View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2103_low_9 (Length: 292)
Name: NF2103_low_9
Description: NF2103
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2103_low_9 |
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Alignment Details
Target: chr1 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 17 - 274
Target Start/End: Complemental strand, 1241156 - 1240899
Alignment:
| Q |
17 |
aaaaaactcaatatgaaaccttcaacagaatcaaccaaggacacagccattgacattgataattcatcttccaaaagagtatctttctctgaccaacagc |
116 |
Q |
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| T |
1241156 |
aaaaaactcaatatgaaaccttcaacagaatcaaccaaggacacaaccattgacattgataattcatcttccaaaagagtatctttctctgaccaacagc |
1241057 |
T |
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| Q |
117 |
aacagcaccaacacaatgttcctttgttacttcaaccatcttatgcaagatcaaaatccatgatctttgatgaactaagaaactttcggatatgtcttaa |
216 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1241056 |
aacagcaccaacacaatgttcctttgttacttcagccatcttatgcaagatcaaaatccatgatctttgatgaactaagaaactttcggatatgtcttaa |
1240957 |
T |
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| Q |
217 |
atggtgtgctcttgatcactcatcttgtgttggaaaactcatttcttatgtttccttc |
274 |
Q |
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| T |
1240956 |
atggtgtgctcttgatcactcatcttgtgttggaaaactcatttcttatgtttccttc |
1240899 |
T |
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