319)||(12170473-12170532)
chr2 (291-322)||(30761502-30761533)
chr2 (200-302)||(36089457-36089559)
chr2 (191-316)||(20900669-20900793)
chr2 (272-316)||(13344484-13344528)
chr2 (192-232)||(13344568-13344608)
chr2 (288-316)||(13775832-13775860)
chr2 (192-232)||(16044323-16044363)
chr2 (262-302)||(20900678-20900718)
chr2 (192-232)||(30099188-30099228)
chr2 (288-316)||(30852719-30852747)
chr2 (262-306)||(36688892-36688936)
chr2 (192-232)||(37666616-37666656)
chr2 (260-316)||(39724284-39724340)
chr2 (260-316)||(40714016-40714072)
chr2 (288-316)||(42263469-42263497)
chr2 (192-232)||(44804584-44804624)
[»] chr5 (61 HSPs)
chr5 (186-316)||(9395350-9395480)
chr5 (186-317)||(37148954-37149085)
chr5 (186-320)||(23359942-23360076)
chr5 (186-316)||(36563538-36563668)
chr5 (186-316)||(41989407-41989537)
chr5 (192-316)||(13103030-13103154)
chr5 (186-316)||(11795168-11795298)
chr5 (192-316)||(13033057-13033181)
chr5 (186-316)||(17025624-17025754)
chr5 (186-317)||(20848074-20848204)
chr5 (186-316)||(37641953-37642084)
chr5 (192-316)||(26350350-26350474)
chr5 (186-317)||(582989-583119)
chr5 (195-318)||(4443969-4444092)
chr5 (210-316)||(21575970-21576076)
chr5 (207-316)||(6126845-6126954)
chr5 (192-257)||(38361750-38361815)
chr5 (200-310)||(3549553-3549663)
chr5 (210-302)||(2366352-2366444)
chr5 (193-274)||(13539909-13539986)
chr5 (195-312)||(966157-966274)
chr5 (192-317)||(9395349-9395474)
chr5 (192-299)||(2629561-2629668)
chr5 (183-230)||(11574166-11574213)
chr5 (192-303)||(39290781-39290891)
chr5 (186-316)||(23359942-23360072)
chr5 (235-316)||(35904448-35904527)
chr5 (201-308)||(36595782-36595886)
chr5 (249-313)||(9006885-9006949)
chr5 (260-316)||(13033051-13033107)
chr5 (192-316)||(13103024-13103148)
chr5 (192-316)||(17025624-17025748)
chr5 (260-316)||(26350424-26350480)
chr5 (192-316)||(36563544-36563668)
chr5 (260-316)||(37149029-37149085)
chr5 (201-300)||(40138806-40138906)
chr5 (192-316)||(41989413-41989537)
chr5 (192-319)||(11795165-11795292)
chr5 (258-316)||(4443960-4444018)
chr5 (201-302)||(18167334-18167435)
chr5 (221-282)||(39030587-39030648)
chr5 (260-317)||(39290774-39290830)
chr5 (260-316)||(582989-583045)
chr5 (192-240)||(966224-966272)
chr5 (192-232)||(6126908-6126948)
chr5 (260-316)||(20848074-20848130)
chr5 (184-275)||(27080981-27081072)
chr5 (286-317)||(38361712-38361743)
chr5 (191-241)||(3549552-3549602)
chr5 (259-309)||(27081013-27081063)
chr5 (267-316)||(11574161-11574210)
chr5 (272-309)||(13539949-13539986)
chr5 (200-244)||(2366352-2366396)
chr5 (192-240)||(4444036-4444084)
chr5 (291-319)||(11931965-11931993)
chr5 (192-240)||(13033127-13033175)
chr5 (192-232)||(21576030-21576070)
chr5 (194-230)||(36595782-36595818)
chr5 (192-232)||(37148961-37149001)
chr5 (272-316)||(37641953-37641997)
chr5 (192-232)||(37642038-37642078)
[»] chr4 (80 HSPs)
chr4 (186-316)||(47833611-47833741)
chr4 (186-317)||(20538685-20538816)
chr4 (181-316)||(48336258-48336393)
chr4 (186-316)||(3372121-3372251)
chr4 (186-316)||(3904683-3904813)
chr4 (186-316)||(6121893-6122023)
chr4 (186-316)||(53337370-53337500)
chr4 (180-316)||(46797719-46797855)
chr4 (186-317)||(42797732-42797863)
chr4 (186-316)||(3992976-3993106)
chr4 (186-316)||(24704370-24704500)
chr4 (186-316)||(52756675-52756805)
chr4 (192-320)||(43900555-43900683)
chr4 (181-317)||(51894581-51894717)
chr4 (181-316)||(5986871-5987006)
chr4 (186-316)||(47838617-47838747)
chr4 (195-316)||(33621805-33621926)
chr4 (186-316)||(7579310-7579440)
chr4 (195-316)||(41469766-41469887)
chr4 (198-316)||(3422073-3422190)
chr4 (192-315)||(40913190-40913313)
chr4 (186-297)||(33551201-33551312)
chr4 (198-316)||(41615676-41615794)
chr4 (20-120)||(34537157-34537258)
chr4 (186-297)||(26231577-26231688)
chr4 (197-317)||(29845656-29845770)
chr4 (196-285)||(25855093-25855182)
chr4 (192-316)||(17344219-17344343)
chr4 (201-303)||(50430431-50430533)
chr4 (192-316)||(4780302-4780425)
chr4 (260-316)||(17236862-17236918)
chr4 (186-264)||(17236839-17236918)
chr4 (182-240)||(4780371-4780429)
chr4 (192-317)||(24704369-24704494)
chr4 (192-316)||(42797732-42797856)
chr4 (192-316)||(43900549-43900673)
chr4 (192-316)||(47833611-47833735)
chr4 (183-297)||(41594651-41594765)
chr4 (201-307)||(43095230-43095336)
chr4 (192-314)||(44900086-44900208)
chr4 (245-311)||(45478151-45478217)
chr4 (192-318)||(53337368-53337494)
chr4 (183-316)||(3372121-3372254)
chr4 (192-317)||(6121899-6122024)
chr4 (183-316)||(7579310-7579443)
chr4 (201-282)||(31013036-31013117)
chr4 (192-316)||(3904689-3904813)
chr4 (192-316)||(3992976-3993100)
chr4 (186-242)||(5986950-5987006)
chr4 (260-316)||(20538760-20538816)
chr4 (260-316)||(33551201-33551257)
chr4 (260-316)||(40913263-40913319)
chr4 (235-307)||(45725905-45725977)
chr4 (192-316)||(47838623-47838747)
chr4 (192-316)||(48336263-48336387)
chr4 (192-316)||(51894588-51894712)
chr4 (200-286)||(9876653-9876739)
chr4 (262-316)||(1716301-1716355)
chr4 (266-316)||(44900080-44900130)
chr4 (192-304)||(1716307-1716417)
chr4 (271-316)||(26231577-26231622)
chr4 (192-232)||(3422144-3422184)
chr4 (260-316)||(25855083-25855139)
chr4 (192-232)||(40913195-40913235)
chr4 (192-232)||(41469772-41469812)
chr4 (260-316)||(46797725-46797781)
chr4 (192-232)||(46797809-46797849)
chr4 (197-276)||(6924724-6924802)
chr4 (193-304)||(41615683-41615794)
chr4 (192-230)||(20538692-20538730)
chr4 (262-316)||(41594654-41594708)
chr4 (260-310)||(52756681-52756731)
chr4 (260-301)||(50430492-50430533)
chr4 (249-301)||(6422530-6422582)
chr4 (181-301)||(23226018-23226138)
chr4 (200-240)||(32822285-32822325)
chr4 (192-232)||(33621880-33621920)
chr4 (262-318)||(38160370-38160426)
chr4 (186-230)||(38160372-38160416)
chr4 (260-316)||(41469840-41469896)
[»] chr3 (73 HSPs)
chr3 (186-316)||(2787832-2787962)
chr3 (186-316)||(10297979-10298109)
chr3 (186-316)||(19557052-19557182)
chr3 (186-316)||(49823381-49823511)
chr3 (181-317)||(48340392-48340528)
chr3 (181-316)||(22721926-22722061)
chr3 (186-316)||(34080030-34080160)
chr3 (186-316)||(40690996-40691126)
chr3 (192-316)||(17653718-17653842)
chr3 (192-316)||(37508927-37509051)
chr3 (186-316)||(4238594-4238724)
chr3 (186-316)||(8437425-8437555)
chr3 (186-316)||(8817386-8817516)
chr3 (186-316)||(21295326-21295456)
chr3 (186-316)||(38964392-38964522)
chr3 (186-316)||(44785396-44785526)
chr3 (186-316)||(51406673-51406803)
chr3 (192-316)||(46208036-46208160)
chr3 (186-313)||(9111497-9111624)
chr3 (186-313)||(42507358-42507485)
chr3 (186-316)||(42170346-42170476)
chr3 (192-317)||(6013335-6013460)
chr3 (192-316)||(36095680-36095804)
chr3 (195-316)||(35513482-35513603)
chr3 (193-304)||(33942944-33943055)
chr3 (192-320)||(9213522-9213650)
chr3 (194-317)||(5323214-5323338)
chr3 (195-317)||(34988084-34988206)
chr3 (186-316)||(17653712-17653842)
chr3 (186-316)||(37508921-37509051)
chr3 (192-316)||(46208030-46208154)
chr3 (186-316)||(4238594-4238724)
chr3 (262-316)||(9027142-9027196)
chr3 (183-316)||(19557049-19557182)
chr3 (192-316)||(21295332-21295456)
chr3 (183-316)||(34080027-34080160)
chr3 (198-271)||(43323072-43323145)
chr3 (192-316)||(9213516-9213640)
chr3 (192-316)||(10297979-10298103)
chr3 (200-316)||(26019480-26019595)
chr3 (192-316)||(49823387-49823511)
chr3 (262-317)||(2131748-2131803)
chr3 (193-316)||(22721931-22722054)
chr3 (186-241)||(33128206-33128261)
chr3 (203-269)||(8951943-8952009)
chr3 (201-286)||(29285790-29285873)
chr3 (193-282)||(8092595-8092684)
chr3 (220-317)||(30443762-30443859)
chr3 (260-317)||(35513472-35513529)
chr3 (260-316)||(36095754-36095810)
chr3 (192-316)||(38964392-38964516)
chr3 (196-316)||(42170356-42170476)
chr3 (192-316)||(42507361-42507485)
chr3 (260-316)||(44785470-44785526)
chr3 (192-316)||(48340397-48340521)
chr3 (193-316)||(8817393-8817516)
chr3 (201-316)||(33128206-33128319)
chr3 (260-310)||(2787906-2787956)
chr3 (266-316)||(34988075-34988125)
chr3 (192-310)||(40691002-40691120)
chr3 (192-313)||(6013342-6013463)
chr3 (192-316)||(9111500-9111624)
chr3 (192-316)||(8437425-8437549)
chr3 (260-304)||(43323072-43323116)
chr3 (192-316)||(51406673-51406797)
chr3 (196-239)||(26001141-26001184)
chr3 (257-316)||(45652069-45652128)
chr3 (192-286)||(2131702-2131796)
chr3 (192-232)||(2787838-2787878)
chr3 (192-232)||(9027148-9027188)
chr3 (260-316)||(33943006-33943062)
chr3 (192-232)||(44785402-44785442)
chr3 (269-317)||(47188956-47189004)
[»] scaffold0204 (2 HSPs)
scaffold0204 (181-316)||(23780-23915)
scaffold0204 (192-316)||(23785-23909)
[»] scaffold0482 (2 HSPs)
scaffold0482 (186-316)||(12860-12990)
scaffold0482 (192-316)||(12860-12984)
[»] scaffold0464 (3 HSPs)
scaffold0464 (184-316)||(6131-6263)
scaffold0464 (270-316)||(6215-6261)
scaffold0464 (192-232)||(6137-6177)
[»] scaffold1707 (2 HSPs)
scaffold1707 (193-304)||(1342-1453)
scaffold1707 (260-309)||(1342-1391)
[»] scaffold0011 (3 HSPs)
scaffold0011 (192-316)||(231303-231427)
scaffold0011 (262-316)||(231379-231433)
scaffold0011 (192-232)||(231309-231349)
[»] scaffold0415 (1 HSPs)
scaffold0415 (197-317)||(13730-13845)
[»] scaffold0650 (2 HSPs)
scaffold0650 (192-300)||(1-108)
scaffold0650 (260-316)||(59-114)
[»] scaffold0171 (2 HSPs)
scaffold0171 (192-282)||(12387-12477)
scaffold0171 (268-313)||(12435-12480)
[»] scaffold0003 (1 HSPs)
scaffold0003 (215-311)||(312747-312843)
[»] scaffold0007 (1 HSPs)
scaffold0007 (288-316)||(77344-77372)
[»] scaffold0002 (1 HSPs)
scaffold0002 (288-316)||(492304-492332)


Alignment Details
Target: scaffold0009 (Bit Score: 129; Significance: 1e-66; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 186 - 318
Target Start/End: Original strand, 49505 - 49637
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49505 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 49604  T
Q  286 aattctcttataaataggaccggagggagtaaa 318  Q
    |||||||||||||||||||||||||||||||||    
T  49605 aattctcttataaataggaccggagggagtaaa 49637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 192 - 316
Target Start/End: Complemental strand, 49629 - 49505
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||||| |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  49629 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 49530  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||||||||||||| ||||    
T  49529 cttataaataggaccggaggtagta 49505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 129; Significance: 1e-66; HSPs: 67)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 181 - 317
Target Start/End: Complemental strand, 39402101 - 39401965
Alignment:
Q  181 tatactactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttga 280  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  39402101 tatactactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttga 39402002  T
Q  281 cccaaaattctcttataaataggaccggagggagtaa 317  Q
    |||||||||||||||||||||||||||||||||||||    
T  39402001 cccaaaattctcttataaataggaccggagggagtaa 39401965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 186 - 316
Target Start/End: Original strand, 14984837 - 14984967
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  14984837 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 14984936  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||||    
T  14984937 aattctcttataaataggaccggagggagta 14984967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 186 - 321
Target Start/End: Original strand, 11795933 - 11796068
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  11795933 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgcatttggactgaatttttaactagatacatcaacttttgttgacccaa 11796032  T
Q  286 aattctcttataaataggaccggagggagtaaaatc 321  Q
    ||||||||||||||||||||||||||||||||||||    
T  11796033 aattctcttataaataggaccggagggagtaaaatc 11796068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 186 - 317
Target Start/End: Complemental strand, 31842925 - 31842794
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  31842925 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 31842826  T
Q  286 aattctcttataaataggaccggagggagtaa 317  Q
    ||||||||||||||||||||||||||||||||    
T  31842825 aattctcttataaataggaccggagggagtaa 31842794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 186 - 316
Target Start/End: Complemental strand, 27159488 - 27159358
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  27159488 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 27159389  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||||    
T  27159388 aattctcttataaataggaccggagggagta 27159358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 186 - 316
Target Start/End: Complemental strand, 44668223 - 44668093
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  44668223 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 44668124  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||||    
T  44668123 aattctcttataaataggaccggagggagta 44668093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 186 - 313
Target Start/End: Original strand, 9981647 - 9981774
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9981647 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 9981746  T
Q  286 aattctcttataaataggaccggaggga 313  Q
    ||||||||||||||||||||||||||||    
T  9981747 aattctcttataaataggaccggaggga 9981774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 186 - 317
Target Start/End: Complemental strand, 26471195 - 26471064
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  26471195 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgatccaa 26471096  T
Q  286 aattctcttataaataggaccggagggagtaa 317  Q
    ||||||||||||||||||||||||||||||||    
T  26471095 aattctcttataaataggaccggagggagtaa 26471064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 181 - 316
Target Start/End: Complemental strand, 47216834 - 47216699
Alignment:
Q  181 tatactactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttga 280  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  47216834 tatattactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttga 47216735  T
Q  281 cccaaaattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||| |||||||||||||    
T  47216734 cccaaaattctcttataaatagtaccggagggagta 47216699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 186 - 316
Target Start/End: Complemental strand, 12483758 - 12483628
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  12483758 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttagactgaattttgaactaaatacatcaacttttgttgacccaa 12483659  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||||    
T  12483658 aattctcttataaataggaccggagggagta 12483628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 194 - 317
Target Start/End: Complemental strand, 47777603 - 47777480
Alignment:
Q  194 ccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctct 293  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  47777603 ccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaattttgaactagatacatcaacttttgttgacccaaaattctct 47777504  T
Q  294 tataaataggaccggagggagtaa 317  Q
    ||||||||||||||||||||||||    
T  47777503 tataaataggaccggagggagtaa 47777480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 186 - 316
Target Start/End: Original strand, 1050888 - 1051018
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||    
T  1050888 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgcatttggactgaatttttaactagatacatcaactttagttgacccaa 1050987  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||||    
T  1050988 aattctcttataaataggaccggagggagta 1051018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 186 - 316
Target Start/End: Original strand, 34042696 - 34042826
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  34042696 tactacctccggtcctatttataagagaaatttaggtcaacaaaaatgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 34042795  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    ||||||||||||||||| |||||||||||||    
T  34042796 aattctcttataaatagaaccggagggagta 34042826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 186 - 310
Target Start/End: Complemental strand, 44955336 - 44955212
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  44955336 tactacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacctaa 44955237  T
Q  286 aattctcttataaataggaccggag 310  Q
    |||||||||||||||||||||||||    
T  44955236 aattctcttataaataggaccggag 44955212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 198 - 316
Target Start/End: Original strand, 25694331 - 25694449
Alignment:
Q  198 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttata 297  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  25694331 tcctatttataagagaaatttagatcaataaaagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgacccaaaattctcttata 25694430  T
Q  298 aataggaccggagggagta 316  Q
    |||||||||||||||||||    
T  25694431 aataggaccggagggagta 25694449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 186 - 296
Target Start/End: Complemental strand, 23278131 - 23278021
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  23278131 tactacctccggtcctatttataagagaaatttaggtcaacaaaaatgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 23278032  T
Q  286 aattctcttat 296  Q
    |||||||||||    
T  23278031 aattctcttat 23278021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 186 - 316
Target Start/End: Complemental strand, 47588467 - 47588337
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  47588467 tactacctctggtcttatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaattagatacatcaacttttgttgacccaa 47588368  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    ||||||||||||||||  |||| ||||||||    
T  47588367 aattctcttataaataaaaccgaagggagta 47588337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 186 - 316
Target Start/End: Original strand, 47969694 - 47969825
Alignment:
Q  186 tactatctccggtcctatttataa-gagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgaccca 284  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||| |||    
T  47969694 tactctctccggtcctatttataaagagaaatttaggtcaacaaaagtaaatgtatttagactgaatttttaactagatacatcaacttttgttgatcca 47969793  T
Q  285 aaattctcttataaataggaccggagggagta 316  Q
    ||||| | ||||||||||||||||||||||||    
T  47969794 aaattattttataaataggaccggagggagta 47969825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 196 - 316
Target Start/End: Original strand, 17556762 - 17556883
Alignment:
Q  196 ggtcctatttataagagaaatttaggtcaacaaaagtgaa-tgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctt 294  Q
    |||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||    
T  17556762 ggtcctatttataagagaaagttaggtcaacaaaagttaaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaagtttctctt 17556861  T
Q  295 ataaataggaccggagggagta 316  Q
    ||||||||||||||||||||||    
T  17556862 ataaataggaccggagggagta 17556883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 192 - 316
Target Start/End: Original strand, 11897060 - 11897184
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    |||||||||||||||||||||||| ||||||||||||||||  |||||| || ||||||||||||||   ||||||||||||||||||||||||| ||||    
T  11897060 ctccggtcctatttataagagaaagttaggtcaacaaaagttgatgtatctgaactgaatttttaaccggatacatcaacttttgttgacccaaatttct 11897159  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||    
T  11897160 cttataaataggaccggagggagta 11897184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 201 - 317
Target Start/End: Original strand, 11989796 - 11989912
Alignment:
Q  201 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaat 300  Q
    ||||||||||||||| || |||||||||||   ||| ||||||||||||||||||||| ||||||||||| |||| ||||| |||| |||| ||||||||    
T  11989796 tatttataagagaaagttgggtcaacaaaaactaatatatttggactgaatttttaaccaaatacatcaatttttattgactcaaatttcttttataaat 11989895  T
Q  301 aggaccggagggagtaa 317  Q
    |||||||||||||||||    
T  11989896 aggaccggagggagtaa 11989912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 192 - 316
Target Start/End: Complemental strand, 16448232 - 16448108
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    |||||||||||||||||||||||| || |||||||||||||  |||||| ||||||||||||| ||| | |||||| ||||||||||||||||| ||||     
T  16448232 ctccggtcctatttataagagaaagttgggtcaacaaaagttgatgtatctggactgaattttgaaccagatacataaacttttgttgacccaatattcc 16448133  T
Q  292 cttataaataggaccggagggagta 316  Q
    | |||||||| |||||||| |||||    
T  16448132 cctataaataagaccggagtgagta 16448108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 192 - 316
Target Start/End: Original strand, 37552147 - 37552271
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    |||||||||||||||||||| ||| ||  |||||||| |||  |||||| ||||||||||||||||| | ||||||  | ||||||||||||||| ||||    
T  37552147 ctccggtcctatttataagataaagttgagtcaacaacagttcatgtatctggactgaatttttaaccagatacattcatttttgttgacccaaatttct 37552246  T
Q  292 cttataaataggaccggagggagta 316  Q
    ||||||||||||||||| |||||||    
T  37552247 cttataaataggaccggggggagta 37552271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 192 - 306
Target Start/End: Complemental strand, 12213598 - 12213484
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    |||| ||| ||||||||||||||  |||||||||||||| | ||||||||| || |||||||||||||||||| ||||| ||||||||||||||  ||||    
T  12213598 ctccagtcttatttataagagaatgttaggtcaacaaaaattaatgtatttagattgaatttttaactaaataaatcaatttttgttgacccaagtttct 12213499  T
Q  292 cttataaataggacc 306  Q
    || ||||||||||||    
T  12213498 ctaataaataggacc 12213484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 192 - 316
Target Start/End: Original strand, 12483634 - 12483758
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||||| |    || ||    ||||||||||  ||||||||||||| ||| ||||    
T  12483634 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatttagttcaaaattcagtctaaatacattcacttttgttgacctaaatttct 12483733  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||||||||||||| ||||    
T  12483734 cttataaataggaccggaggtagta 12483758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 262 - 316
Target Start/End: Original strand, 16448184 - 16448238
Alignment:
Q  262 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  16448184 atacatcaacttttgttgacccaactttctcttataaataggaccggagggagta 16448238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 192 - 316
Target Start/End: Complemental strand, 11897178 - 11897054
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaa-atacatcaacttttgttgacccaaaattc 290  Q
    ||||||||||||||||||||||||||| |||||||||||||  ||||||  ||  | ||  || |  | | ||||||||||||||||||||| ||  |||    
T  11897178 ctccggtcctatttataagagaaatttgggtcaacaaaagttgatgtatccggt-taaaaattcagttcagatacatcaacttttgttgacctaactttc 11897080  T
Q  291 tcttataaataggaccggagggagta 316  Q
    ||||||||||||||||||||||||||    
T  11897079 tcttataaataggaccggagggagta 11897054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 194 - 316
Target Start/End: Complemental strand, 37552263 - 37552141
Alignment:
Q  194 ccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctct 293  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||| |||    || ||    | | |||||| |||| |||||||| |||  || |||    
T  37552263 ccggtcctatttataagagaaatttgggtcaacaaaaatgaatgtatctggttaaaaattcagtccagatacatgaactgttgttgactcaactttatct 37552164  T
Q  294 tataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||    
T  37552163 tataaataggaccggagggagta 37552141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 192 - 317
Target Start/End: Original strand, 44955212 - 44955337
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| |||||||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| || |    
T  44955212 ctccggtcctatttataagagaattttaggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaattttt 44955311  T
Q  292 cttataaataggaccggagggagtaa 317  Q
    |||||||||||||||||||| |||||    
T  44955312 cttataaataggaccggaggtagtaa 44955337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 192 - 316
Target Start/End: Complemental strand, 9981771 - 9981647
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  9981771 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 9981672  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||||||||||||| ||||    
T  9981671 cttataaataggaccggaggtagta 9981647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 192 - 316
Target Start/End: Original strand, 27159364 - 27159488
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  27159364 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 27159463  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||||||||||||| ||||    
T  27159464 cttataaataggaccggaggtagta 27159488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 192 - 316
Target Start/End: Original strand, 31842801 - 31842925
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  31842801 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 31842900  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||||||||||||| ||||    
T  31842901 cttataaataggaccggaggtagta 31842925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 192 - 316
Target Start/End: Original strand, 39401972 - 39402096
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  39401972 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 39402071  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||||||||||||| ||||    
T  39402072 cttataaataggaccggaggtagta 39402096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 192 - 316
Target Start/End: Original strand, 44668099 - 44668223
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  44668099 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 44668198  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||||||||||||| ||||    
T  44668199 cttataaataggaccggaggtagta 44668223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 198 - 309
Target Start/End: Original strand, 12043616 - 12043726
Alignment:
Q  198 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttata 297  Q
    |||||||||||| ||| ||||| ||||||||||||  |||||||| || | |||||||||| | |||||| || |||||||||   ||| || |||||||    
T  12043616 tcctatttataaaagatatttaagtcaacaaaagttgatgtattt-gattcaatttttaacaagatacattaatttttgttgatttaaatttttcttata 12043714  T
Q  298 aataggaccgga 309  Q
    ||||||||||||    
T  12043715 aataggaccgga 12043726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 235 - 309
Target Start/End: Complemental strand, 1598461 - 1598389
Alignment:
Q  235 atgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccgga 309  Q
    |||||||||||||||||||||||| | ||||||||| ||||||||| ||| | ||||||||||||||||| ||||    
T  1598461 atgtatttggactgaatttttaac-atatacatcaatttttgttga-ccatatttctcttataaataggatcgga 1598389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 192 - 310
Target Start/End: Complemental strand, 14984961 - 14984843
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  14984961 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 14984862  T
Q  292 cttataaataggaccggag 310  Q
    |||||||||||||||||||    
T  14984861 cttataaataggaccggag 14984843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 260 - 317
Target Start/End: Original strand, 47216773 - 47216830
Alignment:
Q  260 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtaa 317  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  47216773 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtaa 47216830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 316
Target Start/End: Complemental strand, 11796057 - 11795933
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | |||| |||  ||||||||||||| ||| ||||    
T  11796057 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatgcattcacttttgttgacctaaatttct 11795958  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||||||||||||| ||||    
T  11795957 cttataaataggaccggaggtagta 11795933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 316
Target Start/End: Original strand, 26471139 - 26471195
Alignment:
Q  260 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  26471139 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 26471195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 308
Target Start/End: Original strand, 47777487 - 47777603
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  47777487 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttcaaaattcagtccaaatacattcacttttgttgacctaaatttct 47777586  T
Q  292 cttataaataggaccgg 308  Q
    |||||||||||||||||    
T  47777587 cttataaataggaccgg 47777603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 1050934 - 1050887
Alignment:
Q  270 acttttgttgacccaaaattctcttataaataggaccggagggagtaa 317  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  1050934 acttttgttgacctaaatttctcttataaataggaccggaggtagtaa 1050887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 197 - 302
Target Start/End: Original strand, 12047117 - 12047223
Alignment:
Q  197 gtcctatttataagagaaatttaggtcaacaaaa-gtgaatgtatttggactgaattttt-aactaaatacatcaacttttgttgacccaaaattctctt 294  Q
    ||||||||||||||||||| ||  || ||||||| |||| ||||||| |||||||||||| ||||  |||||||||  ||| |||| ||||| |||||||    
T  12047117 gtcctatttataagagaaagttgagttaacaaaaagtga-tgtatttagactgaattttttaactggatacatcaatctttattgatccaaatttctctt 12047215  T
Q  295 ataaatag 302  Q
    ||||||||    
T  12047216 ataaatag 12047223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 316
Target Start/End: Original strand, 12213546 - 12213604
Alignment:
Q  258 ctaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    |||||||||| || ||||||||||| || ||||||||||||||| ||| ||||||||||    
T  12213546 ctaaatacattaatttttgttgacctaacattctcttataaataagactggagggagta 12213604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 301
Target Start/End: Original strand, 571542 - 571622
Alignment:
Q  220 ggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaata 301  Q
    ||||||||||||| | ||||||| ||||||||||| |||||  ||||| |||||||||||| | || |||||| ||||||||    
T  571542 ggtcaacaaaagtta-tgtatttagactgaattttgaactaggtacattaacttttgttgatcaaatattctcctataaata 571622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 251 - 316
Target Start/End: Original strand, 5392211 - 5392276
Alignment:
Q  251 tttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    |||||||| |||||||||||||||| |||||| ||| |||||||||| || |||||| || |||||    
T  5392211 tttttaaccaaatacatcaacttttattgacctaaatttctcttatatattggaccgaagagagta 5392276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 192 - 316
Target Start/End: Complemental strand, 17556877 - 17556752
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca-tcaacttttgttgacccaaaattc 290  Q
    |||||||||||||||||||||||| || |||||||||||||  |||||| | |    || ||    | ||||||| | |||||||||||||| ||  |||    
T  17556877 ctccggtcctatttataagagaaacttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacatttaacttttgttgacctaactttc 17556778  T
Q  291 tcttataaataggaccggagggagta 316  Q
    |||||||||||||||| |||||||||    
T  17556777 tcttataaataggaccagagggagta 17556752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 308
Target Start/End: Complemental strand, 12062679 - 12062568
Alignment:
Q  196 ggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctta 295  Q
    ||||||||||||||||||||||||  ||||||||| | ||||||| | || | ||  || ||  | ||||||||||||||||||| | |||  ||| |||    
T  12062679 ggtcctatttataagagaaatttaaatcaacaaaaattaatgtatct-gattaaaaattgaatcagatacatcaacttttgttgatcaaaatatctttta 12062581  T
Q  296 taaataggaccgg 308  Q
    |||||||||||||    
T  12062580 taaataggaccgg 12062568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 306
Target Start/End: Original strand, 12062568 - 12062679
Alignment:
Q  194 ccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctct 293  Q
    |||||||||||||||| ||| |||| | |||||||||||  |||||| | || | |||||||||  | |||||| || |||||||||   ||| ||||||    
T  12062568 ccggtcctatttataaaagatattttgatcaacaaaagttgatgtatct-gattcaatttttaatcagatacattaatttttgttgatttaaatttctct 12062666  T
Q  294 tataaataggacc 306  Q
    |||||||||||||    
T  12062667 tataaataggacc 12062679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 316
Target Start/End: Original strand, 23278087 - 23278131
Alignment:
Q  272 ttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  23278087 ttttgttgacctaaatttctcttataaataggaccggaggtagta 23278131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 232
Target Start/End: Complemental strand, 25694443 - 25694403
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagt 232  Q
    ||||||||||||||||||||||| ||| |||||||||||||    
T  25694443 ctccggtcctatttataagagaattttgggtcaacaaaagt 25694403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 316
Target Start/End: Complemental strand, 34042820 - 34042696
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||| ||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  | ||||||||||| ||| ||||    
T  34042820 ctccggttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttct 34042721  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||||||||||||| ||||    
T  34042720 cttataaataggaccggaggtagta 34042696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 316
Target Start/End: Complemental strand, 47969753 - 47969694
Alignment:
Q  258 ctaaatacatcaacttttgttgacccaaaattctc-ttataaataggaccggagggagta 316  Q
    ||||||||||  ||||||||||||| ||| ||||| |||||||||||||||||| |||||    
T  47969753 ctaaatacatttacttttgttgacctaaatttctctttataaataggaccggagagagta 47969694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 282
Target Start/End: Original strand, 3739838 - 3739900
Alignment:
Q  220 ggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacc 282  Q
    ||||||| ||||| |||||||||||    |||||||||| |||||||| ||||||||||||||    
T  3739838 ggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacc 3739900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 244
Target Start/End: Complemental strand, 5392276 - 5392218
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttgg 244  Q
    |||| ||| |||||| || ||||||||||||||||||||| ||||||  ||||||||||    
T  5392276 tactctcttcggtccaatatataagagaaatttaggtcaataaaagttgatgtatttgg 5392218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 222 - 316
Target Start/End: Original strand, 19391910 - 19392004
Alignment:
Q  222 tcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    ||||||||||| ||| ||||| |||  ||||||| |  |||||||| |||||||||| || |||  |||||||||| ||||||| ||||| ||||    
T  19391910 tcaacaaaagttaatatatttcgaccaaatttttgagaaaatacattaacttttgttcactcaactttctcttatatataggactggaggtagta 19392004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 316
Target Start/End: Complemental strand, 21537999 - 21537869
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    |||| |||||| || ||||||||||||||| ||  ||||||||||||  |||||| || ||| || ||| ||  | ||||||||||||| |||||| |||    
T  21537999 tactctctccgatcttatttataagagaaaattgagtcaacaaaagttgatgtatctgaactaaaatttgaatcagatacatcaactttcgttgactcaa 21537900  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
       |||||| ||||||| | |||| ||||||    
T  21537899 ctctctcttgtaaatagaaacggaaggagta 21537869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 262 - 316
Target Start/End: Original strand, 21537945 - 21537999
Alignment:
Q  262 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||| |||  |||||||||||||| || ||||| |||||    
T  21537945 atacatcaacttttgttgactcaattttctcttataaataagatcggagagagta 21537999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 222 - 280
Target Start/End: Complemental strand, 29855142 - 29855084
Alignment:
Q  222 tcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttga 280  Q
    ||||||||||| ||||||||| |    |||||||||| |||||||||||||||||||||    
T  29855142 tcaacaaaagttaatgtatttcgtacaaatttttaaccaaatacatcaacttttgttga 29855084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 278
Target Start/End: Original strand, 11774536 - 11774605
Alignment:
Q  209 agagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgtt 278  Q
    ||||||| |||||||||||||| |  ||||| ||  |||||||||| ||||| |||| ||||||||||||    
T  11774536 agagaaagttaggtcaacaaaaattgatgtaattaaactgaattttgaactagatacgtcaacttttgtt 11774605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 192 - 240
Target Start/End: Complemental strand, 1051012 - 1050964
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtat 240  Q
    ||||||||||||||||||||||| ||| ||||||| |||||  ||||||    
T  1051012 ctccggtcctatttataagagaattttgggtcaactaaagttgatgtat 1050964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 199 - 307
Target Start/End: Original strand, 12069499 - 12069607
Alignment:
Q  199 cctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataa 298  Q
    ||||||||| ||||||| ||  || ||||||| |  |||||||| |||||||||||||||   ||| |||||||||| |  || |||  |||||||||||    
T  12069499 cctatttatgagagaaagttgagttaacaaaaatttatgtatttagactgaatttttaacctgataaatcaacttttatcaactcaattttctcttataa 12069598  T
Q  299 ataggaccg 307  Q
    ||| |||||    
T  12069599 ataagaccg 12069607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 192 - 232
Target Start/End: Original strand, 26471071 - 26471111
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagt 232  Q
    ||||||||||||||||||||||| ||| | |||||||||||    
T  26471071 ctccggtcctatttataagagaattttggatcaacaaaagt 26471111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 281
Target Start/End: Original strand, 33668748 - 33668824
Alignment:
Q  205 tataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgac 281  Q
    ||||||||||| || || |||||||| | ||||||| | ||||||||||||||| |||| ||| |  ||||||||||    
T  33668748 tataagagaaaattgggacaacaaaactcaatgtatctagactgaatttttaaccaaatgcattactttttgttgac 33668824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 192 - 232
Target Start/End: Original strand, 47216705 - 47216745
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagt 232  Q
    ||||||| ||||||||||||||| ||| |||||||||||||    
T  47216705 ctccggtactatttataagagaattttgggtcaacaaaagt 47216745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 260 - 316
Target Start/End: Original strand, 47588411 - 47588467
Alignment:
Q  260 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    ||||||||  ||||||||||||| ||| |||||||||||||| |||| |||| ||||    
T  47588411 aaatacattcacttttgttgacctaaatttctcttataaataagaccagaggtagta 47588467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 317
Target Start/End: Original strand, 48050938 - 48051034
Alignment:
Q  221 gtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtaa 317  Q
    |||||||||||| ||||||||||| |   ||| | ||| ||||||||||||||| ||||||| |    ||||||||||| ||||||  |||||||||    
T  48050938 gtcaacaaaagtaaatgtatttggtccacattatgaaccaaatacatcaactttagttgaccaatttgtctcttataaaaaggaccatagggagtaa 48051034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 126; Significance: 8e-65; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 183 - 316
Target Start/End: Original strand, 6330112 - 6330245
Alignment:
Q  183 tactactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacc 282  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  6330112 tactactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacc 6330211  T
Q  283 caaaattctcttataaataggaccggagggagta 316  Q
    ||||||||||||||||||||||||||||||||||    
T  6330212 caaaattctcttataaataggaccggagggagta 6330245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 186 - 316
Target Start/End: Original strand, 2830335 - 2830465
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2830335 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 2830434  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||||    
T  2830435 aattctcttataaataggaccggagggagta 2830465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 186 - 316
Target Start/End: Complemental strand, 8383099 - 8382969
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  8383099 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 8383000  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||||    
T  8382999 aattctcttataaataggaccggagggagta 8382969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 186 - 316
Target Start/End: Complemental strand, 11572275 - 11572145
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  11572275 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 11572176  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||||    
T  11572175 aattctcttataaataggaccggagggagta 11572145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 186 - 316
Target Start/End: Original strand, 26602323 - 26602453
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  26602323 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 26602422  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||||    
T  26602423 aattctcttataaataggaccggagggagta 26602453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 186 - 316
Target Start/End: Original strand, 8099530 - 8099660
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  8099530 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgacccaa 8099629  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||||    
T  8099630 aattctcttataaataggaccggagggagta 8099660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 186 - 316
Target Start/End: Complemental strand, 13853723 - 13853593
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13853723 tactaccttcggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 13853624  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||||    
T  13853623 aattctcttataaataggaccggagggagta 13853593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 186 - 316
Target Start/End: Original strand, 9644696 - 9644826
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9644696 tactacctccggtcctatttataagagaaatttaggtcaacataaatgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 9644795  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||||    
T  9644796 aattctcttataaataggaccggagggagta 9644826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 186 - 316
Target Start/End: Original strand, 9650713 - 9650843
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9650713 tactacctccggtcctatttataagagaaatttaggtcaacataaatgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 9650812  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||||    
T  9650813 aattctcttataaataggaccggagggagta 9650843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 186 - 316
Target Start/End: Complemental strand, 33052924 - 33052794
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  33052924 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttattgacccaa 33052825  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||| ||||||    
T  33052824 aattctcttataaataggaccggatggagta 33052794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 186 - 316
Target Start/End: Complemental strand, 35031131 - 35031001
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  35031131 tactacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaatttttgttgacccaa 35031032  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||| ||||    
T  35031031 aattctcttataaataggaccggaggaagta 35031001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 181 - 316
Target Start/End: Original strand, 6068561 - 6068696
Alignment:
Q  181 tatactactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttga 280  Q
    |||| ||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  6068561 tataatactacctccggtcctatttataagaaaaatttaggtcaataaaagtgaatgtatttggattgaatttttaactagatacatcaacttttgttga 6068660  T
Q  281 cccaaaattctcttataaataggaccggagggagta 316  Q
    | ||||||||||||||||||||||||||||||||||    
T  6068661 ctcaaaattctcttataaataggaccggagggagta 6068696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 196 - 317
Target Start/End: Complemental strand, 8417913 - 8417792
Alignment:
Q  196 ggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctta 295  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  8417913 ggtcttatttataagagaaatttaggtcaacaaaagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgacccaaaattctctta 8417814  T
Q  296 taaataggaccggagggagtaa 317  Q
    |||||||||||| |||||||||    
T  8417813 taaataggaccgaagggagtaa 8417792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 186 - 316
Target Start/End: Original strand, 6143554 - 6143684
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||    
T  6143554 tactacctccgatcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgtcccaa 6143653  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    ||||||||||||||||| |||||| ||||||    
T  6143654 aattctcttataaatagaaccggaaggagta 6143684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 202 - 316
Target Start/End: Complemental strand, 28747248 - 28747134
Alignment:
Q  202 atttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaata 301  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  28747248 atttataagagaaatttagatcaacaaaagtgaatgtatttggactgaatttttaattagatacatcaacttttgttgacccaaaattctcttataaata 28747149  T
Q  302 ggaccggagggagta 316  Q
    |||| | ||||||||    
T  28747148 ggactgaagggagta 28747134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 216 - 318
Target Start/End: Original strand, 17992018 - 17992120
Alignment:
Q  216 tttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagt 315  Q
    |||||||||| ||||||||||||||||||| |||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||| |||||||    
T  17992018 tttaggtcaataaaagtgaatgtatttggattgaatttttaactagatacatcgatttttgttgacccaaaattctcttataaataggaccgaagggagt 17992117  T
Q  316 aaa 318  Q
    |||    
T  17992118 aaa 17992120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 192 - 316
Target Start/End: Original strand, 22896477 - 22896592
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||||||||||||         |||||||||||||||||||||||| ||||||||||||||||||||  ||||||||    
T  22896477 ctccggtcctatttataagagaagtttaggtcaaca---------gtatttggactgaatttttaactagatacatcaacttttgttgacaaaaaattct 22896567  T
Q  292 cttataaataggaccggagggagta 316  Q
    ||||||||||||||||| |||||||    
T  22896568 cttataaataggaccggcgggagta 22896592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 186 - 278
Target Start/End: Original strand, 13043758 - 13043850
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgtt 278  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||| |||||||||||||||||    
T  13043758 tactacctccggttctatttataagagaaatttaggtcaacaaaaatgaatgtatttgaattgaatttttaactagatacatcaacttttgtt 13043850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 198 - 316
Target Start/End: Original strand, 3788048 - 3788167
Alignment:
Q  198 tcctatttataagagaaatttaggtcaa-caaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttat 296  Q
    |||||||||||||||||| || |||||| ||||| |   || || ||||||||||| ||||||||||||||||||||||||||||| ||| || ||||||    
T  3788048 tcctatttataagagaaagttgggtcaatcaaaatttgttggatgtggactgaattgttaactaaatacatcaacttttgttgacctaaatttatcttat 3788147  T
Q  297 aaataggaccggagggagta 316  Q
    ||||| ||||||||||||||    
T  3788148 aaataagaccggagggagta 3788167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 201 - 316
Target Start/End: Complemental strand, 7597092 - 7596977
Alignment:
Q  201 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaat 300  Q
    ||||||||||||||| ||  || |||||||||  ||||||  | ||||||||||||||||||||||||||||||| ||||| |||| ||||| |||||||    
T  7597092 tatttataagagaaagttgtgttaacaaaagttgatgtatccgaactgaatttttaactaaatacatcaacttttattgactcaaatttctcctataaat 7596993  T
Q  301 aggaccggagggagta 316  Q
    ||||  ||||||||||    
T  7596992 aggattggagggagta 7596977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 194 - 282
Target Start/End: Complemental strand, 6069062 - 6068974
Alignment:
Q  194 ccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacc 282  Q
    |||||||||||||||| ||| |||||||||||||||||| ||||||||||| || |||||||||||  |||| ||| ||||||||||||    
T  6069062 ccggtcctatttataaaagatatttaggtcaacaaaagttaatgtatttggtctaaatttttaactcgatacttcatcttttgttgacc 6068974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 196 - 316
Target Start/End: Complemental strand, 14936577 - 14936457
Alignment:
Q  196 ggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctta 295  Q
    |||||||||||||||||| |||| ||||||||| |||  |||||||||||   |||| ||||||| |||||||| |||||||||||| |||  | ||||     
T  14936577 ggtcctatttataagagatatttgggtcaacaatagttgatgtatttggaacaaattcttaactagatacatcaccttttgttgacctaaatgtttcttc 14936478  T
Q  296 taaataggaccggagggagta 316  Q
    || |||||||| |||||||||    
T  14936477 tatataggaccagagggagta 14936457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 192 - 316
Target Start/End: Complemental strand, 8099654 - 8099530
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||  | | ||||||||  ||||||||||||| ||| ||||    
T  8099654 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttct 8099555  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||||||||||||| ||||    
T  8099554 cttataaataggaccggaggtagta 8099530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 181 - 316
Target Start/End: Original strand, 8382964 - 8383099
Alignment:
Q  181 tatactactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttga 280  Q
    |||||||||  ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  |||||||||||    
T  8382964 tatactactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttga 8383063  T
Q  281 cccaaaattctcttataaataggaccggagggagta 316  Q
    || ||| |||||||||||||||||||||||| ||||    
T  8383064 cctaaatttctcttataaataggaccggaggtagta 8383099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 183 - 316
Target Start/End: Complemental strand, 2830468 - 2830335
Alignment:
Q  183 tactactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacc 282  Q
    |||||||  ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  |||||||||||||    
T  2830468 tactactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacc 2830369  T
Q  283 caaaattctcttataaataggaccggagggagta 316  Q
     ||| |||||||||||||||||||||||| ||||    
T  2830368 taaatttctcttataaataggaccggaggtagta 2830335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 192 - 317
Target Start/End: Complemental strand, 26602447 - 26602322
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  26602447 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 26602348  T
Q  292 cttataaataggaccggagggagtaa 317  Q
    |||||||||||||||||||| |||||    
T  26602347 cttataaataggaccggaggtagtaa 26602322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 192 - 316
Target Start/End: Complemental strand, 6330239 - 6330115
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  6330239 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 6330140  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||||||||||||| ||||    
T  6330139 cttataaataggaccggaggtagta 6330115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 205 - 301
Target Start/End: Original strand, 6549902 - 6549997
Alignment:
Q  205 tataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaata 301  Q
    |||||||||||||||||||||||||||| ||||||||| ||   || |||  |||| ||||||||||||||||| ||| |||  |||||||||||||    
T  6549902 tataagagaaatttaggtcaacaaaagttaatgtattt-gatgaaaatttggactagatacatcaacttttgttaaccaaaatatctcttataaata 6549997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 192 - 316
Target Start/End: Original strand, 11572151 - 11572275
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  11572151 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 11572250  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||||||||||||| ||||    
T  11572251 cttataaataggaccggaggtagta 11572275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 262 - 316
Target Start/End: Original strand, 8186443 - 8186497
Alignment:
Q  262 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    ||||||||||||||||||| ||||| |||| |||||||||||||||| |||||||    
T  8186443 atacatcaacttttgttgatccaaatttcttttataaataggaccggggggagta 8186497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 195 - 316
Target Start/End: Original strand, 8417802 - 8417923
Alignment:
Q  195 cggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctt 294  Q
    |||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||  | | ||||||||  ||||||||||||| ||| |||||||    
T  8417802 cggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctctt 8417901  T
Q  295 ataaataggaccggagggagta 316  Q
    ||||||| |||| |||||||||    
T  8417902 ataaataagaccagagggagta 8417923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 260 - 313
Target Start/End: Original strand, 14936531 - 14936584
Alignment:
Q  260 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 313  Q
    ||||||||||||| |||||||||||||  |||||||||||||||||| ||||||    
T  14936531 aaatacatcaactattgttgacccaaatatctcttataaataggaccagaggga 14936584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 316
Target Start/End: Original strand, 13853599 - 13853723
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  13853599 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 13853698  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||||||||| ||| ||||    
T  13853699 cttataaataggaccgaaggtagta 13853723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 316
Target Start/End: Original strand, 33052868 - 33052924
Alignment:
Q  260 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  33052868 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 33052924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 242
Target Start/End: Complemental strand, 3788161 - 3788111
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtattt 242  Q
    |||||||| ||||||||||| ||||||||||||||||||||  ||||||||    
T  3788161 ctccggtcttatttataagataaatttaggtcaacaaaagttgatgtattt 3788111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 31849636 - 31849586
Alignment:
Q  260 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggag 310  Q
    ||||||||||||||||||||||||| |  ||||||||||||| ||||||||    
T  31849636 aaatacatcaacttttgttgacccatatgtctcttataaatatgaccggag 31849586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 192 - 317
Target Start/End: Complemental strand, 9644820 - 9644695
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  | || |||||||| ||| ||||    
T  9644820 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttct 9644721  T
Q  292 cttataaataggaccggagggagtaa 317  Q
    |||||||||||||||||||| |||||    
T  9644720 cttataaataggaccggaggtagtaa 9644695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 192 - 317
Target Start/End: Complemental strand, 9650837 - 9650712
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  | || |||||||| ||| ||||    
T  9650837 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttct 9650738  T
Q  292 cttataaataggaccggagggagtaa 317  Q
    |||||||||||||||||||| |||||    
T  9650737 cttataaataggaccggaggtagtaa 9650712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 22896512 - 22896471
Alignment:
Q  275 tgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    |||||||| ||| |||||||||||||||||||||||||||||    
T  22896512 tgttgacctaaacttctcttataaataggaccggagggagta 22896471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 316
Target Start/End: Complemental strand, 6068690 - 6068566
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| |||  ||||||||||||  |||||| | |    || ||  | | ||||||||  |||||| |||||| ||| || |    
T  6068690 ctccggtcctatttataagagaattttgagtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttattgacctaaattttt 6068591  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||||||||||||| ||||    
T  6068590 cttataaataggaccggaggtagta 6068566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 316
Target Start/End: Complemental strand, 6143610 - 6143554
Alignment:
Q  260 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    ||||||||  ||||||||||||| ||| ||||||||||||||||| |||||| ||||    
T  6143610 aaatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagta 6143554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 316
Target Start/End: Original strand, 35031075 - 35031131
Alignment:
Q  260 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    ||||||||  ||||||||||||| ||| || ||||||||||||||||||||| ||||    
T  35031075 aaatacattcacttttgttgacctaaatttttcttataaataggaccggaggtagta 35031131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 316
Target Start/End: Complemental strand, 8186489 - 8186369
Alignment:
Q  194 ccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctct 293  Q
    |||||||||||||||| |||||||| | |||||||||||  |||||| ||  |  ||||   ||  |||||||||||||||| ||||||||||  |||||    
T  8186489 ccggtcctatttataaaagaaatttggatcaacaaaagttgatgtatctgatccaaattg--aatcaaatacatcaacttttattgacccaaatgtctct 8186392  T
Q  294 tataaataggaccggagggagta 316  Q
    | || |||||| |||||| ||||    
T  8186391 tgtatataggagcggaggaagta 8186369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 300
Target Start/End: Original strand, 4251309 - 4251423
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    |||||||| || ||||||||| |||||||||||  |||||||||||| || ||| |||  |  |||| ||||||| ||||||||  |||| |||||| ||    
T  4251309 tactatcttcgatcctatttacaagagaaatttgagtcaacaaaagttaacgtacttgatccaaattcttaactagatacatcacattttattgacctaa 4251408  T
Q  286 aattctcttataaat 300  Q
    |  | ||||||||||    
T  4251409 atgtttcttataaat 4251423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 192 - 230
Target Start/End: Original strand, 35031007 - 35031045
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaa 230  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  35031007 ctccggtcctatttataagagaattttgggtcaacaaaa 35031045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 301
Target Start/End: Complemental strand, 3421693 - 3421588
Alignment:
Q  196 ggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctta 295  Q
    ||||||| ||||||| |||| ||  ||||||||||||  || ||| | || ||| |||||||  | ||| |||||||||||||||| |||| || |||||    
T  3421693 ggtcctacttataagtgaaagttgagtcaacaaaagttgatatatctagattgattttttaataagatatatcaacttttgttgactcaaatttttctta 3421594  T
Q  296 taaata 301  Q
    ||||||    
T  3421593 taaata 3421588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 316
Target Start/End: Original strand, 5685368 - 5685469
Alignment:
Q  215 atttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 314  Q
    |||| |||||||||||||  ||||||||||||  |||| ||||| |  |||||||  ||||| |||||||||  | ||||||||||| |||| || ||||    
T  5685368 atttgggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggag 5685467  T
Q  315 ta 316  Q
    ||    
T  5685468 ta 5685469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 230
Target Start/End: Original strand, 12473651 - 12473684
Alignment:
Q  197 gtcctatttataagagaaatttaggtcaacaaaa 230  Q
    ||||||||||||||||||||||||||||| ||||    
T  12473651 gtcctatttataagagaaatttaggtcaataaaa 12473684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 317
Target Start/End: Complemental strand, 13043802 - 13043757
Alignment:
Q  272 ttttgttgacccaaaattctcttataaataggaccggagggagtaa 317  Q
    ||||||||||| ||| ||||||||||||||| |||||||| |||||    
T  13043802 ttttgttgacctaaatttctcttataaatagaaccggaggtagtaa 13043757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 260 - 308
Target Start/End: Original strand, 6069014 - 6069062
Alignment:
Q  260 aaatacatcaacttttgttgacccaaaattctcttataaataggaccgg 308  Q
    |||||||| |||||||||||||| |||  ||| ||||||||||||||||    
T  6069014 aaatacattaacttttgttgacctaaatatcttttataaataggaccgg 6069062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 297
Target Start/End: Complemental strand, 33393213 - 33393165
Alignment:
Q  249 aatttttaactaaatacatcaacttttgttgacccaaaattctcttata 297  Q
    |||||| ||||| |||||||||||||| ||||| |||| ||||||||||    
T  33393213 aattttaaactagatacatcaacttttattgactcaaatttctcttata 33393165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 124; Significance: 1e-63; HSPs: 66)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 181 - 316
Target Start/End: Original strand, 6552650 - 6552785
Alignment:
Q  181 tatactactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttga 280  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  6552650 tatattactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttga 6552749  T
Q  281 cccaaaattctcttataaataggaccggagggagta 316  Q
    ||||||||||||||||||||||||||||||||||||    
T  6552750 cccaaaattctcttataaataggaccggagggagta 6552785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 186 - 316
Target Start/End: Complemental strand, 54742 - 54612
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  54742 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 54643  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||||    
T  54642 aattctcttataaataggaccggagggagta 54612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 186 - 316
Target Start/End: Complemental strand, 2890292 - 2890162
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2890292 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 2890193  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||||    
T  2890192 aattctcttataaataggaccggagggagta 2890162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 186 - 316
Target Start/End: Complemental strand, 7785908 - 7785778
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  7785908 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 7785809  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||||    
T  7785808 aattctcttataaataggaccggagggagta 7785778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 186 - 316
Target Start/End: Complemental strand, 3304408 - 3304278
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  3304408 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 3304309  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||| ||||||||||||||||||||||||||    
T  3304308 aattttcttataaataggaccggagggagta 3304278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 186 - 316
Target Start/End: Complemental strand, 7805829 - 7805699
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  7805829 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgctgacccaa 7805730  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||||    
T  7805729 aattctcttataaataggaccggagggagta 7805699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 186 - 316
Target Start/End: Complemental strand, 39571333 - 39571203
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  39571333 tactacctccggtcctatttataagagaaatttagatcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 39571234  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||||    
T  39571233 aattctcttataaataggaccggagggagta 39571203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 186 - 316
Target Start/End: Complemental strand, 43199484 - 43199354
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  43199484 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccaaa 43199385  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||||    
T  43199384 aattctcttataaataggaccggagggagta 43199354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 186 - 316
Target Start/End: Complemental strand, 44498317 - 44498187
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  44498317 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttattgacccaa 44498218  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||||    
T  44498217 aattctcttataaataggaccggagggagta 44498187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 186 - 316
Target Start/End: Complemental strand, 12763784 - 12763654
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12763784 tactacctccggtcttatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 12763685  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||| ||||||||||||||||||||||||||    
T  12763684 aattatcttataaataggaccggagggagta 12763654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 186 - 316
Target Start/End: Complemental strand, 25601130 - 25601000
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  25601130 tactacctccgatcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacattaacttttgttgacccaa 25601031  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||||    
T  25601030 aattctcttataaataggaccggagggagta 25601000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 186 - 316
Target Start/End: Complemental strand, 32114605 - 32114475
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  32114605 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaatttttgttgacccaa 32114506  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||| ||||||||||||||||||||||||||    
T  32114505 aattttcttataaataggaccggagggagta 32114475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 186 - 316
Target Start/End: Complemental strand, 32211493 - 32211363
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  32211493 tactacctccggtcctatttataagagaaatttaggtcaacaaaaatgaatgtatttggactgaatttttaactagatacatcaatttttgttgacccaa 32211394  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||||    
T  32211393 aattctcttataaataggaccggagggagta 32211363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 186 - 316
Target Start/End: Complemental strand, 33289391 - 33289261
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33289391 tactacctccggtcctatttataagagaaatttagatcaacataagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 33289292  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||||    
T  33289291 aattctcttataaataggaccggagggagta 33289261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 192 - 317
Target Start/End: Original strand, 31654619 - 31654744
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  31654619 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 31654718  T
Q  292 cttataaataggaccggagggagtaa 317  Q
     ||||||||||||||||||| |||||    
T  31654719 tttataaataggaccggaggaagtaa 31654744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 186 - 310
Target Start/End: Complemental strand, 12343270 - 12343146
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  12343270 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccaaa 12343171  T
Q  286 aattctcttataaataggaccggag 310  Q
    |||||||||||||||||||||||||    
T  12343170 aattctcttataaataggaccggag 12343146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 186 - 316
Target Start/End: Complemental strand, 15888482 - 15888352
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  15888482 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgacccaa 15888383  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    ||||||||||||||||| || ||||||||||    
T  15888382 aattctcttataaatagaactggagggagta 15888352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 186 - 316
Target Start/End: Original strand, 7012171 - 7012301
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  7012171 tactacctccggtcctatttataagagaaatttagatcaacaaaagtgaatatatttggactgaatttttaactagatacatcaacttttgttgatccaa 7012270  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||| ||||    
T  7012271 aattctcttataaataggaccggaggaagta 7012301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 186 - 316
Target Start/End: Original strand, 13578857 - 13578987
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| |||| || |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  13578857 tactacctccagttctatttataagagaaatttaggtcaataaaagtgaatgtatttgaactgaatttttaactagatacatcaacttttgttgacccaa 13578956  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||| ||| ||| ||||||    
T  13578957 aattctcttataaatatgactggatggagta 13578987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 192 - 316
Target Start/End: Original strand, 8587176 - 8587300
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    |||||||||||||||||||||||| || |||||||||||||  |||||||| |||| |||||||||||| |||||||||||||| ||||| |||  ||||    
T  8587176 ctccggtcctatttataagagaaagtttggtcaacaaaagttgatgtattttgactaaatttttaactagatacatcaacttttattgactcaagtttct 8587275  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||| ||||||||| ||||    
T  8587276 cttataaataagaccggaggaagta 8587300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 192 - 316
Target Start/End: Original strand, 28463617 - 28463741
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    |||||||||||||||||||||||| || |||||||||||||  |||||||||||||||||||| ||| | ||| ||||||||| | |||||||| |||||    
T  28463617 ctccggtcctatttataagagaaagttgggtcaacaaaagttgatgtatttggactgaattttgaaccagatatatcaactttcggtgacccaatattct 28463716  T
Q  292 cttataaataggaccggagggagta 316  Q
       |||||||||| |||||||||||    
T  28463717 gcaataaataggatcggagggagta 28463741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 186 - 248
Target Start/End: Complemental strand, 4245711 - 4245649
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactg 248  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4245711 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactg 4245649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 192 - 316
Target Start/End: Original strand, 27422199 - 27422320
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    |||||||||||||||||||| ||| ||  ||||||||   |  |||||||||||||||||||||||| | ||||||  | ||||||||||||||| ||||    
T  27422199 ctccggtcctatttataagataaagttgagtcaacaa---ttcatgtatttggactgaatttttaaccagatacattcatttttgttgacccaaatttct 27422295  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||||||||| ||||||||    
T  27422296 cttataaataggaccgaagggagta 27422320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 198 - 309
Target Start/End: Complemental strand, 24692096 - 24691986
Alignment:
Q  198 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttata 297  Q
    |||||||||||||| ||| ||||||||||||||||  |||||| || |||||||||| ||| | ||| ||||||||||||||||||||| |||| ||| |    
T  24692096 tcctatttataagaaaaagttaggtcaacaaaagttgatgtatctgaactgaatttt-aaccagatatatcaacttttgttgacccaaatttcttttaaa 24691998  T
Q  298 aataggaccgga 309  Q
    ||||||||||||    
T  24691997 aataggaccgga 24691986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 192 - 301
Target Start/End: Original strand, 17006917 - 17007026
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||| |||||||||||||||||| || |||||||||||||  ||| || ||||||||||| ||||  | |||||||||||||| |||||  ||| ||||    
T  17006917 ctccgatcctatttataagagaaagttgggtcaacaaaagttgatggatctggactgaattgttaatcagatacatcaacttttattgactaaaatttct 17007016  T
Q  292 cttataaata 301  Q
    ||||||||||    
T  17007017 cttataaata 17007026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 192 - 301
Target Start/End: Complemental strand, 17570330 - 17570221
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||| |||||||||||||||||| || |||||||||||||  ||| || ||||||||||| ||||  | |||||||||||||| |||||  ||| ||||    
T  17570330 ctccgatcctatttataagagaaagttgggtcaacaaaagttgatggatctggactgaattgttaatcagatacatcaacttttattgactaaaatttct 17570231  T
Q  292 cttataaata 301  Q
    ||||||||||    
T  17570230 cttataaata 17570221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 260 - 316
Target Start/End: Complemental strand, 8587226 - 8587170
Alignment:
Q  260 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    ||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||    
T  8587226 aaatacatcaacttttgttgaccaaactttctcttataaataggaccggagggagta 8587170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 192 - 316
Target Start/End: Original strand, 33057600 - 33057724
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    |||||||||||||||||||| ||| || | ||||||||| |   |||||  ||| |||| ||||||| | ||||||||| ||||||||||| ||  ||||    
T  33057600 ctccggtcctatttataagacaaagttggatcaacaaaaattgttgtatccggagtgaaattttaaccagatacatcaatttttgttgaccaaactttct 33057699  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||| ||||||| ||||||    
T  33057700 cttataaataagaccggatggagta 33057724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 260 - 311
Target Start/End: Complemental strand, 28463667 - 28463616
Alignment:
Q  260 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagg 311  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  28463667 aaatacatcaacttttgttgacccaactttctcttataaataggaccggagg 28463616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 192 - 317
Target Start/End: Complemental strand, 6552779 - 6552654
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  6552779 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 6552680  T
Q  292 cttataaataggaccggagggagtaa 317  Q
    |||||||||||||||||||| |||||    
T  6552679 cttataaataggaccggaggtagtaa 6552654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 192 - 317
Target Start/End: Original strand, 12343146 - 12343271
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  12343146 ctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 12343245  T
Q  292 cttataaataggaccggagggagtaa 317  Q
    |||||||||||||||||||| |||||    
T  12343246 cttataaataggaccggaggtagtaa 12343271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 192 - 316
Target Start/End: Original strand, 54618 - 54742
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  54618 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 54717  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||||||||||||| ||||    
T  54718 cttataaataggaccggaggtagta 54742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 192 - 316
Target Start/End: Original strand, 2890168 - 2890292
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  2890168 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 2890267  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||||||||||||| ||||    
T  2890268 cttataaataggaccggaggtagta 2890292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 192 - 316
Target Start/End: Original strand, 7785784 - 7785908
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  7785784 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 7785883  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||||||||||||| ||||    
T  7785884 cttataaataggaccggaggtagta 7785908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 221 - 309
Target Start/End: Complemental strand, 13246889 - 13246801
Alignment:
Q  221 gtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccgga 309  Q
    ||||||||||||  |||||| |||||||||||||||   ||||||||  | ||||||||| ||||| ||||||||||||||||| ||||    
T  13246889 gtcaacaaaagttcatgtatctggactgaatttttagtcaaatacattcatttttgttgatccaaatttctcttataaataggatcgga 13246801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 192 - 316
Target Start/End: Original strand, 25601006 - 25601130
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| ||||||||||||| ||||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  25601006 ctccggtcctatttataagagaattttgggtcaacaaaagttaatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 25601105  T
Q  292 cttataaataggaccggagggagta 316  Q
    ||||||||||||| |||||| ||||    
T  25601106 cttataaataggatcggaggtagta 25601130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 192 - 316
Target Start/End: Complemental strand, 31654737 - 31654613
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    |||||||||||||||||| |||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  31654737 ctccggtcctatttataaaagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 31654638  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||    
T  31654637 cttataaataggaccggagggagta 31654613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 192 - 316
Target Start/End: Original strand, 43199360 - 43199484
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  43199360 ctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 43199459  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||||||||||||| ||||    
T  43199460 cttataaataggaccggaggtagta 43199484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 181 - 316
Target Start/End: Original strand, 3304273 - 3304408
Alignment:
Q  181 tatactactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttga 280  Q
    |||||||||  |||||||||||||||||||| || ||| |||||||||||||  |||||| | |    || ||    | ||||||||  |||||||||||    
T  3304273 tatactactccctccggtcctatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttga 3304372  T
Q  281 cccaaaattctcttataaataggaccggagggagta 316  Q
    || ||| |||||||||||||||||||||||| ||||    
T  3304373 cctaaatttctcttataaataggaccggaggtagta 3304408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 195 - 240
Target Start/End: Complemental strand, 27422311 - 27422266
Alignment:
Q  195 cggtcctatttataagagaaatttaggtcaacaaaagtgaatgtat 240  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||    
T  27422311 cggtcctatttataagagaaatttgggtcaacaaaaatgaatgtat 27422266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 192 - 317
Target Start/End: Original strand, 39571209 - 39571334
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||| | ||| ||||    
T  39571209 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttct 39571308  T
Q  292 cttataaataggaccggagggagtaa 317  Q
    |||||||||||||||||||| |||||    
T  39571309 cttataaataggaccggaggtagtaa 39571334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 316
Target Start/End: Original strand, 4245655 - 4245711
Alignment:
Q  260 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  4245655 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 4245711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 316
Target Start/End: Original strand, 7805773 - 7805829
Alignment:
Q  260 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  7805773 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 7805829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 316
Target Start/End: Original strand, 15888426 - 15888482
Alignment:
Q  260 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  15888426 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 15888482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 265 - 313
Target Start/End: Complemental strand, 17006962 - 17006914
Alignment:
Q  265 catcaacttttgttgacccaaaattctcttataaataggaccggaggga 313  Q
    |||||||||||||||||||||  ||||||||||||||||| ||||||||    
T  17006962 catcaacttttgttgacccaactttctcttataaataggatcggaggga 17006914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 265 - 313
Target Start/End: Original strand, 17570285 - 17570333
Alignment:
Q  265 catcaacttttgttgacccaaaattctcttataaataggaccggaggga 313  Q
    |||||||||||||||||||||  ||||||||||||||||| ||||||||    
T  17570285 catcaacttttgttgacccaactttctcttataaataggatcggaggga 17570333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 30171535 - 30171483
Alignment:
Q  263 tacatcaacttttgttgacccaaaattctcttataaataggaccggagggagt 315  Q
    ||||| ||||||||||||| |||||||||||| ||||||||| ||||||||||    
T  30171535 tacattaacttttgttgactcaaaattctcttgtaaataggatcggagggagt 30171483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 316
Target Start/End: Original strand, 32114549 - 32114605
Alignment:
Q  260 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  32114549 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 32114605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 316
Target Start/End: Original strand, 44498261 - 44498317
Alignment:
Q  260 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  44498261 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 44498317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 193 - 243
Target Start/End: Original strand, 13246801 - 13246851
Alignment:
Q  193 tccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttg 243  Q
    |||| ||||||||||||||||||||| | ||||||||| ||||||||||||    
T  13246801 tccgatcctatttataagagaaatttggatcaacaaaaatgaatgtatttg 13246851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 262 - 308
Target Start/End: Complemental strand, 15688084 - 15688038
Alignment:
Q  262 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 308  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  15688084 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 15688038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 198 - 300
Target Start/End: Complemental strand, 24203091 - 24202989
Alignment:
Q  198 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttata 297  Q
    |||||||||||||||||||||| ||||| ||||||| || ||||||   | |||||| ||| ||||||||||||  || |||||| |||  | |||||||    
T  24203091 tcctatttataagagaaatttatgtcaataaaagtggatatatttgatttaaattttgaaccaaatacatcaaccattattgaccaaaatatttcttata 24202992  T
Q  298 aat 300  Q
    |||    
T  24202991 aat 24202989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 316
Target Start/End: Original strand, 12763728 - 12763784
Alignment:
Q  260 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    ||||||||  ||||||||||||| ||| |||||||||||||| ||||||||| ||||    
T  12763728 aaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 12763784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 281
Target Start/End: Complemental strand, 28999163 - 28999083
Alignment:
Q  201 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgac 281  Q
    ||||||||| ||||| || ||||||||||| |  |||||| | ||||||||||||||||| |||| | ||||||| |||||    
T  28999163 tatttataaaagaaagtttggtcaacaaaaattgatgtatctagactgaatttttaactacatacgtaaacttttattgac 28999083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 316
Target Start/End: Original strand, 32211449 - 32211493
Alignment:
Q  272 ttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  32211449 ttttgttgacctaaatttctcttataaataggaccggaggtagta 32211493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 316
Target Start/End: Original strand, 33289267 - 33289391
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  |||| |||||| | ||| ||||    
T  33289267 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgatctaaatttct 33289366  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||||||||||||| ||||    
T  33289367 cttataaataggaccggaggtagta 33289391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 35564757 - 35564706
Alignment:
Q  249 aatttttaactaaatacatcaacttttgttgacccaaaattctcttataaat 300  Q
    |||||| ||||| ||||||||| |||||||||| ||||| ||||||||||||    
T  35564757 aattttgaactagatacatcaaattttgttgactcaaaaatctcttataaat 35564706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 316
Target Start/End: Complemental strand, 7012217 - 7012171
Alignment:
Q  270 acttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    ||||||||||| | ||| |||||||||||||||||||||||| ||||    
T  7012217 acttttgttgatctaaatttctcttataaataggaccggaggtagta 7012171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 262 - 316
Target Start/End: Original strand, 24692054 - 24692108
Alignment:
Q  262 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    ||||||||||||||||||||| ||  || |||||||||||||| || ||||||||    
T  24692054 atacatcaacttttgttgacctaactttttcttataaataggatcgaagggagta 24692108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 192 - 230
Target Start/End: Original strand, 32211369 - 32211407
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaa 230  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  32211369 ctccggtcctatttataagagaattttgggtcaacaaaa 32211407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 262 - 316
Target Start/End: Complemental strand, 33057648 - 33057594
Alignment:
Q  262 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    ||||| ||| ||||||||| ||||  || ||||||||||||||||||||||||||    
T  33057648 atacaacaatttttgttgatccaactttgtcttataaataggaccggagggagta 33057594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 192 - 232
Target Start/End: Complemental strand, 7012295 - 7012255
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagt 232  Q
    ||||||||||||||||||||||| ||| | |||||||||||    
T  7012295 ctccggtcctatttataagagaattttggatcaacaaaagt 7012255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 192 - 232
Target Start/End: Original strand, 7805705 - 7805745
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagt 232  Q
    ||||||||||||||||||||||| ||| ||||| |||||||    
T  7805705 ctccggtcctatttataagagaattttgggtcagcaaaagt 7805745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 192 - 232
Target Start/End: Original strand, 12763660 - 12763700
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagt 232  Q
    |||||||||||||||||||| || ||| |||||||||||||    
T  12763660 ctccggtcctatttataagataattttgggtcaacaaaagt 12763700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 179 - 211
Target Start/End: Complemental strand, 36366180 - 36366148
Alignment:
Q  179 tgtatactactatctccggtcctatttataaga 211  Q
    |||||||||||| ||||||||||||||||||||    
T  36366180 tgtatactactacctccggtcctatttataaga 36366148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 192 - 232
Target Start/End: Original strand, 44498193 - 44498233
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagt 232  Q
    ||||||||||||||||||||||| ||| |||||| ||||||    
T  44498193 ctccggtcctatttataagagaattttgggtcaataaaagt 44498233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 124; Significance: 1e-63; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 181 - 316
Target Start/End: Original strand, 7240744 - 7240879
Alignment:
Q  181 tatactactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttga 280  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  7240744 tataatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttga 7240843  T
Q  281 cccaaaattctcttataaataggaccggagggagta 316  Q
    ||||||||||||||||||||||||||||||||||||    
T  7240844 cccaaaattctcttataaataggaccggagggagta 7240879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 186 - 317
Target Start/End: Original strand, 46840860 - 46840991
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  46840860 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 46840959  T
Q  286 aattctcttataaataggaccggagggagtaa 317  Q
    ||||||||||||||||||||||||||||||||    
T  46840960 aattctcttataaataggaccggagggagtaa 46840991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 186 - 316
Target Start/End: Complemental strand, 1738577 - 1738447
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1738577 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 1738478  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||||    
T  1738477 aattctcttataaataggaccggagggagta 1738447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 184 - 317
Target Start/End: Complemental strand, 23314271 - 23314138
Alignment:
Q  184 actactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgaccc 283  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  23314271 actactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatatatcaacttttgttgaccc 23314172  T
Q  284 aaaattctcttataaataggaccggagggagtaa 317  Q
    ||||||||||||||||||||||||||||||||||    
T  23314171 aaaattctcttataaataggaccggagggagtaa 23314138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 186 - 325
Target Start/End: Complemental strand, 94448 - 94309
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  94448 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggacagaatttttaactagatacatcaacttttgttgacccaa 94349  T
Q  286 aattctcttataaataggaccggagggagtaaaatctaac 325  Q
    ||||||||||||||||||| ||||||||||| ||| ||||    
T  94348 aattctcttataaataggatcggagggagtacaatttaac 94309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 181 - 316
Target Start/End: Original strand, 9268751 - 9268886
Alignment:
Q  181 tatactactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttga 280  Q
    |||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  9268751 tataatactacctctggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttga 9268850  T
Q  281 cccaaaattctcttataaataggaccggagggagta 316  Q
    ||||||||||||||||||||||||||||||||||||    
T  9268851 cccaaaattctcttataaataggaccggagggagta 9268886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 181 - 316
Target Start/End: Complemental strand, 31319534 - 31319399
Alignment:
Q  181 tatactactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttga 280  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  31319534 tatattactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttga 31319435  T
Q  281 cccaaaattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||| |||||||||||||    
T  31319434 cccaaaattctcttataaatagaaccggagggagta 31319399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 186 - 324
Target Start/End: Complemental strand, 1565859 - 1565721
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1565859 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 1565760  T
Q  286 aattctcttataaataggaccggagggagtaaaatctaa 324  Q
    ||||||||||||||||| |||| |||||||| |||||||    
T  1565759 aattctcttataaatagaaccgaagggagtataatctaa 1565721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 186 - 316
Target Start/End: Original strand, 7482225 - 7482355
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  7482225 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttgaactgaatttttaactagatacatcaacttttgttgacccaa 7482324  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||||    
T  7482325 aattctcttataaataggaccggagggagta 7482355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 186 - 316
Target Start/End: Complemental strand, 38064043 - 38063913
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  38064043 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 38063944  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    ||||||||||||||||||||| |||||||||    
T  38063943 aattctcttataaataggaccagagggagta 38063913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 192 - 316
Target Start/End: Original strand, 22285705 - 22285829
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  22285705 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgacccaaaattct 22285804  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||    
T  22285805 cttataaataggaccggagggagta 22285829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 186 - 316
Target Start/End: Original strand, 36583395 - 36583525
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  36583395 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggacttaatttttaactagatacatcaacttttgttgacccaa 36583494  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    ||||||||||||||||||| |||||||||||    
T  36583495 aattctcttataaataggatcggagggagta 36583525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 192 - 323
Target Start/End: Complemental strand, 36016320 - 36016189
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  36016320 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgacccaaaattct 36016221  T
Q  292 cttataaataggaccggagggagtaaaatcta 323  Q
    ||||||||||||||| || ||||||| |||||    
T  36016220 cttataaataggaccagatggagtaatatcta 36016189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 181 - 316
Target Start/End: Original strand, 38441455 - 38441590
Alignment:
Q  181 tatactactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttga 280  Q
    |||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  38441455 tatagtactacctccggtcctatttataagagaaatttatgtcaacaaaagtgaatgtatttgaactgaatttttaactagatacatcaacttttgttga 38441554  T
Q  281 cccaaaattctcttataaataggaccggagggagta 316  Q
    ||||||||||||||||||||||||||||||| ||||    
T  38441555 cccaaaattctcttataaataggaccggaggaagta 38441590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 186 - 316
Target Start/End: Complemental strand, 28536881 - 28536751
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||| ||||    
T  28536881 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggaatgaatttttaactagatacatcaacttttattgatccaa 28536782  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||||    
T  28536781 aattctcttataaataggaccggagggagta 28536751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 313 - 424
Target Start/End: Complemental strand, 46063230 - 46063119
Alignment:
Q  313 agtaaaatctaaccctcctatgttgtttttcaattttattcatgtcttactgattggtagttactcatctattatgttctctgtagtattttgaatgtgt 412  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  46063230 agtaaaatctaaccctcctatgttgtttttcaattttattcatgtcttactgattggtagttactcatctattatgttctctatagtattttgaatgtgt 46063131  T
Q  413 tttaaacattat 424  Q
    ||||||||||||    
T  46063130 tttaaacattat 46063119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 186 - 316
Target Start/End: Original strand, 4790248 - 4790378
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| |||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||| |||||||||    
T  4790248 tactacctccggtcctatttataagaaaaatttaggtcaacaaaaatgaatgtatttggactaaatttttaactagatacatcaacttttattgacccaa 4790347  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||| ||||    
T  4790348 aattctcttataaataggaccggaggaagta 4790378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 202 - 310
Target Start/End: Original strand, 33418392 - 33418500
Alignment:
Q  202 atttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaata 301  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  33418392 atttttaagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgacccaaaattctcttataaata 33418491  T
Q  302 ggaccggag 310  Q
    |||||||||    
T  33418492 ggaccggag 33418500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 186 - 309
Target Start/End: Complemental strand, 40840249 - 40840126
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    |||| |||||||||||||||| |||||||| ||| || ||||||| | |||||||||||||||||||||||||||| |||||||||||||||||||  ||    
T  40840249 tactctctccggtcctatttagaagagaaagttaagttaacaaaaatcaatgtatttggactgaatttttaactaagtacatcaacttttgttgacaaaa 40840150  T
Q  286 aattctcttataaataggaccgga 309  Q
    | ||||||||||||||||||||||    
T  40840149 atttctcttataaataggaccgga 40840126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 196 - 317
Target Start/End: Original strand, 9575419 - 9575540
Alignment:
Q  196 ggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctta 295  Q
    |||||||||| ||||||||| || ||||||||||||| || |||||| ||||||||||||||||| ||||||||| ||||||||||| ||  ||||||||    
T  9575419 ggtcctatttgtaagagaaagttgggtcaacaaaagttaacgtatttagactgaatttttaactagatacatcaagttttgttgaccaaactttctctta 9575518  T
Q  296 taaataggaccggagggagtaa 317  Q
    |||||||||||| |||||||||    
T  9575519 taaataggaccgaagggagtaa 9575540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 183 - 309
Target Start/End: Complemental strand, 7269538 - 7269412
Alignment:
Q  183 tactactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacc 282  Q
    |||||||  |||||||| ||||||||||| ||| || ||||||||||| |  |||||| |  |||||||||||||| | || |||||||||||||| |||    
T  7269538 tactactccctccggtcttatttataagaaaaagttgggtcaacaaaaattgatgtatctaaactgaatttttaaccagatgcatcaacttttgttaacc 7269439  T
Q  283 caaaattctcttataaataggaccgga 309  Q
    |||  ||||||||||||||||||||||    
T  7269438 caactttctcttataaataggaccgga 7269412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 198 - 316
Target Start/End: Original strand, 7661088 - 7661206
Alignment:
Q  198 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttata 297  Q
    |||||||||||||||||||||| ||||| ||||||  |||||  |||    ||  ||  |||| |||||||||||||||||||||||||  |||| ||||    
T  7661088 tcctatttataagagaaatttatgtcaataaaagttgatgtagctggtaaaaaaattggactagatacatcaacttttgttgacccaaatgtctcatata 7661187  T
Q  298 aataggaccggagggagta 316  Q
    ||||||||| |||||||||    
T  7661188 aataggaccagagggagta 7661206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 192 - 316
Target Start/End: Original strand, 1738453 - 1738577
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  1738453 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 1738552  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||||||||||||| ||||    
T  1738553 cttataaataggaccggaggtagta 1738577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 192 - 316
Target Start/End: Complemental strand, 7240873 - 7240749
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  7240873 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 7240774  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||||||||||||| ||||    
T  7240773 cttataaataggaccggaggtagta 7240749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 192 - 316
Target Start/End: Complemental strand, 22285823 - 22285699
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| |      || ||    | ||||||||  ||||||||||||| ||| ||||    
T  22285823 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 22285724  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||    
T  22285723 cttataaataggaccggagggagta 22285699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 260 - 316
Target Start/End: Original strand, 36016270 - 36016326
Alignment:
Q  260 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  36016270 aaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 36016326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 192 - 316
Target Start/End: Complemental strand, 46840984 - 46840860
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  46840984 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 46840885  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||||||||||||| ||||    
T  46840884 cttataaataggaccggaggtagta 46840860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 192 - 310
Target Start/End: Original strand, 94324 - 94442
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||| ||||||||||||||||| ||| |||||||||||||  |||||| | |    || || |  | ||||||||  ||||||||||||| ||| ||||    
T  94324 ctccgatcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattctgtccaaatacattcacttttgttgacctaaatttct 94423  T
Q  292 cttataaataggaccggag 310  Q
    |||||||||||||||||||    
T  94424 cttataaataggaccggag 94442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 183 - 317
Target Start/End: Original strand, 31319396 - 31319530
Alignment:
Q  183 tactactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacc 282  Q
    |||||||  ||||||| ||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  |||||||||||||    
T  31319396 tactactccctccggttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacc 31319495  T
Q  283 caaaattctcttataaataggaccggagggagtaa 317  Q
     ||| |||||||||||||||||||||||| |||||    
T  31319496 taaatttctcttataaataggaccggaggtagtaa 31319530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 192 - 316
Target Start/End: Complemental strand, 7482349 - 7482225
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaact-aaatacatcaacttttgttgacccaaaattc 290  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |  | ||  || |  | ||||||||  ||||||||||||| ||| |||    
T  7482349 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagt-taaaaattcagttcaaatacattcacttttgttgacctaaatttc 7482251  T
Q  291 tcttataaataggaccggagggagta 316  Q
    ||||||||||||||||||||| ||||    
T  7482250 tcttataaataggaccggaggtagta 7482225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 316
Target Start/End: Original strand, 1565803 - 1565859
Alignment:
Q  260 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  1565803 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 1565859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 196 - 316
Target Start/End: Complemental strand, 7661196 - 7661076
Alignment:
Q  196 ggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctta 295  Q
    ||||||||||||| |||| |||| |||||||||||||  |||||| | | |  | ||||| || |  ||||||||||||| |||||  ||| ||||||||    
T  7661196 ggtcctatttatatgagacatttgggtcaacaaaagttgatgtatctagtccaatttttttaccagctacatcaacttttattgacataaatttctctta 7661097  T
Q  296 taaataggaccggagggagta 316  Q
    ||||||||| || ||||||||    
T  7661096 taaataggatcgaagggagta 7661076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 316
Target Start/End: Complemental strand, 9268880 - 9268756
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  9268880 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 9268781  T
Q  292 cttataaataggaccggagggagta 316  Q
    ||||||||||||||| |||| ||||    
T  9268780 cttataaataggaccagaggtagta 9268756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 316
Target Start/End: Original strand, 23314213 - 23314269
Alignment:
Q  260 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  23314213 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 23314269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 316
Target Start/End: Original strand, 28536825 - 28536881
Alignment:
Q  260 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  28536825 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 28536881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 316
Target Start/End: Complemental strand, 36583519 - 36583395
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||| ||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  36583519 ctccgatcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattaagtccaaatacattcacttttgttgacctaaatttct 36583420  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||||||||||||| ||||    
T  36583419 cttataaataggaccggaggtagta 36583395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 316
Target Start/End: Original strand, 38063987 - 38064043
Alignment:
Q  260 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  38063987 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 38064043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 262 - 316
Target Start/End: Original strand, 7269481 - 7269535
Alignment:
Q  262 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    ||||||||| ||||||||||||||  || ||||||||||| ||||||||||||||    
T  7269481 atacatcaatttttgttgacccaactttttcttataaataagaccggagggagta 7269535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 316
Target Start/End: Complemental strand, 9575467 - 9575409
Alignment:
Q  258 ctaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    |||||||| | |||||||||||||||||  |||||||| |||||||||| |||||||||    
T  9575467 ctaaatacgttaacttttgttgacccaactttctcttacaaataggaccagagggagta 9575409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 192 - 316
Target Start/End: Complemental strand, 38441584 - 38441460
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaact-aaatacatcaacttttgttgacccaaaattc 290  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |  | ||  || |  | ||||||||  ||||||||||||  ||| |||    
T  38441584 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagt-taaaaattcagttcaaatacattcacttttgttgacataaatttc 38441486  T
Q  291 tcttataaataggaccggagggagta 316  Q
    ||||||||||||||||||||| ||||    
T  38441485 tcttataaataggaccggaggtagta 38441460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 262 - 315
Target Start/End: Original strand, 46877666 - 46877719
Alignment:
Q  262 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagt 315  Q
    |||||| |||||||||||||||||  |||||||||| ||||||||||| |||||    
T  46877666 atacattaacttttgttgacccaactttctcttatatataggaccggatggagt 46877719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 316
Target Start/End: Complemental strand, 4790372 - 4790248
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| |||||| ||||||  |||||| | |    || |||   | ||||||||  | ||||||||||| ||| || |    
T  4790372 ctccggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaatttagtccaaatacattcatttttgttgacctaaattttt 4790273  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||||||||||||| ||||    
T  4790272 cttataaataggaccggaggtagta 4790248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 232
Target Start/End: Original strand, 23314145 - 23314185
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagt 232  Q
    ||||||||||||||||||||||| ||| |||||||||||||    
T  23314145 ctccggtcctatttataagagaattttgggtcaacaaaagt 23314185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 316
Target Start/End: Original strand, 24710743 - 24710799
Alignment:
Q  260 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||    ||| ||||||| ||||||||||||||||    
T  24710743 aaatacatcaacttttgttgacccagttgtcttttataaaaaggaccggagggagta 24710799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 309
Target Start/End: Complemental strand, 29993291 - 29993251
Alignment:
Q  269 aacttttgttgacccaaaattctcttataaataggaccgga 309  Q
    ||||||||||||||||| ||||||||| |||||||||||||    
T  29993291 aacttttgttgacccaacattctcttacaaataggaccgga 29993251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 232
Target Start/End: Complemental strand, 33418500 - 33418460
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagt 232  Q
    ||||||||||||||||||||||| ||| |||||||||||||    
T  33418500 ctccggtcctatttataagagaattttgggtcaacaaaagt 33418460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 232
Target Start/End: Original strand, 40840126 - 40840165
Alignment:
Q  193 tccggtcctatttataagagaaatttaggtcaacaaaagt 232  Q
    ||||||||||||||||||||||||||  ||||||||||||    
T  40840126 tccggtcctatttataagagaaatttttgtcaacaaaagt 40840165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 240
Target Start/End: Complemental strand, 46877713 - 46877666
Alignment:
Q  193 tccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtat 240  Q
    ||||||||||| ||||||||||| || ||||||||||||| |||||||    
T  46877713 tccggtcctatatataagagaaagttgggtcaacaaaagttaatgtat 46877666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 265 - 319
Target Start/End: Original strand, 28411051 - 28411105
Alignment:
Q  265 catcaacttttgttgacccaaaattctcttataaataggaccggagggagtaaaa 319  Q
    ||||||||||| ||||||| || ||| |||||||||||||||| ||| |||||||    
T  28411051 catcaacttttattgacccgaatttcccttataaataggaccgaaggaagtaaaa 28411105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 318
Target Start/End: Original strand, 27809226 - 27809276
Alignment:
Q  266 atcaacttttgttgacccaaaattctcttataaataggaccggagggagtaaa 318  Q
    ||||||||||||||||||||| || |||| |||||||  ||||||||||||||    
T  27809226 atcaacttttgttgacccaaatttttcttttaaatag--ccggagggagtaaa 27809276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 288 - 316
Target Start/End: Complemental strand, 5347750 - 5347722
Alignment:
Q  288 ttctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||    
T  5347750 ttctcttataaataggaccggagggagta 5347722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 196 - 232
Target Start/End: Original strand, 36016206 - 36016242
Alignment:
Q  196 ggtcctatttataagagaaatttaggtcaacaaaagt 232  Q
    ||||||||||||||||||| ||| |||||||||||||    
T  36016206 ggtcctatttataagagaattttgggtcaacaaaagt 36016242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 189 - 301
Target Start/End: Complemental strand, 36033353 - 36033241
Alignment:
Q  189 tatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaat 288  Q
    ||||| || |||||||||||| | ||| || || |||||||| |  |||| | || | ||||||||| |  | ||||||||||||||||||||| ||| |    
T  36033353 tatctacgatcctatttataaaataaagtttggccaacaaaaatttatgtgtctgaattgaatttttgatcagatacatcaacttttgttgacctaaatt 36033254  T
Q  289 tctcttataaata 301  Q
    | |||||||||||    
T  36033253 tatcttataaata 36033241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 196 - 232
Target Start/End: Original strand, 38063923 - 38063959
Alignment:
Q  196 ggtcctatttataagagaaatttaggtcaacaaaagt 232  Q
    ||||||||||||||||||| ||| |||||||||||||    
T  38063923 ggtcctatttataagagaattttgggtcaacaaaagt 38063959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 124; Significance: 1e-63; HSPs: 69)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 186 - 317
Target Start/End: Original strand, 15896842 - 15896973
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15896842 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 15896941  T
Q  286 aattctcttataaataggaccggagggagtaa 317  Q
    ||||||||||||||||||||||||||||||||    
T  15896942 aattctcttataaataggaccggagggagtaa 15896973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 186 - 316
Target Start/End: Original strand, 3055558 - 3055688
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  3055558 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 3055657  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||||    
T  3055658 aattctcttataaataggaccggagggagta 3055688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 186 - 316
Target Start/End: Complemental strand, 13197840 - 13197710
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13197840 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 13197741  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||||    
T  13197740 aattctcttataaataggaccggagggagta 13197710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 186 - 316
Target Start/End: Complemental strand, 37990143 - 37990013
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  37990143 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 37990044  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||||    
T  37990043 aattctcttataaataggaccggagggagta 37990013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 186 - 316
Target Start/End: Complemental strand, 41478769 - 41478639
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  41478769 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 41478670  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||||    
T  41478669 aattctcttataaataggaccggagggagta 41478639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 186 - 316
Target Start/End: Original strand, 44398686 - 44398816
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  44398686 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 44398785  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||||    
T  44398786 aattctcttataaataggaccggagggagta 44398816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 186 - 316
Target Start/End: Complemental strand, 9047885 - 9047755
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9047885 tactatctccggtcatatttataagagaaatttaggtcaaaaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 9047786  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||||    
T  9047785 aattctcttataaataggaccggagggagta 9047755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 186 - 316
Target Start/End: Complemental strand, 16243913 - 16243783
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  16243913 tactatctccggtcctatttataagaaaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 16243814  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||| ||||||    
T  16243813 aattctcttataaataggaccggatggagta 16243783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 186 - 316
Target Start/End: Original strand, 44397547 - 44397677
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  44397547 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 44397646  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    ||||||||||||||||||||||| |||||||    
T  44397647 aattctcttataaataggaccggggggagta 44397677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 192 - 320
Target Start/End: Original strand, 15372232 - 15372360
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  15372232 ctccagtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaacgagatacatcaacttttgttgacccaaaattct 15372331  T
Q  292 cttataaataggaccggagggagtaaaat 320  Q
    |||||||||||||||||||||||||||||    
T  15372332 cttataaataggaccggagggagtaaaat 15372360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 185 - 316
Target Start/End: Complemental strand, 37666741 - 37666610
Alignment:
Q  185 ctactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgaccca 284  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||    
T  37666741 ctactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttgaactgaatttttaactagatacatcaactttagttgaccca 37666642  T
Q  285 aaattctcttataaataggaccggagggagta 316  Q
    ||||||||||||||||||||||||||||||||    
T  37666641 aaattctcttataaataggaccggagggagta 37666610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 186 - 316
Target Start/End: Complemental strand, 6648649 - 6648519
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  6648649 tactacctccggtcctatttataagagaaatttaggtcaacataaatgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 6648550  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||||    
T  6648549 aattctcttataaataggaccggagggagta 6648519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 186 - 316
Target Start/End: Complemental strand, 16044447 - 16044317
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||    
T  16044447 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttgaactgaatttttaactagatacatcaactttagttgacccaa 16044348  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||||    
T  16044347 aattctcttataaataggaccggagggagta 16044317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 186 - 316
Target Start/End: Complemental strand, 38917652 - 38917522
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  38917652 tactacctccggtcctatttataagataaatttaggtcaataaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 38917553  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||||    
T  38917552 aattctcttataaataggaccggagggagta 38917522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 186 - 317
Target Start/End: Complemental strand, 12338067 - 12337936
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12338067 tactacctccggttctatttataagaaaaatttaggtcaacaaaaatgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 12337968  T
Q  286 aattctcttataaataggaccggagggagtaa 317  Q
    ||||||||||||||||||||||||||||||||    
T  12337967 aattctcttataaataggaccggagggagtaa 12337936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 186 - 316
Target Start/End: Original strand, 13344484 - 13344614
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  13344484 tactacctccggttctatttataagagaaatttaggtcaacaaaaatgaatgtatttggactgaatttttaactagatacatcaacttttgttgatccaa 13344583  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||||    
T  13344584 aattctcttataaataggaccggagggagta 13344614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 197 - 316
Target Start/End: Complemental strand, 41493015 - 41492896
Alignment:
Q  197 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttat 296  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  41493015 gtcctatttataaaagaaatttaggtcaacaaaagtgaatgtatttggacagaatttttaactagatacatcaacttttgttgacccaaatttctcttat 41492916  T
Q  297 aaataggaccggagggagta 316  Q
    ||||||||||||||||||||    
T  41492915 aaataggaccggagggagta 41492896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 192 - 316
Target Start/End: Complemental strand, 30099306 - 30099182
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||    
T  30099306 ctccgatcctatttataagagaaatttaggtcaacaaaaatgaatgtatttggattgaatttttaattagatacatcaacttttgttgacccaaaattct 30099207  T
Q  292 cttataaataggaccggagggagta 316  Q
    || ||||||||||||||||||||||    
T  30099206 ctaataaataggaccggagggagta 30099182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 186 - 297
Target Start/End: Complemental strand, 4684062 - 4683951
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||| ||    
T  4684062 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgtaaaccgaa 4683963  T
Q  286 aattctcttata 297  Q
    ||||||||||||    
T  4683962 aattctcttata 4683951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 192 - 301
Target Start/End: Complemental strand, 12170523 - 12170414
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||| ||||||||| |||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||    
T  12170523 ctccgatcctatttacaagagaaaattaggtcaataaaagttaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaagtttct 12170424  T
Q  292 cttataaata 301  Q
    ||||||||||    
T  12170423 cttataaata 12170414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 214 - 313
Target Start/End: Complemental strand, 44804680 - 44804581
Alignment:
Q  214 aatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 313  Q
    |||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||| ||  ||||||||||||||||||||||||||||||    
T  44804680 aatttaggtcaacataaatgaatgtatttggactgaatttttaactagatacatcaacttttgttaacttaaaattctcttataaataggaccggaggga 44804581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 205 - 313
Target Start/End: Original strand, 16734802 - 16734910
Alignment:
Q  205 tataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaatagga 304  Q
    ||||||||||| || |||||||||||||  |||||| ||||||||||||||||| ||||||||||||||||||| || |||  |||||||||||||||||    
T  16734802 tataagagaaagtttggtcaacaaaagttgatgtatctggactgaatttttaaccaaatacatcaacttttgtttactcaactttctcttataaatagga 16734901  T
Q  305 ccggaggga 313  Q
    | |||||||    
T  16734902 ctggaggga 16734910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 197 - 316
Target Start/End: Complemental strand, 13724221 - 13724102
Alignment:
Q  197 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttat 296  Q
    |||||||||||||| || |||  |||||||||||||  |||||| ||| |  | |||||||| ||||||||||||||||||||||| | |  |||||| |    
T  13724221 gtcctatttataagcgatattctggtcaacaaaagttgatgtatctggtccaattttttaaccaaatacatcaacttttgttgacctagatgtctcttgt 13724122  T
Q  297 aaataggaccggagggagta 316  Q
    ||||||||||||||||||||    
T  13724121 aaataggaccggagggagta 13724102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 186 - 307
Target Start/End: Original strand, 31150653 - 31150769
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    |||| |||||| |||||||||||||||||| ||  ||||||||||||  ||||||||||||| |||||||||||| |||||      ||||||||||||     
T  31150653 tactctctccgatcctatttataagagaaagttgcgtcaacaaaagtttatgtatttggactaaatttttaactagataca-----atttgttgacccat 31150747  T
Q  286 aattctcttataaataggaccg 307  Q
      ||||||||||||||||||||    
T  31150748 gtttctcttataaataggaccg 31150769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 217 - 276
Target Start/End: Original strand, 41453090 - 41453149
Alignment:
Q  217 ttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttg 276  Q
    ||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  41453090 ttaggtcaataaaagttaatgtatttggactgaatttttaacaaaatacatcaacttttg 41453149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 182 - 316
Target Start/End: Original strand, 13197706 - 13197840
Alignment:
Q  182 atactactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgac 281  Q
    ||||||||  ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||    
T  13197706 atactactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgac 13197805  T
Q  282 ccaaaattctcttataaataggaccggagggagta 316  Q
    | ||| |||||||||||||||||||||||| ||||    
T  13197806 ctaaatttctcttataaataggaccggaggtagta 13197840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 192 - 316
Target Start/End: Complemental strand, 3055682 - 3055558
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  3055682 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 3055583  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||||||||||||| ||||    
T  3055582 cttataaataggaccggaggtagta 3055558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 192 - 316
Target Start/End: Complemental strand, 15372350 - 15372226
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  15372350 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctcgttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 15372251  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||||||| ||||||||||    
T  15372250 cttataaataggactggagggagta 15372226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 192 - 316
Target Start/End: Complemental strand, 15896966 - 15896842
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  15896966 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 15896867  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||||||||||||| ||||    
T  15896866 cttataaataggaccggaggtagta 15896842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 192 - 316
Target Start/End: Original strand, 37990019 - 37990143
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  37990019 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 37990118  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||||||||||||| ||||    
T  37990119 cttataaataggaccggaggtagta 37990143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 192 - 316
Target Start/End: Original strand, 41478645 - 41478769
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  41478645 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 41478744  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||||||||||||| ||||    
T  41478745 cttataaataggaccggaggtagta 41478769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 192 - 316
Target Start/End: Complemental strand, 44398810 - 44398686
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  44398810 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 44398711  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||||||||||||| ||||    
T  44398710 cttataaataggaccggaggtagta 44398686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 197 - 316
Target Start/End: Complemental strand, 23227391 - 23227272
Alignment:
Q  197 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttat 296  Q
    ||||||||||||||||| |||| |||||||||||||  |||||||||| |  |||| |||   | ||||||||  ||||||||||| |||  | ||||||    
T  23227391 gtcctatttataagagacattttggtcaacaaaagttgatgtatttggtccaaattcttagtcagatacatcacattttgttgacctaaatatttcttat 23227292  T
Q  297 aaataggaccggagggagta 316  Q
    ||||| |||| |||||||||    
T  23227291 aaatatgaccagagggagta 23227272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 191 - 281
Target Start/End: Original strand, 36688887 - 36688977
Alignment:
Q  191 tctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgac 281  Q
    |||| |||||||||||||||||||| || |||||||||| ||  |||||| | | ||||||||| ||| | ||||||||| ||||||||||    
T  36688887 tctctggtcctatttataagagaaagtttggtcaacaaacgttgatgtatcttgtctgaattttaaacaagatacatcaatttttgttgac 36688977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 194 - 316
Target Start/End: Complemental strand, 44397669 - 44397547
Alignment:
Q  194 ccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctct 293  Q
    ||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||||    
T  44397669 ccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctct 44397570  T
Q  294 tataaataggaccggagggagta 316  Q
    |||||||||||||||||| ||||    
T  44397569 tataaataggaccggaggtagta 44397547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 260 - 317
Target Start/End: Original strand, 16044391 - 16044448
Alignment:
Q  260 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtaa 317  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  16044391 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtaa 16044448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 192 - 305
Target Start/End: Original strand, 41492902 - 41493015
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||||||| |||||||||||||  |||||| | |    || || |  | ||||||||  ||||||||||||| ||| ||||    
T  41492902 ctccggtcctatttataagagaaatttgggtcaacaaaagttgatgtatctagttaaaaattctgtccaaatacattcacttttgttgacctaaatttct 41493001  T
Q  292 cttataaataggac 305  Q
     |||||||||||||    
T  41493002 tttataaataggac 41493015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 316
Target Start/End: Original strand, 4684006 - 4684062
Alignment:
Q  260 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  4684006 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 4684062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 316
Target Start/End: Original strand, 13724108 - 13724232
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||| |||||| || |||||||||||||||  ||||||||||    ||  ||  || | |||||||||||||||||||||  ||  ||     
T  13724108 ctccggtcctatttacaagagacatctaggtcaacaaaagttgatgtatttggttaaaaaattggaccagatacatcaacttttgttgaccagaatatcg 13724207  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||||||| | ||||||||    
T  13724208 cttataaataggactgtagggagta 13724232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 316
Target Start/End: Original strand, 37666684 - 37666740
Alignment:
Q  260 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  37666684 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 37666740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 195 - 315
Target Start/End: Original strand, 45294333 - 45294452
Alignment:
Q  195 cggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctt 294  Q
    |||||||||||| | |||| ||||   ||||||||||| |||||||| ||||| | |||||||| |||||| | |||||||||||||| ||| || ||||    
T  45294333 cggtcctatttacaggagacatttcattcaacaaaagttaatgtatt-ggactaattttttaaccaaatactttaacttttgttgacctaaatttttctt 45294431  T
Q  295 ataaataggaccggagggagt 315  Q
    | |||||  |||| |||||||    
T  45294432 aaaaataaaaccgaagggagt 45294452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 186 - 305
Target Start/End: Original strand, 15271054 - 15271173
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    |||| |||||| || ||||||||||||| ||||    ||||||||||  |||||| | | || |||||| ||||| |||| | |||||||||| ||||||    
T  15271054 tactctctccgatcttatttataagagacatttgaagcaacaaaagttgatgtatctagtctaaattttgaactacatactttaacttttgttcacccaa 15271153  T
Q  286 aattctcttataaataggac 305  Q
    |  |||||||||||||||||    
T  15271154 acatctcttataaataggac 15271173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 260 - 319
Target Start/End: Complemental strand, 31150709 - 31150650
Alignment:
Q  260 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtaaaa 319  Q
    |||||||| ||||||||||||| |||  ||||||||||||||||| ||||| ||||||||    
T  31150709 aaatacataaacttttgttgacgcaactttctcttataaataggatcggagagagtaaaa 31150650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 196 - 306
Target Start/End: Original strand, 23986788 - 23986898
Alignment:
Q  196 ggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctta 295  Q
    |||| |||||||||||||||||||  |||| |||||| ||||| | ||  |  |||||| |||||||||||| || |||||||||| ||||  | |||||    
T  23986788 ggtcatatttataagagaaatttaaatcaataaaagttaatgtttctgatccaaattttgaactaaatacataaagttttgttgactcaaatgtttctta 23986887  T
Q  296 taaataggacc 306  Q
    |||||| ||||    
T  23986888 taaataagacc 23986898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 192 - 317
Target Start/End: Original strand, 6648525 - 6648650
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  | || |||||||| ||| ||||    
T  6648525 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttct 6648624  T
Q  292 cttataaataggaccggagggagtaa 317  Q
    |||||||||||||||||||| |||||    
T  6648625 cttataaataggaccggaggtagtaa 6648650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 193 - 310
Target Start/End: Original strand, 16243790 - 16243907
Alignment:
Q  193 tccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctc 292  Q
    |||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| || ||    
T  16243790 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttc 16243889  T
Q  293 ttataaataggaccggag 310  Q
    ||||||||||||||||||    
T  16243890 ttataaataggaccggag 16243907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 23227346 - 23227391
Alignment:
Q  260 aaatacatcaacttttgttgacccaaaattctcttataaataggac 305  Q
    ||||||||||||||||||||||| |||  |||||||||||||||||    
T  23227346 aaatacatcaacttttgttgaccaaaatgtctcttataaataggac 23227391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 192 - 285
Target Start/End: Complemental strand, 30852741 - 30852648
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    |||||||||||||||||||||||| |||| | || ||||||  |||||| | |||||||| || ||  | |||||| ||||||||||| |||||    
T  30852741 ctccggtcctatttataagagaaagttagattaataaaagtttatgtatctagactgaatattgaatcagatacataaacttttgttgtcccaa 30852648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 4553125 - 4553069
Alignment:
Q  201 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaa 257  Q
    ||||||||||||||| || ||||||||||| |  ||||||||||| |||||||||||    
T  4553125 tatttataagagaaagtttggtcaacaaaaatagatgtatttggattgaatttttaa 4553069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 232
Target Start/End: Original strand, 9047761 - 9047801
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagt 232  Q
    ||||||||||||||||||||||| ||| |||||||||||||    
T  9047761 ctccggtcctatttataagagaattttgggtcaacaaaagt 9047801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 232
Target Start/End: Original strand, 12337943 - 12337983
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagt 232  Q
    ||||||||||||||||||||||| ||| |||||||||||||    
T  12337943 ctccggtcctatttataagagaattttgggtcaacaaaagt 12337983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 316
Target Start/End: Original strand, 38917528 - 38917652
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  |||||| |||||| ||| || |    
T  38917528 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttattgacctaaatttat 38917627  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||||||||||||| ||||    
T  38917628 cttataaataggaccggaggtagta 38917652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 319
Target Start/End: Original strand, 12170473 - 12170532
Alignment:
Q  260 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtaaaa 319  Q
    |||||||| ||||||| |||||| ||  ||||||| ||||||||| ||||||||||||||    
T  12170473 aaatacattaacttttattgacctaattttctcttgtaaataggatcggagggagtaaaa 12170532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 291 - 322
Target Start/End: Original strand, 30761502 - 30761533
Alignment:
Q  291 tcttataaataggaccggagggagtaaaatct 322  Q
    ||||||||||||||||||||||||||||||||    
T  30761502 tcttataaataggaccggagggagtaaaatct 30761533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 200 - 302
Target Start/End: Original strand, 36089457 - 36089559
Alignment:
Q  200 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaa 299  Q
    |||||||||||||| |||||||||||||||||| || |||| ||     || ||| ||||| |||||||||||||| || || ||||  |||||| ||||    
T  36089457 ctatttataagagatatttaggtcaacaaaagttaacgtatctgattcaaaatttaaactagatacatcaacttttattaactcaaatatctcttctaaa 36089556  T
Q  300 tag 302  Q
    |||    
T  36089557 tag 36089559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 191 - 316
Target Start/End: Original strand, 20900669 - 20900793
Alignment:
Q  191 tctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattc 290  Q
    |||| ||| |||||||||||||| |||| ||||| |||||||  |||||| | | |  |||||| ||| | |||| |||| ||||||||||| ||   ||    
T  20900669 tctctggttctatttataagagacatttgggtcagcaaaagttgatgtatcttgtccaaattttgaaccagatacgtcaatttttgttgacctaactatc 20900768  T
Q  291 tcttataaataggaccggagggagta 316  Q
    |||| ||||||||| |||||||||||    
T  20900769 tcttgtaaatagga-cggagggagta 20900793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 316
Target Start/End: Complemental strand, 13344528 - 13344484
Alignment:
Q  272 ttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    ||||||||||| ||| ||||||||||||||| |||||||| ||||    
T  13344528 ttttgttgacctaaatttctcttataaatagaaccggaggtagta 13344484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 192 - 232
Target Start/End: Complemental strand, 13344608 - 13344568
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagt 232  Q
    ||||||||||||||||||||||| ||| | |||||||||||    
T  13344608 ctccggtcctatttataagagaattttggatcaacaaaagt 13344568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 288 - 316
Target Start/End: Original strand, 13775832 - 13775860
Alignment:
Q  288 ttctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||    
T  13775832 ttctcttataaataggaccggagggagta 13775860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 192 - 232
Target Start/End: Original strand, 16044323 - 16044363
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagt 232  Q
    ||||||||||||||||||||||| ||| ||||||| |||||    
T  16044323 ctccggtcctatttataagagaattttgggtcaactaaagt 16044363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 20900718 - 20900678
Alignment:
Q  262 atacatcaacttttgttgacccaaaattctcttataaatag 302  Q
    ||||||||||||||| |||||||||  ||||||||||||||    
T  20900718 atacatcaacttttgctgacccaaatgtctcttataaatag 20900678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 192 - 232
Target Start/End: Original strand, 30099188 - 30099228
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagt 232  Q
    |||||||||||||||| |||||| ||| |||||||||||||    
T  30099188 ctccggtcctatttattagagaattttgggtcaacaaaagt 30099228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 288 - 316
Target Start/End: Original strand, 30852719 - 30852747
Alignment:
Q  288 ttctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||    
T  30852719 ttctcttataaataggaccggagggagta 30852747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 262 - 306
Target Start/End: Complemental strand, 36688936 - 36688892
Alignment:
Q  262 atacatcaacttttgttgacccaaaattctcttataaataggacc 306  Q
    |||||||||| |||||||||| ||  |||||||||||||||||||    
T  36688936 atacatcaacgtttgttgaccaaactttctcttataaataggacc 36688892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 192 - 232
Target Start/End: Original strand, 37666616 - 37666656
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagt 232  Q
    ||||||||||||||||||||||| ||| ||||||| |||||    
T  37666616 ctccggtcctatttataagagaattttgggtcaactaaagt 37666656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 260 - 316
Target Start/End: Original strand, 39724284 - 39724340
Alignment:
Q  260 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    |||| |||||||||||||||||||||   |||||||||  ||||||||| |||||||    
T  39724284 aaattcatcaacttttgttgacccaactgtctcttatatttaggaccggtgggagta 39724340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 260 - 316
Target Start/End: Original strand, 40714016 - 40714072
Alignment:
Q  260 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    ||||||||||||||||||||||| | || ||||||||||  |||||| |||| ||||    
T  40714016 aaatacatcaacttttgttgacctacaagtctcttataagaaggaccagaggcagta 40714072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 288 - 316
Target Start/End: Complemental strand, 42263497 - 42263469
Alignment:
Q  288 ttctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||    
T  42263497 ttctcttataaataggaccggagggagta 42263469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 192 - 232
Target Start/End: Original strand, 44804584 - 44804624
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagt 232  Q
    ||||||||||||||||||||||| |||| || |||||||||    
T  44804584 ctccggtcctatttataagagaattttaagttaacaaaagt 44804624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 123; Significance: 5e-63; HSPs: 61)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 186 - 316
Target Start/End: Original strand, 9395350 - 9395480
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9395350 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 9395449  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||||    
T  9395450 aattctcttataaataggaccggagggagta 9395480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 186 - 317
Target Start/End: Complemental strand, 37149085 - 37148954
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  37149085 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 37148986  T
Q  286 aattctcttataaataggaccggagggagtaa 317  Q
    |||||| |||||||||||||||||||||||||    
T  37148985 aattctattataaataggaccggagggagtaa 37148954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 186 - 320
Target Start/End: Original strand, 23359942 - 23360076
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  23359942 tactacctctggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 23360041  T
Q  286 aattctcttataaataggaccggagggagtaaaat 320  Q
    |||||||||||||||||||||||||| ||||||||    
T  23360042 aattctcttataaataggaccggaggtagtaaaat 23360076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 186 - 316
Target Start/End: Complemental strand, 36563668 - 36563538
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  36563668 tactacctccgatcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 36563569  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||||    
T  36563568 aattctcttataaataggaccggagggagta 36563538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 186 - 316
Target Start/End: Complemental strand, 41989537 - 41989407
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  41989537 tactacctccggtcctatttgtaagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 41989438  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||||    
T  41989437 aattctcttataaataggaccggagggagta 41989407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 192 - 316
Target Start/End: Original strand, 13103030 - 13103154
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  13103030 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgacccaaaattct 13103129  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||    
T  13103130 cttataaataggaccggagggagta 13103154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 186 - 316
Target Start/End: Original strand, 11795168 - 11795298
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  11795168 tactacctccgatcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 11795267  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||| ||||||||||    
T  11795268 aattctcttataaataggactggagggagta 11795298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 192 - 316
Target Start/End: Original strand, 13033057 - 13033181
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  13033057 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgacccaaaattct 13033156  T
Q  292 cttataaataggaccggagggagta 316  Q
    ||||||||||||| |||||||||||    
T  13033157 cttataaataggatcggagggagta 13033181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 186 - 316
Target Start/End: Original strand, 17025624 - 17025754
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||    
T  17025624 tactacctccggtcctatttataagagaaatttaggtccacaaaagtgaatgtatttaaactgaatttttaactagatacatcaacttttgttgacccaa 17025723  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||||    
T  17025724 aattctcttataaataggaccggagggagta 17025754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 186 - 317
Target Start/End: Original strand, 20848074 - 20848204
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||    
T  20848074 tactacctccggtcctatttataagagaaatttaggtcaataaaagtgaatgtatttggactgaatttttaactagatacatcaatttttgttg-cccaa 20848172  T
Q  286 aattctcttataaataggaccggagggagtaa 317  Q
    ||||||||||||||||||||||||||||||||    
T  20848173 aattctcttataaataggaccggagggagtaa 20848204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 186 - 316
Target Start/End: Original strand, 37641953 - 37642084
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaa-gtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgaccca 284  Q
    ||||| |||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||| |||||||||||||| ||||||||    
T  37641953 tactacctccggtcctatttataagagaaatttaggtcaataaaaagtgaatgtatgtggactgaatttttaactagatacatcaacttttattgaccca 37642052  T
Q  285 aaattctcttataaataggaccggagggagta 316  Q
    ||||||||||||||||||||||||||||||||    
T  37642053 aaattctcttataaataggaccggagggagta 37642084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 192 - 316
Target Start/End: Complemental strand, 26350474 - 26350350
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||  |||||||||    
T  26350474 ctccgatcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttattgattcaaaattct 26350375  T
Q  292 cttataaataggaccggagggagta 316  Q
     ||||||||||||||||||||||||    
T  26350374 tttataaataggaccggagggagta 26350350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 186 - 317
Target Start/End: Original strand, 582989 - 583119
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  582989 tactacctccggtcctatttataagagaaatttaggtcaacataagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 583088  T
Q  286 aattctcttataaataggaccggagggagtaa 317  Q
    |||||| ||||  |||||| ||||||||||||    
T  583089 aattcttttat-tataggatcggagggagtaa 583119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 195 - 318
Target Start/End: Original strand, 4443969 - 4444092
Alignment:
Q  195 cggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctt 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||| | |||||||||||    
T  4443969 cggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaaatagatacatcaacttttgttgatctaaaattctctt 4444068  T
Q  295 ataaataggaccggagggagtaaa 318  Q
    ||||||| ||||||||||| ||||    
T  4444069 ataaataagaccggagggaataaa 4444092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 210 - 316
Target Start/End: Original strand, 21575970 - 21576076
Alignment:
Q  210 gagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccgga 309  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  21575970 gagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaattagatacatcaacttttgttgatccaaaattctcttataaataggaccgga 21576069  T
Q  310 gggagta 316  Q
    |||||||    
T  21576070 gggagta 21576076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 207 - 316
Target Start/End: Original strand, 6126845 - 6126954
Alignment:
Q  207 taagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggacc 306  Q
    |||||||||||||| ||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  6126845 taagagaaatttagatcaacaaaaatgaatgtatttggactaaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 6126944  T
Q  307 ggagggagta 316  Q
    ||||||||||    
T  6126945 ggagggagta 6126954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 192 - 257
Target Start/End: Complemental strand, 38361815 - 38361750
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaa 257  Q
    ||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  38361815 ctccgatcctatttataagataaatttaggtcaataaaagtgaatgtatttggactgaatttttaa 38361750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 200 - 310
Target Start/End: Complemental strand, 3549663 - 3549553
Alignment:
Q  200 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaa 299  Q
    |||||||||||||| ||||  |||||||||| | ||||||| ||| || ||||||||||  |||||||||||||||||| |   ||| ||||||||||||    
T  3549663 ctatttataagagatattttagtcaacaaaaattaatgtatctggtctaaatttttaaccgaatacatcaacttttgttaatataaatttctcttataaa 3549564  T
Q  300 taggaccggag 310  Q
    |||||||||||    
T  3549563 taggaccggag 3549553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 210 - 302
Target Start/End: Complemental strand, 2366444 - 2366352
Alignment:
Q  210 gagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaatag 302  Q
    |||||| || ||| || ||||||  |||||||||||||||| ||||||| |||||||| |||| ||||||||||||| |||||||||||||||    
T  2366444 gagaaagtttggttaataaaagttgatgtatttggactgaaattttaaccaaatacatgaactcttgttgacccaaatttctcttataaatag 2366352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 193 - 274
Target Start/End: Complemental strand, 13539986 - 13539909
Alignment:
Q  193 tccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttt 274  Q
    |||||||||||||||||||||||||||||||||||||    |||  |||| ||||||||||||||||| |||||||||||||    
T  13539986 tccggtcctatttataagagaaatttaggtcaacaaa----aataaatttagactgaatttttaactagatacatcaacttt 13539909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 195 - 312
Target Start/End: Original strand, 966157 - 966274
Alignment:
Q  195 cggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctt 294  Q
    |||||||||||| |||||||| ||   ||||||| |||  |||||| | ||||||||||||||| | ||||||  | ||||||||| ||||| |||||||    
T  966157 cggtcctatttacaagagaaagttgaatcaacaacagttcatgtatcttgactgaatttttaaccagatacattcatttttgttgatccaaatttctctt 966256  T
Q  295 ataaataggaccggaggg 312  Q
    ||||||||||| ||||||    
T  966257 ataaataggactggaggg 966274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 192 - 317
Target Start/End: Complemental strand, 9395474 - 9395349
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  9395474 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 9395375  T
Q  292 cttataaataggaccggagggagtaa 317  Q
    |||||||||||||||||||| |||||    
T  9395374 cttataaataggaccggaggtagtaa 9395349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 192 - 299
Target Start/End: Complemental strand, 2629668 - 2629561
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    |||||||| | ||||||||| | |||||||||||||||||| ||||||| ||  || | |||||||||| ||||||||| |||| ||||| ||||  | |    
T  2629668 ctccggtcttgtttataagaaatatttaggtcaacaaaagttaatgtatctgatctaattttttaactatatacatcaaattttattgactcaaatgttt 2629569  T
Q  292 cttataaa 299  Q
    ||||||||    
T  2629568 cttataaa 2629561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 183 - 230
Target Start/End: Complemental strand, 11574213 - 11574166
Alignment:
Q  183 tactactatctccggtcctatttataagagaaatttaggtcaacaaaa 230  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  11574213 tactactctctccggtcctatttataagagacatttaggtcaacaaaa 11574166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 192 - 303
Target Start/End: Original strand, 39290781 - 39290891
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||| |||||||||  | |||||||||||| |  ||||||||||| | ||||||||| || |||||| ||||||||||||  | |  ||||    
T  39290781 ctccggtcctatt-ataagagaatatcaggtcaacaaaaattgatgtatttggattaaatttttaattagatacattaacttttgttgattcgactttct 39290879  T
Q  292 cttataaatagg 303  Q
    ||||||||||||    
T  39290880 cttataaatagg 39290891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 186 - 316
Target Start/End: Complemental strand, 23360072 - 23359942
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||    
T  23360072 tactacctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 23359973  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    | ||||||||||||||||||| |||| ||||    
T  23359972 atttctcttataaataggaccagaggtagta 23359942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 235 - 316
Target Start/End: Original strand, 35904448 - 35904527
Alignment:
Q  235 atgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||  ||  |||||| ||||||| ||||| || |||||    
T  35904448 atgtatttggactgaatttttaactaaatacat--acttttgttgactaaattttctctaataaataagaccgaagagagta 35904527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 201 - 308
Target Start/End: Complemental strand, 36595886 - 36595782
Alignment:
Q  201 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaat 300  Q
    ||||||||||||||  || | |||||||||   ||||||| | ||||||||||||||  | ||||||||| ||||||||||| ||  |||||||||||||    
T  36595886 tatttataagagaatatttgatcaacaaaa---aatgtatctagactgaatttttaatcagatacatcaatttttgttgacctaactttctcttataaat 36595790  T
Q  301 aggaccgg 308  Q
    | ||||||    
T  36595789 aagaccgg 36595782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 249 - 313
Target Start/End: Complemental strand, 9006949 - 9006885
Alignment:
Q  249 aatttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 313  Q
    |||||| ||||| ||||||||||||||||||||| |||| ||| |||||||||||| | ||||||    
T  9006949 aattttgaactagatacatcaacttttgttgacctaaaagtctgttataaataggagcagaggga 9006885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 316
Target Start/End: Complemental strand, 13033107 - 13033051
Alignment:
Q  260 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  13033107 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggaagta 13033051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 316
Target Start/End: Complemental strand, 13103148 - 13103024
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| |      || ||    | ||||||||  ||||||||||||| ||| ||||    
T  13103148 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 13103049  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||||||||||||| ||||    
T  13103048 cttataaataggaccggaggaagta 13103024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 316
Target Start/End: Complemental strand, 17025748 - 17025624
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||     |||||||||  |||||||| |||| ||| ||||    
T  17025748 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtttaaatacattcacttttgtggacctaaatttct 17025649  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||||||||||||| ||||    
T  17025648 cttataaataggaccggaggtagta 17025624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 316
Target Start/End: Original strand, 26350424 - 26350480
Alignment:
Q  260 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    ||||||||  ||||||||||||| ||| ||||||||||||||||| |||||||||||    
T  26350424 aaatacattcacttttgttgacctaaatttctcttataaataggatcggagggagta 26350480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 316
Target Start/End: Original strand, 36563544 - 36563668
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  36563544 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 36563643  T
Q  292 cttataaataggaccggagggagta 316  Q
    ||||||||||||| |||||| ||||    
T  36563644 cttataaataggatcggaggtagta 36563668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 316
Target Start/End: Original strand, 37149029 - 37149085
Alignment:
Q  260 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  37149029 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 37149085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 201 - 300
Target Start/End: Complemental strand, 40138906 - 40138806
Alignment:
Q  201 tatttataagagaaatttag-gtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaa 299  Q
    |||||||||||||||  | | |||||||||| | ||| |||||| |||||||||||||  |||||||||||||||| || ||||||  |||| |||||||    
T  40138906 tatttataagagaaaagttgagtcaacaaaaataaatatatttgaactgaatttttaatcaaatacatcaacttttattaacccaattttcttttataaa 40138807  T
Q  300 t 300  Q
    |    
T  40138806 t 40138806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 316
Target Start/End: Original strand, 41989413 - 41989537
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  41989413 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 41989512  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||| ||||||||||||||| ||||    
T  41989513 cttacaaataggaccggaggtagta 41989537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 192 - 319
Target Start/End: Complemental strand, 11795292 - 11795165
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    |||| |||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  11795292 ctccagtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 11795193  T
Q  292 cttataaataggaccggagggagtaaaa 319  Q
    ||||||||||||| |||||| |||||||    
T  11795192 cttataaataggatcggaggtagtaaaa 11795165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 316
Target Start/End: Complemental strand, 4444018 - 4443960
Alignment:
Q  258 ctaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    ||||||||||  ||||||||||||| ||| |||||||||||||||||||| ||| ||||    
T  4444018 ctaaatacattcacttttgttgacctaaatttctcttataaataggaccgaaggaagta 4443960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 201 - 302
Target Start/End: Original strand, 18167334 - 18167435
Alignment:
Q  201 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaat 300  Q
    |||| |||||||||| |||| ||||||||| |  |||||| |||| | |||||||||  |||||| |||| ||||||||||| ||  || ||||||||||    
T  18167334 tattaataagagaaagttagatcaacaaaaattgatgtatatggatttaatttttaatcaaatacgtcaatttttgttgaccaaactttttcttataaat 18167433  T
Q  301 ag 302  Q
    ||    
T  18167434 ag 18167435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 221 - 282
Target Start/End: Complemental strand, 39030648 - 39030587
Alignment:
Q  221 gtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacc 282  Q
    |||||||||||| |||||||||||    |||||||||| |||||||| ||||||||||||||    
T  39030648 gtcaacaaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacc 39030587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 260 - 317
Target Start/End: Complemental strand, 39290830 - 39290774
Alignment:
Q  260 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtaa 317  Q
    ||||||||||| |||||||||||  | |||||||||| ||||||||||||||||||||    
T  39290830 aaatacatcaatttttgttgacctgatattctcttat-aataggaccggagggagtaa 39290774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 316
Target Start/End: Complemental strand, 583045 - 582989
Alignment:
Q  260 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    ||||||||  |||| |||||||| ||| |||||||||||||||||||||||| ||||    
T  583045 aaatacattcacttatgttgacctaaatttctcttataaataggaccggaggtagta 582989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 240
Target Start/End: Complemental strand, 966272 - 966224
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtat 240  Q
    |||| |||||||||||||||||||||| | ||||||||| |||||||||    
T  966272 ctccagtcctatttataagagaaatttggatcaacaaaaatgaatgtat 966224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 232
Target Start/End: Complemental strand, 6126948 - 6126908
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagt 232  Q
    ||||||||||||||||||||||| ||| |||||||||||||    
T  6126948 ctccggtcctatttataagagaattttgggtcaacaaaagt 6126908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 316
Target Start/End: Complemental strand, 20848130 - 20848074
Alignment:
Q  260 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    ||||||||  |||||| |||||| ||| |||||||||||||||||||||||| ||||    
T  20848130 aaatacattcacttttattgacctaaatttctcttataaataggaccggaggtagta 20848074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 184 - 275
Target Start/End: Complemental strand, 27081072 - 27080981
Alignment:
Q  184 actactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaactttt 275  Q
    |||||| | |||| ||||||||| |||||| ||||||||||||||||||  ||||||||   || |||||||||  ||||| |||| |||||    
T  27081072 actactctttccgatcctatttacaagagacatttaggtcaacaaaagttgatgtatttaatctaaatttttaatcaaataaatcatctttt 27080981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 286 - 317
Target Start/End: Complemental strand, 38361743 - 38361712
Alignment:
Q  286 aattctcttataaataggaccggagggagtaa 317  Q
    ||||||||||||||||||||||||||||||||    
T  38361743 aattctcttataaataggaccggagggagtaa 38361712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 191 - 241
Target Start/End: Original strand, 3549552 - 3549602
Alignment:
Q  191 tctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatt 241  Q
    |||||||||||||||||||||||||||||  | |||||||||  |||||||    
T  3549552 tctccggtcctatttataagagaaatttatattaacaaaagttgatgtatt 3549602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 259 - 309
Target Start/End: Original strand, 27081013 - 27081063
Alignment:
Q  259 taaatacatcaacttttgttgacccaaaattctcttataaataggaccgga 309  Q
    |||||||||||||||||||||||| |||  |||||| ||||||||| ||||    
T  27081013 taaatacatcaacttttgttgacctaaatgtctcttgtaaataggatcgga 27081063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 316
Target Start/End: Original strand, 11574161 - 11574210
Alignment:
Q  267 tcaacttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    |||| ||||||||||| |||  |||||||||||||||||||||| |||||    
T  11574161 tcaatttttgttgacctaaatgtctcttataaataggaccggagagagta 11574210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 309
Target Start/End: Original strand, 13539949 - 13539986
Alignment:
Q  272 ttttgttgacccaaaattctcttataaataggaccgga 309  Q
    ||||||||||| ||| ||||||||||||||||||||||    
T  13539949 ttttgttgacctaaatttctcttataaataggaccgga 13539986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 200 - 244
Target Start/End: Original strand, 2366352 - 2366396
Alignment:
Q  200 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttgg 244  Q
    ||||||||||||||||||| ||||||||| |||  ||||||||||    
T  2366352 ctatttataagagaaatttgggtcaacaagagttcatgtatttgg 2366396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 192 - 240
Target Start/End: Complemental strand, 4444084 - 4444036
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtat 240  Q
    |||||||| |||||||||||||| ||||| |||||||||||  ||||||    
T  4444084 ctccggtcttatttataagagaattttagatcaacaaaagttgatgtat 4444036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 319
Target Start/End: Complemental strand, 11931993 - 11931965
Alignment:
Q  291 tcttataaataggaccggagggagtaaaa 319  Q
    |||||||||||||||||||||||||||||    
T  11931993 tcttataaataggaccggagggagtaaaa 11931965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 192 - 240
Target Start/End: Complemental strand, 13033175 - 13033127
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtat 240  Q
    ||||| ||||||||||||||||| ||| |||||||||||||  ||||||    
T  13033175 ctccgatcctatttataagagaattttgggtcaacaaaagttgatgtat 13033127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 192 - 232
Target Start/End: Complemental strand, 21576070 - 21576030
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagt 232  Q
    ||||||||||||||||||||||| ||| | |||||||||||    
T  21576070 ctccggtcctatttataagagaattttggatcaacaaaagt 21576030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 194 - 230
Target Start/End: Original strand, 36595782 - 36595818
Alignment:
Q  194 ccggtcctatttataagagaaatttaggtcaacaaaa 230  Q
    |||||| ||||||||||||||| ||||||||||||||    
T  36595782 ccggtcttatttataagagaaagttaggtcaacaaaa 36595818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 192 - 232
Target Start/End: Original strand, 37148961 - 37149001
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagt 232  Q
    |||||||||||||||||| |||| ||| |||||||||||||    
T  37148961 ctccggtcctatttataatagaattttgggtcaacaaaagt 37149001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 316
Target Start/End: Complemental strand, 37641997 - 37641953
Alignment:
Q  272 ttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    |||| |||||| ||| |||||||||||||||||||||||| ||||    
T  37641997 ttttattgacctaaatttctcttataaataggaccggaggtagta 37641953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 192 - 232
Target Start/End: Complemental strand, 37642078 - 37642038
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagt 232  Q
    ||||||||||||||||||||||| ||| |||||| ||||||    
T  37642078 ctccggtcctatttataagagaattttgggtcaataaaagt 37642038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 123; Significance: 5e-63; HSPs: 80)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 186 - 316
Target Start/End: Original strand, 47833611 - 47833741
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  47833611 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 47833710  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||||    
T  47833711 aattctcttataaataggaccggagggagta 47833741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 186 - 317
Target Start/End: Complemental strand, 20538816 - 20538685
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  20538816 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaaattttgttgacccaa 20538717  T
Q  286 aattctcttataaataggaccggagggagtaa 317  Q
    ||||||||||||||||||||||||||||||||    
T  20538716 aattctcttataaataggaccggagggagtaa 20538685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 181 - 316
Target Start/End: Original strand, 48336258 - 48336393
Alignment:
Q  181 tatactactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttga 280  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  48336258 tataatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttga 48336357  T
Q  281 cccaaaattctcttataaataggaccggagggagta 316  Q
    ||||||||| ||||||||||||||||||||||||||    
T  48336358 cccaaaattttcttataaataggaccggagggagta 48336393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 186 - 316
Target Start/End: Original strand, 3372121 - 3372251
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  3372121 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 3372220  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||| ||||||||||||||||||||||||||    
T  3372221 aattatcttataaataggaccggagggagta 3372251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 186 - 316
Target Start/End: Complemental strand, 3904813 - 3904683
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  3904813 tactacctccggtcctatttataaaagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaatttttgttgacccaa 3904714  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||||    
T  3904713 aattctcttataaataggaccggagggagta 3904683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 186 - 316
Target Start/End: Complemental strand, 6122023 - 6121893
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  6122023 tactacctccggtcctatttataagagaaatttagatcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 6121924  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||||    
T  6121923 aattctcttataaataggaccggagggagta 6121893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 186 - 316
Target Start/End: Original strand, 53337370 - 53337500
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  53337370 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttattgacccaa 53337469  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||||    
T  53337470 aattctcttataaataggaccggagggagta 53337500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 180 - 316
Target Start/End: Original strand, 46797719 - 46797855
Alignment:
Q  180 gtatactactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttg 279  Q
    |||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  46797719 gtatcctactacctccggttctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatatatcaacttttgttg 46797818  T
Q  280 acccaaaattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||||||||||    
T  46797819 acccaaaattctcttataaataggaccggagggagta 46797855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 186 - 317
Target Start/End: Original strand, 42797732 - 42797863
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  42797732 tactacctccggtcctatatataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacctaa 42797831  T
Q  286 aattctcttataaataggaccggagggagtaa 317  Q
    ||||||||||||||||||||||||||||||||    
T  42797832 aattctcttataaataggaccggagggagtaa 42797863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 186 - 316
Target Start/End: Original strand, 3992976 - 3993106
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  3992976 tactacctccggtcctatttataagagaaatttcggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 3993075  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||| ||||||||||||||    
T  3993076 aattctcttataaataagaccggagggagta 3993106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 186 - 316
Target Start/End: Original strand, 24704370 - 24704500
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  24704370 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacattaacttttgttgacccaa 24704469  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    ||||||||||||||||||| |||||||||||    
T  24704470 aattctcttataaataggatcggagggagta 24704500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 186 - 316
Target Start/End: Original strand, 52756675 - 52756805
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  52756675 tactatctccggtcctatttataagagaaatttaggtcaacataagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 52756774  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||| ||||||||||||||| ||||||||    
T  52756775 aattcttttataaataggaccgaagggagta 52756805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 192 - 320
Target Start/End: Original strand, 43900555 - 43900683
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  43900555 ctccggtcctatttataagagaaatttaggtcaacaaaagtaaatgtatttggactgaatttttaactagatacatcaacttttgttaacccaaaattct 43900654  T
Q  292 cttataaataggaccggagggagtaaaat 320  Q
    |||||||||||||||||||| ||||||||    
T  43900655 cttataaataggaccggaggaagtaaaat 43900683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 181 - 317
Target Start/End: Complemental strand, 51894717 - 51894581
Alignment:
Q  181 tatactactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttga 280  Q
    |||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||    
T  51894717 tataatactacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaatgtttttggactgaatttttaaccagatacatcaacttttgttga 51894618  T
Q  281 cccaaaattctcttataaataggaccggagggagtaa 317  Q
    |||||||||||||||||||||||||||||||||||||    
T  51894617 cccaaaattctcttataaataggaccggagggagtaa 51894581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 181 - 316
Target Start/End: Original strand, 5986871 - 5987006
Alignment:
Q  181 tatactactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttga 280  Q
    |||| ||||| ||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5986871 tatattactacctccgattctatttataagagaaatataggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttga 5986970  T
Q  281 cccaaaattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||| |||||    
T  5986971 cccaaaattctcttataaataggaccggagagagta 5987006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 186 - 316
Target Start/End: Complemental strand, 47838747 - 47838617
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  47838747 tactacctccgatcctatttataagagaaatttcggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccaaa 47838648  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||||    
T  47838647 aattctcttataaataggaccggagggagta 47838617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 195 - 316
Target Start/End: Original strand, 33621805 - 33621926
Alignment:
Q  195 cggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctt 294  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  33621805 cggttctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattatctt 33621904  T
Q  295 ataaataggaccggagggagta 316  Q
    ||||||||||||||||||||||    
T  33621905 ataaataggaccggagggagta 33621926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 186 - 316
Target Start/End: Original strand, 7579310 - 7579440
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  7579310 tactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgacccaa 7579409  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    ||||||||||||||||| |||||||| ||||    
T  7579410 aattctcttataaatagaaccggaggaagta 7579440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 195 - 316
Target Start/End: Complemental strand, 41469887 - 41469766
Alignment:
Q  195 cggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctt 294  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||    
T  41469887 cggtcctatttataaaagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgaccaaaaattctctt 41469788  T
Q  295 ataaataggaccggagggagta 316  Q
    ||||||||||||||||||||||    
T  41469787 ataaataggaccggagggagta 41469766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 198 - 316
Target Start/End: Original strand, 3422073 - 3422190
Alignment:
Q  198 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttata 297  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  3422073 tcctatttataagagaaatttaggtcaacaaaa-tgaatgtatttgaactgaatttttaactagatacatcaacttttgttgacccaaaattctcttata 3422171  T
Q  298 aataggaccggagggagta 316  Q
    |||||||||||||||||||    
T  3422172 aataggaccggagggagta 3422190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 192 - 315
Target Start/End: Complemental strand, 40913313 - 40913190
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||| ||||| ||||    
T  40913313 ctccggtcctatttataagagaaatttagatcaacaaaagtgaatgtatttggactgaatttttaactggatatatcaacttttgttgatccaaatttct 40913214  T
Q  292 cttataaataggaccggagggagt 315  Q
    ||||||||||||||||||||||||    
T  40913213 cttataaataggaccggagggagt 40913190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 186 - 297
Target Start/End: Original strand, 33551201 - 33551312
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||  ||||||    
T  33551201 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtattttgactgaatttttaactagatacatcaacttttgtaaacccaa 33551300  T
Q  286 aattctcttata 297  Q
    ||||||||||||    
T  33551301 aattctcttata 33551312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 198 - 316
Target Start/End: Complemental strand, 41615794 - 41615676
Alignment:
Q  198 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttata 297  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||  ||||||||||    
T  41615794 tcctatttataagagaaaattaggtcaacaaaagttaatgtatttggacttaatttttaactaaatacatcaacttttgttgatccaattttctcttata 41615695  T
Q  298 aataggaccggagggagta 316  Q
    |||||||||||| ||||||    
T  41615694 aataggaccggatggagta 41615676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 34537157 - 34537258
Alignment:
Q  20 ctatcatgtgtaaaaacaattttgatttattattgttatattttttgaagcattagaggccattt-aatagtttgttattggacttttcaagtgtcgctt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||    
T  34537157 ctatcatgtgtaaaaacaattttgatttattattgttatattttttgaagcattagaggtcatttcaatagcttgttattggacttttcaagtgtcgctt 34537256  T
Q  119 at 120  Q
    ||    
T  34537257 at 34537258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 186 - 297
Target Start/End: Original strand, 26231577 - 26231688
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||  ||| ||    
T  26231577 tactacctccggtcctatttataagagaaatttaggtcaacaaaagcgaatgtatttggactgaatttttaactagatatatcaacttttgtaaaccgaa 26231676  T
Q  286 aattctcttata 297  Q
    ||||||||||||    
T  26231677 aattctcttata 26231688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 197 - 317
Target Start/End: Original strand, 29845656 - 29845770
Alignment:
Q  197 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatc-aacttttgttgacccaaaattctctta 295  Q
    |||||| ||||||||||||||||||||||||||| | ||| |||||| ||||||||||||||| |||||||| |||||||||||| ||      ||||||    
T  29845656 gtcctacttataagagaaatttaggtcaacaaaaattaatatatttgaactgaatttttaact-aatacatcaaacttttgttgatcc------ctctta 29845748  T
Q  296 taaataggaccggagggagtaa 317  Q
    ||||||||||||||||||||||    
T  29845749 taaataggaccggagggagtaa 29845770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 196 - 285
Target Start/End: Original strand, 25855093 - 25855182
Alignment:
Q  196 ggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    |||||||||||| ||||||| ||  |||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||| |||||||    
T  25855093 ggtcctatttatgagagaaagttgagtcaacaaaagttaatgtatttggactgaatttttaaccaaatacatcgacttttgtagacccaa 25855182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 192 - 316
Target Start/End: Original strand, 17344219 - 17344343
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||| |||||||||||||||| |||  |||||||||||  |||||| || |||||||||||||    ||||||||||||||||||| ||||| ||||    
T  17344219 ctccggttctatttataagagaaagttaaatcaacaaaagttgatgtatctgaactgaatttttaatcggatacatcaacttttgttgatccaaatttct 17344318  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||| ||  ||||||||||    
T  17344319 cttataaataagattggagggagta 17344343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 201 - 303
Target Start/End: Complemental strand, 50430533 - 50430431
Alignment:
Q  201 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaat 300  Q
    |||||||||||| || || |||||||||||||  ||||||||||| |||||||||||| | ||||||||| |||||||||||||||  | ||||||||||    
T  50430533 tatttataagagcaagttgggtcaacaaaagttgatgtatttggattgaatttttaaccagatacatcaatttttgttgacccaaatatatcttataaat 50430434  T
Q  301 agg 303  Q
    |||    
T  50430433 agg 50430431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 192 - 316
Target Start/End: Original strand, 4780302 - 4780425
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    |||||||| ||||||||||||| |||||  |||  ||||||| ||||||  |  |  |||||||||  | |||||| |||||||||||||| ||| ||||    
T  4780302 ctccggtcttatttataagagacatttacatcagtaaaagtggatgtatccgatcc-aatttttaatcagatacattaacttttgttgaccaaaatttct 4780400  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||    
T  4780401 cttataaataggaccggagggagta 4780425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 260 - 316
Target Start/End: Original strand, 17236862 - 17236918
Alignment:
Q  260 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||| |||||    
T  17236862 aaatacatcaacttttgttgacccaaatttttcttataaataggaccggagagagta 17236918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 186 - 264
Target Start/End: Complemental strand, 17236918 - 17236839
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgta-tttggactgaatttttaactaaata 264  Q
    |||| ||||||||||||||||||||| |||||| |||||||||||||  ||||| ||| ||||||||||||||| |||||    
T  17236918 tactctctccggtcctatttataagaaaaatttgggtcaacaaaagttgatgtattttagactgaatttttaaccaaata 17236839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 182 - 240
Target Start/End: Complemental strand, 4780429 - 4780371
Alignment:
Q  182 atactactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtat 240  Q
    ||||||||  ||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  4780429 atactactccctccggtcctatttataagagaaattttggtcaacaaaagttaatgtat 4780371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 192 - 317
Target Start/End: Complemental strand, 24704494 - 24704369
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||| ||||||||||||||||| ||| ||||||||||||| ||||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  24704494 ctccgatcctatttataagagaattttgggtcaacaaaagttaatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 24704395  T
Q  292 cttataaataggaccggagggagtaa 317  Q
    |||||||||||||||||||| |||||    
T  24704394 cttataaataggaccggaggtagtaa 24704369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 192 - 316
Target Start/End: Complemental strand, 42797856 - 42797732
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| |||||||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  42797856 ctccggtcctatttataagagaattttaggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 42797757  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||| ||||||||||||| ||||    
T  42797756 cttatatataggaccggaggtagta 42797732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 192 - 316
Target Start/End: Complemental strand, 43900673 - 43900549
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| ||| |||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  43900673 ctccggtcctatttataagagaattttgggttaacaaaagttgatgtatctagttaaaaattcagtccaaatacatttacttttgttgacctaaatttct 43900574  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||    
T  43900573 cttataaataggaccggagggagta 43900549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 192 - 316
Target Start/End: Complemental strand, 47833735 - 47833611
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  47833735 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 47833636  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||||||||||||| ||||    
T  47833635 cttataaataggaccggaggtagta 47833611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 183 - 297
Target Start/End: Original strand, 41594651 - 41594765
Alignment:
Q  183 tactactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacc 282  Q
    ||||||| |||||||||| |  ||||||||||| || |||||||||||||  |||||| ||| |  |||||| ||| | ||||||||||||  |||||||    
T  41594651 tactactctctccggtcccacatataagagaaagttgggtcaacaaaagttgatgtatatggtccaaattttgaaccagatacatcaacttaagttgacc 41594750  T
Q  283 caaaattctcttata 297  Q
    |||  ||||||||||    
T  41594751 caactttctcttata 41594765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 201 - 307
Target Start/End: Complemental strand, 43095336 - 43095230
Alignment:
Q  201 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaat 300  Q
    ||||||||||||| ||||| |||||||||| | ||||||| ||| |  |||||| ||| | |||||| || |||||||| ||||||  ||||||||||||    
T  43095336 tatttataagagatatttaagtcaacaaaaattaatgtatctggtccaaattttgaaccatatacattaatttttgttggcccaaacgtctcttataaat 43095237  T
Q  301 aggaccg 307  Q
    | |||||    
T  43095236 aagaccg 43095230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 192 - 314
Target Start/End: Original strand, 44900086 - 44900208
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    |||||||||||||||||||||| |||  |||||||||||||  || ||| ||| |  | | |||||| | |||| |||||||||||||||||| |   ||    
T  44900086 ctccggtcctatttataagagatattctggtcaacaaaagttgatatatctggtccaattgtttaaccagatacgtcaacttttgttgacccagacgact 44900185  T
Q  292 cttataaataggaccggagggag 314  Q
    ||  |||||||||||||||||||    
T  44900186 ctcgtaaataggaccggagggag 44900208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 245 - 311
Target Start/End: Original strand, 45478151 - 45478217
Alignment:
Q  245 actgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagg 311  Q
    ||||||||||||||   |||||||||||||| |||||||| | ||||||||||||||||| ||||||    
T  45478151 actgaatttttaaccggatacatcaacttttattgacccacatttctcttataaataggatcggagg 45478217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 192 - 318
Target Start/End: Complemental strand, 53337494 - 53337368
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| |||||| ||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  53337494 ctccggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 53337395  T
Q  292 cttataaataggaccggagggagtaaa 318  Q
    |||||||||||||||||||| ||||||    
T  53337394 cttataaataggaccggaggtagtaaa 53337368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 183 - 316
Target Start/End: Complemental strand, 3372254 - 3372121
Alignment:
Q  183 tactactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacc 282  Q
    |||||||  |||||||||||||||||||| || ||| |||||||||||||  |||||| | |    || ||    | ||||||||  |||||||||||||    
T  3372254 tactactccctccggtcctatttataagataattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacc 3372155  T
Q  283 caaaattctcttataaataggaccggagggagta 316  Q
     ||| |||||||||||||||||||||||| ||||    
T  3372154 taaatttctcttataaataggaccggaggtagta 3372121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 192 - 317
Target Start/End: Original strand, 6121899 - 6122024
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||| | ||| ||||    
T  6121899 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttct 6121998  T
Q  292 cttataaataggaccggagggagtaa 317  Q
    |||||||||||||||||||| |||||    
T  6121999 cttataaataggaccggaggtagtaa 6122024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 183 - 316
Target Start/End: Complemental strand, 7579443 - 7579310
Alignment:
Q  183 tactactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacc 282  Q
    |||||||  ||||||| ||||||||||||||| ||| |||||||||||||  |||||| | |    || ||  | | ||||||||  ||||||||| |||    
T  7579443 tactacttcctccggttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttaacc 7579344  T
Q  283 caaaattctcttataaataggaccggagggagta 316  Q
     ||| |||||||||||||||||||||||| ||||    
T  7579343 taaatttctcttataaataggaccggaggtagta 7579310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 201 - 282
Target Start/End: Original strand, 31013036 - 31013117
Alignment:
Q  201 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacc 282  Q
    ||||||||| ||| |||||| |||||||||||  ||||||||||  | |||| ||||||| |||||||| ||||||||||||    
T  31013036 tatttataaaagacatttagatcaacaaaagtagatgtatttggtttaaattcttaactagatacatcatcttttgttgacc 31013117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 316
Target Start/End: Original strand, 3904689 - 3904813
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| ||||||||||| |  |||||||| |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  3904689 ctccggtcctatttataagagaattttgggtcaacaaaaattgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 3904788  T
Q  292 cttataaataggaccggagggagta 316  Q
     ||||||||||||||||||| ||||    
T  3904789 tttataaataggaccggaggtagta 3904813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 316
Target Start/End: Complemental strand, 3993100 - 3992976
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    |||||||| |||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  3993100 ctccggtcttatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccgaaatttct 3993001  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||||||||||||| ||||    
T  3993000 cttataaataggaccggaggtagta 3992976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 186 - 242
Target Start/End: Complemental strand, 5987006 - 5986950
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtattt 242  Q
    |||| |||||||||||||||||||||||| ||| |||||||||||||  ||||||||    
T  5987006 tactctctccggtcctatttataagagaattttgggtcaacaaaagttgatgtattt 5986950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 316
Target Start/End: Original strand, 20538760 - 20538816
Alignment:
Q  260 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  20538760 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 20538816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 316
Target Start/End: Complemental strand, 33551257 - 33551201
Alignment:
Q  260 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  33551257 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 33551201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 316
Target Start/End: Original strand, 40913263 - 40913319
Alignment:
Q  260 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    ||||||||  ||||||||||| | ||| |||||||||||||||||||||||||||||    
T  40913263 aaatacattcacttttgttgatctaaatttctcttataaataggaccggagggagta 40913319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 235 - 307
Target Start/End: Original strand, 45725905 - 45725977
Alignment:
Q  235 atgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccg 307  Q
    |||||||| |||| |||| |||||||||||| | |||||||||||||  ||  ||||||||||||||||||||    
T  45725905 atgtatttagactaaattcttaactaaatacgttaacttttgttgacgaaactttctcttataaataggaccg 45725977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 316
Target Start/End: Original strand, 47838623 - 47838747
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  47838623 ctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccgaaatttct 47838722  T
Q  292 cttataaataggaccggagggagta 316  Q
    ||||||||||||| |||||| ||||    
T  47838723 cttataaataggatcggaggtagta 47838747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 316
Target Start/End: Complemental strand, 48336387 - 48336263
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    |||||||||||||||||||| || ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  48336387 ctccggtcctatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 48336288  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||||||||||||| ||||    
T  48336287 cttataaataggaccggaggtagta 48336263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 316
Target Start/End: Original strand, 51894588 - 51894712
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| |||    || ||    | ||| ||||  ||||||||||||| ||| || |    
T  51894588 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctggttaaaaattcagtccaaaaacattcacttttgttgacctaaattttt 51894687  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||||||||||||| ||||    
T  51894688 cttataaataggaccggaggtagta 51894712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 200 - 286
Target Start/End: Original strand, 9876653 - 9876739
Alignment:
Q  200 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaa-tttttaactaaatacatcaacttttgttgacccaaa 286  Q
    |||||||||||||||||||| || ||||||| | ||||||| | |||| || |||||||| |||||||| || |||||||||||||||    
T  9876653 ctatttataagagaaatttacgttaacaaaatttaatgtatct-gactcaattttttaaccaaatacataaatttttgttgacccaaa 9876739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 262 - 316
Target Start/End: Complemental strand, 1716355 - 1716301
Alignment:
Q  262 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    ||||||||||||||||||||| ||   ||||||||||||| ||||||||||||||    
T  1716355 atacatcaacttttgttgaccaaattatctcttataaataagaccggagggagta 1716301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 266 - 316
Target Start/End: Complemental strand, 44900130 - 44900080
Alignment:
Q  266 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||  ||  ||||||||||||||||||||||||||||    
T  44900130 atcaacttttgttgaccagaatatctcttataaataggaccggagggagta 44900080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 192 - 304
Target Start/End: Original strand, 1716307 - 1716417
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    |||||||| ||||||||||||| | || |||||||||||||  |||||| ||  |  |  ||||||| | || |||||||||| ||||||| ||| ||||    
T  1716307 ctccggtcttatttataagagataatttggtcaacaaaagttgatgtatctgatccaa--ttttaaccagatgcatcaactttggttgacctaaacttct 1716404  T
Q  292 cttataaatagga 304  Q
    |||||||||||||    
T  1716405 cttataaatagga 1716417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 271 - 316
Target Start/End: Complemental strand, 26231622 - 26231577
Alignment:
Q  271 cttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    |||||||||||| ||| |||||||||||||||||||||||| ||||    
T  26231622 cttttgttgacctaaatttctcttataaataggaccggaggtagta 26231577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 232
Target Start/End: Complemental strand, 3422184 - 3422144
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagt 232  Q
    ||||||||||||||||||||||| ||| |||||||||||||    
T  3422184 ctccggtcctatttataagagaattttgggtcaacaaaagt 3422144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 316
Target Start/End: Complemental strand, 25855139 - 25855083
Alignment:
Q  260 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    |||||||| ||||||||||||| |||  |||||| |||||||||||| |||||||||    
T  25855139 aaatacattaacttttgttgactcaactttctctcataaataggacctgagggagta 25855083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 232
Target Start/End: Original strand, 40913195 - 40913235
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagt 232  Q
    ||||||||||||||||||||||||||| | |||||||||||    
T  40913195 ctccggtcctatttataagagaaatttggatcaacaaaagt 40913235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 232
Target Start/End: Original strand, 41469772 - 41469812
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagt 232  Q
    ||||||||||||||||||||||| ||| |||||||||||||    
T  41469772 ctccggtcctatttataagagaatttttggtcaacaaaagt 41469812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 316
Target Start/End: Complemental strand, 46797781 - 46797725
Alignment:
Q  260 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    ||||||||  ||||||||||||| ||| ||||||||||||||| |||||||| ||||    
T  46797781 aaatacattcacttttgttgacctaaatttctcttataaatagaaccggaggtagta 46797725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 232
Target Start/End: Complemental strand, 46797849 - 46797809
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagt 232  Q
    ||||||||||||||||||||||| ||| |||||||||||||    
T  46797849 ctccggtcctatttataagagaattttgggtcaacaaaagt 46797809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 197 - 276
Target Start/End: Complemental strand, 6924802 - 6924724
Alignment:
Q  197 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttg 276  Q
    ||||||| ||||||| ||| |||||||||||||||| ||||||||||| || |||||| ||  | || ||||||||||||    
T  6924802 gtcctatatataaga-aaagttaggtcaacaaaagttaatgtatttggtctaaattttgaatcagatgcatcaacttttg 6924724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 304
Target Start/End: Original strand, 41615683 - 41615794
Alignment:
Q  193 tccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctc 292  Q
    ||||||||||||||||||||||| || | |||||||||||  |||||||| |    || ||    | |||||||| |||||||||||||| ||  |||||    
T  41615683 tccggtcctatttataagagaaaattggatcaacaaaagttgatgtatttagttaaaaattaagtccaaatacattaacttttgttgacctaattttctc 41615782  T
Q  293 ttataaatagga 304  Q
    ||||||||||||    
T  41615783 ttataaatagga 41615794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 192 - 230
Target Start/End: Original strand, 20538692 - 20538730
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaa 230  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  20538692 ctccggtcctatttataagagaattttgggtcaacaaaa 20538730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 262 - 316
Target Start/End: Complemental strand, 41594708 - 41594654
Alignment:
Q  262 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    ||||||||||||||||||||||||  ||||||||||  | ||||||||| |||||    
T  41594708 atacatcaacttttgttgacccaactttctcttatatgtgggaccggagagagta 41594654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 52756731 - 52756681
Alignment:
Q  260 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggag 310  Q
    ||||||||  |||| |||||||| ||| |||||||||||||||||||||||    
T  52756731 aaatacattcacttatgttgacctaaatttctcttataaataggaccggag 52756681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 301
Target Start/End: Original strand, 50430492 - 50430533
Alignment:
Q  260 aaatacatcaacttttgttgacccaaaattctcttataaata 301  Q
    ||||||||||||||||||||||||||  | ||||||||||||    
T  50430492 aaatacatcaacttttgttgacccaacttgctcttataaata 50430533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 301
Target Start/End: Original strand, 6422530 - 6422582
Alignment:
Q  249 aatttttaactaaatacatcaacttttgttgacccaaaattctcttataaata 301  Q
    |||||| ||||||||| ||||| ||||||||||| |||  |||||||||||||    
T  6422530 aattttaaactaaatatatcaatttttgttgacctaaatatctcttataaata 6422582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 181 - 301
Target Start/End: Complemental strand, 23226138 - 23226018
Alignment:
Q  181 tatactactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttga 280  Q
    |||||||||  ||||  |||||||||||  ||| |||| |||||||||||||  |||||| ||  |  |||||| ||||  ||||||||| |||||||||    
T  23226138 tatactacttcctccaatcctatttatagaagatatttgggtcaacaaaagtttatgtatctgatccaaattttgaactggatacatcaatttttgttga 23226039  T
Q  281 cccaaaattctcttataaata 301  Q
     | |||  |||||||||||||    
T  23226038 tctaaatatctcttataaata 23226018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 200 - 240
Target Start/End: Complemental strand, 32822325 - 32822285
Alignment:
Q  200 ctatttataagagaaatttaggtcaacaaaagtgaatgtat 240  Q
    |||||||||||| |||||||||||||||||| || ||||||    
T  32822325 ctatttataagaaaaatttaggtcaacaaaaatggatgtat 32822285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 192 - 232
Target Start/End: Complemental strand, 33621920 - 33621880
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagt 232  Q
    |||||||||||||||||||| || ||| |||||||||||||    
T  33621920 ctccggtcctatttataagataattttgggtcaacaaaagt 33621880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 262 - 318
Target Start/End: Complemental strand, 38160426 - 38160370
Alignment:
Q  262 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtaaa 318  Q
    ||||||||| ||||||||||| |||  ||||||||||||| ||| |||| |||||||    
T  38160426 atacatcaatttttgttgacctaaatctctcttataaatatgactggagagagtaaa 38160370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 38160372 - 38160416
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaa 230  Q
    |||| ||||| ||| ||||||||||||| ||||||||||||||||    
T  38160372 tactctctccagtcatatttataagagagatttaggtcaacaaaa 38160416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 260 - 316
Target Start/End: Original strand, 41469840 - 41469896
Alignment:
Q  260 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    ||||||||  ||||||||||||| ||| |||| ||||||||||||||| ||| ||||    
T  41469840 aaatacattcacttttgttgacctaaatttcttttataaataggaccgaaggaagta 41469896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 123; Significance: 5e-63; HSPs: 73)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 186 - 316
Target Start/End: Complemental strand, 2787962 - 2787832
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  2787962 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgctgacccaa 2787863  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||||    
T  2787862 aattctcttataaataggaccggagggagta 2787832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 186 - 316
Target Start/End: Original strand, 10297979 - 10298109
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  10297979 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 10298078  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||||    
T  10298079 aattctcttataaataggaccggagggagta 10298109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 186 - 316
Target Start/End: Complemental strand, 19557182 - 19557052
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  19557182 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 19557083  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||||    
T  19557082 aattctcttataaataggaccggagggagta 19557052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 186 - 316
Target Start/End: Complemental strand, 49823511 - 49823381
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  49823511 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 49823412  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||||    
T  49823411 aattctcttataaataggaccggagggagta 49823381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 181 - 317
Target Start/End: Original strand, 48340392 - 48340528
Alignment:
Q  181 tatactactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttga 280  Q
    |||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  48340392 tatagtactacctccggtcctatttacaagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttga 48340491  T
Q  281 cccaaaattctcttataaataggaccggagggagtaa 317  Q
    |||||||||||||||||||||||||||||||||||||    
T  48340492 cccaaaattctcttataaataggaccggagggagtaa 48340528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 181 - 316
Target Start/End: Original strand, 22721926 - 22722061
Alignment:
Q  181 tatactactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttga 280  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  22721926 tataatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttga 22722025  T
Q  281 cccaaaattctcttataaataggaccggagggagta 316  Q
    ||||||||||||||||||||||||||||| ||||||    
T  22722026 cccaaaattctcttataaataggaccggatggagta 22722061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 186 - 316
Target Start/End: Complemental strand, 34080160 - 34080030
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  34080160 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaacaagatacatcaacttttgttgacccaa 34080061  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||||    
T  34080060 aattctcttataaataggaccggagggagta 34080030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 186 - 316
Target Start/End: Complemental strand, 40691126 - 40690996
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  40691126 tactaactccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 40691027  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||||    
T  40691026 aattctcttataaataggaccggagggagta 40690996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 192 - 316
Target Start/End: Original strand, 17653718 - 17653842
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  17653718 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 17653817  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||||||||||||| ||||    
T  17653818 cttataaataggaccggaggtagta 17653842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 192 - 316
Target Start/End: Original strand, 37508927 - 37509051
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  37508927 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 37509026  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||||||||||||| ||||    
T  37509027 cttataaataggaccggaggtagta 37509051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 186 - 316
Target Start/End: Original strand, 4238594 - 4238724
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  4238594 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccaaa 4238693  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||| ||||    
T  4238694 aattctcttataaataggaccggaggtagta 4238724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 186 - 316
Target Start/End: Original strand, 8437425 - 8437555
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||    
T  8437425 tactacctccggtcctatttataagagaaatttaggtcaataaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaa 8437524  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||||    
T  8437525 aattctcttataaataggaccggagggagta 8437555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 186 - 316
Target Start/End: Complemental strand, 8817516 - 8817386
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  8817516 tactaccttcggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 8817417  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||| ||||||    
T  8817416 aattctcttataaataggaccggaaggagta 8817386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 186 - 316
Target Start/End: Complemental strand, 21295456 - 21295326
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||    
T  21295456 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaattagatacatcaacttttgttgacctaa 21295357  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||||    
T  21295356 aattctcttataaataggaccggagggagta 21295326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 186 - 316
Target Start/End: Original strand, 38964392 - 38964522
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  38964392 tactacctccggtcctatttataagagaaatttagatcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccaaa 38964491  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||||    
T  38964492 aattctcttataaataggaccggagggagta 38964522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 186 - 316
Target Start/End: Complemental strand, 44785526 - 44785396
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  44785526 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 44785427  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    ||||||||||||||||| |||||||| ||||    
T  44785426 aattctcttataaatagaaccggaggaagta 44785396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 186 - 316
Target Start/End: Original strand, 51406673 - 51406803
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  51406673 tactacctccggtcttatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaatttttgttgacccaa 51406772  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||||    
T  51406773 aattctcttataaataggaccggagggagta 51406803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 192 - 316
Target Start/End: Original strand, 46208036 - 46208160
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||    
T  46208036 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgacctaaaattct 46208135  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||    
T  46208136 cttataaataggaccggagggagta 46208160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 186 - 313
Target Start/End: Complemental strand, 9111624 - 9111497
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  9111624 tactaccttcggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttgaactgaatttttaactagatacatcaacttttgttgacccaa 9111525  T
Q  286 aattctcttataaataggaccggaggga 313  Q
    ||||||||||||||||||||||||||||    
T  9111524 aattctcttataaataggaccggaggga 9111497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 186 - 313
Target Start/End: Complemental strand, 42507485 - 42507358
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  42507485 tactacctccggtcctatttataatagaaatttaggtcaacaaaagtgaatgtatttggactgaattttgaactagatacatcaacttttgttgacccaa 42507386  T
Q  286 aattctcttataaataggaccggaggga 313  Q
    ||||||||||||||||||||||||||||    
T  42507385 aattctcttataaataggaccggaggga 42507358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 186 - 316
Target Start/End: Complemental strand, 42170476 - 42170346
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||    
T  42170476 tactacctccggtcttatttataagagaaatttaggtcaacaaaagtgaatgtatttggagtgaatttttaaccagatacatcaacttttgttgacccaa 42170377  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    ||||||||||||||||||||| || ||||||    
T  42170376 aattctcttataaataggaccagatggagta 42170346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 192 - 317
Target Start/End: Complemental strand, 6013460 - 6013335
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||  ||||||||||||||||||||||    
T  6013460 ctccagtccaatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataaatttacttttgttgacccaaaattct 6013361  T
Q  292 cttataaataggaccggagggagtaa 317  Q
    ||||||||||||||||||||||||||    
T  6013360 cttataaataggaccggagggagtaa 6013335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 192 - 316
Target Start/End: Complemental strand, 36095804 - 36095680
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  36095804 ctccggtcctatttataagataaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgatccaaaattct 36095705  T
Q  292 cttataaataggaccggagggagta 316  Q
    ||| |||||| |||||||| |||||    
T  36095704 cttgtaaataagaccggagtgagta 36095680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 195 - 316
Target Start/End: Original strand, 35513482 - 35513603
Alignment:
Q  195 cggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctt 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||| ||| |||||| ||    
T  35513482 cggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaccttttattgatccagaattctttt 35513581  T
Q  295 ataaataggaccggagggagta 316  Q
    |||||||||| |||||||||||    
T  35513582 ataaataggatcggagggagta 35513603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 193 - 304
Target Start/End: Complemental strand, 33943055 - 33942944
Alignment:
Q  193 tccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctc 292  Q
    |||| |||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||    
T  33943055 tccgatcctatttataaaagaaagttaggtcaacaaaagttaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaagtttctc 33942956  T
Q  293 ttataaatagga 304  Q
    ||||||||||||    
T  33942955 ttataaatagga 33942944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 192 - 320
Target Start/End: Original strand, 9213522 - 9213650
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    |||||||||||||||||| ||| ||||  ||||||||||||  |||||| |||||| | ||| |||| ||||||||||| ||||||||||| ||| ||||    
T  9213522 ctccggtcctatttataaaagacattttagtcaacaaaagttgatgtatctggactaattttataaccaaatacatcaatttttgttgacctaaatttct 9213621  T
Q  292 cttataaataggaccggagggagtaaaat 320  Q
    || ||||||||||| ||||||||||||||    
T  9213622 ctaataaataggacgggagggagtaaaat 9213650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 194 - 317
Target Start/End: Original strand, 5323214 - 5323338
Alignment:
Q  194 ccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaattttt-aactaaatacatcaacttttgttgacccaaaattctc 292  Q
    ||||||||||||| || ||||| ||  ||||||||||   |||||||||| | ||||||||| ||| ||||||||||||||||||||||||||| ||  |    
T  5323214 ccggtcctatttacaaaagaaaattgagtcaacaaaaaataatgtatttgaattgaattttttaaccaaatacatcaacttttgttgacccaaattttac 5323313  T
Q  293 ttataaataggaccggagggagtaa 317  Q
    |||||||||| | ||||||||||||    
T  5323314 ttataaatagtatcggagggagtaa 5323338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 195 - 317
Target Start/End: Original strand, 34988084 - 34988206
Alignment:
Q  195 cggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctt 294  Q
    ||||||||||||| ||||| |||| |||||||||||||  || ||| ||| |    |||||||||| ||||||||||| |||||||| ||||  | ||||    
T  34988084 cggtcctatttattagagacatttgggtcaacaaaagttgatctatctggtccacttttttaactagatacatcaactattgttgactcaaatatttctt 34988183  T
Q  295 ataaataggaccggagggagtaa 317  Q
    |||||||||||||||||||||||    
T  34988184 ataaataggaccggagggagtaa 34988206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 186 - 316
Target Start/End: Complemental strand, 17653842 - 17653712
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||    
T  17653842 tactacctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 17653743  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    | |||||||||||||||||||||||||||||    
T  17653742 atttctcttataaataggaccggagggagta 17653712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 186 - 316
Target Start/End: Complemental strand, 37509051 - 37508921
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||    
T  37509051 tactacctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 37508952  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    | |||||||||||||||||||||||||||||    
T  37508951 atttctcttataaataggaccggagggagta 37508921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 192 - 316
Target Start/End: Complemental strand, 46208154 - 46208030
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| |||||||||||||||||  |||||| |      || ||    | ||||||||  ||||||||||||| ||| ||||    
T  46208154 ctccggtcctatttataagagaattttaggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 46208055  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||    
T  46208054 cttataaataggaccggagggagta 46208030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 186 - 316
Target Start/End: Complemental strand, 4238724 - 4238594
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||    
T  4238724 tactacctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 4238625  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    | |||||||||||||||||||||||| ||||    
T  4238624 atttctcttataaataggaccggaggtagta 4238594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 262 - 316
Target Start/End: Complemental strand, 9027196 - 9027142
Alignment:
Q  262 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    ||||||||||||||||||||||||  || ||||||||||||||||||||||||||    
T  9027196 atacatcaacttttgttgacccaactttatcttataaataggaccggagggagta 9027142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 183 - 316
Target Start/End: Original strand, 19557049 - 19557182
Alignment:
Q  183 tactactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacc 282  Q
    |||||||  ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  |||||||||||||    
T  19557049 tactactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacc 19557148  T
Q  283 caaaattctcttataaataggaccggagggagta 316  Q
     ||| |||||||||||||||||||||||| ||||    
T  19557149 taaatttctcttataaataggaccggaggtagta 19557182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 192 - 316
Target Start/End: Original strand, 21295332 - 21295456
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaattttta-actaaatacatcaacttttgttgacccaaaattc 290  Q
    ||||||||||||||||||||||| |||||||||||||||||  |||||| |  | | ||  || |  | ||||||||  ||||||||||||| ||| |||    
T  21295332 ctccggtcctatttataagagaattttaggtcaacaaaagttgatgtatct-aattaaaaattcagtccaaatacattcacttttgttgacctaaatttc 21295430  T
Q  291 tcttataaataggaccggagggagta 316  Q
    ||||||||||||||||||||| ||||    
T  21295431 tcttataaataggaccggaggtagta 21295456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 183 - 316
Target Start/End: Original strand, 34080027 - 34080160
Alignment:
Q  183 tactactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacc 282  Q
    |||||||  ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  |||||||||||||    
T  34080027 tactactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatcttgttaaaaattcagtccaaatacattcacttttgttgacc 34080126  T
Q  283 caaaattctcttataaataggaccggagggagta 316  Q
     ||| |||||||||||||||||||||||| ||||    
T  34080127 taaatttctcttataaataggaccggaggtagta 34080160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 198 - 271
Target Start/End: Original strand, 43323072 - 43323145
Alignment:
Q  198 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaac 271  Q
    |||||||||||||| ||| || |||||||||||||  ||||||||||| | |||||||||| ||||||||||||    
T  43323072 tcctatttataagaaaaaattgggtcaacaaaagttgatgtatttggattaaatttttaaccaaatacatcaac 43323145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 192 - 316
Target Start/End: Complemental strand, 9213640 - 9213516
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    |||| ||||||||||| |||||||||||||||||||||| |  ||||||||||    ||  ||   | | ||||||||||||||||||||  |||  |||    
T  9213640 ctcccgtcctatttattagagaaatttaggtcaacaaaaattgatgtatttggttataaaattagtccagatacatcaacttttgttgactaaaatgtct 9213541  T
Q  292 cttataaataggaccggagggagta 316  Q
     ||||||||||||||||||||||||    
T  9213540 tttataaataggaccggagggagta 9213516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 192 - 316
Target Start/End: Complemental strand, 10298103 - 10297979
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  10298103 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 10298004  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||||||||||||| ||||    
T  10298003 cttataaataggaccggaggtagta 10297979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 200 - 316
Target Start/End: Complemental strand, 26019595 - 26019480
Alignment:
Q  200 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaa 299  Q
    |||||||||||||||| || ||| |||||| || ||||||| | |||| |||||| ||| | |||||| |||||| ||||||| ||  ||||||||||||    
T  26019595 ctatttataagagaaagttgggttaacaaa-gttaatgtatcttgactaaattttgaaccagatacataaactttggttgaccaaattttctcttataaa 26019497  T
Q  300 taggaccggagggagta 316  Q
    ||||| |||| ||||||    
T  26019496 taggatcggaaggagta 26019480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 192 - 316
Target Start/End: Original strand, 49823387 - 49823511
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  49823387 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 49823486  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||||||||||||| ||||    
T  49823487 cttataaataggaccggaggtagta 49823511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 262 - 317
Target Start/End: Original strand, 2131748 - 2131803
Alignment:
Q  262 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtaa 317  Q
    |||||||||||||||||||||||||  ||||| |||| ||||||||||||||||||    
T  2131748 atacatcaacttttgttgacccaaatgtctctcataagtaggaccggagggagtaa 2131803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 193 - 316
Target Start/End: Complemental strand, 22722054 - 22721931
Alignment:
Q  193 tccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctc 292  Q
    |||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| |||||    
T  22722054 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 22721955  T
Q  293 ttataaataggaccggagggagta 316  Q
    ||||||||||||||||||| ||||    
T  22721954 ttataaataggaccggaggtagta 22721931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 186 - 241
Target Start/End: Original strand, 33128206 - 33128261
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatt 241  Q
    |||| ||||| |||||| ||||||||||||||||||||||||||||| ||||||||    
T  33128206 tactctctccagtcctaattataagagaaatttaggtcaacaaaagttaatgtatt 33128261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 203 - 269
Target Start/End: Complemental strand, 8952009 - 8951943
Alignment:
Q  203 tttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 269  Q
    ||||||||||||| ||   || |||||||| ||||||||||||||||||||||||| ||||||||||    
T  8952009 tttataagagaaagttgaatcgacaaaagttaatgtatttggactgaatttttaacaaaatacatca 8951943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 201 - 286
Target Start/End: Complemental strand, 29285873 - 29285790
Alignment:
Q  201 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaa 286  Q
    ||||||||||| |||||||||||||||||||||||  ||| ||  || |||||| ||||| |||||| |||||||||||| |||||    
T  29285873 tatttataagataaatttaggtcaacaaaagtgaa--tatctgatctaaattttgaactacatacataaacttttgttgatccaaa 29285790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 193 - 282
Target Start/End: Original strand, 8092595 - 8092684
Alignment:
Q  193 tccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacc 282  Q
    ||||||||||||||||||||||| ||   ||||| |||||  |||||| | |||| |||||||||| | |||||||||||| ||||||||    
T  8092595 tccggtcctatttataagagaaaattgaatcaactaaagttgatgtatctcgactaaatttttaaccagatacatcaacttctgttgacc 8092684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 220 - 317
Target Start/End: Original strand, 30443762 - 30443859
Alignment:
Q  220 ggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtaa 317  Q
    ||||||||||||| ||||||||||| ||  ||| | ||| ||||||||||||||| ||||||| |    |||||| |||| |||||||||||||||||    
T  30443762 ggtcaacaaaagttaatgtatttggtctatattatgaaccaaatacatcaactttagttgaccaatttgtctcttgtaaaaaggaccggagggagtaa 30443859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 260 - 317
Target Start/End: Complemental strand, 35513529 - 35513472
Alignment:
Q  260 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtaa 317  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||| |||||||||    
T  35513529 aaatacattcacttttgttgacctaaatttctcttataaataggaccgaagggagtaa 35513472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 316
Target Start/End: Original strand, 36095754 - 36095810
Alignment:
Q  260 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    ||||||||  ||||||||||||| ||| || ||||||||||||||||||||||||||    
T  36095754 aaatacattcacttttgttgacctaaatttatcttataaataggaccggagggagta 36095810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 316
Target Start/End: Complemental strand, 38964516 - 38964392
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||| | ||| ||||    
T  38964516 ctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttct 38964417  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||||||||||||| ||||    
T  38964416 cttataaataggaccggaggtagta 38964392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 196 - 316
Target Start/End: Original strand, 42170356 - 42170476
Alignment:
Q  196 ggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctta 295  Q
    ||||||||||||||||||| ||| |||||||||||||  |||||| |||    || ||    | ||||||||  ||||||||||||| ||| ||||||||    
T  42170356 ggtcctatttataagagaattttgggtcaacaaaagttgatgtatctggttaaaaattcactccaaatacattcacttttgttgacctaaatttctctta 42170455  T
Q  296 taaataggaccggagggagta 316  Q
    |||||| ||||||||| ||||    
T  42170456 taaataagaccggaggtagta 42170476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 316
Target Start/End: Original strand, 42507361 - 42507485
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  42507361 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttcaaaattcagtccaaatacattcacttttgttgacctaaatttct 42507460  T
Q  292 cttataaataggaccggagggagta 316  Q
     ||||||||||||||||||| ||||    
T  42507461 attataaataggaccggaggtagta 42507485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 316
Target Start/End: Original strand, 44785470 - 44785526
Alignment:
Q  260 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  44785470 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 44785526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 316
Target Start/End: Complemental strand, 48340521 - 48340397
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  48340521 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 48340422  T
Q  292 cttataaataggaccggagggagta 316  Q
    ||| |||||||||||||||| ||||    
T  48340421 cttgtaaataggaccggaggtagta 48340397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 193 - 316
Target Start/End: Original strand, 8817393 - 8817516
Alignment:
Q  193 tccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctc 292  Q
    |||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| |||||    
T  8817393 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 8817492  T
Q  293 ttataaataggaccggagggagta 316  Q
    ||||||||||||||| ||| ||||    
T  8817493 ttataaataggaccgaaggtagta 8817516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 201 - 316
Target Start/End: Complemental strand, 33128319 - 33128206
Alignment:
Q  201 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaat 300  Q
    ||||||||||||| ||||| ||||||||||||  || ||| ||| |  |||||| |||  ||||||| |||||||||||||| ||| ||||||||||| |    
T  33128319 tatttataagagacatttaagtcaacaaaagttgat-tatctggtcc-aattttaaaccgaatacattaacttttgttgacctaaatttctcttataatt 33128222  T
Q  301 aggaccggagggagta 316  Q
    ||||| |||| |||||    
T  33128221 aggactggagagagta 33128206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 2787906 - 2787956
Alignment:
Q  260 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggag 310  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||    
T  2787906 aaatacattcacttttgttgacctaaatttctcttataaataggaccggag 2787956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 266 - 316
Target Start/End: Complemental strand, 34988125 - 34988075
Alignment:
Q  266 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||  ||||| ||||||||||||| ||||||||    
T  34988125 atcaacttttgttgacccaaatgtctctaataaataggaccgaagggagta 34988075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 310
Target Start/End: Original strand, 40691002 - 40691120
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||| ||| ||| ||||    
T  40691002 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttaacctaaatttct 40691101  T
Q  292 cttataaataggaccggag 310  Q
    |||||||||||||||||||    
T  40691102 cttataaataggaccggag 40691120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 192 - 313
Target Start/End: Original strand, 6013342 - 6013463
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| ||||||||||||| ||| ||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  6013342 ctccggtcctatttataagagaattttgggtcaacaaaagtaaatttatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 6013441  T
Q  292 cttataaataggaccggaggga 313  Q
    ||||||||| |||| |||||||    
T  6013442 cttataaattggactggaggga 6013463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 192 - 316
Target Start/End: Original strand, 9111500 - 9111624
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaact-aaatacatcaacttttgttgacccaaaattc 290  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |  | ||  || |  | ||||||||  ||||||||||||| ||| |||    
T  9111500 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctag-ttaaaaattcagttcaaatacattcacttttgttgacctaaatttc 9111598  T
Q  291 tcttataaataggaccggagggagta 316  Q
    ||||||||||||||||| ||| ||||    
T  9111599 tcttataaataggaccgaaggtagta 9111624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 316
Target Start/End: Complemental strand, 8437549 - 8437425
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| |||  ||||||||||||  |||||| | |    || ||    | ||||||||  |||||| |||||| ||| ||||    
T  8437549 ctccggtcctatttataagagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttattgacctaaatttct 8437450  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||||||||||||| ||||    
T  8437449 cttataaataggaccggaggtagta 8437425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 304
Target Start/End: Complemental strand, 43323116 - 43323072
Alignment:
Q  260 aaatacatcaacttttgttgacccaaaattctcttataaatagga 304  Q
    ||||||||||||||||||||||||||  || ||||||||||||||    
T  43323116 aaatacatcaacttttgttgacccaattttttcttataaatagga 43323072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 316
Target Start/End: Complemental strand, 51406797 - 51406673
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| ||||||||||| |  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  51406797 ctccggtcctatttataagagaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 51406698  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||| ||||||||| ||||    
T  51406697 cttataaataagaccggaggtagta 51406673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 26001184 - 26001141
Alignment:
Q  196 ggtcctatttataagagaaatttaggtcaacaaaagtgaatgta 239  Q
    |||| ||||||||||||||||||| |||||||||||| ||||||    
T  26001184 ggtcatatttataagagaaatttaagtcaacaaaagttaatgta 26001141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 316
Target Start/End: Complemental strand, 45652128 - 45652069
Alignment:
Q  257 actaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    |||| ||||||| | |||||||||| ||||  ||||||||||||||||| ||||||||||    
T  45652128 actagatacatccatttttgttgactcaaatgtctcttataaataggactggagggagta 45652069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 192 - 286
Target Start/End: Complemental strand, 2131796 - 2131702
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaa 286  Q
    ||||||||||| |||| ||||| |||| |||||||||||||  |||||| ||| || ||||||  || |  ||||  ||||||||||||||||||    
T  2131796 ctccggtcctacttatgagagacatttgggtcaacaaaagttgatgtatctggtctaaattttgcaccaggtacagtaacttttgttgacccaaa 2131702  T

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Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 192 - 232
Target Start/End: Original strand, 2787838 - 2787878
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagt 232  Q
    ||||||||||||||||||||||| ||| ||||| |||||||    
T  2787838 ctccggtcctatttataagagaattttgggtcagcaaaagt 2787878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 192 - 232
Target Start/End: Original strand, 9027148 - 9027188
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagt 232  Q
    |||||||||||||||||||| ||| || |||||||||||||    
T  9027148 ctccggtcctatttataagataaagttgggtcaacaaaagt 9027188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 260 - 316
Target Start/End: Original strand, 33943006 - 33943062
Alignment:
Q  260 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    |||||||| |||||||||||||| ||  |||| |||||||||||| |||| ||||||    
T  33943006 aaatacattaacttttgttgacctaactttcttttataaataggatcggaaggagta 33943062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 192 - 232
Target Start/End: Original strand, 44785402 - 44785442
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagt 232  Q
    ||||||| ||||||||||||||| ||| |||||||||||||    
T  44785402 ctccggttctatttataagagaattttgggtcaacaaaagt 44785442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 317
Target Start/End: Original strand, 47188956 - 47189004
Alignment:
Q  269 aacttttgttgacccaaaattctcttataaataggaccggagggagtaa 317  Q
    |||||||||||| |||| ||||| ||||||||| || ||||||||||||    
T  47188956 aacttttgttgatccaacattcttttataaatatgatcggagggagtaa 47189004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 120; Significance: 3e-61; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 181 - 316
Target Start/End: Original strand, 23780 - 23915
Alignment:
Q  181 tatactactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttga 280  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  23780 tataatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttga 23879  T
Q  281 cccaaaattctcttataaataggaccggagggagta 316  Q
    ||||||||| ||||||||||||||||||||||||||    
T  23880 cccaaaattttcttataaataggaccggagggagta 23915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 316
Target Start/End: Complemental strand, 23909 - 23785
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    |||||||||||||||||||| || ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  23909 ctccggtcctatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 23810  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||||||||||||| ||||    
T  23809 cttataaataggaccggaggtagta 23785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 119; Significance: 1e-60; HSPs: 2)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 186 - 316
Target Start/End: Original strand, 12860 - 12990
Alignment:
Q  186 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 285  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  12860 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgctgacccaa 12959  T
Q  286 aattctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||||    
T  12960 aattctcttataaataggaccggagggagta 12990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 316
Target Start/End: Complemental strand, 12984 - 12860
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||||||||||||||||||| ||| ||||| |||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  12984 ctccggtcctatttataagagaattttgggtcagcaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 12885  T
Q  292 cttataaataggaccggagggagta 316  Q
    |||||||||||||||||||| ||||    
T  12884 cttataaataggaccggaggtagta 12860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 117; Significance: 2e-59; HSPs: 3)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 184 - 316
Target Start/End: Complemental strand, 6263 - 6131
Alignment:
Q  184 actactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgaccc 283  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  6263 actactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatgtggactgaatttttaactagatacatcaacttttgttgaccc 6164  T
Q  284 aaaattctcttataaataggaccggagggagta 316  Q
    |||||| ||||||||||||||||||||||||||    
T  6163 aaaattttcttataaataggaccggagggagta 6131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 316
Target Start/End: Original strand, 6215 - 6261
Alignment:
Q  270 acttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  6215 acttttgttgacctaaatttctcttataaataggaccggaggtagta 6261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 192 - 232
Target Start/End: Original strand, 6137 - 6177
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagt 232  Q
    |||||||||||||||||||| || ||| |||||||||||||    
T  6137 ctccggtcctatttataagaaaattttgggtcaacaaaagt 6177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1707 (Bit Score: 108; Significance: 4e-54; HSPs: 2)
Name: scaffold1707
Description:

Target: scaffold1707; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 193 - 304
Target Start/End: Original strand, 1342 - 1453
Alignment:
Q  193 tccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctc 292  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  1342 tccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctc 1441  T
Q  293 ttataaatagga 304  Q
    ||||||||||||    
T  1442 ttataaatagga 1453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1707; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 260 - 309
Target Start/End: Complemental strand, 1391 - 1342
Alignment:
Q  260 aaatacatcaacttttgttgacccaaaattctcttataaataggaccgga 309  Q
    ||||||||  ||||||||||||| ||| ||||||||||||||||||||||    
T  1391 aaatacattcacttttgttgacctaaatttctcttataaataggaccgga 1342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 65; Significance: 2e-28; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 192 - 316
Target Start/End: Complemental strand, 231427 - 231303
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||| ||||| |||||||||||| || | |||||||||||  |||||| ||||||||||||| |||||  || ||||||||||||||||| || |||||    
T  231427 ctccgatcctaattataagagaaagttggatcaacaaaagtttatgtatctggactgaattttgaactaggtatatcaacttttgttgacctaatattct 231328  T
Q  292 cttataaataggaccggagggagta 316  Q
    | |||||||||||||||||||||||    
T  231327 cctataaataggaccggagggagta 231303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 262 - 316
Target Start/End: Original strand, 231379 - 231433
Alignment:
Q  262 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    |||||| |||||||||||| ||||  ||||||||||| ||||| |||||||||||    
T  231379 atacataaacttttgttgatccaactttctcttataattaggatcggagggagta 231433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 192 - 232
Target Start/End: Original strand, 231309 - 231349
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagt 232  Q
    ||||||||||||||||| |||||  ||||||||||||||||    
T  231309 ctccggtcctatttataggagaatattaggtcaacaaaagt 231349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 197 - 317
Target Start/End: Complemental strand, 13845 - 13730
Alignment:
Q  197 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatc--aacttttgttgacccaaaattctctt 294  Q
    |||||| ||||||||||||||||||||||||||| | ||| |||||| ||||||||||||||| ||||||||  |||||||||||| ||      |||||    
T  13845 gtcctacttataagagaaatttaggtcaacaaaaattaatatatttgaactgaatttttaact-aatacatcaaaacttttgttgatcc------ctctt 13753  T
Q  295 ataaataggaccggagggagtaa 317  Q
    |||||||||||||||||||||||    
T  13752 ataaataggaccggagggagtaa 13730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 192 - 300
Target Start/End: Complemental strand, 108 - 1
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 291  Q
    ||||||| ||||||||| ||||||  | |||||||||||||  ||||||||||||| |||||||||| |||||||||||||||||||||| | |  ||||    
T  108 ctccggttctatttata-gagaaagattggtcaacaaaagttgatgtatttggactaaatttttaaccaaatacatcaacttttgttgactcgactttct 10  T
Q  292 cttataaat 300  Q
    |||||||||    
T  9 cttataaat 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 260 - 316
Target Start/End: Original strand, 59 - 114
Alignment:
Q  260 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 316  Q
    ||||||||||||||||||||||| |   ||||| ||||||||| |||||||||||||    
T  59 aaatacatcaacttttgttgaccaatctttctc-tataaatagaaccggagggagta 114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 282
Target Start/End: Complemental strand, 12477 - 12387
Alignment:
Q  192 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacc 282  Q
    |||||||||||||||||||||| |||| |||||| ||||||   ||| ||||| || |||| ||||| | ||||||||  |||||||||||    
T  12477 ctccggtcctatttataagagatattttggtcaaaaaaagttggtgtgtttggtctaaattcttaaccagatacatcacattttgttgacc 12387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 313
Target Start/End: Original strand, 12435 - 12480
Alignment:
Q  268 caacttttgttgacccaaaattctcttataaataggaccggaggga 313  Q
    |||||||| |||||| |||  |||||||||||||||||||||||||    
T  12435 caactttttttgaccaaaatatctcttataaataggaccggaggga 12480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 311
Target Start/End: Original strand, 312747 - 312843
Alignment:
Q  215 atttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagg 311  Q
    |||| ||||||||||||| ||||||| ||  |  |||||| ||||| ||||||||| ||||||||| | |||| |||||| ||||||  ||||||||    
T  312747 attttggtcaacaaaagttaatgtatctgatccaaattttaaactagatacatcaatttttgttgatcaaaaagtctcttttaaataaaaccggagg 312843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 288 - 316
Target Start/End: Complemental strand, 77372 - 77344
Alignment:
Q  288 ttctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||    
T  77372 ttctcttataaataggaccggagggagta 77344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 288 - 316
Target Start/End: Complemental strand, 492332 - 492304
Alignment:
Q  288 ttctcttataaataggaccggagggagta 316  Q
    |||||||||||||||||||||||||||||    
T  492332 ttctcttataaataggaccggagggagta 492304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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