View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2104-Insertion-3 (Length: 515)

Name: NF2104-Insertion-3
Description: NF2104
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2104-Insertion-3
NF2104-Insertion-3
[»] chr1 (49 HSPs)
chr1 (8-224)||(12728033-12728250)
chr1 (285-395)||(12728309-12728419)
chr1 (15-131)||(20054517-20054633)
chr1 (15-131)||(20054973-20055089)
chr1 (15-131)||(20055429-20055545)
chr1 (15-131)||(20055885-20056001)
chr1 (15-131)||(20056341-20056457)
chr1 (15-131)||(20057244-20057360)
chr1 (15-131)||(20054061-20054177)
chr1 (15-131)||(20057700-20057816)
chr1 (15-131)||(20845642-20845758)
chr1 (14-132)||(43057503-43057621)
chr1 (15-131)||(38340955-38341071)
chr1 (8-128)||(52250248-52250368)
chr1 (8-131)||(16451914-16452037)
chr1 (8-131)||(16461067-16461190)
chr1 (8-131)||(50002266-50002389)
chr1 (18-131)||(20056797-20056910)
chr1 (14-171)||(43057010-43057163)
chr1 (21-130)||(20060322-20060431)
chr1 (15-131)||(35759589-35759705)
chr1 (15-131)||(50002688-50002804)
chr1 (16-131)||(46693716-46693831)
chr1 (16-127)||(51372859-51372970)
chr1 (15-172)||(12883573-12883726)
chr1 (15-115)||(20061188-20061288)
chr1 (15-131)||(35760895-35761011)
chr1 (15-114)||(2328364-2328463)
chr1 (15-133)||(2634973-2635091)
chr1 (16-169)||(30872897-30873046)
chr1 (15-131)||(50003056-50003172)
chr1 (14-130)||(31822645-31822761)
chr1 (14-171)||(7548139-7548292)
chr1 (8-131)||(23180772-23180895)
chr1 (9-130)||(10820635-10820758)
chr1 (15-131)||(16907283-16907399)
chr1 (65-128)||(52250642-52250705)
chr1 (65-128)||(52250979-52251042)
chr1 (23-176)||(2634523-2634672)
chr1 (449-501)||(12728450-12728502)
chr1 (14-126)||(16440565-16440677)
chr1 (35-99)||(31823097-31823161)
chr1 (90-134)||(35009974-35010018)
chr1 (55-131)||(7229924-7230000)
chr1 (19-131)||(16410704-16410816)
chr1 (18-73)||(46411173-46411228)
chr1 (74-128)||(8278065-8278119)
chr1 (15-127)||(842918-843030)
chr1 (27-127)||(2739583-2739683)
[»] chr5 (44 HSPs)
chr5 (15-131)||(2474008-2474124)
chr5 (15-131)||(2474454-2474570)
chr5 (8-131)||(2193858-2193981)
chr5 (8-131)||(42788627-42788750)
chr5 (15-131)||(8642015-8642131)
chr5 (14-134)||(10927381-10927501)
chr5 (15-171)||(1821955-1822107)
chr5 (8-131)||(17445436-17445559)
chr5 (15-131)||(189117-189233)
chr5 (8-131)||(34372110-34372233)
chr5 (8-134)||(10926924-10927050)
chr5 (14-181)||(27646770-27646933)
chr5 (8-134)||(39146981-39147107)
chr5 (15-131)||(3887038-3887154)
chr5 (15-131)||(21886127-21886243)
chr5 (15-131)||(34371661-34371777)
chr5 (14-131)||(8391303-8391419)
chr5 (15-127)||(34867839-34867951)
chr5 (15-131)||(3886582-3886698)
chr5 (9-134)||(20039453-20039577)
chr5 (15-131)||(22556585-22556701)
chr5 (15-131)||(22557018-22557134)
chr5 (8-171)||(29680052-29680204)
chr5 (15-131)||(18750177-18750293)
chr5 (39-131)||(18304504-18304596)
chr5 (8-128)||(15512996-15513117)
chr5 (20-131)||(20858522-20858633)
chr5 (8-131)||(30719786-30719909)
chr5 (14-127)||(42429193-42429306)
chr5 (19-131)||(30684537-30684649)
chr5 (46-127)||(11757266-11757347)
chr5 (14-117)||(4673466-4673569)
chr5 (16-131)||(24182227-24182341)
chr5 (20-104)||(2058664-2058748)
chr5 (23-134)||(5066869-5066980)
chr5 (15-113)||(4657992-4658089)
chr5 (15-88)||(16370732-16370805)
chr5 (26-131)||(32574639-32574744)
chr5 (14-80)||(11160713-11160779)
chr5 (78-131)||(4102908-4102961)
chr5 (66-119)||(5785901-5785954)
chr5 (179-221)||(17445306-17445348)
chr5 (24-81)||(43356651-43356708)
chr5 (79-131)||(5785958-5786010)
[»] chr4 (62 HSPs)
chr4 (8-134)||(1645721-1645847)
chr4 (14-131)||(44471300-44471417)
chr4 (15-131)||(12691974-12692090)
chr4 (15-131)||(49998685-49998801)
chr4 (9-133)||(50398511-50398635)
chr4 (14-152)||(23942747-23942881)
chr4 (14-134)||(23943214-23943334)
chr4 (14-133)||(50398966-50399085)
chr4 (8-133)||(51331254-51331379)
chr4 (8-134)||(3169248-3169374)
chr4 (14-131)||(7678597-7678714)
chr4 (15-131)||(23350258-23350374)
chr4 (8-112)||(4127431-4127535)
chr4 (15-131)||(35871677-35871792)
chr4 (32-131)||(50814800-50814899)
chr4 (8-134)||(53996087-53996213)
chr4 (31-131)||(24628952-24629052)
chr4 (15-131)||(24629408-24629524)
chr4 (14-134)||(29628640-29628759)
chr4 (16-123)||(4127872-4127979)
chr4 (20-123)||(27029331-27029434)
chr4 (16-131)||(44470850-44470964)
chr4 (14-181)||(1464195-1464358)
chr4 (16-131)||(21220306-21220421)
chr4 (15-134)||(31817824-31817943)
chr4 (14-131)||(8467783-8467892)
chr4 (15-168)||(13613840-13613988)
chr4 (15-134)||(21067331-21067450)
chr4 (15-125)||(14571702-14571812)
chr4 (8-127)||(15306070-15306195)
chr4 (15-152)||(14351844-14351977)
chr4 (15-131)||(17628560-17628676)
chr4 (15-134)||(21067783-21067899)
chr4 (15-127)||(13266135-13266247)
chr4 (20-128)||(27026557-27026664)
chr4 (15-134)||(9423830-9423949)
chr4 (17-131)||(27578884-27578998)
chr4 (8-127)||(14572133-14572248)
chr4 (32-127)||(27578436-27578531)
chr4 (14-130)||(33764908-33765024)
chr4 (15-128)||(31817376-31817489)
chr4 (15-131)||(4185764-4185880)
chr4 (19-131)||(17029383-17029495)
chr4 (26-131)||(20306139-20306241)
chr4 (16-131)||(17629018-17629132)
chr4 (33-128)||(23091489-23091584)
chr4 (14-127)||(42838671-42838787)
chr4 (19-131)||(17028927-17029039)
chr4 (15-130)||(23976194-23976310)
chr4 (15-82)||(41869967-41870034)
chr4 (17-127)||(43928943-43929052)
chr4 (14-115)||(44831045-44831146)
chr4 (31-114)||(4186232-4186315)
chr4 (82-131)||(11828460-11828509)
chr4 (94-131)||(14571663-14571700)
chr4 (16-52)||(53854861-53854897)
chr4 (14-105)||(24271552-24271642)
chr4 (9-127)||(34554472-34554590)
chr4 (78-131)||(27578261-27578314)
chr4 (68-127)||(33294871-33294930)
chr4 (41-88)||(39902471-39902518)
chr4 (10-81)||(9882653-9882722)
[»] scaffold0499 (2 HSPs)
scaffold0499 (15-131)||(2032-2148)
scaffold0499 (179-221)||(1902-1944)
[»] chr8 (48 HSPs)
chr8 (15-131)||(17103130-17103246)
chr8 (15-131)||(22548976-22549092)
chr8 (15-131)||(22026428-22026544)
chr8 (8-131)||(12827235-12827358)
chr8 (14-134)||(6464888-6465008)
chr8 (15-131)||(22548530-22548646)
chr8 (15-131)||(27925948-27926064)
chr8 (15-131)||(41659086-41659202)
chr8 (15-126)||(10844932-10845043)
chr8 (15-128)||(10844599-10844712)
chr8 (14-134)||(2044106-2044226)
chr8 (15-131)||(25144821-25144937)
chr8 (15-131)||(25147585-25147701)
chr8 (8-131)||(27022319-27022442)
chr8 (8-134)||(8080320-8080446)
chr8 (15-131)||(12100740-12100856)
chr8 (15-134)||(32292446-32292565)
chr8 (16-131)||(34308460-34308575)
chr8 (16-134)||(33852236-33852354)
chr8 (19-127)||(25148020-25148128)
chr8 (15-170)||(28453387-28453538)
chr8 (15-134)||(41913019-41913138)
chr8 (16-131)||(34308916-34309035)
chr8 (10-176)||(15818956-15819117)
chr8 (15-181)||(27819181-27819343)
chr8 (9-127)||(3745144-3745262)
chr8 (31-133)||(21316088-21316190)
chr8 (14-111)||(22840530-22840627)
chr8 (15-124)||(28375042-28375151)
chr8 (44-127)||(31283636-31283719)
chr8 (15-116)||(3744687-3744788)
chr8 (28-133)||(30527461-30527566)
chr8 (10-134)||(15567534-15567658)
chr8 (15-87)||(27021904-27021976)
chr8 (15-133)||(1297056-1297174)
chr8 (20-134)||(22705226-22705329)
chr8 (18-128)||(30334892-30335002)
chr8 (17-81)||(15568036-15568100)
chr8 (65-134)||(10729722-10729791)
chr8 (55-134)||(25307855-25307932)
chr8 (65-128)||(10729670-10729733)
chr8 (179-221)||(17103335-17103377)
chr8 (19-77)||(17429553-17429611)
chr8 (72-134)||(44041986-44042048)
chr8 (15-76)||(6466760-6466820)
chr8 (184-221)||(10844466-10844503)
chr8 (14-63)||(29971450-29971499)
chr8 (16-73)||(36968434-36968491)
[»] chr3 (50 HSPs)
chr3 (15-131)||(28561795-28561911)
chr3 (15-131)||(31284257-31284373)
chr3 (14-131)||(13150535-13150652)
chr3 (14-131)||(39640985-39641102)
chr3 (14-134)||(20885095-20885215)
chr3 (14-134)||(25238662-25238782)
chr3 (8-131)||(11180015-11180138)
chr3 (18-152)||(4067324-4067454)
chr3 (15-131)||(14813998-14814114)
chr3 (8-131)||(13150080-13150203)
chr3 (8-131)||(32227542-32227665)
chr3 (17-131)||(50347797-50347911)
chr3 (15-131)||(16811430-16811546)
chr3 (8-131)||(32227202-32227325)
chr3 (16-131)||(32386715-32386830)
chr3 (8-134)||(25230226-25230352)
chr3 (8-134)||(25237813-25237939)
chr3 (14-172)||(30529735-30529888)
chr3 (14-134)||(25230683-25230803)
chr3 (14-134)||(25238270-25238390)
chr3 (15-127)||(27187315-27187427)
chr3 (15-131)||(8067329-8067445)
chr3 (15-131)||(29224373-29224489)
chr3 (15-131)||(39653213-39653329)
chr3 (23-130)||(14820211-14820318)
chr3 (15-132)||(7493930-7494047)
chr3 (14-111)||(32796936-32797033)
chr3 (15-128)||(41472350-41472462)
chr3 (16-119)||(25239070-25239173)
chr3 (15-134)||(25248160-25248279)
chr3 (15-134)||(25802526-25802645)
chr3 (8-134)||(2911137-2911263)
chr3 (8-134)||(37045077-37045203)
chr3 (15-134)||(7477240-7477359)
chr3 (15-168)||(25802952-25803101)
chr3 (15-128)||(16810974-16811087)
chr3 (16-130)||(41474047-41474161)
chr3 (15-114)||(26309987-26310086)
chr3 (15-133)||(31103937-31104057)
chr3 (34-131)||(3899868-3899965)
chr3 (55-131)||(53150793-53150869)
chr3 (34-82)||(3890046-3890094)
chr3 (94-130)||(15381258-15381294)
chr3 (26-130)||(15392570-15392674)
chr3 (94-130)||(15396493-15396529)
chr3 (26-130)||(15405606-15405710)
chr3 (94-130)||(15410629-15410665)
chr3 (26-130)||(15411015-15411119)
chr3 (26-130)||(15417431-15417535)
chr3 (15-47)||(47518384-47518416)
[»] chr7 (51 HSPs)
chr7 (8-131)||(2465775-2465898)
chr7 (8-133)||(6719053-6719178)
chr7 (14-131)||(42515592-42515709)
chr7 (15-131)||(2941738-2941854)
chr7 (15-131)||(13125117-13125233)
chr7 (8-131)||(2465966-2466089)
chr7 (8-131)||(28495896-28496019)
chr7 (8-131)||(34405572-34405695)
chr7 (8-131)||(36422294-36422417)
chr7 (15-134)||(42515141-42515260)
chr7 (15-176)||(25182410-25182567)
chr7 (14-134)||(35474099-35474219)
chr7 (16-131)||(9125009-9125124)
chr7 (8-131)||(28495589-28495712)
chr7 (8-134)||(46425783-46425909)
chr7 (14-134)||(679865-679984)
chr7 (15-131)||(2189193-2189309)
chr7 (15-131)||(2193305-2193421)
chr7 (14-127)||(6747583-6747696)
chr7 (16-134)||(2611630-2611748)
chr7 (14-169)||(22529182-22529333)
chr7 (17-134)||(35527099-35527216)
chr7 (15-127)||(5406573-5406685)
chr7 (15-168)||(9623257-9623405)
chr7 (21-115)||(11517386-11517480)
chr7 (16-130)||(26421287-26421401)
chr7 (15-127)||(18833335-18833447)
chr7 (15-134)||(26421738-26421857)
chr7 (16-122)||(31406574-31406680)
chr7 (14-152)||(29038984-29039118)
chr7 (15-134)||(29357434-29357553)
chr7 (56-131)||(13122486-13122561)
chr7 (65-131)||(7646459-7646525)
chr7 (15-102)||(31743834-31743921)
chr7 (65-131)||(7646514-7646580)
chr7 (15-119)||(36015404-36015508)
chr7 (16-87)||(43233463-43233534)
chr7 (15-128)||(20966100-20966213)
chr7 (16-116)||(11372501-11372601)
chr7 (15-119)||(16192368-16192472)
chr7 (80-131)||(43776271-43776322)
chr7 (15-115)||(1628765-1628862)
chr7 (14-63)||(26957606-26957655)
chr7 (38-132)||(7461331-7461424)
chr7 (15-63)||(6585657-6585705)
chr7 (15-127)||(11372948-11373060)
chr7 (83-134)||(3305326-3305377)
chr7 (32-127)||(37672226-37672321)
chr7 (187-221)||(7646676-7646710)
chr7 (15-52)||(13124761-13124798)
chr7 (15-67)||(2490088-2490140)
[»] chr2 (39 HSPs)
chr2 (8-131)||(8256568-8256691)
chr2 (15-133)||(16379442-16379560)
chr2 (15-131)||(41754338-41754454)
chr2 (15-134)||(16378986-16379105)
chr2 (19-134)||(33174556-33174671)
chr2 (8-128)||(29804724-29804844)
chr2 (15-131)||(30966739-30966855)
chr2 (15-130)||(30966283-30966398)
chr2 (8-133)||(33175000-33175124)
chr2 (15-131)||(24818375-24818491)
chr2 (15-131)||(25337978-25338094)
chr2 (14-131)||(11388236-11388352)
chr2 (18-131)||(33771053-33771166)
chr2 (14-133)||(1912573-1912691)
chr2 (16-131)||(5399798-5399913)
chr2 (14-134)||(1707089-1707209)
chr2 (14-134)||(38898890-38899010)
chr2 (15-132)||(25434036-25434153)
chr2 (14-131)||(11394583-11394698)
chr2 (15-127)||(29259605-29259717)
chr2 (14-116)||(18098874-18098976)
chr2 (15-129)||(30963703-30963817)
chr2 (19-168)||(27882874-27883019)
chr2 (31-169)||(15619963-15620097)
chr2 (15-131)||(30963244-30963360)
chr2 (15-128)||(13191023-13191136)
chr2 (14-130)||(83065-83181)
chr2 (18-129)||(8073944-8074055)
chr2 (31-169)||(15639799-15639933)
chr2 (23-127)||(30961868-30961972)
chr2 (15-120)||(20502072-20502176)
chr2 (15-87)||(1953204-1953276)
chr2 (14-131)||(16542033-16542151)
chr2 (72-131)||(32377697-32377756)
chr2 (28-127)||(37552629-37552726)
chr2 (14-76)||(18447954-18448016)
chr2 (17-69)||(8181394-8181446)
chr2 (17-81)||(36924453-36924519)
chr2 (98-131)||(32377888-32377921)
[»] scaffold0243 (1 HSPs)
scaffold0243 (15-131)||(1269-1385)
[»] scaffold0022 (4 HSPs)
scaffold0022 (15-131)||(162659-162775)
scaffold0022 (19-168)||(69763-69908)
scaffold0022 (65-131)||(163115-163181)
scaffold0022 (65-131)||(163170-163236)
[»] scaffold0168 (1 HSPs)
scaffold0168 (8-131)||(2784-2907)
[»] chr6 (48 HSPs)
chr6 (14-133)||(6330891-6331010)
chr6 (15-131)||(7911927-7912043)
chr6 (14-134)||(11062333-11062453)
chr6 (15-131)||(13191494-13191610)
chr6 (15-127)||(13492838-13492950)
chr6 (15-131)||(17027512-17027628)
chr6 (15-131)||(20850370-20850486)
chr6 (14-131)||(16520016-16520133)
chr6 (14-131)||(20896669-20896786)
chr6 (14-134)||(20126160-20126280)
chr6 (14-131)||(9352110-9352227)
chr6 (15-131)||(7912359-7912475)
chr6 (15-122)||(2681206-2681313)
chr6 (8-131)||(23776483-23776605)
chr6 (8-131)||(23986298-23986421)
chr6 (9-119)||(15929625-15929735)
chr6 (15-128)||(2890823-2890936)
chr6 (15-134)||(2720541-2720661)
chr6 (31-131)||(13492397-13492497)
chr6 (15-131)||(21312020-21312136)
chr6 (15-131)||(17731090-17731210)
chr6 (15-134)||(14771697-14771816)
chr6 (15-134)||(17851423-17851542)
chr6 (15-134)||(21311564-21311683)
chr6 (8-114)||(3652528-3652634)
chr6 (14-134)||(20732626-20732746)
chr6 (15-106)||(27334210-27334301)
chr6 (15-106)||(27394950-27395041)
chr6 (15-131)||(9440290-9440406)
chr6 (42-134)||(17850994-17851086)
chr6 (18-105)||(15929251-15929338)
chr6 (15-168)||(33774950-33775101)
chr6 (14-135)||(20735743-20735864)
chr6 (62-131)||(28780206-28780275)
chr6 (14-127)||(9440842-9440955)
chr6 (15-133)||(17205388-17205505)
chr6 (14-100)||(31821704-31821790)
chr6 (14-168)||(1991601-1991751)
chr6 (16-130)||(28583013-28583127)
chr6 (15-127)||(32292934-32293044)
chr6 (31-127)||(28065820-28065919)
chr6 (15-131)||(12194378-12194493)
chr6 (65-134)||(2891271-2891340)
chr6 (16-109)||(10964354-10964447)
chr6 (10-124)||(30729827-30729941)
chr6 (15-127)||(33470887-33470998)
chr6 (101-134)||(3652658-3652691)
chr6 (15-52)||(9440488-9440525)
[»] scaffold0024 (1 HSPs)
scaffold0024 (18-131)||(105772-105885)
[»] scaffold0322 (1 HSPs)
scaffold0322 (15-131)||(19015-19131)
[»] scaffold0020 (1 HSPs)
scaffold0020 (15-131)||(107444-107560)
[»] scaffold0040 (3 HSPs)
scaffold0040 (8-131)||(2191-2314)
scaffold0040 (179-223)||(2059-2103)
scaffold0040 (184-221)||(2517-2554)
[»] scaffold0002 (1 HSPs)
scaffold0002 (8-131)||(154799-154922)
[»] scaffold0018 (1 HSPs)
scaffold0018 (15-131)||(10349-10465)
[»] scaffold0557 (1 HSPs)
scaffold0557 (14-134)||(2153-2273)
[»] scaffold0047 (2 HSPs)
scaffold0047 (14-134)||(18113-18232)
scaffold0047 (8-133)||(17577-17702)
[»] scaffold0333 (2 HSPs)
scaffold0333 (15-131)||(4610-4726)
scaffold0333 (36-131)||(5091-5186)
[»] scaffold0005 (3 HSPs)
scaffold0005 (15-125)||(245564-245674)
scaffold0005 (8-127)||(245128-245243)
scaffold0005 (94-131)||(245676-245713)
[»] scaffold0389 (1 HSPs)
scaffold0389 (54-127)||(13518-13591)
[»] scaffold0391 (1 HSPs)
scaffold0391 (19-181)||(14794-14952)
[»] scaffold0277 (1 HSPs)
scaffold0277 (62-131)||(14683-14752)
[»] scaffold0088 (1 HSPs)
scaffold0088 (15-78)||(23722-23785)
[»] scaffold0664 (1 HSPs)
scaffold0664 (19-93)||(4001-4075)
[»] scaffold0007 (1 HSPs)
scaffold0007 (15-81)||(142305-142371)
[»] scaffold0036 (1 HSPs)
scaffold0036 (39-133)||(26143-26235)
[»] scaffold0101 (1 HSPs)
scaffold0101 (14-77)||(45434-45497)
[»] scaffold0217 (1 HSPs)
scaffold0217 (77-131)||(421-475)
[»] scaffold0137 (1 HSPs)
scaffold0137 (94-131)||(7070-7107)
[»] scaffold0071 (1 HSPs)
scaffold0071 (26-130)||(44703-44807)


Alignment Details
Target: chr1 (Bit Score: 194; Significance: 1e-105; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 8 - 224
Target Start/End: Original strand, 12728033 - 12728250
Alignment:
Q  8 gggacaacatggttgaaggaagacttataagaattgtttggt-actgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactcc 106  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  12728033 gggacaacatggttgaaggaagacttataagaattgtttggttactgcctatatcaacaagatgcatcttcttttcggtagcacattccataagaactcc 12728132  T
Q  107 acagttaagcgtgcttgacttggagtagctagtctttggatggatggccttctgagaagtttcccaaaaaacgtggagtcagtcgacaatcctaaaagtc 206  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  12728133 acagttaagcatgcttgacttggagtagctagtctttggatgggtggccttctgagaagtttcccaaaaaacgtggagtcagtcgacaatcctgaaagtc 12728232  T
Q  207 gtctgagatgttacatct 224  Q
    ||||||||||||||||||    
T  12728233 gtctgagatgttacatct 12728250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 285 - 395
Target Start/End: Original strand, 12728309 - 12728419
Alignment:
Q  285 gcacctaaatagtgcatttaagtattgtccaaaatgagaaagacataacctaacttgagcatttatttatgtggagtgtgactcaagtaagacagtctga 384  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  12728309 gcacctaaatagtgcatttaagtattgtccaaaatgagaaagacataacctaacttgagcatttatttatgtgaagtgtgactcaagtaagacagtctga 12728408  T
Q  385 aggactttaag 395  Q
    |||||||||||    
T  12728409 aggactttaag 12728419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 20054633 - 20054517
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  20054633 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 20054534  T
Q  115 gcgtgcttgacttggag 131  Q
    |||||||||||||||||    
T  20054533 gcgtgcttgacttggag 20054517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 20055089 - 20054973
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  20055089 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 20054990  T
Q  115 gcgtgcttgacttggag 131  Q
    |||||||||||||||||    
T  20054989 gcgtgcttgacttggag 20054973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 20055545 - 20055429
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  20055545 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 20055446  T
Q  115 gcgtgcttgacttggag 131  Q
    |||||||||||||||||    
T  20055445 gcgtgcttgacttggag 20055429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 20056001 - 20055885
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  20056001 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 20055902  T
Q  115 gcgtgcttgacttggag 131  Q
    |||||||||||||||||    
T  20055901 gcgtgcttgacttggag 20055885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 20056457 - 20056341
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  20056457 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 20056358  T
Q  115 gcgtgcttgacttggag 131  Q
    |||||||||||||||||    
T  20056357 gcgtgcttgacttggag 20056341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 20057360 - 20057244
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  20057360 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 20057261  T
Q  115 gcgtgcttgacttggag 131  Q
    |||||||||||||||||    
T  20057260 gcgtgcttgacttggag 20057244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 20054177 - 20054061
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  20054177 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 20054078  T
Q  115 gcgtgcttgacttggag 131  Q
    |||||||||||| ||||    
T  20054077 gcgtgcttgactaggag 20054061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 20057816 - 20057700
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    |||||||||| |||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  20057816 catggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 20057717  T
Q  115 gcgtgcttgacttggag 131  Q
    |||||||||||||||||    
T  20057716 gcgtgcttgacttggag 20057700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 20845758 - 20845642
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||| ||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  20845758 catggttgaaggaaggcttataagaattgtttgttactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 20845659  T
Q  115 gcgtgcttgacttggag 131  Q
    |||||||||||||||||    
T  20845658 gcgtgcttgacttggag 20845642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 43057621 - 43057503
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagtta 113  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  43057621 acatggttgaaggaaggcttataagaattgtttggtactacctatattaacaagatgcatcttcttttcggtagcccattccataagaactccacagtta 43057522  T
Q  114 agcgtgcttgacttggagt 132  Q
    |||||| ||||||||||||    
T  43057521 agcgtgattgacttggagt 43057503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 38340955 - 38341071
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||| ||||||||||||||| |||||||||    
T  38340955 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcatttcggtagctcattccataagaacttcacagttaa 38341054  T
Q  115 gcgtgcttgacttggag 131  Q
    |||||||||||||||||    
T  38341055 gcgtgcttgacttggag 38341071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 8 - 128
Target Start/End: Original strand, 52250248 - 52250368
Alignment:
Q  8 gggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactcca 107  Q
    ||||| ||||||| |||||||| ||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  52250248 gggactacatggtcgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactcca 52250347  T
Q  108 cagttaagcgtgcttgacttg 128  Q
    |||||||||||||||||||||    
T  52250348 cagttaagcgtgcttgacttg 52250368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 8 - 131
Target Start/End: Complemental strand, 16452037 - 16451914
Alignment:
Q  8 gggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactcca 107  Q
    ||||| |||||||||||||||  ||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||  ||||||||||||||||||    
T  16452037 gggactacatggttgaaggaaagcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagttcattccataagaactcca 16451938  T
Q  108 cagttaagcgtgcttgacttggag 131  Q
    ||||||||||||||||||||||||    
T  16451937 cagttaagcgtgcttgacttggag 16451914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 8 - 131
Target Start/End: Complemental strand, 16461190 - 16461067
Alignment:
Q  8 gggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactcca 107  Q
    ||||| |||||||||||||||  ||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||  ||||||||||||||||||    
T  16461190 gggactacatggttgaaggaaagcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagttcattccataagaactcca 16461091  T
Q  108 cagttaagcgtgcttgacttggag 131  Q
    ||||||||||||||||||||||||    
T  16461090 cagttaagcgtgcttgacttggag 16461067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 8 - 131
Target Start/End: Complemental strand, 50002389 - 50002266
Alignment:
Q  8 gggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactcca 107  Q
    ||||| |||||||||||||||| |||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  50002389 gggactacatggttgaaggaaggcttataagaattgtttggtactacctttatcaacaagatgcatcttcttttcggtagctcattccataagaactcca 50002290  T
Q  108 cagttaagcgtgcttgacttggag 131  Q
    ||||| || |||||||||||||||    
T  50002289 cagttgagtgtgcttgacttggag 50002266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 18 - 131
Target Start/End: Complemental strand, 20056910 - 20056797
Alignment:
Q  18 ggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagcg 117  Q
    |||||||||||| ||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  20056910 ggttgaaggaaggcttatgagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcg 20056811  T
Q  118 tgcttgacttggag 131  Q
    || |||||||||||    
T  20056810 tgtttgacttggag 20056797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 14 - 171
Target Start/End: Complemental strand, 43057163 - 43057010
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagtta 113  Q
    |||||||||||||||| |||| |||||||||||| |||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  43057163 acatggttgaaggaaggcttagaagaattgtttgatactacctatatcaacaagatgcatcttcttttcggtagcccattccataagaactccacagtta 43057064  T
Q  114 agcgtgcttgacttggagtagctagtctttggatggatggccttctgagaagtttccc 171  Q
    |||||| ||||||| |||    | |||||||||||| || ||| ||| ||||||||||    
T  43057063 agcgtgattgacttagag----tggtctttggatgggtgacctactgggaagtttccc 43057010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 21 - 130
Target Start/End: Complemental strand, 20060431 - 20060322
Alignment:
Q  21 tgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgtgc 120  Q
    ||||||||  |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  20060431 tgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagtgtgc 20060332  T
Q  121 ttgacttgga 130  Q
    ||||||||||    
T  20060331 ttgacttgga 20060322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 35759705 - 35759589
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||  |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||| || ||||||    
T  35759705 catggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaacttcatagttaa 35759606  T
Q  115 gcgtgcttgacttggag 131  Q
     ||||||||||||||||    
T  35759605 acgtgcttgacttggag 35759589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 50002804 - 50002688
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||  ||||||||||| ||||||    
T  50002804 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattctttaagaactccatagttaa 50002705  T
Q  115 gcgtgcttgacttggag 131  Q
    ||||| |||||||||||    
T  50002704 gcgtgtttgacttggag 50002688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 46693831 - 46693716
Alignment:
Q  16 atggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaag 115  Q
    |||||||||||||| ||||||| |||||||||||||| |||||||||| |||||||||||||||||||||| | |||| ||||| |||||||||||||||    
T  46693831 atggttgaaggaaggcttataaaaattgtttggtactacctatatcaacaagatgcatcttcttttcggtatctcatttcataataactccacagttaag 46693732  T
Q  116 cgtgcttgacttggag 131  Q
    ||||||||||||||||    
T  46693731 cgtgcttgacttggag 46693716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 16 - 127
Target Start/End: Complemental strand, 51372970 - 51372859
Alignment:
Q  16 atggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaag 115  Q
    |||||||||||||| |||||||||||||||| ||||| |||||||| | |||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  51372970 atggttgaaggaaggcttataagaattgtttagtactacctatatcgacaagatgcatcttattttcggtagctcattccataagaactccacagttaag 51372871  T
Q  116 cgtgcttgactt 127  Q
    ||||||||||||    
T  51372870 cgtgcttgactt 51372859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 15 - 172
Target Start/End: Original strand, 12883573 - 12883726
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    |||| ||||||||| ||||||||||||||||||||||| |||||||||| ||||||||| ||||||| |||||| |||||||||| ||||||||||||||    
T  12883573 catgattgaaggaatacttataagaattgtttggtactacctatatcaacaagatgcattttctttttggtagctcattccataaaaactccacagttaa 12883672  T
Q  115 gcgtgcttgacttggagtagctagtctttggatggatggccttctgagaagtttccca 172  Q
    | ||| |||||||| ||    |||| |||||||||||| ||| ||| |||||||||||    
T  12883673 gtgtgtttgacttgaag----tagtttttggatggatgacctactgggaagtttccca 12883726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 15 - 115
Target Start/End: Complemental strand, 20061288 - 20061188
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||  |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  20061288 catggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 20061189  T
Q  115 g 115  Q
    |    
T  20061188 g 20061188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 35761011 - 35760895
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||  |||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||| |||||||| ||||||||  ||||||    
T  35761011 catggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagctcattccatgagaactccgtagttaa 35760912  T
Q  115 gcgtgcttgacttggag 131  Q
    |||||||||||||||||    
T  35760911 gcgtgcttgacttggag 35760895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 15 - 114
Target Start/End: Original strand, 2328364 - 2328463
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  2328364 catggttgaaggaaggcttataagaattgtttggtactacctatattaacaagatgcatcttctttttggtagcacattccataagaactccacagttaa 2328463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 15 - 133
Target Start/End: Original strand, 2634973 - 2635091
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    |||||||||||||  ||| ||||||||||||||||||| |||||| ||| |||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  2634973 catggttgaaggataactcataagaattgtttggtactacctataccaacaagatgcatcttcttttcggtagctcattcaataagaactccacagttaa 2635072  T
Q  115 gcgtgcttgacttggagta 133  Q
    ||||| ||| |||||||||    
T  2635073 gcgtgtttggcttggagta 2635091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 16 - 169
Target Start/End: Complemental strand, 30873046 - 30872897
Alignment:
Q  16 atggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaag 115  Q
    |||||||||||||||||| ||||||||||||| |||| |||||||||| ||||||||||||||||| |||||  ||||| |||||||||||||| |||||    
T  30873046 atggttgaaggaagacttttaagaattgtttgatactacctatatcaacaagatgcatcttctttttggtagtccattctataagaactccacaattaag 30872947  T
Q  116 cgtgcttgacttggagtagctagtctttggatggatggccttctgagaagtttc 169  Q
    | ||||||||||| ||    |||||||||||||| || ||| |||| |||||||    
T  30872946 catgcttgacttgcag----tagtctttggatgggtgacctactgaaaagtttc 30872897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 50003172 - 50003056
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||| |||| |||||||||| ||||||| |||||| |||||||||| |||||||||||||||||| ||||| ||||||| ||||||| |||||||||    
T  50003172 catggttaaagggagacttataataattgttgggtactacctatatcaacaagatgcatcttcttttcagtagctcattccaaaagaacttcacagttaa 50003073  T
Q  115 gcgtgcttgacttggag 131  Q
    |||||||||||||||||    
T  50003072 gcgtgcttgacttggag 50003056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 31822761 - 31822645
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagtta 113  Q
    ||||||||||||||||| ||||||||||| ||||||||| | |||||||| || ||||||||||||||||||||| || |||| ||||||||||||||||    
T  31822761 acatggttgaaggaagatttataagaattatttggtactacatatatcaacaatatgcatcttcttttcggtagctcaatccaaaagaactccacagtta 31822662  T
Q  114 agcgtgcttgacttgga 130  Q
    |||||  ||||||||||    
T  31822661 agcgtttttgacttgga 31822645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 14 - 171
Target Start/End: Original strand, 7548139 - 7548292
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagtta 113  Q
    ||||| || ||||||||||||||| |||||||||||| |  ||||||||| ||||||||| ||||||| |||||| ||||  |||||||||||||| |||    
T  7548139 acatgattaaaggaagacttataaaaattgtttggtattaactatatcaacaagatgcatattctttttggtagcccatttgataagaactccacaatta 7548238  T
Q  114 agcgtgcttgacttggagtagctagtctttggatggatggccttctgagaagtttccc 171  Q
    ||||| ||||||||||||    |||||||||||||| || ||| | ||||||||||||    
T  7548239 agcgtacttgacttggag----tagtctttggatgggtgacctaccgagaagtttccc 7548292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 8 - 131
Target Start/End: Original strand, 23180772 - 23180895
Alignment:
Q  8 gggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactcca 107  Q
    ||||| || ||||||||||||   |||||||||||| |||||||| |||||||||| |||||| ||||||| |||| |||| ||||||||||||| ||||    
T  23180772 gggactacgtggttgaaggaatgattataagaattgcttggtactacctatatcaacaagatgtatcttctattcgctagcccattccataagaattcca 23180871  T
Q  108 cagttaagcgtgcttgacttggag 131  Q
    || |||||||||||||||||||||    
T  23180872 caattaagcgtgcttgacttggag 23180895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 130
Target Start/End: Original strand, 10820635 - 10820758
Alignment:
Q  9 ggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctttt--cggtagcacattccataagaactcc 106  Q
    |||| ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||| ||||  || |  | |||| |||||||| | |    
T  10820635 ggactacatggttgaaggaagatttataagaattgtttggtactacctatatcaataagatacatctttttttttcgatgactcatttcataagaaattc 10820734  T
Q  107 acagttaagcgtgcttgacttgga 130  Q
    ||||||||||||||||||||||||    
T  10820735 acagttaagcgtgcttgacttgga 10820758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 16907283 - 16907399
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    |||||||||| |||| |||||||||||||||||||||| |||||||||| ||||| |||||||||||| || |  ||||| | |||||||||| ||||||    
T  16907283 catggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatacatcttcttttcagtggtccattctacaagaactccatagttaa 16907382  T
Q  115 gcgtgcttgacttggag 131  Q
    ||||| |||||||||||    
T  16907383 gcgtgtttgacttggag 16907399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 65 - 128
Target Start/End: Original strand, 52250642 - 52250705
Alignment:
Q  65 aagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgtgcttgacttg 128  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  52250642 aagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttg 52250705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 65 - 128
Target Start/End: Original strand, 52250979 - 52251042
Alignment:
Q  65 aagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgtgcttgacttg 128  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  52250979 aagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttg 52251042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 23 - 176
Target Start/End: Original strand, 2634523 - 2634672
Alignment:
Q  23 aaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgtgctt 122  Q
    ||||||| |||  |||||||||||||||||  |||||  || ||||||||||||||||||| |||   |||| ||||||||| ||| ||||| |||||||    
T  2634523 aaggaaggcttgcaagaattgtttggtactagctatacaaacaagatgcatcttcttttcgatagtctattcaataagaacttcactgttaaacgtgctt 2634622  T
Q  123 gacttggagtagctagtctttggatggatggccttctgagaagtttcccaaaaa 176  Q
    |||||||||    ||||||||||||||||| | ||||| ||||||| |||||||    
T  2634623 gacttggag----tagtctttggatggatgacattctgggaagttttccaaaaa 2634672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 449 - 501
Target Start/End: Original strand, 12728450 - 12728502
Alignment:
Q  449 agtttgctttaggctgcaaacaaaaagcatgcctaaacctaatatattttgtg 501  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12728450 agtttgctttaggctgcaaacaaaaagcatgcctaaacctaatatattttgtg 12728502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 14 - 126
Target Start/End: Complemental strand, 16440677 - 16440565
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagtta 113  Q
    |||||||||||| |||||||||||||| |||||| |||| || ||| ||| ||||||||| ||||||| |||||| ||||| |||| |||| || |||||    
T  16440677 acatggttgaagaaagacttataagaactgtttgctactaccgataacaacaagatgcatattctttttggtagctcattctataataacttcaaagtta 16440578  T
Q  114 agcgtgcttgact 126  Q
    || ||| ||||||    
T  16440577 agtgtgattgact 16440565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 35 - 99
Target Start/End: Complemental strand, 31823161 - 31823097
Alignment:
Q  35 taagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataa 99  Q
    |||||||| ||||||||| ||||||||||||| |||||||||||||| |||||| ||||||||||    
T  31823161 taagaattatttggtactacctatatcaataaaatgcatcttctttttggtagctcattccataa 31823097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 90 - 134
Target Start/End: Complemental strand, 35010018 - 35009974
Alignment:
Q  90 cattccataagaactccacagttaagcgtgcttgacttggagtag 134  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  35010018 cattccataagaactccacggttaagcgtgcttgacttggagtag 35009974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 131
Target Start/End: Complemental strand, 7230000 - 7229924
Alignment:
Q  55 ctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgtgcttgacttggag 131  Q
    ||||||||| | || |||||||| |||||||||  |||| ||||||||||||| || ||||| || |||||||||||    
T  7230000 ctatatcaacacgaagcatcttcatttcggtagttcattacataagaactccatagataagcatgtttgacttggag 7229924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 16410816 - 16410704
Alignment:
Q  19 gttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgt 118  Q
    ||||||||||  |||||||||||| |||  |||| || ||| ||| |||||||||||| |||| ||||||  |||| | ||||||| || |||||| | |    
T  16410816 gttgaaggaaagcttataagaattatttactactaccaataccaacaagatgcatcttgtttttggtagcctattctagaagaacttcaaagttaaacat 16410717  T
Q  119 gcttgacttggag 131  Q
    | |||||||||||    
T  16410716 gtttgacttggag 16410704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 46411228 - 46411173
Alignment:
Q  18 ggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcat 73  Q
    |||||||| || | || |||||||| ||||||||| ||||||||||||||||||||    
T  46411228 ggttgaagaaaaatttttaagaattatttggtactacctatatcaataagatgcat 46411173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 74 - 128
Target Start/End: Original strand, 8278065 - 8278119
Alignment:
Q  74 cttcttttcggtagcacattccataagaactccacagttaagcgtgcttgacttg 128  Q
    |||||||| |||||  |||| |||||  |||||||||||||||||||||||||||    
T  8278065 cttctttttggtagtccatttcataaagactccacagttaagcgtgcttgacttg 8278119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 15 - 127
Target Start/End: Complemental strand, 843030 - 842918
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    |||| |||||||||| | | ||||||||||||||||||  | ||  ||| ||||||||| ||||||| | |||  | |  ||||||||||| |||||| |    
T  843030 catgattgaaggaagtcgtgtaagaattgtttggtactatccattccaacaagatgcatgttctttttgatagatcgtcacataagaactcaacagttga 842931  T
Q  115 gcgtgcttgactt 127  Q
     ||||||||||||    
T  842930 acgtgcttgactt 842918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 127
Target Start/End: Original strand, 2739583 - 2739683
Alignment:
Q  27 aagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgtgcttgact 126  Q
    |||||||||||||||||||| | ||| | |||||||| || ||| ||||||||||   |||   |||||||||||||| ||  |||||| ||| ||||||    
T  2739583 aagacttataagaattgtttagcactacatatatcaacaatatgtatcttcttttttatagtctattccataagaacttcatggttaagtgtgtttgact 2739682  T
Q  127 t 127  Q
    |    
T  2739683 t 2739683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 105; Significance: 3e-52; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 2474008 - 2474124
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  2474008 catggttgaaggaaggcttataagaattgtttggtactgcctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 2474107  T
Q  115 gcgtgcttgacttggag 131  Q
    |||||||||||||||||    
T  2474108 gcgtgcttgacttggag 2474124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 2474454 - 2474570
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  2474454 catggttgaaggaagacttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 2474553  T
Q  115 gcgtgcttgacttggag 131  Q
    |||||||||||||||||    
T  2474554 gcgtgcttgacttggag 2474570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 8 - 131
Target Start/End: Original strand, 2193858 - 2193981
Alignment:
Q  8 gggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactcca 107  Q
    ||||| |||||||||||||||| ||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  2193858 gggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactcca 2193957  T
Q  108 cagttaagcgtgcttgacttggag 131  Q
    ||||||||||||||||||||||||    
T  2193958 cagttaagcgtgcttgacttggag 2193981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 8 - 131
Target Start/End: Complemental strand, 42788750 - 42788627
Alignment:
Q  8 gggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactcca 107  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||| ||||||||||    
T  42788750 gggactacatggttgaaagaagacttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccacaagaactcca 42788651  T
Q  108 cagttaagcgtgcttgacttggag 131  Q
    ||||||||||||||||||||||||    
T  42788650 cagttaagcgtgcttgacttggag 42788627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 8642131 - 8642015
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||| |||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  8642131 catggttgaaggaaggcttataagaattatttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 8642032  T
Q  115 gcgtgcttgacttggag 131  Q
    |||||||||||||||||    
T  8642031 gcgtgcttgacttggag 8642015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 10927501 - 10927381
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagtta 113  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  10927501 acatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagcccattccataagaactccacagtta 10927402  T
Q  114 agcgtgcttgacttggagtag 134  Q
    | |||||||||||||||||||    
T  10927401 aacgtgcttgacttggagtag 10927381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 15 - 171
Target Start/End: Original strand, 1821955 - 1822107
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||| |||||||||||||||||||| ||||    
T  1821955 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagcccattccataagaactccacatttaa 1822054  T
Q  115 gcgtgcttgacttggagtagctagtctttggatggatggccttctgagaagtttccc 171  Q
    ||||||||||||||||||||    ||||||||||| || ||| | | ||||||||||    
T  1822055 gcgtgcttgacttggagtag----tctttggatgggtgacctaccgggaagtttccc 1822107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 8 - 131
Target Start/End: Complemental strand, 17445559 - 17445436
Alignment:
Q  8 gggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactcca 107  Q
    ||||| |||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||| ||||||||||||| ||||    
T  17445559 gggactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttatcggtagctcattccataagaaatcca 17445460  T
Q  108 cagttaagcgtgcttgacttggag 131  Q
    ||||||||||||||||||||||||    
T  17445459 cagttaagcgtgcttgacttggag 17445436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 189117 - 189233
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  189117 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgtatcttcttttcggtagctcattccataagaactccacagttaa 189216  T
Q  115 gcgtgcttgacttggag 131  Q
    || ||||||||||||||    
T  189217 gcatgcttgacttggag 189233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 8 - 131
Target Start/End: Original strand, 34372110 - 34372233
Alignment:
Q  8 gggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactcca 107  Q
    ||||| |||||||||||||||  |||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||| ||    
T  34372110 gggactacatggttgaaggaatgcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaacttca 34372209  T
Q  108 cagttaagcgtgcttgacttggag 131  Q
    ||||||||||||||||||||||||    
T  34372210 cagttaagcgtgcttgacttggag 34372233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 8 - 134
Target Start/End: Complemental strand, 10927050 - 10926924
Alignment:
Q  8 gggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactcca 107  Q
    ||||| |||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||| ||| |||||  ||||||||||||||||||    
T  10927050 gggactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttccttttggtagtccattccataagaactcca 10926951  T
Q  108 cagttaagcgtgcttgacttggagtag 134  Q
    ||||||| |||||||||||||||||||    
T  10926950 cagttaaacgtgcttgacttggagtag 10926924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 14 - 181
Target Start/End: Complemental strand, 27646933 - 27646770
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagtta 113  Q
    |||||||||||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||||||| |||||| |||| |||||||||||||||||||    
T  27646933 acatggttgaaggaaggcttataagaattgtttggtactacctataacaacaagatgcatcttctttttggtagcccatttcataagaactccacagtta 27646834  T
Q  114 agcgtgcttgacttggagtagctagtctttggatggatggccttctgagaagtttcccaaaaaacgtg 181  Q
    |||||||||| |||||||    ||||||||| |||| || ||| | | |||||||||||| |||||||    
T  27646833 agcgtgcttgtcttggag----tagtctttgcatgggtgacctaccgggaagtttcccaataaacgtg 27646770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 8 - 134
Target Start/End: Original strand, 39146981 - 39147107
Alignment:
Q  8 gggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactcca 107  Q
    ||||| ||||||||||||| |||||||||||||||||||| |||| | ||||| || ||||||||||||||||| |||||| ||||||||||||||||||    
T  39146981 gggactacatggttgaaggtagacttataagaattgtttgatactacttatattaacaagatgcatcttctttttggtagcccattccataagaactcca 39147080  T
Q  108 cagttaagcgtgcttgacttggagtag 134  Q
    |||||||||||||||||||||||||||    
T  39147081 cagttaagcgtgcttgacttggagtag 39147107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 3887154 - 3887038
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    |||||||||||||||||||||| ||||| ||||||||| |||||||||| |||||||||||||||||||||| | ||||||||||||||| |||||||||    
T  3887154 catggttgaaggaagacttatatgaattatttggtactacctatatcaacaagatgcatcttcttttcggtaactcattccataagaacttcacagttaa 3887055  T
Q  115 gcgtgcttgacttggag 131  Q
    |||||||||||||||||    
T  3887054 gcgtgcttgacttggag 3887038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 21886243 - 21886127
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||| |||||||||||||||||||||| | |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  21886243 catggttgaaggaaggcttataagaattgtttggtactacatatatcaacaagatgcatcttcttttcggtagctcattccataagaactccaaagttaa 21886144  T
Q  115 gcgtgcttgacttggag 131  Q
    | |||||||||||||||    
T  21886143 gtgtgcttgacttggag 21886127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 34371661 - 34371777
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||  |||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  34371661 catggttgaaggaatgcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaacaccacagttaa 34371760  T
Q  115 gcgtgcttgacttggag 131  Q
    |||||||||||||||||    
T  34371761 gcgtgcttgacttggag 34371777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 8391419 - 8391303
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagtta 113  Q
    ||||| ||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||||||  ||||||||||||||||| |||||    
T  8391419 acatgattgaaggaagacttataagaattgtttggtact-cctgtatcaacaagatgcatcttcttttcggtagctaattccataagaactccatagtta 8391321  T
Q  114 agcgtgcttgacttggag 131  Q
    ||||||||||||||||||    
T  8391320 agcgtgcttgacttggag 8391303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 34867839 - 34867951
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||| ||||||||||||| ||||||    
T  34867839 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcatttcataagaactccatagttaa 34867938  T
Q  115 gcgtgcttgactt 127  Q
    |||||||| ||||    
T  34867939 gcgtgcttaactt 34867951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 3886698 - 3886582
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    |||||| |||||||  |||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  3886698 catggtagaaggaatgcttatatgaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 3886599  T
Q  115 gcgtgcttgacttggag 131  Q
    ||||| ||||| |||||    
T  3886598 gcgtgtttgacgtggag 3886582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 9 - 134
Target Start/End: Complemental strand, 20039577 - 20039453
Alignment:
Q  9 ggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccac 108  Q
    |||| |||| ||||||||||| |||||||||||||||||||||| |||||||||| ||||||||| ||||||| |||||| |||||||||||||||| ||    
T  20039577 ggactacatagttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcattttctttt-ggtagcccattccataagaactctac 20039479  T
Q  109 agttaagcgtgcttgacttggagtag 134  Q
    ||||||| ||||||||||| ||||||    
T  20039478 agttaagtgtgcttgacttagagtag 20039453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 22556585 - 22556701
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||| |||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||  |||||||| |||||||||    
T  22556585 catggttgaaggaaggcttatatgaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattctttaagaacttcacagttaa 22556684  T
Q  115 gcgtgcttgacttggag 131  Q
    |||||  ||||||||||    
T  22556685 gcgtggctgacttggag 22556701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 22557018 - 22557134
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||| |||||| ||||||||||||||| || ||||||| |||||||||||||||||||||||| |||||  |||||||| |||||||||    
T  22557018 catggttgaaggaaggcttatatgaattgtttggtactaccaatatcaacaagatgcatcttcttttcggtagctcattctttaagaacttcacagttaa 22557117  T
Q  115 gcgtgcttgacttggag 131  Q
    |||||| ||||||||||    
T  22557118 gcgtgcctgacttggag 22557134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 8 - 171
Target Start/End: Complemental strand, 29680204 - 29680052
Alignment:
Q  8 gggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactcca 107  Q
    ||||| |||||||||||||||| ||||||||       ||||| | |||||||||| ||||||||||||||||| |||||| |||| |||||||||||||    
T  29680204 gggactacatggttgaaggaaggcttataag-------tggtaatacctatatcaacaagatgcatcttctttttggtagcccattacataagaactcca 29680112  T
Q  108 cagttaagcgtgcttgacttggagtagctagtctttggatggatggccttctgagaagtttccc 171  Q
    |||||||||||| |||||||||||    |||||||||||||| || ||||| ||||||||||||    
T  29680111 cagttaagcgtgtttgacttggag----tagtctttggatgggtgaccttccgagaagtttccc 29680052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 18750293 - 18750177
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    |||||||||||||||  |||||| |||||||||||||| |||||| ||| ||||||||||||||||||||||||  ||||||||||||||||| | ||||    
T  18750293 catggttgaaggaaggattataacaattgtttggtactacctataccaaaaagatgcatcttcttttcggtagcttattccataagaactccataattaa 18750194  T
Q  115 gcgtgcttgacttggag 131  Q
     ||| ||||||||||||    
T  18750193 tcgtacttgacttggag 18750177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 39 - 131
Target Start/End: Original strand, 18304504 - 18304596
Alignment:
Q  39 aattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgtgcttgacttggag 131  Q
    |||||||||||||| |||||||||| ||||||||| |||||||||||||| ||||||||||||| ||||||||||||| || |||||||||||    
T  18304504 aattgtttggtactacctatatcaacaagatgcatattcttttcggtagctcattccataagaattccacagttaagcatgtttgacttggag 18304596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 8 - 128
Target Start/End: Complemental strand, 15513117 - 15512996
Alignment:
Q  8 gggacaacatggttgaaggaaga--cttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactc 105  Q
    ||||| ||||||||||||||| |  ||||||||||||||| |||||| || ||||||| ||||||||||||||||| |||| | ||||||||||||||||    
T  15513117 gggactacatggttgaaggaatatgcttataagaattgtt-ggtactaccaatatcaacaagatgcatcttctttttggtatctcattccataagaactc 15513019  T
Q  106 cacagttaagcgtgcttgacttg 128  Q
    |||| |||| |||||||||||||    
T  15513018 cacaattaaacgtgcttgacttg 15512996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 20 - 131
Target Start/End: Complemental strand, 20858633 - 20858522
Alignment:
Q  20 ttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgtg 119  Q
    |||||| ||| |||||||||||||||||||| |  ||||||||| ||||||| |||||||||| ||||| |||||||||||||||||| |||||||  ||    
T  20858633 ttgaagaaaggcttataagaattgtttggtattttctatatcaacaagatgcttcttcttttctgtagctcattccataagaactccatagttaaggttg 20858534  T
Q  120 cttgacttggag 131  Q
    ||||||||||||    
T  20858533 cttgacttggag 20858522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 8 - 131
Target Start/End: Complemental strand, 30719909 - 30719786
Alignment:
Q  8 gggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactcca 107  Q
    |||||| ||| ||||||||||| |||||| ||||||||||||||| ||||||  || |||||||||||||||||||||||  ||  ||||||||||||||    
T  30719909 gggacatcattgttgaaggaaggcttatatgaattgtttggtactacctataaaaacaagatgcatcttcttttcggtaggtcaaaccataagaactcca 30719810  T
Q  108 cagttaagcgtgcttgacttggag 131  Q
    || |||||||||||  ||||||||    
T  30719809 caattaagcgtgctcaacttggag 30719786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 14 - 127
Target Start/End: Original strand, 42429193 - 42429306
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagtta 113  Q
    |||||||||||||| |||||||||||||||||||||||| ||| |||||| || |||||| |||||||| ||||| | || |||||||||| || |||||    
T  42429193 acatggttgaaggaggacttataagaattgtttggtactacctttatcaacaatatgcatattcttttccgtagcccgttacataagaacttcatagtta 42429292  T
Q  114 agcgtgcttgactt 127  Q
    || |||||||||||    
T  42429293 agggtgcttgactt 42429306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 30684649 - 30684537
Alignment:
Q  19 gttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgt 118  Q
    |||||||| || |||||| |||||||||||||||  |||||  || |||||||||||||||||||||||  ||  |||||||||||||||||||||||||    
T  30684649 gttgaagggaggcttatatgaattgtttggtactatctataaaaacaagatgcatcttcttttcggtaggtcaaaccataagaactccacagttaagcgt 30684550  T
Q  119 gcttgacttggag 131  Q
    |||  ||||||||    
T  30684549 gctcaacttggag 30684537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 46 - 127
Target Start/End: Complemental strand, 11757347 - 11757266
Alignment:
Q  46 tggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgtgcttgactt 127  Q
    ||||||| | |||||||| || ||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||    
T  11757347 tggtactacttatatcaacaaaatgcatcttcttttcggtagttcaatccataagaactccacagttaagcgtgcttgactt 11757266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 14 - 117
Target Start/End: Complemental strand, 4673569 - 4673466
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagtta 113  Q
    ||||| |||||||||| |||||||||||| |||||||   ||| |||||| ||||||||| ||||||| ||||   ||||||||||||||||||||||||    
T  4673569 acatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagtta 4673470  T
Q  114 agcg 117  Q
    ||||    
T  4673469 agcg 4673466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 24182341 - 24182227
Alignment:
Q  16 atggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaag 115  Q
    |||||||||||||| |||||||||||| |||||||||  ||||| ||| ||||||||||||| |||||||| | ||  |||||| ||||  |||||||||    
T  24182341 atggttgaaggaaggcttataagaattatttggtactatctataccaacaagatgcatcttc-tttcggtaccccaaaccataataacttaacagttaag 24182243  T
Q  116 cgtgcttgacttggag 131  Q
    |||| |||||||||||    
T  24182242 cgtggttgacttggag 24182227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 2058748 - 2058664
Alignment:
Q  20 ttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaact 104  Q
    ||||||||||||||||| ||||||||||||||| |||||||||| ||||||||  |||| ||   ||||||||||||||||||||    
T  2058748 ttgaaggaagacttatatgaattgtttggtactacctatatcaacaagatgcaaattctgttaaatagcacattccataagaact 2058664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 23 - 134
Target Start/End: Complemental strand, 5066980 - 5066869
Alignment:
Q  23 aaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgtgctt 122  Q
    |||||| ||||||||||||||||||||| |  ||||||||| ||||||||| ||||||| |||||   ||| ||||| ||||||||| |||| |||| ||    
T  5066980 aaggaaaacttataagaattgtttggtattatctatatcaacaagatgcattttctttttggtagtctatttcataaaaactccacaattaaacgtgttt 5066881  T
Q  123 gacttggagtag 134  Q
    | ||||||||||    
T  5066880 gccttggagtag 5066869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 113
Target Start/End: Complemental strand, 4658089 - 4657992
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagtta 113  Q
    |||||||||| ||||| |||||||| ||||||| |||| |||||| ||| || |||||||||||||| |||||  ||||||||||||||| ||||||||    
T  4658089 catggttgaacgaaga-ttataagacttgtttgatactacctataacaacaacatgcatcttctttttggtagtccattccataagaacttcacagtta 4657992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 16370805 - 16370732
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagc 88  Q
    |||||||||||||| ||||||||||||||||||||||| | |||||||| |||| | |||||||||| ||||||    
T  16370805 catggttgaaggaaaacttataagaattgtttggtactacttatatcaacaagacgtatcttctttttggtagc 16370732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 26 - 131
Target Start/End: Complemental strand, 32574744 - 32574639
Alignment:
Q  26 gaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgtgcttgac 125  Q
    |||| |||||| ||||||||||||||| ||||||  || || |||||||||  ||| |||||| ||  | |||| |||| || |||||||||||||||||    
T  32574744 gaaggcttataggaattgtttggtactacctatacaaacaaaatgcatctttcttttggtagcccaaactataataacttcatagttaagcgtgcttgac 32574645  T
Q  126 ttggag 131  Q
    ||||||    
T  32574644 ttggag 32574639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 11160779 - 11160713
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttt 80  Q
    |||| ||||||||||| ||||||| ||||||||||||||  |||| |||| ||||||||| ||||||    
T  11160779 acatagttgaaggaaggcttataataattgtttggtactatctatgtcaacaagatgcatattcttt 11160713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 78 - 131
Target Start/End: Original strand, 4102908 - 4102961
Alignment:
Q  78 ttttcggtagcacattccataagaactccacagttaagcgtgcttgacttggag 131  Q
    ||||||||||| ||  ||||||||||| ||||||||| ||||||||||||||||    
T  4102908 ttttcggtagcccaaaccataagaacttcacagttaaacgtgcttgacttggag 4102961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 5785954 - 5785901
Alignment:
Q  66 agatgcatcttcttttcggtagcacattccataagaactccacagttaagcgtg 119  Q
    ||||||||| |||||| |||||| | |||| |||||||||||||||||||||||    
T  5785954 agatgcatcatctttttggtagctcgttccgtaagaactccacagttaagcgtg 5785901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 179 - 221
Target Start/End: Complemental strand, 17445348 - 17445306
Alignment:
Q  179 gtggagtcagtcgacaatcctaaaagtcgtctgagatgttaca 221  Q
    |||| |||||||||||||||||||||||| ||| |||||||||    
T  17445348 gtggggtcagtcgacaatcctaaaagtcgcctgggatgttaca 17445306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 43356708 - 43356651
Alignment:
Q  24 aggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctttt 81  Q
    |||| |||||||||||||||||||||||  |||| | ||| || ||||||||||||||    
T  43356708 aggatgacttataagaattgtttggtacaacctaaaccaacaatatgcatcttctttt 43356651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 131
Target Start/End: Original strand, 5785958 - 5786010
Alignment:
Q  79 tttcggtagcacattccataagaactccacagttaagcgtgcttgacttggag 131  Q
    ||||| |||| |||||||||||||||| ||  ||||||||| |||||||||||    
T  5785958 tttcgatagcccattccataagaactctacgcttaagcgtgtttgacttggag 5786010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 103; Significance: 5e-51; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 8 - 134
Target Start/End: Complemental strand, 1645847 - 1645721
Alignment:
Q  8 gggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactcca 107  Q
    ||||| ||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||| |||||| ||||||||||||||||||    
T  1645847 gggactacatggttgaaggaagacttataagaattgtttggtattacctatatcaacaagatgcatcttctttttggtagcccattccataagaactcca 1645748  T
Q  108 cagttaagcgtgcttgacttggagtag 134  Q
    |||||||||||||||||||||||||||    
T  1645747 cagttaagcgtgcttgacttggagtag 1645721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 44471417 - 44471300
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagtta 113  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  44471417 acatggttgaaggaagacttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagtta 44471318  T
Q  114 agcgtgcttgacttggag 131  Q
    ||||||||||| ||||||    
T  44471317 agcgtgcttgatttggag 44471300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 12692090 - 12691974
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  12692090 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 12691991  T
Q  115 gcgtgcttgacttggag 131  Q
    |||||||||||||||||    
T  12691990 gcgtgcttgacttggag 12691974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 49998685 - 49998801
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  49998685 catggttgaaggaagacttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 49998784  T
Q  115 gcgtgcttgacttggag 131  Q
    ||||| |||||||||||    
T  49998785 gcgtgtttgacttggag 49998801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 9 - 133
Target Start/End: Complemental strand, 50398635 - 50398511
Alignment:
Q  9 ggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccac 108  Q
    |||| |||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||     
T  50398635 ggactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccat 50398536  T
Q  109 agttaagcgtgcttgacttggagta 133  Q
    |||||||||||||||||||||||||    
T  50398535 agttaagcgtgcttgacttggagta 50398511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 14 - 152
Target Start/End: Complemental strand, 23942881 - 23942747
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagtta 113  Q
    |||||||||||||||  |||||||||||||||||||||| |||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||    
T  23942881 acatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttttgtagcacattccataagaactccacagtta 23942782  T
Q  114 agcgtgcttgacttggagtagctagtctttggatggatg 152  Q
    ||||||||||||||||||    |||||||||||||||||    
T  23942781 agcgtgcttgacttggag----tagtctttggatggatg 23942747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 23943334 - 23943214
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagtta 113  Q
    |||||||||||||||||||||||| || | ||||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  23943334 acatggttgaaggaagacttataaaaaatatttggtactacctatatcaacaagatgcatcttctttttggtagcacattccataagaactccacagtta 23943235  T
Q  114 agcgtgcttgacttggagtag 134  Q
    |||||||||||||||||||||    
T  23943234 agcgtgcttgacttggagtag 23943214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 14 - 133
Target Start/End: Complemental strand, 50399085 - 50398966
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagtta 113  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||    
T  50399085 acatggttgaaggaaggcttataagaattgtttggtactacctatatcaacacgatgcatcttcttttcggtagctcattccataagaactccacagtta 50398986  T
Q  114 agcgtgcttgacttggagta 133  Q
    |||||| |||||||||||||    
T  50398985 agcgtgtttgacttggagta 50398966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 8 - 133
Target Start/End: Complemental strand, 51331379 - 51331254
Alignment:
Q  8 gggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactcca 107  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||  ||||||||| ||||| |||||||||||||||||| |||| |||||||||||||    
T  51331379 gggactacatggttgaaggaaggcttataagaattgtttggtactatctatatcaacaagatacatcttcttttcggtagctcatttcataagaactcca 51331280  T
Q  108 cagttaagcgtgcttgacttggagta 133  Q
    ||||||||||||||||||||||||||    
T  51331279 cagttaagcgtgcttgacttggagta 51331254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 8 - 134
Target Start/End: Original strand, 3169248 - 3169374
Alignment:
Q  8 gggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactcca 107  Q
    ||||| |||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||| |||| | || |||||||||||||||    
T  3169248 gggactacatggttgaaggaagacttataaaaattgtttggtactacctatatcaacaagatgcatcttctttttggtaacccaatccataagaactcca 3169347  T
Q  108 cagttaagcgtgcttgacttggagtag 134  Q
    || ||||||||||||||||||||||||    
T  3169348 cacttaagcgtgcttgacttggagtag 3169374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 7678714 - 7678597
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagtta 113  Q
    |||||||||||||||| ||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||    
T  7678714 acatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagcttattccataagaactccacagtta 7678615  T
Q  114 agcgtgcttgacttggag 131  Q
    || |||||||||||||||    
T  7678614 agtgtgcttgacttggag 7678597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 23350374 - 23350258
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| | ||||||||||||| || ||||||    
T  23350374 catggttgaaggaaggcttataagaattgtttggtacttcctatatcaacaagatgcatcttcttttcggtagctccttccataagaacttcatagttaa 23350275  T
Q  115 gcgtgcttgacttggag 131  Q
    |||||||||||||||||    
T  23350274 gcgtgcttgacttggag 23350258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 8 - 112
Target Start/End: Complemental strand, 4127535 - 4127431
Alignment:
Q  8 gggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactcca 107  Q
    ||||| |||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  4127535 gggactacatagttgaaggaagacttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactcca 4127436  T
Q  108 cagtt 112  Q
    |||||    
T  4127435 cagtt 4127431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 35871677 - 35871792
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||| |||||| ||||||||||||||  |||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  35871677 catggttgaaggaaggcttatatgaattgtttggtaccacctatatcaacaagatgcat-ttcttttcggtagctcattccataagaactccacagttaa 35871775  T
Q  115 gcgtgcttgacttggag 131  Q
    |||||||||||||||||    
T  35871776 gcgtgcttgacttggag 35871792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 32 - 131
Target Start/End: Complemental strand, 50814899 - 50814800
Alignment:
Q  32 ttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgtgcttgacttggag 131  Q
    |||||||||||||||||||||  ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  50814899 ttataagaattgtttggtactatctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggag 50814800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 8 - 134
Target Start/End: Complemental strand, 53996213 - 53996087
Alignment:
Q  8 gggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactcca 107  Q
    ||||| |||||||||||||||  ||||||| |||||||||||||| |||||||||| ||||| ||||||||||| |||| | ||||||||||||||||||    
T  53996213 gggactacatggttgaaggaatgcttataaaaattgtttggtactacctatatcaacaagattcatcttctttttggtatctcattccataagaactcca 53996114  T
Q  108 cagttaagcgtgcttgacttggagtag 134  Q
    |||||||| ||||||||||||||||||    
T  53996113 cagttaagtgtgcttgacttggagtag 53996087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 31 - 131
Target Start/End: Complemental strand, 24629052 - 24628952
Alignment:
Q  31 cttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgtgcttgacttgga 130  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||    
T  24629052 cttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcagtagctcgttccataagaactccacagttaagcgtgcttgacttgga 24628953  T
Q  131 g 131  Q
    |    
T  24628952 g 24628952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 24629524 - 24629408
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||| ||||||  |||||||||||||||||||||| |||||||||| |||||||||||||||||||||| | | ||||||||||| |||||||||||    
T  24629524 catggttaaaggaatgcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtacctcgttccataagaattccacagttaa 24629425  T
Q  115 gcgtgcttgacttggag 131  Q
    |||||||||||||||||    
T  24629424 gcgtgcttgacttggag 24629408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 29628759 - 29628640
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagtta 113  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||  |||| | || |||||| ||||||||||||||||||||||||    
T  29628759 acatggttgaaggaagacttataagaattgtttggtactacctatatcaacaagatgtgtctt-tgtttggtagcccattccataagaactccacagtta 29628661  T
Q  114 agcgtgcttgacttggagtag 134  Q
    |||||| ||||||||||||||    
T  29628660 agcgtgtttgacttggagtag 29628640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 4127979 - 4127872
Alignment:
Q  16 atggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaag 115  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||  |||||||||||||| || |||||||    
T  4127979 atggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagccaattccataagaacttcagagttaag 4127880  T
Q  116 cgtgcttg 123  Q
    ||||||||    
T  4127879 cgtgcttg 4127872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 27029331 - 27029434
Alignment:
Q  20 ttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgtg 119  Q
    ||||||||||||||||||||||| ||||||||| | |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  27029331 ttgaaggaagacttataagaattatttggtactacttatatcaacaagatgcatcttcttttcggtagcccattccataagaactccacagttaagtgtg 27029430  T
Q  120 cttg 123  Q
    ||||    
T  27029431 cttg 27029434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 44470964 - 44470850
Alignment:
Q  16 atggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaag 115  Q
    ||||||||| |||| |||||||||||||||||||||| |||||||||| |||||||||||||| ||| ||| | ||||||||||||||||||||||||||    
T  44470964 atggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctgttc-gtaactcattccataagaactccacagttaag 44470866  T
Q  116 cgtgcttgacttggag 131  Q
    ||||||||||||||||    
T  44470865 cgtgcttgacttggag 44470850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 14 - 181
Target Start/End: Original strand, 1464195 - 1464358
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagtta 113  Q
    |||| |||||| ||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||| |||||||||| |||| ||     
T  1464195 acatagttgaaagaaaacttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcatttcataagaacttcacaattt 1464294  T
Q  114 agcgtgcttgacttggagtagctagtctttggatggatggccttctgagaagtttcccaaaaaacgtg 181  Q
    ||||||||| ||||||||     | | || |||||| || ||||||||||||||| ||||||||||||    
T  1464295 agcgtgcttaacttggag----caattttgggatgggtgaccttctgagaagttttccaaaaaacgtg 1464358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 21220421 - 21220306
Alignment:
Q  16 atggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaag 115  Q
    |||||||||||||  |||||||||||||||||||||| |||||||||| ||||||||||||||||| |||| | ||||| ||||||||| ||||||||||    
T  21220421 atggttgaaggaatgcttataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtaactcattctataagaactacacagttaag 21220322  T
Q  116 cgtgcttgacttggag 131  Q
    |||| |||||||||||    
T  21220321 cgtgtttgacttggag 21220306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 31817943 - 31817824
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||| ||||||||||||||| |||||| |||||| ||| |||||||||||||||||||||||  |||| |||||||||| || ||||||    
T  31817943 catggttgaaggaaggcttataagaattgttcggtactacctataccaacaagatgcatcttcttttcggtagtccatttcataagaacttcatagttaa 31817844  T
Q  115 gcgtgcttgacttggagtag 134  Q
    |||||||||||||| |||||    
T  31817843 gcgtgcttgacttgtagtag 31817824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 8467892 - 8467783
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagtta 113  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||| |        |||||||||||||||    
T  8467892 acatggttgaaggaagacttataagaattgtttggtactacctataccaacaagatgcatcttcttttcggtagccc--------agaactccacagtta 8467801  T
Q  114 agcgtgcttgacttggag 131  Q
    ||||||||||||||||||    
T  8467800 agcgtgcttgacttggag 8467783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 15 - 168
Target Start/End: Complemental strand, 13613988 - 13613840
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    |||||| ||||||  |||||||||||||||||| |||  |||||||||| ||||||||||||| |||||||||  ||||| |||||||||||||||||||    
T  13613988 catggtagaaggagtacttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagttcattctataagaactccacagttaa 13613890  T
Q  115 gcgtgcttgacttggagtagctagtctttggatggatggccttctgagaagttt 168  Q
    ||||| ||||||||||    ||||||||||||||| || | |||||||||||||    
T  13613889 gcgtgtttgacttgga----ctagtctttggatgggtgacgttctgagaagttt 13613840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 21067331 - 21067450
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    |||||||||||||||||| |||| |||| ||||||||| | |||||||| |||||||||||||||| ||||||| ||||| | ||| |||||||| ||||    
T  21067331 catggttgaaggaagactaataataattatttggtactacatatatcaacaagatgcatcttctttccggtagctcattctaaaagtactccacaattaa 21067430  T
Q  115 gcgtgcttgacttggagtag 134  Q
    ||||||||||||||||||||    
T  21067431 gcgtgcttgacttggagtag 21067450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 14571812 - 14571702
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    |||||||||||| |  |||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||  |  |||||||||||||||||||||    
T  14571812 catggttgaagggatgcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcagtagcctaaaccataagaactccacagttaa 14571713  T
Q  115 gcgtgcttgac 125  Q
    |||||||||||    
T  14571712 gcgtgcttgac 14571702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 8 - 127
Target Start/End: Complemental strand, 15306195 - 15306070
Alignment:
Q  8 gggacaacatggttgaaggaagacttataagaattg------tttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataaga 101  Q
    ||||| ||||||| ||| |||||||||||||| |||      ||||||||| ||||||| || |||||||||||||||||||||||| ||||||||||||    
T  15306195 gggactacatggtcgaaagaagacttataagatttgagcaattttggtactacctatataaacaagatgcatcttcttttcggtagctcattccataaga 15306096  T
Q  102 actccacagttaagcgtgcttgactt 127  Q
    ||||||||||||||||||||||||||    
T  15306095 actccacagttaagcgtgcttgactt 15306070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 15 - 152
Target Start/End: Original strand, 14351844 - 14351977
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||| ||| ||||| || |||||||||  ||||||||| ||||||||||||||||| |||| |  ||||||||||||||||||||||||    
T  14351844 catggttgaaggaaggcttgtaagagttttttggtactatctatatcaacaagatgcatcttctttttggtatcctattccataagaactccacagttaa 14351943  T
Q  115 gcgtgcttgacttggagtagctagtctttggatggatg 152  Q
    ||||| ||||||| |||    |||||||||||||||||    
T  14351944 gcgtgtttgacttcgag----tagtctttggatggatg 14351977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 17628560 - 17628676
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    |||||||||||| || |||||||||||||||||||||| |||||| ||| ||||||||||||||||||| |||| ||  ||||||||| ||||||||| |    
T  17628560 catggttgaaggtaggcttataagaattgtttggtactacctataccaacaagatgcatcttcttttcgatagcccaacccataagaattccacagttga 17628659  T
Q  115 gcgtgcttgacttggag 131  Q
    |||||| ||||||||||    
T  17628660 gcgtgcctgacttggag 17628676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 21067783 - 21067899
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||| ||||| ||   | |||| |||||  ||||||||||||||| |||||||||    
T  21067783 catggttgaaggaagacttataagaattgtttggtgctacctatatcaacaagataca---tttttttggtagtccattccataagaacttcacagttaa 21067879  T
Q  115 gcgtgcttgacttggagtag 134  Q
    |||||||||||||| |||||    
T  21067880 gcgtgcttgacttgaagtag 21067899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 13266135 - 13266247
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||| ||||||| |||| ||| ||||| ||||||||||||||||||||||| ||||||||||| ||   || |||||| ||||||||||    
T  13266135 catggttgaaggaaggcttataataattttttagtactccctatatcaataagatgcatcttattttcggtagcccaaatcacaagaaccccacagttaa 13266234  T
Q  115 gcgtgcttgactt 127  Q
    |||||||||||||    
T  13266235 gcgtgcttgactt 13266247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 27026557 - 27026664
Alignment:
Q  20 ttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgtg 119  Q
    |||||||||| ||||||||||||||||| |||| |||||||||| |||||||||||| |||| |||||| ||||||||||||||| |  |||||||||||    
T  27026557 ttgaaggaaggcttataagaattgtttgatactacctatatcaacaagatgcatctt-tttttggtagcccattccataagaactacgtagttaagcgtg 27026655  T
Q  120 cttgacttg 128  Q
    |||||||||    
T  27026656 cttgacttg 27026664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 9423949 - 9423830
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    |||||||||| |||| ||||||| |||||||||||||| |||||||||| ||||||||||||||||   ||||| ||||||||||||| | |||| ||||    
T  9423949 catggttgaaagaaggcttataataattgtttggtactacctatatcaacaagatgcatcttctttctagtagcccattccataagaatttcacaattaa 9423850  T
Q  115 gcgtgcttgacttggagtag 134  Q
    | |||||||| |||||||||    
T  9423849 gtgtgcttgaattggagtag 9423830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 17 - 131
Target Start/End: Complemental strand, 27578998 - 27578884
Alignment:
Q  17 tggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagc 116  Q
    |||||||  ||||||||||||||||||||||||||| | ||||||||| |||  |||||||||||| ||||| |  |||||||||||| |||||||||||    
T  27578998 tggttgactgaagacttataagaattgtttggtactacatatatcaattagacacatcttcttttcagtagccctatccataagaactacacagttaagc 27578899  T
Q  117 gtgcttgacttggag 131  Q
    |||||| ||||||||    
T  27578898 gtgcttaacttggag 27578884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 8 - 127
Target Start/End: Complemental strand, 14572248 - 14572133
Alignment:
Q  8 gggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactcca 107  Q
    ||||| ||||||||||||| || |||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||  |  ||||||||||||||    
T  14572248 gggactacatggttgaagggaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc-tttcggtagcctaaaccataagaactcca 14572150  T
Q  108 cagttaagcgtgcttgactt 127  Q
    ||   |||||||||||||||    
T  14572149 ca---aagcgtgcttgactt 14572133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 32 - 127
Target Start/End: Complemental strand, 27578531 - 27578436
Alignment:
Q  32 ttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgtgcttgactt 127  Q
    ||||||||||| |||||| || |||||||||| |||||||||||||||||||||| | ||  |||||||||||||| |||||||||||||||||||    
T  27578531 ttataagaattatttggtgctacctatatcaacaagatgcatcttcttttcggtatcccaaaccataagaactccatagttaagcgtgcttgactt 27578436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 33764908 - 33765024
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagtta 113  Q
    ||||||||| | |||||||| ||||||||||||||| || |||||| ||| |||||||||||||||||  ||||| ||||  ||||||||| |||| |||    
T  33764908 acatggttggatgaagacttttaagaattgtttggtgctacctataccaacaagatgcatcttcttttttgtagctcattttataagaacttcacactta 33765007  T
Q  114 agcgtgcttgacttgga 130  Q
    ||||||||||| |||||    
T  33765008 agcgtgcttgatttgga 33765024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 15 - 128
Target Start/End: Complemental strand, 31817489 - 31817376
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||   |||||| |||||||||||||| |||||| ||| || ||||||||||||||| | ||| |||||| ||||||||| ||| ||||    
T  31817489 catggttgaaggaacgtttataataattgtttggtactacctataccaacaaaatgcatcttcttttccgcagcccattccttaagaactctacaattaa 31817390  T
Q  115 gcgtgcttgacttg 128  Q
    ||||| ||||||||    
T  31817389 gcgtgtttgacttg 31817376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 4185764 - 4185880
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||| |||||| || ||||||||||||||| |||  | |||| ||| ||||||||||||||||| |||||| ||||| | |||||||| ||||||||    
T  4185764 catggttaaaggaatacatataagaattgtttgataccacatataccaacaagatgcatcttctttttggtagctcattctacaagaactctacagttaa 4185863  T
Q  115 gcgtgcttgacttggag 131  Q
    |  ||||||||||||||    
T  4185864 gtatgcttgacttggag 4185880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 17029383 - 17029495
Alignment:
Q  19 gttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgt 118  Q
    |||||| |||||||| ||| |||||||| ||||| |||||||||| ||||||||| ||  ||| |||| |  ||||||||||||||||||||||||| ||    
T  17029383 gttgaatgaagacttgtaataattgtttagtactacctatatcaacaagatgcatattacttttggtaccttattccataagaactccacagttaagagt 17029482  T
Q  119 gcttgacttggag 131  Q
    |||| ||||||||    
T  17029483 gcttaacttggag 17029495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 26 - 131
Target Start/End: Complemental strand, 20306241 - 20306139
Alignment:
Q  26 gaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgtgcttgac 125  Q
    |||| ||||||||||||||||||||||  ||||||||| ||||||||   |||||| |||| | |||| |||||||||| ||| ||||||||||||||||    
T  20306241 gaaggcttataagaattgtttggtactatctatatcaacaagatgca---tctttttggtatcccatttcataagaactacacggttaagcgtgcttgac 20306145  T
Q  126 ttggag 131  Q
    ||||||    
T  20306144 ttggag 20306139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 16 - 131
Target Start/End: Original strand, 17629018 - 17629132
Alignment:
Q  16 atggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaag 115  Q
    |||||||||  || ||||||||||||||||||||||| ||||||  |||||||||| |||||||||  | ||| || |||| ||||| |||||| |||||    
T  17629018 atggttgaataaaaacttataagaattgtttggtactacctatactaataagatgcctcttctttttagaagcccaatccaaaagaattccaca-ttaag 17629116  T
Q  116 cgtgcttgacttggag 131  Q
    | ||||||||||||||    
T  17629117 catgcttgacttggag 17629132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 33 - 128
Target Start/End: Complemental strand, 23091584 - 23091489
Alignment:
Q  33 tataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgtgcttgacttg 128  Q
    ||||| |||||||||||||| | ||||| || ||||||||||||||||  ||||||  |||| |||| |||||||||||||||| |||||||||||    
T  23091584 tataaaaattgtttggtactacatatattaacaagatgcatcttctttctggtagcttattctataaaaactccacagttaagcatgcttgacttg 23091489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 14 - 127
Target Start/End: Original strand, 42838671 - 42838787
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatctt--cttttcggtagcacattccataagaac-tccacag 110  Q
    |||| ||| ||||||||| ||||| |||||||||||||| |||||||||| || |||||||||   |||||| |||  |||||||||||||| | |||||    
T  42838671 acatagttcaaggaagacgtataaaaattgtttggtactacctatatcaacaaaatgcatctttctttttcgatagttcattccataagaactttcacag 42838770  T
Q  111 ttaagcgtgcttgactt 127  Q
    ||||||||| |||||||    
T  42838771 ttaagcgtgtttgactt 42838787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 17028927 - 17029039
Alignment:
Q  19 gttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgt 118  Q
    ||||||||| || || ||||||||||| ||| || |||||||||| ||||||| |||| ||||   ||||  |||||||||||||| || ||||||| ||    
T  17028927 gttgaaggaggatttgtaagaattgttaggtgctacctatatcaacaagatgcgtcttattttacctagcttattccataagaacttcatagttaagagt 17029026  T
Q  119 gcttgacttggag 131  Q
    |||||||||||||    
T  17029027 gcttgacttggag 17029039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 130
Target Start/End: Complemental strand, 23976310 - 23976194
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttc-ttttcggtagcacattccataagaactccacagtta 113  Q
    |||| ||||||||||| ||||||||||||||||||||| ||||||  || ||||||||||||| ||||   ||||  |   ||||| |||||||||||||    
T  23976310 catgattgaaggaagagttataagaattgtttggtactacctatactaacaagatgcatcttcttttttcatagccaaaatcataaaaactccacagtta 23976211  T
Q  114 agcgtgcttgacttgga 130  Q
    | |||||||||||||||    
T  23976210 aacgtgcttgacttgga 23976194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 15 - 82
Target Start/End: Original strand, 41869967 - 41870034
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttc 82  Q
    |||| ||||||||||||||||||||||||| || |||| |||||||||| |||| |||||||||||||    
T  41869967 catgattgaaggaagacttataagaattgtatgatactacctatatcaacaagacgcatcttcttttc 41870034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 17 - 127
Target Start/End: Complemental strand, 43929052 - 43928943
Alignment:
Q  17 tggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagc 116  Q
    |||| |||||||  |||| ||||||||||||||||| | |||| ||| ||||||||||||||||| |||||   ||| |||||||| |||||| |||| |    
T  43929052 tggtcgaaggaaagcttacaagaattgtttggtactacatataccaacaagatgcatcttctttttggtag-ttatttcataagaaatccacaattaaac 43928954  T
Q  117 gtgcttgactt 127  Q
    |||||||||||    
T  43928953 gtgcttgactt 43928943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 115
Target Start/End: Original strand, 44831045 - 44831146
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagtta 113  Q
    ||||||||||||| |  ||||||| |||||||||||||| |||| |  || |||||| || |||||||||||||| |||| |||| ||||| ||||||||    
T  44831045 acatggttgaagggaagcttataaaaattgtttggtactacctaaactaacaagatgtatattcttttcggtagcccatttcatatgaacttcacagtta 44831144  T
Q  114 ag 115  Q
    ||    
T  44831145 ag 44831146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 31 - 114
Target Start/End: Original strand, 4186232 - 4186315
Alignment:
Q  31 cttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    |||||||||||  ||||||||| |||| || || ||||| ||||||||||| |||||| |||| |||||||||| |||||||||    
T  4186232 cttataagaatgatttggtactacctacatgaacaagattcatcttctttttggtagcccattgcataagaactacacagttaa 4186315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 82 - 131
Target Start/End: Complemental strand, 11828509 - 11828460
Alignment:
Q  82 cggtagcacattccataagaactccacagttaagcgtgcttgacttggag 131  Q
    ||||||| | ||||||||||||||||||||||||||||||| ||||||||    
T  11828509 cggtagctccttccataagaactccacagttaagcgtgctttacttggag 11828460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 94 - 131
Target Start/End: Complemental strand, 14571700 - 14571663
Alignment:
Q  94 ccataagaactccacagttaagcgtgcttgacttggag 131  Q
    ||||||||||||||||||||||||||||||||||||||    
T  14571700 ccataagaactccacagttaagcgtgcttgacttggag 14571663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 52
Target Start/End: Complemental strand, 53854897 - 53854861
Alignment:
Q  16 atggttgaaggaagacttataagaattgtttggtact 52  Q
    |||||||||||||||||||||||||||||||||||||    
T  53854897 atggttgaaggaagacttataagaattgtttggtact 53854861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 105
Target Start/End: Complemental strand, 24271642 - 24271552
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactc 105  Q
    |||||||| ||| ||||| |||||||||| |||| |||| ||||||  || ||||||||| || |||| |||||| ||||||||||||||||    
T  24271642 acatggttaaagtaagacatataagaattatttgatactacctatacgaacaagatgcatatt-ttttgggtagcccattccataagaactc 24271552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 127
Target Start/End: Original strand, 34554472 - 34554590
Alignment:
Q  9 ggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccac 108  Q
    ||||||| || ||||| |||  |||||||||||||||||  ||| |||||| ||  ||||||||| || |||| |||||  ||||||||||||||| ||     
T  34554472 ggacaacttgattgaaagaatgcttataagaattgtttgacactacctataccagcaagatgcattttatttttggtagaccattccataagaacttcat 34554571  T
Q  109 agttaagcgtgcttgactt 127  Q
    |||||| | || |||||||    
T  34554572 agttaaacatgtttgactt 34554590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 78 - 131
Target Start/End: Complemental strand, 27578314 - 27578261
Alignment:
Q  78 ttttcggtagcacattccataagaactccacagttaagcgtgcttgacttggag 131  Q
    ||||||||||| ||  | ||||||||| ||||||||||||||||||||||||||    
T  27578314 ttttcggtagcccaaactataagaacttcacagttaagcgtgcttgacttggag 27578261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 127
Target Start/End: Complemental strand, 33294930 - 33294871
Alignment:
Q  68 atgcatcttcttttcggtagcacattccataagaactccacagttaagcgtgcttgactt 127  Q
    ||||||||||||||  ||||  || ||||||||||||||||||| ||||||||| |||||    
T  33294930 atgcatcttcttttttgtagttcactccataagaactccacagtaaagcgtgctcgactt 33294871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 39902518 - 39902471
Alignment:
Q  41 ttgtttggtactgcctatatcaataagatgcatcttcttttcggtagc 88  Q
    ||||||||||||  ||||||||| ||||||||||||||||||| ||||    
T  39902518 ttgtttggtactatctatatcaacaagatgcatcttcttttcgatagc 39902471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 9882653 - 9882722
Alignment:
Q  10 gacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctttt 81  Q
    ||||| |||||||||| || ||||||||||||  ||||||||| |||||   ||||| ||||||||||||||    
T  9882653 gacaagatggttgaagaaaaacttataagaat--tttggtactacctatcctaataaaatgcatcttctttt 9882722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0499 (Bit Score: 101; Significance: 8e-50; HSPs: 2)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 2148 - 2032
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  2148 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 2049  T
Q  115 gcgtgcttgacttggag 131  Q
    |||||||||||||||||    
T  2048 gcgtgcttgacttggag 2032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0499; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 179 - 221
Target Start/End: Complemental strand, 1944 - 1902
Alignment:
Q  179 gtggagtcagtcgacaatcctaaaagtcgtctgagatgttaca 221  Q
    |||| ||||||||||||||||||||||||| || |||||||||    
T  1944 gtggggtcagtcgacaatcctaaaagtcgtttgggatgttaca 1902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 101; Significance: 8e-50; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 17103130 - 17103246
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||| |||||    
T  17103130 catggttgaaggaagacttataagaattgtttggtactgcctatatcaacaagctgcatcttcttttcggtagctcattccataagaactccacggttaa 17103229  T
Q  115 gcgtgcttgacttggag 131  Q
    |||||||||||||||||    
T  17103230 gcgtgcttgacttggag 17103246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 22549092 - 22548976
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  22549092 catggttgaaggaagacttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataaaaactccacagttaa 22548993  T
Q  115 gcgtgcttgacttggag 131  Q
    |||||||||||||||||    
T  22548992 gcgtgcttgacttggag 22548976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 22026428 - 22026544
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    |||||||||| |||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  22026428 catggttgaatgaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 22026527  T
Q  115 gcgtgcttgacttggag 131  Q
    |||||||||||||||||    
T  22026528 gcgtgcttgacttggag 22026544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 8 - 131
Target Start/End: Complemental strand, 12827358 - 12827235
Alignment:
Q  8 gggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactcca 107  Q
    ||||| || ||||||||||||| ||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  12827358 gggactacttggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactcca 12827259  T
Q  108 cagttaagcgtgcttgacttggag 131  Q
    ||||||||||||||||||||||||    
T  12827258 cagttaagcgtgcttgacttggag 12827235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 6465008 - 6464888
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagtta 113  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||| ||||||| |||||| |||||||||| |||||||||||||    
T  6465008 acatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcattttctttttggtagctcattccataacaactccacagtta 6464909  T
Q  114 agcgtgcttgacttggagtag 134  Q
    |||||||||||||||||||||    
T  6464908 agcgtgcttgacttggagtag 6464888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 22548646 - 22548530
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    |||||||||||||||  ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  22548646 catggttgaaggaagttttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataataactccacagttaa 22548547  T
Q  115 gcgtgcttgacttggag 131  Q
    |||||||||||||||||    
T  22548546 gcgtgcttgacttggag 22548530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 27925948 - 27926064
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    |||||||||||||||  ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  27925948 catggttgaaggaaggattataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcatttcataagaactccacagttaa 27926047  T
Q  115 gcgtgcttgacttggag 131  Q
    |||||||||||||||||    
T  27926048 gcgtgcttgacttggag 27926064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 41659202 - 41659086
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||| |||| ||||||||||||||||||||    
T  41659202 catggttgaaggaagacttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcgatagctcattacataagaactccacagttaa 41659103  T
Q  115 gcgtgcttgacttggag 131  Q
    ||||| |||||||||||    
T  41659102 gcgtgtttgacttggag 41659086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 15 - 126
Target Start/End: Original strand, 10844932 - 10845043
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||  |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  10844932 catggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 10845031  T
Q  115 gcgtgcttgact 126  Q
    ||||||||||||    
T  10845032 gcgtgcttgact 10845043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 15 - 128
Target Start/End: Complemental strand, 10844712 - 10844599
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||| ||||||||| |||||||||||| ||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  10844712 catggttgaaggaaggcttataagagttgtttggtactacctatattaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 10844613  T
Q  115 gcgtgcttgacttg 128  Q
    ||||||||||||||    
T  10844612 gcgtgcttgacttg 10844599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 14 - 134
Target Start/End: Original strand, 2044106 - 2044226
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagtta 113  Q
    |||||||||||||||| ||||||||||||||||| |||| |||||||||| ||||||||| ||||||| |||||| |||||||||| |||||||||||||    
T  2044106 acatggttgaaggaaggcttataagaattgtttgatactacctatatcaacaagatgcattttctttttggtagcccattccataataactccacagtta 2044205  T
Q  114 agcgtgcttgacttggagtag 134  Q
    |||||||||||||||||||||    
T  2044206 agcgtgcttgacttggagtag 2044226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 25144821 - 25144937
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    |||| ||||||| || |||||||||||||||||||||| |||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  25144821 catgattgaaggcaggcttataagaattgtttggtactacctatatcagcaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 25144920  T
Q  115 gcgtgcttgacttggag 131  Q
    |||||||||||||||||    
T  25144921 gcgtgcttgacttggag 25144937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 25147585 - 25147701
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||| ||||||||||||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  25147585 catggttgaaggaaggcttataagaattgtttggtgctacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccatagttaa 25147684  T
Q  115 gcgtgcttgacttggag 131  Q
     ||||||||||||||||    
T  25147685 tcgtgcttgacttggag 25147701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 8 - 131
Target Start/End: Complemental strand, 27022442 - 27022319
Alignment:
Q  8 gggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactcca 107  Q
    ||||| ||||||||||| |||| |||||||||||||||||||||| |||||||||| || ||||||||| ||||||| ||| ||||||||||||||||||    
T  27022442 gggactacatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaacatgcatcttattttcggcagctcattccataagaactcca 27022343  T
Q  108 cagttaagcgtgcttgacttggag 131  Q
    ||||||||||||||||||||||||    
T  27022342 cagttaagcgtgcttgacttggag 27022319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 8 - 134
Target Start/End: Complemental strand, 8080446 - 8080320
Alignment:
Q  8 gggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactcca 107  Q
    ||||| |||||||||||||||  || ||||||||||||||||||| |||||||||| ||||||||| ||||||| |||||| ||||||||||||||| ||    
T  8080446 gggactacatggttgaaggaaagctgataagaattgtttggtactacctatatcaacaagatgcattttctttttggtagcccattccataagaacttca 8080347  T
Q  108 cagttaagcgtgcttgacttggagtag 134  Q
    |||||||||||||||||||||||||||    
T  8080346 cagttaagcgtgcttgacttggagtag 8080320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 12100740 - 12100856
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    |||||||||||| |  ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||||||    
T  12100740 catggttgaaggcaagcttataagatttgtttggtactacctatatcaataagatgcatcttcttttcggtagctcatttcataagaacttcacagttaa 12100839  T
Q  115 gcgtgcttgacttggag 131  Q
    |||||||||||||||||    
T  12100840 gcgtgcttgacttggag 12100856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 32292446 - 32292565
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||  ||||||||||||||||||||||  ||||||||| ||| ||||||||||||| | |||| |||||||||||||||||||||||||    
T  32292446 catggttgaaggaatgcttataagaattgtttggtactatctatatcaacaagttgcatcttctttttgctagcccattccataagaactccacagttaa 32292545  T
Q  115 gcgtgcttgacttggagtag 134  Q
    ||||||||||||||||||||    
T  32292546 gcgtgcttgacttggagtag 32292565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 34308575 - 34308460
Alignment:
Q  16 atggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaag 115  Q
    |||||||||||||| |||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||  ||||||||||||||||||| |||||    
T  34308575 atggttgaaggaaggcttataagaactgtttggtactacctatatcaacaagatgcatcttcttttcggtagcctattccataagaactccacacttaag 34308476  T
Q  116 cgtgcttgacttggag 131  Q
    |||||||| |||||||    
T  34308475 cgtgcttggcttggag 34308460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 33852354 - 33852236
Alignment:
Q  16 atggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaag 115  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||| || |||||| |||||||||| |||||| ||||||||||||||| |||| |||||    
T  33852354 atggttgaaggaaaacttataagaattgtttggtactacctatattaacaagatgtatcttctttttggtagcccattccataagaacttcacaattaag 33852255  T
Q  116 cgtgcttgacttggagtag 134  Q
    |||||||||||||||||||    
T  33852254 cgtgcttgacttggagtag 33852236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 25148020 - 25148128
Alignment:
Q  19 gttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgt 118  Q
    ||||||||||| |||||||||||||||||||  | |||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  25148020 gttgaaggaaggcttataagaattgtttggtcttacctatatcaacaagatgcatattcttttcggtagctcattccataagaactccacagttaagcgt 25148119  T
Q  119 gcttgactt 127  Q
    |||||||||    
T  25148120 gcttgactt 25148128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 15 - 170
Target Start/End: Original strand, 28453387 - 28453538
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    |||||||||| ||| |||||||||||||||||  |||| ||||||| || ||||||||||||||||  |||||| |||||||||||||||| ||||||||    
T  28453387 catggttgaaagaaaacttataagaattgttttatactacctatattaacaagatgcatcttctttatggtagcccattccataagaactctacagttaa 28453486  T
Q  115 gcgtgcttgacttggagtagctagtctttggatggatggccttctgagaagtttcc 170  Q
    |||||||||||||||||    ||||||||||||||||| ||| ||  |||||||||    
T  28453487 gcgtgcttgacttggag----tagtctttggatggatgacctactcggaagtttcc 28453538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 41913019 - 41913138
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    |||| ||||| |||| ||||||||||||||||||| || |||||||||| ||||||| ||||||||| |||||| ||||||||||||||||| |||||||    
T  41913019 catgtttgaaagaaggcttataagaattgtttggtgctacctatatcaacaagatgcgtcttctttttggtagcccattccataagaactccgcagttaa 41913118  T
Q  115 gcgtgcttgacttggagtag 134  Q
    |||||||||||||| |||||    
T  41913119 gcgtgcttgacttgaagtag 41913138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 34309035 - 34308916
Alignment:
Q  16 atggttgaaggaagacttataagaattgtttggtactgcctatat----caataagatgcatcttcttttcggtagcacattccataagaactccacagt 111  Q
    |||||||||||||| |||||||||| ||||||||||| |||||||    ||| ||||||||||||||||||||||||  |||||||||||||||||||||    
T  34309035 atggttgaaggaaggcttataagaactgtttggtactacctatatatatcaacaagatgcatcttcttttcggtagcctattccataagaactccacagt 34308936  T
Q  112 taagcgtgcttgacttggag 131  Q
    |||||||||||| |||||||    
T  34308935 taagcgtgcttggcttggag 34308916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 10 - 176
Target Start/End: Complemental strand, 15819117 - 15818956
Alignment:
Q  10 gacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccaca 109  Q
    |||||||||||||||||||  |||| || |||||||||||||| | |||||||| | |||||||||||||||||||||||||||||||||||||| ||||    
T  15819117 gacaacatggttgaaggaatgcttagaaaaattgtttggtactacatatatcaacatgatgcatcttcttttcggtagcacattccataagaact-caca 15819019  T
Q  110 gttaagcgtgcttgacttggagtagctagtctttggatggatggccttctgagaagtttcccaaaaa 176  Q
    |||||   ||||||||||||||    ||| ||||||||||  | ||||||| |||||||||| ||||    
T  15819018 gttaaatttgcttgacttggag----taggctttggatgggcgaccttctgggaagtttcccgaaaa 15818956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 15 - 181
Target Start/End: Complemental strand, 27819343 - 27819181
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||| || ||||||||||||||||||| |||||||||| || |||||||||||||||  |||| |||||||||| ||||||||||||||    
T  27819343 catggttgaaggaaggctaataagaattgtttggtactacctatatcaacaaaatgcatcttcttttcaatagctcattccataaaaactccacagttaa 27819244  T
Q  115 gcgtgcttgacttggagtagctagtctttggatggatggccttctgagaagtttcccaaaaaacgtg 181  Q
    | ||| ||||||| |||    |||| ||||||||| || |||||||| |||||| ||| ||| ||||    
T  27819243 gtgtgtttgactttgag----tagtatttggatgggtgaccttctgataagttttccagaaagcgtg 27819181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 9 - 127
Target Start/End: Original strand, 3745144 - 3745262
Alignment:
Q  9 ggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccac 108  Q
    |||| ||||||||||||||| ||||||||||| ||||| ||||| |||||| ||| || |||||||||||||| |||||| |||||||||| ||||||||    
T  3745144 ggactacatggttgaaggaaaacttataagaactgtttagtactacctataccaacaatatgcatcttctttttggtagcccattccataataactccac 3745243  T
Q  109 agttaagcgtgcttgactt 127  Q
    ||| |||||||||||||||    
T  3745244 agtcaagcgtgcttgactt 3745262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 31 - 133
Target Start/End: Complemental strand, 21316190 - 21316088
Alignment:
Q  31 cttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgtgcttgacttgga 130  Q
    |||| ||||||||||||||||| |||||||||| |||||||||| ||||||| ||||| |||| ||||||||||||||||||||| ||||||||||||||    
T  21316190 cttaaaagaattgtttggtactacctatatcaacaagatgcatcgtcttttcagtagctcatttcataagaactccacagttaagtgtgcttgacttgga 21316091  T
Q  131 gta 133  Q
    |||    
T  21316090 gta 21316088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 14 - 111
Target Start/End: Complemental strand, 22840627 - 22840530
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagt 111  Q
    ||||||| ||| |||||||||||||||||||||||||||  ||||||||| ||||||||||||||||| | |||| ||||||||||||||||||||||    
T  22840627 acatggtcgaatgaagacttataagaattgtttggtactatctatatcaacaagatgcatcttctttttgttagctcattccataagaactccacagt 22840530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 15 - 124
Target Start/End: Complemental strand, 28375151 - 28375042
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    |||| |||||||||| |||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||| | |||||||| | || || ||||||    
T  28375151 catgattgaaggaaggcttataagaattgtttggtactacctacatcaacaagatgcatcttcttttcggtagctctttccataacagcttcatagttaa 28375052  T
Q  115 gcgtgcttga 124  Q
    ||||||||||    
T  28375051 gcgtgcttga 28375042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 44 - 127
Target Start/End: Complemental strand, 31283719 - 31283636
Alignment:
Q  44 tttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgtgcttgactt 127  Q
    ||||||||| ||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  31283719 tttggtactacctatattaacaagatgcatcttcttttcggtagcccattccataagaactccacagttaagtgtgcttgactt 31283636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 15 - 116
Target Start/End: Original strand, 3744687 - 3744788
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    |||||||||||||||||||||||||||||||||  ||| |||||| ||| || ||||| |||||||| ||||||||||| ||||||||||| ||| ||||    
T  3744687 catggttgaaggaagacttataagaattgtttgacactacctataccaacaatatgcaccttctttttggtagcacatttcataagaactctacaattaa 3744786  T
Q  115 gc 116  Q
    ||    
T  3744787 gc 3744788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 28 - 133
Target Start/End: Complemental strand, 30527566 - 30527461
Alignment:
Q  28 agacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgtgcttgactt 127  Q
    ||||||||||||||||||||||||  | || ||||||||||| ||||||||||| |||||| |||| |||||||||||||||||||||  || |||||||    
T  30527566 agacttataagaattgtttggtaccacttacatcaataagatacatcttcttttgggtagcccatttcataagaactccacagttaagattgtttgactt 30527467  T
Q  128 ggagta 133  Q
     |||||    
T  30527466 tgagta 30527461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 10 - 134
Target Start/End: Complemental strand, 15567658 - 15567534
Alignment:
Q  10 gacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccaca 109  Q
    |||| |||||| |||||||| |||||||||||||||||  ||| | |||| ||| ||||| ||||||||||| |||||  |||| |||||||||||| ||    
T  15567658 gacatcatggtggaaggaaggcttataagaattgtttgacactacatataccaacaagatacatcttctttttggtagttcatttcataagaactccgca 15567559  T
Q  110 gttaagcgtgcttgacttggagtag 134  Q
    ||||| |||| ||||||||||||||    
T  15567558 gttaatcgtgtttgacttggagtag 15567534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 15 - 87
Target Start/End: Complemental strand, 27021976 - 27021904
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtag 87  Q
    ||||||||||||||| |||||||||||||||||||||| | |||||||| |||||||||||||||||||||||    
T  27021976 catggttgaaggaaggcttataagaattgtttggtactacttatatcaacaagatgcatcttcttttcggtag 27021904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 133
Target Start/End: Original strand, 1297056 - 1297174
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||| || ||||||||||||||||||||||| |||||| ||| |||||  || |||||||||||| | ||||  |||||||||||| ||||||    
T  1297056 catggttgaagtaaaacttataagaattgtttggtactacctataccaacaagatttatattcttttcggtatcccattatataagaactccatagttaa 1297155  T
Q  115 gcgtgcttgacttggagta 133  Q
    | ||| |||||||| ||||    
T  1297156 gtgtgtttgacttgaagta 1297174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 20 - 134
Target Start/End: Original strand, 22705226 - 22705329
Alignment:
Q  20 ttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgtg 119  Q
    ||||||||||  ||||||||||||||||||||| |||||||||| ||||||||   |||||| |||| | |||||||||        |||||||||||||    
T  22705226 ttgaaggaagggttataagaattgtttggtactacctatatcaacaagatgca---tctttttggtaacccattccata--------acagttaagcgtg 22705314  T
Q  120 cttgacttggagtag 134  Q
    |||||||||||||||    
T  22705315 cttgacttggagtag 22705329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 30335002 - 30334892
Alignment:
Q  18 ggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagcg 117  Q
    ||||||| |||||||||||| ||||||||| |||| |||||| ||| ||||| ||||||||||||| |||| || | ||||| |||| || ||||||  |    
T  30335002 ggttgaaagaagacttataaaaattgtttgatactacctataccaacaagatacatcttcttttcgatagctcaattcataataacttcatagttaaatg 30334903  T
Q  118 tgcttgacttg 128  Q
    || ||||||||    
T  30334902 tgtttgacttg 30334892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 15568100 - 15568036
Alignment:
Q  17 tggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctttt 81  Q
    ||||||||||||||||||||| ||||||||||||   |||||||||| |||||||||||| ||||    
T  15568100 tggttgaaggaagacttataacaattgtttggtatgacctatatcaacaagatgcatcttttttt 15568036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 134
Target Start/End: Original strand, 10729722 - 10729791
Alignment:
Q  65 aagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgtgcttgacttggagtag 134  Q
    |||||||||||| ||||| ||  | |||||||||||||||||||| ||||||||| | ||||||||||||    
T  10729722 aagatgcatcttgttttctgttacccattccataagaactccacaattaagcgtgatagacttggagtag 10729791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 55 - 134
Target Start/End: Original strand, 25307855 - 25307932
Alignment:
Q  55 ctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgtgcttgacttggagtag 134  Q
    ||||||||| ||||| |||||| |||  |||||| |||||  |||||||||||||||||||| |||||||||||| ||||    
T  25307855 ctatatcaacaagatacatctttttt--ggtagcccattctgtaagaactccacagttaagcttgcttgacttggtgtag 25307932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 65 - 128
Target Start/End: Complemental strand, 10729733 - 10729670
Alignment:
Q  65 aagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgtgcttgacttg 128  Q
    ||||||||||||||||| ||||||  |||||||||| |||||||| ||||| ||||||| ||||    
T  10729733 aagatgcatcttctttttggtagcctattccataaggactccacaattaagggtgcttggcttg 10729670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 179 - 221
Target Start/End: Original strand, 17103335 - 17103377
Alignment:
Q  179 gtggagtcagtcgacaatcctaaaagtcgtctgagatgttaca 221  Q
    |||| |||||||||||||||||||||||||||| |||||||||    
T  17103335 gtggggtcagtcgacaatcctaaaagtcgtctgggatgttaca 17103377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 17429553 - 17429611
Alignment:
Q  19 gttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttc 77  Q
    ||||||||||||||||| || ||| ||||||||| |||||||||| |||||| ||||||    
T  17429553 gttgaaggaagacttatgagtattatttggtactacctatatcaacaagatgtatcttc 17429611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 72 - 134
Target Start/End: Original strand, 44041986 - 44042048
Alignment:
Q  72 atcttcttttcggtagcacattccataagaactccacagttaagcgtgcttgacttggagtag 134  Q
    ||||||||||| ||| ||||||||| ||||||| ||  ||||||||||||||||||| |||||    
T  44041986 atcttcttttcagtaacacattccacaagaacttcattgttaagcgtgcttgacttgaagtag 44042048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 6466760 - 6466820
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatctt 76  Q
    ||||||| ||||| ||||||||| |||||||||||||| |||||| ||| ||||||||||||    
T  6466760 catggttaaagga-gacttataaaaattgtttggtactacctataccaacaagatgcatctt 6466820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 184 - 221
Target Start/End: Complemental strand, 10844503 - 10844466
Alignment:
Q  184 gtcagtcgacaatcctaaaagtcgtctgagatgttaca 221  Q
    |||||||||||||||||||||||||||| |||||||||    
T  10844503 gtcagtcgacaatcctaaaagtcgtctgggatgttaca 10844466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 29971499 - 29971450
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaa 63  Q
    ||||||||||||||||| |||||||||||||||| ||||  |||||||||    
T  29971499 acatggttgaaggaagatttataagaattgtttgatactatctatatcaa 29971450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 36968491 - 36968434
Alignment:
Q  16 atggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcat 73  Q
    |||||||||||| ||||||||||||||| ||||| || | |||||||| |||||||||    
T  36968491 atggttgaaggatgacttataagaattgattggtgctacttatatcaacaagatgcat 36968434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 101; Significance: 8e-50; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 28561795 - 28561911
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  28561795 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 28561894  T
Q  115 gcgtgcttgacttggag 131  Q
    |||||||||||||||||    
T  28561895 gcgtgcttgacttggag 28561911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 31284373 - 31284257
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  31284373 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 31284274  T
Q  115 gcgtgcttgacttggag 131  Q
    |||||||||||||||||    
T  31284273 gcgtgcttgacttggag 31284257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 13150652 - 13150535
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagtta 113  Q
    |||||||||||||||| ||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13150652 acatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagtta 13150553  T
Q  114 agcgtgcttgacttggag 131  Q
    ||||||||||||||||||    
T  13150552 agcgtgcttgacttggag 13150535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 39640985 - 39641102
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagtta 113  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  39640985 acatggttgaaggaagacttataagagttgtttggtactacctatatcaataagatgcatcttctttttggtagctcattccataagaactccacagtta 39641084  T
Q  114 agcgtgcttgacttggag 131  Q
    |||||| |||||||||||    
T  39641085 agcgtgtttgacttggag 39641102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 20885215 - 20885095
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagtta 113  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||  |||||||||||||||||||||||||| |||    
T  20885215 acatggttgaaggaagacttataagaattgtttgatactacctatatcaacaagatgcatcttctttttagtagcacattccataagaactccacaatta 20885116  T
Q  114 agcgtgcttgacttggagtag 134  Q
    |||||||||||||||||||||    
T  20885115 agcgtgcttgacttggagtag 20885095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 25238782 - 25238662
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagtta 113  Q
    |||||||||||||||||||||||||||||||||||||||  || |||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  25238782 acatggttgaaggaagacttataagaattgtttggtactatctttatcaacaagatgcatcttctttttggtagcccattccataagaactccacagtta 25238683  T
Q  114 agcgtgcttgacttggagtag 134  Q
    |||||||||||||||||||||    
T  25238682 agcgtgcttgacttggagtag 25238662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 8 - 131
Target Start/End: Complemental strand, 11180138 - 11180015
Alignment:
Q  8 gggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactcca 107  Q
    ||||| |||||||||||||||| ||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  11180138 gggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcatttcataagaactcca 11180039  T
Q  108 cagttaagcgtgcttgacttggag 131  Q
    ||||||||||||||||||||||||    
T  11180038 cagttaagcgtgcttgacttggag 11180015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 18 - 152
Target Start/End: Complemental strand, 4067454 - 4067324
Alignment:
Q  18 ggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagcg 117  Q
    |||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||| |||||| |||| |||||||||||||||||||||||    
T  4067454 ggttgaaggaagacttataaaaattgtttggtactacctatatcaacaagatgcatcttctttttggtagctcattacataagaactccacagttaagcg 4067355  T
Q  118 tgcttgacttggagtagctagtctttggatggatg 152  Q
    ||||||||||||||    |||||||||||||||||    
T  4067354 tgcttgacttggag----tagtctttggatggatg 4067324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 14813998 - 14814114
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||| ||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  14813998 catggttaaaggaaggcttataataattgtttggtactacctatatcaataagatgcatcttcttttcggtagctcgttccataagaactccacagttaa 14814097  T
Q  115 gcgtgcttgacttggag 131  Q
    |||||||||||||||||    
T  14814098 gcgtgcttgacttggag 14814114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 8 - 131
Target Start/End: Complemental strand, 13150203 - 13150080
Alignment:
Q  8 gggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactcca 107  Q
    ||||| |||||||||||||||| ||||||||||||||| |||||| ||| |||||| |||||||||||||||||| ||||| ||||||||||||||||||    
T  13150203 gggactacatggttgaaggaaggcttataagaattgttgggtactacctgtatcaacaagatgcatcttcttttcagtagctcattccataagaactcca 13150104  T
Q  108 cagttaagcgtgcttgacttggag 131  Q
    ||||||||||||||||||||||||    
T  13150103 cagttaagcgtgcttgacttggag 13150080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 8 - 131
Target Start/End: Original strand, 32227542 - 32227665
Alignment:
Q  8 gggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactcca 107  Q
    ||||| |||||||||||||||| ||||||||||||||| |||||| ||||||| || |||||||||||||||||||||||| |||| |||||||||||||    
T  32227542 gggactacatggttgaaggaaggcttataagaattgttgggtactacctatattaacaagatgcatcttcttttcggtagctcatttcataagaactcca 32227641  T
Q  108 cagttaagcgtgcttgacttggag 131  Q
    ||||||||||||||||||||||||    
T  32227642 cagttaagcgtgcttgacttggag 32227665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 17 - 131
Target Start/End: Original strand, 50347797 - 50347911
Alignment:
Q  17 tggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagc 116  Q
    ||||||||||||| ||||||||||||||| |||||| |||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  50347797 tggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttctttttggtagctcattccataagaactccacagttaagc 50347896  T
Q  117 gtgcttgacttggag 131  Q
    |||||||||||||||    
T  50347897 gtgcttgacttggag 50347911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 16811430 - 16811546
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||| ||||||||||||||| |||||| ||||| |||| |||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  16811430 catggttgaaggaaggcttataagaattgttgggtactacctatttcaacaagatgcatcttcttttcggtagctcattccataagaattccacagttaa 16811529  T
Q  115 gcgtgcttgacttggag 131  Q
    |||||||||||||||||    
T  16811530 gcgtgcttgacttggag 16811546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 8 - 131
Target Start/End: Complemental strand, 32227325 - 32227202
Alignment:
Q  8 gggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactcca 107  Q
    ||||| |||||||||||||||| ||||||||||||||| |||||| ||||||| || ||||||||||||||||| |||||| |||| |||||||||||||    
T  32227325 gggactacatggttgaaggaaggcttataagaattgttgggtactacctatattaacaagatgcatcttctttttggtagctcatttcataagaactcca 32227226  T
Q  108 cagttaagcgtgcttgacttggag 131  Q
    ||||||||||||||||||||||||    
T  32227225 cagttaagcgtgcttgacttggag 32227202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 32386830 - 32386715
Alignment:
Q  16 atggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaag 115  Q
    |||||||||||||| |||||||||||||||||||||| ||||||| || |||||||||||||||||| |||||  |||||||||||||||||||||||||    
T  32386830 atggttgaaggaaggcttataagaattgtttggtactacctatattaacaagatgcatcttcttttcagtagctaattccataagaactccacagttaag 32386731  T
Q  116 cgtgcttgacttggag 131  Q
    ||||||||||||||||    
T  32386730 cgtgcttgacttggag 32386715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 8 - 134
Target Start/End: Complemental strand, 25230352 - 25230226
Alignment:
Q  8 gggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactcca 107  Q
    ||||| |||||||||||||||| |||||||||||| ||||||||| |||||||||| ||||| ||||||||||| |||||| ||||| ||||||||||||    
T  25230352 gggactacatggttgaaggaaggcttataagaattatttggtactacctatatcaacaagatacatcttctttttggtagcccattcaataagaactcca 25230253  T
Q  108 cagttaagcgtgcttgacttggagtag 134  Q
    |||||| ||||||||||||||||||||    
T  25230252 cagttatgcgtgcttgacttggagtag 25230226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 8 - 134
Target Start/End: Complemental strand, 25237939 - 25237813
Alignment:
Q  8 gggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactcca 107  Q
    ||||| |||||||||||||||| |||||||||||| ||||||||| |||||||||| ||||| ||||||||||| |||||| ||||| ||||||||||||    
T  25237939 gggactacatggttgaaggaaggcttataagaattatttggtactacctatatcaacaagatacatcttctttttggtagcccattcaataagaactcca 25237840  T
Q  108 cagttaagcgtgcttgacttggagtag 134  Q
    |||||| ||||||||||||||||||||    
T  25237839 cagttatgcgtgcttgacttggagtag 25237813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 14 - 172
Target Start/End: Original strand, 30529735 - 30529888
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagtta 113  Q
    |||||||||||| ||| |||||||||||| ||||||||| |||||||||| ||||||||||||||||| |||||| ||||||||||||||| || |||||    
T  30529735 acatggttgaagtaaggcttataagaattttttggtactacctatatcaacaagatgcatcttctttttggtagcccattccataagaacttcatagtta 30529834  T
Q  114 agcgtgcttgacttggagtagctagtctttggatggatggccttctgagaagtttccca 172  Q
    ||||||||||||||||||    |||||||||||||| || ||| ||| |||||||||||    
T  30529835 agcgtgcttgacttggag----tagtctttggatgggtgacctactg-gaagtttccca 30529888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 25230803 - 25230683
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagtta 113  Q
    ||||||||||||||||  ||||||||||||||||||||| |||||||||| ||||||||| ||||||| |||||| |||||||||||||||| ||| |||    
T  25230803 acatggttgaaggaaggtttataagaattgtttggtactacctatatcaacaagatgcattttctttttggtagcccattccataagaactcaacaatta 25230704  T
Q  114 agcgtgcttgacttggagtag 134  Q
    |||||||||||||||||||||    
T  25230703 agcgtgcttgacttggagtag 25230683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 25238390 - 25238270
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagtta 113  Q
    ||||||||||||||||  ||||||||||||||||||||| |||||||||| ||||||||| ||||||| |||||| |||||||||||||||| ||| |||    
T  25238390 acatggttgaaggaaggtttataagaattgtttggtactacctatatcaacaagatgcattttctttttggtagcccattccataagaactcaacaatta 25238291  T
Q  114 agcgtgcttgacttggagtag 134  Q
    |||||||||||||||||||||    
T  25238290 agcgtgcttgacttggagtag 25238270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 15 - 127
Target Start/End: Complemental strand, 27187427 - 27187315
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||| || |||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  27187427 catggttaaatgaaggcttataagaattgtttggtactacctatatcactaagatgcatcttcttttcggtagctcatttcataagaactccacagttaa 27187328  T
Q  115 gcgtgcttgactt 127  Q
    |||||||||||||    
T  27187327 gcgtgcttgactt 27187315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 8067329 - 8067445
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||  | |||||||||||||||| ||||| |||||||||| |||||||||||| ||||||||||| |||||||||||||||||| ||||||    
T  8067329 catggttgaaggccggcttataagaattgtttagtactacctatatcaacaagatgcatctttttttcggtagctcattccataagaactccatagttaa 8067428  T
Q  115 gcgtgcttgacttggag 131  Q
    |||||||||||||||||    
T  8067429 gcgtgcttgacttggag 8067445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 29224373 - 29224489
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    |||||||||||||||||||||||||||||||||||||| ||||||  || |||||||||||||||||||||||| ||  ||||||||||| |||| ||||    
T  29224373 catggttgaaggaagacttataagaattgtttggtactacctatactaacaagatgcatcttcttttcggtagcccaaaccataagaacttcacaattaa 29224472  T
Q  115 gcgtgcttgacttggag 131  Q
    |||||||||||||||||    
T  29224473 gcgtgcttgacttggag 29224489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 39653213 - 39653329
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||  ||||||||||||||| | |||| |||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  39653213 catggttgaaggaaagcttataagaattgttggatactacctatatcaacaagatgcatcttcttttcggtagctcattccatgagaactccacagttaa 39653312  T
Q  115 gcgtgcttgacttggag 131  Q
    | |||||||||||||||    
T  39653313 gtgtgcttgacttggag 39653329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 14820211 - 14820318
Alignment:
Q  23 aaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgtgctt 122  Q
    ||||||| |||||||||||||||||||||| | |||||||| |||||||||||| ||||||||||| | |||||||||||||||||||||||||||||||    
T  14820211 aaggaaggcttataagaattgtttggtactacttatatcaacaagatgcatcttattttcggtagctcgttccataagaactccacagttaagcgtgctt 14820310  T
Q  123 gacttgga 130  Q
    ||||||||    
T  14820311 gacttgga 14820318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 7493930 - 7494047
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||| |||||||||||| ||||||||| | |||||||| |||||||||||||||||||||||| ||  |||||||||||||||| ||||    
T  7493930 catggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatgcatcttcttttcggtagcccaaaccataagaactccacatttaa 7494029  T
Q  115 gcgtgcttgacttggagt 132  Q
    || |||||||||||||||    
T  7494030 gcatgcttgacttggagt 7494047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 14 - 111
Target Start/End: Complemental strand, 32797033 - 32796936
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagt 111  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||    
T  32797033 acatggttgaagcaagacttataagaattgtttggtactacctatatcaacaagatgcatcttcttttttgtagcacattccataagaactccacagt 32796936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 15 - 128
Target Start/End: Original strand, 41472350 - 41472462
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||| |||||||||||||||||||||| | |||||||| |||||||||||||||||||||||  ||||||||||||||||||| |||||    
T  41472350 catggttgaaggaag-cttataagaattgtttggtactacatatatcaacaagatgcatcttcttttcggtagatcattccataagaactccacggttaa 41472448  T
Q  115 gcgtgcttgacttg 128  Q
     |||||||||||||    
T  41472449 acgtgcttgacttg 41472462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 25239173 - 25239070
Alignment:
Q  16 atggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaag 115  Q
    |||||||||||||  |||||||||||| ||||||||| |||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  25239173 atggttgaaggaacgcttataagaattttttggtactacctatatcaacaagatgcatcttctttttggtagcccattccataagaactccacagttaag 25239074  T
Q  116 cgtg 119  Q
    ||||    
T  25239073 cgtg 25239070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 25248160 - 25248279
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||| ||||||   ||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||| |||||||||| |||||||| ||| |    
T  25248160 catggttaaaggaatgtttataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagcccattccataataactccacggttca 25248259  T
Q  115 gcgtgcttgacttggagtag 134  Q
    ||||||||||||||||||||    
T  25248260 gcgtgcttgacttggagtag 25248279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 25802645 - 25802526
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||| | ||||| || |||||||| |||||||||| |||||||||| ||||||||||||||||||| |||| ||||||||||||| |||||||||||    
T  25802645 catggttaacggaaggctgataagaatggtttggtactacctatatcaacaagatgcatcttcttttcgatagcccattccataagaaatccacagttaa 25802546  T
Q  115 gcgtgcttgacttggagtag 134  Q
    ||||| ||||||||||||||    
T  25802545 gcgtgtttgacttggagtag 25802526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 8 - 134
Target Start/End: Original strand, 2911137 - 2911263
Alignment:
Q  8 gggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactcca 107  Q
    ||||| ||||||||||| |||   |||||| ||||||||| || | |||||||||| ||||||||| ||||||| |||||| ||||||||||||||||||    
T  2911137 gggaccacatggttgaaagaatggttataaaaattgtttgatattacctatatcaacaagatgcatattctttttggtagctcattccataagaactcca 2911236  T
Q  108 cagttaagcgtgcttgacttggagtag 134  Q
    |||||||||||||||||||||||||||    
T  2911237 cagttaagcgtgcttgacttggagtag 2911263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 8 - 134
Target Start/End: Original strand, 37045077 - 37045203
Alignment:
Q  8 gggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactcca 107  Q
    ||||| |||||  ||||||||  |||||||||||||||||||| | |||||||||| ||| ||||||||||||| |||| |  |||||||||||||||||    
T  37045077 gggactacatgaatgaaggaatgcttataagaattgtttggtaatacctatatcaacaaggtgcatcttctttttggtaccctattccataagaactcca 37045176  T
Q  108 cagttaagcgtgcttgacttggagtag 134  Q
    |||||||||||||||||||||||||||    
T  37045177 cagttaagcgtgcttgacttggagtag 37045203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 7477240 - 7477359
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||| |||||||||||| ||||||||| | |||||||| ||||| |||||||||||||||||| ||  |||||||||||||||| ||||    
T  7477240 catggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttcttttcggtagcccaaaccataagaactccacatttaa 7477339  T
Q  115 gcgtgcttgacttggagtag 134  Q
    || |||||||||| ||||||    
T  7477340 gcatgcttgacttagagtag 7477359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 15 - 168
Target Start/End: Complemental strand, 25803101 - 25802952
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||| ||||||| |||||||||||||||||| ||||||  || |||||| ||||||||||||||| | |||| ||||||||||||  ||||||    
T  25803101 catggttgaagtaagacttgtaagaattgtttggtactacctataaaaacaagatgtatcttcttttcggtatcccatttcataagaactccgtagttaa 25803002  T
Q  115 gcgtgcttgacttggagtagctagtctttggatggatggccttctgagaagttt 168  Q
    ||||||||||||||||    |||||||| |||||| || |||| ||||| ||||    
T  25803001 gcgtgcttgacttgga----ctagtcttaggatgggtgaccttatgagatgttt 25802952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 15 - 128
Target Start/End: Original strand, 16810974 - 16811087
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||| ||||| |||||||||||||||  |||||  ||||||| | |||||||||||||||||||||||| ||||||||||||||| |||| ||||    
T  16810974 catggttgatggaaggcttataagaattgttgcgtactaactatatctacaagatgcatcttcttttcggtagctcattccataagaacttcacatttaa 16811073  T
Q  115 gcgtgcttgacttg 128  Q
    | ||||||||||||    
T  16811074 gtgtgcttgacttg 16811087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 41474047 - 41474161
Alignment:
Q  16 atggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaag 115  Q
    |||||| ||||||||||||||||||||||||| |||| |||||||||| |||||  || ||||||| ||| |  ||||| |||| ||||||||||| |||    
T  41474047 atggttaaaggaagacttataagaattgtttgatacttcctatatcaacaagattgatattctttttggtggatcattctataaaaactccacagtcaag 41474146  T
Q  116 cgtgcttgacttgga 130  Q
    |||||||||||||||    
T  41474147 cgtgcttgacttgga 41474161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 15 - 114
Target Start/End: Complemental strand, 26310086 - 26309987
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||| || ||||||||||| |||| |||| | |||| ||| ||||||||||||||||  |||||| |||||||| ||||||| ||||||||    
T  26310086 catggttgaaggacgatttataagaattttttgttactacatataccaaaaagatgcatcttctttatggtagctcattccattagaactcgacagttaa 26309987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 15 - 133
Target Start/End: Complemental strand, 31104057 - 31103937
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtag--cacattccataagaactccacagtt 112  Q
    ||||||| ||||||||||||||||||||||||| ||||  ||||| |||  |||||||| ||||||| |||||  | ||||||||||||||| |||| ||    
T  31104057 catggttcaaggaagacttataagaattgtttgatactatctataccaactagatgcattttctttttggtagctctcattccataagaacttcacattt 31103958  T
Q  113 aagcgtgcttgacttggagta 133  Q
    ||| ||  ||||||| |||||    
T  31103957 aagtgtctttgactttgagta 31103937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 34 - 131
Target Start/End: Original strand, 3899868 - 3899965
Alignment:
Q  34 ataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgtgcttgacttggag 131  Q
    ||||||||||||||||||| | |||| ||| |||||||||||| ||||||  | ||||   ||||||||||||||| | |||| ||||||||||||||    
T  3899868 ataagaattgtttggtactacatataccaacaagatgcatctttttttcgacaacacaaatcataagaactccacaataaagcatgcttgacttggag 3899965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 55 - 131
Target Start/End: Complemental strand, 53150869 - 53150793
Alignment:
Q  55 ctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgtgcttgacttggag 131  Q
    |||||| || ||||||||| || |||||||||||  ||| |||||||||| ||||||||| ||||||| ||||||||    
T  53150869 ctatattaacaagatgcatatttttttcggtagccaatttcataagaacttcacagttaaccgtgcttaacttggag 53150793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 3890046 - 3890094
Alignment:
Q  34 ataagaattgtttggtactgcctatatcaataagatgcatcttcttttc 82  Q
    |||||||||||||| |||| | |||||||| |||||||||||| |||||    
T  3890046 ataagaattgtttgctactacatatatcaacaagatgcatctttttttc 3890094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 94 - 130
Target Start/End: Original strand, 15381258 - 15381294
Alignment:
Q  94 ccataagaactccacagttaagcgtgcttgacttgga 130  Q
    |||||||||||||||| ||||| ||||||||||||||    
T  15381258 ccataagaactccacatttaagtgtgcttgacttgga 15381294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 130
Target Start/End: Original strand, 15392570 - 15392674
Alignment:
Q  26 gaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgtgcttgac 125  Q
    |||| |||||||||||||||||||| | ||  || ||| |||||||  ||||||||| |||||     |||| ||||||||| ||||||  |||||||||    
T  15392570 gaaggcttataagaattgtttggtattaccggtaccaacaagatgccacttcttttcagtagccaggaccatcagaactccaaagttaaatgtgcttgac 15392669  T
Q  126 ttgga 130  Q
    |||||    
T  15392670 ttgga 15392674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 94 - 130
Target Start/End: Original strand, 15396493 - 15396529
Alignment:
Q  94 ccataagaactccacagttaagcgtgcttgacttgga 130  Q
    |||||||||||||||| ||||| ||||||||||||||    
T  15396493 ccataagaactccacatttaagtgtgcttgacttgga 15396529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 130
Target Start/End: Original strand, 15405606 - 15405710
Alignment:
Q  26 gaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgtgcttgac 125  Q
    |||| |||||||||||||||||||| | ||  || ||| |||||||  ||||||||| |||||     |||| ||||||||| ||||||  |||||||||    
T  15405606 gaaggcttataagaattgtttggtattaccggtaccaacaagatgccacttcttttcagtagccaggaccattagaactccaaagttaaatgtgcttgac 15405705  T
Q  126 ttgga 130  Q
    |||||    
T  15405706 ttgga 15405710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 94 - 130
Target Start/End: Original strand, 15410629 - 15410665
Alignment:
Q  94 ccataagaactccacagttaagcgtgcttgacttgga 130  Q
    |||||||||||||||| ||||| ||||||||||||||    
T  15410629 ccataagaactccacatttaagtgtgcttgacttgga 15410665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 130
Target Start/End: Original strand, 15411015 - 15411119
Alignment:
Q  26 gaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgtgcttgac 125  Q
    |||| |||||||||||||||||||| | ||  || ||| |||||||  ||||||||| |||||     |||| ||||||||| ||||||  |||||||||    
T  15411015 gaaggcttataagaattgtttggtattaccggtaccaacaagatgccacttcttttcagtagccaggaccattagaactccaaagttaaatgtgcttgac 15411114  T
Q  126 ttgga 130  Q
    |||||    
T  15411115 ttgga 15411119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 130
Target Start/End: Original strand, 15417431 - 15417535
Alignment:
Q  26 gaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgtgcttgac 125  Q
    |||| |||||||||||||||||||| | ||  || ||| |||||||  ||||||||| |||||     |||| ||||||||| ||||||  |||||||||    
T  15417431 gaaggcttataagaattgtttggtattaccggtaccaacaagatgccacttcttttcagtagccaggaccattagaactccaaagttaaatgtgcttgac 15417530  T
Q  126 ttgga 130  Q
    |||||    
T  15417531 ttgga 15417535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 15 - 47
Target Start/End: Complemental strand, 47518416 - 47518384
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttg 47  Q
    |||||||||||||| ||||||||||||||||||    
T  47518416 catggttgaaggaaaacttataagaattgtttg 47518384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 100; Significance: 3e-49; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 8 - 131
Target Start/End: Original strand, 2465775 - 2465898
Alignment:
Q  8 gggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactcca 107  Q
    ||||| |||||||||||||||| ||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  2465775 gggactacatggttgaaggaaggcttataagagttgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactcca 2465874  T
Q  108 cagttaagcgtgcttgacttggag 131  Q
    ||||||||||||||||||||||||    
T  2465875 cagttaagcgtgcttgacttggag 2465898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 8 - 133
Target Start/End: Complemental strand, 6719178 - 6719053
Alignment:
Q  8 gggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactcca 107  Q
    ||||| |||||||||||||||  |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  6719178 gggactacatggttgaaggaatgcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactcca 6719079  T
Q  108 cagttaagcgtgcttgacttggagta 133  Q
     |||||||||||||||||||||||||    
T  6719078 gagttaagcgtgcttgacttggagta 6719053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 42515592 - 42515709
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagtta 113  Q
    |||||||||||||||| |||||||||| ||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  42515592 acatggttgaaggaaggcttataagaagtgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagtta 42515691  T
Q  114 agcgtgcttgacttggag 131  Q
    ||||||||||||||||||    
T  42515692 agcgtgcttgacttggag 42515709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 2941854 - 2941738
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||| || ||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  2941854 catggttgaaggaaggctgataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 2941755  T
Q  115 gcgtgcttgacttggag 131  Q
    |||||||||||||||||    
T  2941754 gcgtgcttgacttggag 2941738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 13125233 - 13125117
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  13125233 catggttgaaggaaggcttataagaattgtttggtactacctatattaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 13125134  T
Q  115 gcgtgcttgacttggag 131  Q
    |||||||||||||||||    
T  13125133 gcgtgcttgacttggag 13125117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 8 - 131
Target Start/End: Original strand, 2465966 - 2466089
Alignment:
Q  8 gggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactcca 107  Q
    ||||| |||||||||||||||| ||||||||| |||||||||||| |||||||||| ||| |||||||||||||||||||| ||||||||||||||||||    
T  2465966 gggactacatggttgaaggaaggcttataagagttgtttggtactacctatatcaacaagttgcatcttcttttcggtagctcattccataagaactcca 2466065  T
Q  108 cagttaagcgtgcttgacttggag 131  Q
    ||||||||||||||||||||||||    
T  2466066 cagttaagcgtgcttgacttggag 2466089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 8 - 131
Target Start/End: Original strand, 28495896 - 28496019
Alignment:
Q  8 gggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactcca 107  Q
    ||||| |||||||||||||||| |||||||||| |||| |||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  28495896 gggactacatggttgaaggaaggcttataagaactgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactcca 28495995  T
Q  108 cagttaagcgtgcttgacttggag 131  Q
    ||||||||||||||||||||||||    
T  28495996 cagttaagcgtgcttgacttggag 28496019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 8 - 131
Target Start/End: Complemental strand, 34405695 - 34405572
Alignment:
Q  8 gggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactcca 107  Q
    ||||| |||||||||||||||| ||||||||||||||| |||||| |||||||||| | |||||||||||||||||||||| ||||||||||||||||||    
T  34405695 gggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaggatgcatcttcttttcggtagctcattccataagaactcca 34405596  T
Q  108 cagttaagcgtgcttgacttggag 131  Q
    ||||||||||||||||||||||||    
T  34405595 cagttaagcgtgcttgacttggag 34405572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 8 - 131
Target Start/End: Original strand, 36422294 - 36422417
Alignment:
Q  8 gggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactcca 107  Q
    ||||| |||||||||||||||| ||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  36422294 gggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcatttcataagaactcca 36422393  T
Q  108 cagttaagcgtgcttgacttggag 131  Q
    ||||||||||||||||||||||||    
T  36422394 cagttaagcgtgcttgacttggag 36422417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 42515141 - 42515260
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||| |||||| |||||||||||||||||||||||||    
T  42515141 catgattgaaggaagacttataagaattgtttggtactacctatatcaacaagatgcattttctttttggtagctcattccataagaactccacagttaa 42515240  T
Q  115 gcgtgcttgacttggagtag 134  Q
    ||||||||||||||||||||    
T  42515241 gcgtgcttgacttggagtag 42515260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 15 - 176
Target Start/End: Original strand, 25182410 - 25182567
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |||||| ||||||||| | ||||||||||||||| |||||||||    
T  25182410 catggttgaaggaagacttataagaattgtttggtactacctatatcaacaagatacatcttattttcggtaactcattccataagaacttcacagttaa 25182509  T
Q  115 gcgtgcttgacttggagtagctagtctttggatggatggccttctgagaagtttcccaaaaa 176  Q
    | ||| |||||||||||    ||||||||||||||| | ||||||| |||||||| ||||||    
T  25182510 gtgtgtttgacttggag----tagtctttggatggaggaccttctgggaagtttctcaaaaa 25182567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 35474219 - 35474099
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagtta 113  Q
    |||||||||||| |||||||||||||||||||| ||||| | |||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  35474219 acatggttgaagaaagacttataagaattgtttagtactacttatatcaacaagatgcatcttctttttggtagctcattccataagaactccacagtta 35474120  T
Q  114 agcgtgcttgacttggagtag 134  Q
    |||||| ||||||||||||||    
T  35474119 agcgtgtttgacttggagtag 35474099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 16 - 131
Target Start/End: Original strand, 9125009 - 9125124
Alignment:
Q  16 atggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaag 115  Q
    |||||| ||||||  |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  9125009 atggttaaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaag 9125108  T
Q  116 cgtgcttgacttggag 131  Q
    ||||||||||| ||||    
T  9125109 cgtgcttgactcggag 9125124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 8 - 131
Target Start/End: Complemental strand, 28495712 - 28495589
Alignment:
Q  8 gggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactcca 107  Q
    ||||| ||||||||||||||||||||||||||||||||  ||  | |||||||||| ||||||||||||||||| |||||| ||||||||||||||||||    
T  28495712 gggactacatggttgaaggaagacttataagaattgttgagttttacctatatcaacaagatgcatcttcttttaggtagctcattccataagaactcca 28495613  T
Q  108 cagttaagcgtgcttgacttggag 131  Q
    ||||||||||||||||||||||||    
T  28495612 cagttaagcgtgcttgacttggag 28495589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 8 - 134
Target Start/End: Original strand, 46425783 - 46425909
Alignment:
Q  8 gggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactcca 107  Q
    ||||| |||||||||||  ||| |||||||||||||||||||| | |||||||||| |||||||||||||||||||||| |  |||||||||||||||||    
T  46425783 gggactacatggttgaaataaggcttataagaattgtttggtattacctatatcaacaagatgcatcttcttttcggtatcttattccataagaactcca 46425882  T
Q  108 cagttaagcgtgcttgacttggagtag 134  Q
    |||||||||||||||||||||||||||    
T  46425883 cagttaagcgtgcttgacttggagtag 46425909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 14 - 134
Target Start/End: Original strand, 679865 - 679984
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagtta 113  Q
    |||||| ||||||||| ||||||||||||||| |||||| |||||||||| ||||||||| ||||||| |||||| ||||||||||||||||||||||||    
T  679865 acatggctgaaggaaggcttataagaattgtt-ggtactacctatatcaacaagatgcatattctttttggtagcccattccataagaactccacagtta 679963  T
Q  114 agcgtgcttgacttggagtag 134  Q
    |||||||||||||||||||||    
T  679964 agcgtgcttgacttggagtag 679984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 2189193 - 2189309
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    |||||||||| |||| |||||||||||||||||| ||| |||||||||| ||||||||||||||||||| |||| |||| ||||||||||||||||||||    
T  2189193 catggttgaaagaaggcttataagaattgtttggcactacctatatcaacaagatgcatcttcttttcgatagctcatttcataagaactccacagttaa 2189292  T
Q  115 gcgtgcttgacttggag 131  Q
    |||||||||||||||||    
T  2189293 gcgtgcttgacttggag 2189309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 2193305 - 2193421
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||| |||| |||| |||||||||||||||    
T  2193305 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctattcggtagctcatttcataggaactccacagttaa 2193404  T
Q  115 gcgtgcttgacttggag 131  Q
    |||||||||| ||||||    
T  2193405 gcgtgcttgatttggag 2193421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 14 - 127
Target Start/End: Complemental strand, 6747696 - 6747583
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagtta 113  Q
    ||||||||||||||||  ||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||  ||||||||| |||||||||||||    
T  6747696 acatggttgaaggaaggattataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagcctattccataaaaactccacagtta 6747597  T
Q  114 agcgtgcttgactt 127  Q
    ||||||||||||||    
T  6747596 agcgtgcttgactt 6747583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 2611748 - 2611630
Alignment:
Q  16 atggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaag 115  Q
    ||||| |||||||| ||||||||||||||||||||||  ||||| ||| ||||||||||||||||| |||||| ||||| |||||||||||| |||||||    
T  2611748 atggtggaaggaaggcttataagaattgtttggtactatctataacaacaagatgcatcttctttttggtagcccattctataagaactccatagttaag 2611649  T
Q  116 cgtgcttgacttggagtag 134  Q
    ||||||| |||||||||||    
T  2611648 cgtgctttacttggagtag 2611630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 14 - 169
Target Start/End: Complemental strand, 22529333 - 22529182
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagtta 113  Q
    |||||||||||||||| |||||||||| |||||||||||  |||||| || |||||||||||||||||| ||| | |||| || ||||||| ||||||||    
T  22529333 acatggttgaaggaaggcttataagaaatgtttggtactatctatataaacaagatgcatcttcttttcagtaactcattacaaaagaacttcacagtta 22529234  T
Q  114 agcgtgcttgacttggagtagctagtctttggatggatggccttctgagaagtttc 169  Q
    |||||| |||||||||||    |||||||||||||| || ||| ||||||||||||    
T  22529233 agcgtgtttgacttggag----tagtctttggatgggtgacctactgagaagtttc 22529182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 17 - 134
Target Start/End: Complemental strand, 35527216 - 35527099
Alignment:
Q  17 tggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagc 116  Q
    |||||||| |||| ||||||||||||||||||| || |||||||||| ||||||||| |||||||| ||||  ||||||||| |||||||||||||||||    
T  35527216 tggttgaaagaaggcttataagaattgtttggtgctacctatatcaacaagatgcatattcttttcagtagtccattccataggaactccacagttaagc 35527117  T
Q  117 gtgcttgacttggagtag 134  Q
     |||||||||||||||||    
T  35527116 atgcttgacttggagtag 35527099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 15 - 127
Target Start/End: Complemental strand, 5406685 - 5406573
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    |||||||||||||||| ||||||||||||||||||| | |||||||||| |||||||||||| |||| ||| || ||  |||||||||||||||||||||    
T  5406685 catggttgaaggaagatttataagaattgtttggtattacctatatcaacaagatgcatcttatttttggttgcccaaaccataagaactccacagttaa 5406586  T
Q  115 gcgtgcttgactt 127  Q
    |||||||||||||    
T  5406585 gcgtgcttgactt 5406573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 15 - 168
Target Start/End: Original strand, 9623257 - 9623405
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    |||||| ||||||  |||||||||||||||||| |||  |||||||||| ||||||||||||| |||||||||  ||||| |||||||||||||||||||    
T  9623257 catggtagaaggagtacttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagttcattctataagaactccacagttaa 9623355  T
Q  115 gcgtgcttgacttggagtagctagtctttggatggatggccttctgagaagttt 168  Q
    ||||| ||||||||||    ||||||||||||||| || | |||||||||||||    
T  9623356 gcgtgtttgacttgga----ctagtctttggatgggtgacgttctgagaagttt 9623405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 11517480 - 11517386
Alignment:
Q  21 tgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaag 115  Q
    ||||||||| |||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||| ||||||||||||||||| ||||||||    
T  11517480 tgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatctacttttcggtagctcattccataagaactccgcagttaag 11517386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 26421401 - 26421287
Alignment:
Q  16 atggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaag 115  Q
    |||||||||||||||||||||||||||| ||| |||| |||||||||| ||||||||| || ||||||||||  |||||||||||||||||||||||||     
T  26421401 atggttgaaggaagacttataagaattgcttgatactacctatatcaacaagatgcatatttttttcggtagtccattccataagaactccacagttaaa 26421302  T
Q  116 cgtgcttgacttgga 130  Q
    |||| |||| |||||    
T  26421301 cgtgtttgaattgga 26421287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 18833335 - 18833447
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||| ||||  |||||| ||||||||| ||||| |||||||||| ||||||||||||||||||||||||  ||| ||||||||||||||||||||    
T  18833335 catggttgagggaaagcttatatgaattgtttagtactacctatatcaacaagatgcatcttcttttcggtagctaattacataagaactccacagttaa 18833434  T
Q  115 gcgtgcttgactt 127  Q
    ||||| |||||||    
T  18833435 gcgtgtttgactt 18833447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 26421857 - 26421738
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||| ||| || |||||||||||| |||||| |||||| ||| |||||| ||||||||||||||||| ||||||||||||||| |||||||||    
T  26421857 catggttgaagtaaggctcataagaattgttaggtactccctataccaacaagatgaatcttcttttcggtagcccattccataagaactacacagttaa 26421758  T
Q  115 gcgtgcttgacttggagtag 134  Q
    ||||| ||| ||| ||||||    
T  26421757 gcgtgtttggcttcgagtag 26421738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 16 - 122
Target Start/End: Complemental strand, 31406680 - 31406574
Alignment:
Q  16 atggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaag 115  Q
    ||||||||| || ||||||| |||||||||||||  | |||||||||| |||||||||||||||||||||||| | || |||||||||||||||||||||    
T  31406680 atggttgaaagatgacttattagaattgtttggtgttacctatatcaacaagatgcatcttcttttcggtagcccgtttcataagaactccacagttaag 31406581  T
Q  116 cgtgctt 122  Q
    |||||||    
T  31406580 cgtgctt 31406574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 14 - 152
Target Start/End: Complemental strand, 29039118 - 29038984
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagtta 113  Q
    ||||||||||| | || |||| ||||||||||||||||| |||||||||| || |||||||||||||| | ||   |||||||||||||||| ||| |||    
T  29039118 acatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatcttctttttgataatccattccataagaactctacattta 29039019  T
Q  114 agcgtgcttgacttggagtagctagtctttggatggatg 152  Q
    ||||||||||||||||||    |||||||||||||||||    
T  29039018 agcgtgcttgacttggag----tagtctttggatggatg 29038984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 29357553 - 29357434
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||   |||||||||||||||||||||  ||||||||| ||||||||||||||||||| |||| | || |||||||||| |||||||||    
T  29357553 catggttgaaggaatgtttataagaattgtttggtactaactatatcaacaagatgcatcttcttttcgatagcccgtttcataagaactacacagttaa 29357454  T
Q  115 gcgtgcttgacttggagtag 134  Q
     |||| ||||||| ||||||    
T  29357453 ccgtgtttgacttagagtag 29357434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 56 - 131
Target Start/End: Complemental strand, 13122561 - 13122486
Alignment:
Q  56 tatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgtgcttgacttggag 131  Q
    ||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  13122561 tatattaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgatttggag 13122486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 65 - 131
Target Start/End: Complemental strand, 7646525 - 7646459
Alignment:
Q  65 aagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgtgcttgacttggag 131  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  7646525 aagatgcatcttcttttcggtagctcattccataagaacttcacagttaagcgtgcttgacttggag 7646459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 31743921 - 31743834
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaa 102  Q
    ||||||||||||||  ||||||||||| ||||||| ||  ||||||||| |||||||||||||||||||||||| |||||||||||||    
T  31743921 catggttgaaggaatgcttataagaatggtttggtgctatctatatcaacaagatgcatcttcttttcggtagcccattccataagaa 31743834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 65 - 131
Target Start/End: Original strand, 7646514 - 7646580
Alignment:
Q  65 aagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgtgcttgacttggag 131  Q
    |||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  7646514 aagatgcatcttgttttcggtaactcattccataagaactccacagttaagcgtgcttgacttggag 7646580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 15 - 119
Target Start/End: Complemental strand, 36015508 - 36015404
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||  |||| ||||||||||||||||| | |||||||| ||||||| |||||||||   |||| ||||||||||||||| |||||||||    
T  36015508 catggttgaaggaaagcttaaaagaattgtttggtactacatatatcaacaagatgcctcttcttttaaatagcccattccataagaacttcacagttaa 36015409  T
Q  115 gcgtg 119  Q
     ||||    
T  36015408 acgtg 36015404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 43233463 - 43233534
Alignment:
Q  16 atggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtag 87  Q
    |||||| ||||||||||||||||||||||||||||||  ||||||||| |||||||||||| ||||||||||    
T  43233463 atggttaaaggaagacttataagaattgtttggtactatctatatcaacaagatgcatctttttttcggtag 43233534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 128
Target Start/End: Original strand, 20966100 - 20966213
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    |||| |||||||| |||||||||||||| ||| ||| | |||||| ||| |||||| || || ||||||||||| ||||||||||||||| |||||||||    
T  20966100 catgattgaaggatgacttataagaattattttgtaatacctataccaacaagatgtatattattttcggtagctcattccataagaacttcacagttaa 20966199  T
Q  115 gcgtgcttgacttg 128  Q
     | ||| |||||||    
T  20966200 acatgcatgacttg 20966213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 16 - 116
Target Start/End: Original strand, 11372501 - 11372601
Alignment:
Q  16 atggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaag 115  Q
    |||||||||||||| |||||||||||||||||||||| ||| || ||| | ||||||| || |||| |||||| ||  |||||||||||||| |||||||    
T  11372501 atggttgaaggaaggcttataagaattgtttggtactacctgtaccaacatgatgcatgttatttttggtagctcaaaccataagaactccaaagttaag 11372600  T
Q  116 c 116  Q
    |    
T  11372601 c 11372601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 15 - 119
Target Start/End: Original strand, 16192368 - 16192472
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    |||| ||||| ||||  ||||||||||||||||||| | |||| ||||| ||||||||||||| ||| |||||| |||||||||||||||  ||||| ||    
T  16192368 catgattgaatgaaggattataagaattgtttggtattacctacatcaacaagatgcatcttcgttttggtagcccattccataagaactatacagtgaa 16192467  T
Q  115 gcgtg 119  Q
    |||||    
T  16192468 gcgtg 16192472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 80 - 131
Target Start/End: Complemental strand, 43776322 - 43776271
Alignment:
Q  80 ttcggtagcacattccataagaactccacagttaagcgtgcttgacttggag 131  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  43776322 ttcggtagctcattccataagaactccacagttaagcgtgcttgacttggag 43776271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 15 - 115
Target Start/End: Original strand, 1628765 - 1628862
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||| ||| |||||||   ||||||||||||  | ||||||| |||||||||||||||||  | ||| ||| |||||||||||||| ||||||    
T  1628765 catggttgaagaaaggcttataa---ttgtttggtactatcgatatcaacaagatgcatcttcttttttgaagcccataccataagaactccatagttaa 1628861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 26957655 - 26957606
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaa 63  Q
    ||||||||||| |||| |||||||||||||||||||||| ||||||||||    
T  26957655 acatggttgaaagaaggcttataagaattgtttggtactacctatatcaa 26957606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 132
Target Start/End: Complemental strand, 7461424 - 7461331
Alignment:
Q  38 gaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgtgcttgacttggagt 132  Q
    |||||||||| ||||  |||||| || ||||| ||||||||||| |||||  ||||| |||||||||| ||||||||||||| || |||| ||||    
T  7461424 gaattgtttgatactaactatataaacaagatacatcttctttttggtagttcattc-ataagaactctacagttaagcgtgtttaacttagagt 7461331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 6585657 - 6585705
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaa 63  Q
    |||| ||||| |||||||||||| |||||||||||||| ||||||||||    
T  6585657 catgattgaaagaagacttataaaaattgtttggtactacctatatcaa 6585705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 11372948 - 11373060
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    |||||||||| |||||||| ||||||||||||  || |  ||||| ||| ||||||  |||||||||  |||||  |  ||||||||||| |||| ||||    
T  11372948 catggttgaatgaagacttgtaagaattgtttcatagtatctataccaacaagatgagtcttctttttcgtagcctaaaccataagaactacacaattaa 11373047  T
Q  115 gcgtgcttgactt 127  Q
    | |||||||||||    
T  11373048 gtgtgcttgactt 11373060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 83 - 134
Target Start/End: Complemental strand, 3305377 - 3305326
Alignment:
Q  83 ggtagcacattccataagaactccacagttaagcgtgcttgacttggagtag 134  Q
    |||||| |||| ||||| |||| ||||||||||||||||||| |||||||||    
T  3305377 ggtagctcattacataaaaacttcacagttaagcgtgcttgatttggagtag 3305326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 127
Target Start/End: Original strand, 37672226 - 37672321
Alignment:
Q  32 ttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgtgcttgactt 127  Q
    |||||| |||||||||||||| | | || ||| |||||||| |||||||| | |||   ||| |||||||| | |||||||||||||| |||||||    
T  37672226 ttataataattgtttggtactacttgtaccaacaagatgcaacttctttttgttagttgatttcataagaaatacacagttaagcgtgtttgactt 37672321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 187 - 221
Target Start/End: Original strand, 7646676 - 7646710
Alignment:
Q  187 agtcgacaatcctaaaagtcgtctgagatgttaca 221  Q
    ||||||||||||||||||||||||| |||||||||    
T  7646676 agtcgacaatcctaaaagtcgtctgggatgttaca 7646710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 13124798 - 13124761
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtact 52  Q
    ||||||||||||||| |||||||||||||| |||||||    
T  13124798 catggttgaaggaaggcttataagaattgtgtggtact 13124761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 2490088 - 2490140
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataag 67  Q
    |||| |||||||||  |||||||||| |||||| |||| ||||||||||||||    
T  2490088 catgattgaaggaatgcttataagaagtgtttgttactacctatatcaataag 2490140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 100; Significance: 3e-49; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 8 - 131
Target Start/End: Original strand, 8256568 - 8256691
Alignment:
Q  8 gggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactcca 107  Q
    ||||| |||||||||||||||| ||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  8256568 gggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactcca 8256667  T
Q  108 cagttaagcgtgcttgacttggag 131  Q
    ||||||||||||||||||||||||    
T  8256668 cagttaagcgtgcttgacttggag 8256691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 15 - 133
Target Start/End: Original strand, 16379442 - 16379560
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  16379442 catggttgaaggaagacttatacgaattgtttggtactacctatatcaacaagatgcatcttctttttggtagcacattccataagaactccacagttaa 16379541  T
Q  115 gcgtgcttgacttggagta 133  Q
    ||||| |||||||||||||    
T  16379542 gcgtgtttgacttggagta 16379560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 41754338 - 41754454
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||| ||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  41754338 catggttgaaggaaggcttataagaattgtttggtactatctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 41754437  T
Q  115 gcgtgcttgacttggag 131  Q
    |||||||||||||||||    
T  41754438 gcgtgcttgacttggag 41754454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 16378986 - 16379105
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||| |||||| |||||||||| |||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  16378986 catggttgaaggaagtcttatacgaattgtttgatactacctatatcaacaagatgcatcttctttttggtagcacattccataagaactccacagttaa 16379085  T
Q  115 gcgtgcttgacttggagtag 134  Q
    ||||||||||||||||||||    
T  16379086 gcgtgcttgacttggagtag 16379105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 19 - 134
Target Start/End: Original strand, 33174556 - 33174671
Alignment:
Q  19 gttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgt 118  Q
    ||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  33174556 gttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagcccattccataagaactccgcagttaagcgt 33174655  T
Q  119 gcttgacttggagtag 134  Q
    ||||||||||||||||    
T  33174656 gcttgacttggagtag 33174671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 8 - 128
Target Start/End: Original strand, 29804724 - 29804844
Alignment:
Q  8 gggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactcca 107  Q
    ||||| ||||||||||||| || ||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  29804724 gggactacatggttgaaggcaggcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactcca 29804823  T
Q  108 cagttaagcgtgcttgacttg 128  Q
    |||||||||||||||||||||    
T  29804824 cagttaagcgtgcttgacttg 29804844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 30966739 - 30966855
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    |||||||||||||||  ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  30966739 catggttgaaggaaggattataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 30966838  T
Q  115 gcgtgcttgacttggag 131  Q
    |||||||| ||||||||    
T  30966839 gcgtgcttaacttggag 30966855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 15 - 130
Target Start/End: Original strand, 30966283 - 30966398
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||| | |||||||||||||||||| ||||||    
T  30966283 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtatctcattccataagaactccatagttaa 30966382  T
Q  115 gcgtgcttgacttgga 130  Q
    ||||||||||||||||    
T  30966383 gcgtgcttgacttgga 30966398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 8 - 133
Target Start/End: Original strand, 33175000 - 33175124
Alignment:
Q  8 gggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactcca 107  Q
    ||||| |||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||| |||| |||||||||||||    
T  33175000 gggactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagctcatttcataagaactcca 33175099  T
Q  108 cagttaagcgtgcttgacttggagta 133  Q
    |||||||||||| |||||||||||||    
T  33175100 cagttaagcgtg-ttgacttggagta 33175124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 24818375 - 24818491
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||| ||||||| |||||||||||||||| ||||| |||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  24818375 catggttcaaggaaggcttataagaattgtttagtactacctatatcaacaagatgcatctttttttcggtagctcattccataagaactccacagttaa 24818474  T
Q  115 gcgtgcttgacttggag 131  Q
    |||||||||||||||||    
T  24818475 gcgtgcttgacttggag 24818491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 25338094 - 25337978
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||| ||||||||||||||| |||||| |||||||||| ||||||||||||||||||| |||| |||| ||||||||||||||||||||    
T  25338094 catggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcgatagctcatttcataagaactccacagttaa 25337995  T
Q  115 gcgtgcttgacttggag 131  Q
    |||||||||||||||||    
T  25337994 gcgtgcttgacttggag 25337978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 11388236 - 11388352
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagtta 113  Q
    |||||||||||||||  |||| || |||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  11388236 acatggttgaaggaatgcttaaaa-aattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagtta 11388334  T
Q  114 agcgtgcttgacttggag 131  Q
    ||||||||||||||||||    
T  11388335 agcgtgcttgacttggag 11388352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 18 - 131
Target Start/End: Original strand, 33771053 - 33771166
Alignment:
Q  18 ggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagcg 117  Q
    |||||||| ||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||     
T  33771053 ggttgaagaaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcatttcataagaactccacagttaagca 33771152  T
Q  118 tgcttgacttggag 131  Q
    ||||||||||||||    
T  33771153 tgcttgacttggag 33771166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 14 - 133
Target Start/End: Original strand, 1912573 - 1912691
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagtta 113  Q
    ||||||||||| | ||| ||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  1912573 acatggttgaaagtagatttataagaattgtttggtactacctatatcaacaagatgcatcttctttt-ggtagcccattccataagaactccacagtta 1912671  T
Q  114 agcgtgcttgacttggagta 133  Q
    |||||| |||||||||||||    
T  1912672 agcgtgattgacttggagta 1912691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 5399913 - 5399798
Alignment:
Q  16 atggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaag 115  Q
    |||||| |||| || |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||| || |||||||    
T  5399913 atggtttaagggaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaacttcatagttaag 5399814  T
Q  116 cgtgcttgacttggag 131  Q
    ||||||||||||||||    
T  5399813 cgtgcttgacttggag 5399798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 14 - 134
Target Start/End: Original strand, 1707089 - 1707209
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagtta 113  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||| |||  |||||||||||||||||||    
T  1707089 acatgattgaaggaagacttataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagcccatctcataagaactccacagtta 1707188  T
Q  114 agcgtgcttgacttggagtag 134  Q
    || ||| |||||||| |||||    
T  1707189 agagtgtttgacttgaagtag 1707209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 38899010 - 38898890
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagtta 113  Q
    ||||||||||||||   |||||||||||||||||||||| |||||||||| ||||||||| ||||||| |||| |||||| |||||||||||||||||||    
T  38899010 acatggttgaaggagagcttataagaattgtttggtactacctatatcaacaagatgcattttctttttggtaacacatttcataagaactccacagtta 38898911  T
Q  114 agcgtgcttgacttggagtag 134  Q
    |||||||||||||| ||||||    
T  38898910 agcgtgcttgacttagagtag 38898890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 25434153 - 25434036
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||| ||||||||||||||||| |||  ||| |||||| ||||||||||| ||||  |||||| |||||||||||||||||||||||||    
T  25434153 catggttgaaggaaggcttataagaattgtttgatacaacctttatcaacaagatgcatctcctttctggtagcccattccataagaactccacagttaa 25434054  T
Q  115 gcgtgcttgacttggagt 132  Q
    ||||||||||||||||||    
T  25434053 gcgtgcttgacttggagt 25434036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 11394583 - 11394698
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagtta 113  Q
    |||||||||||||||  |||| || |||||||||||||| |||||||||| ||||||||||||||||||||||||  |||||||||||||| ||||||||    
T  11394583 acatggttgaaggaatgcttaaaa-aattgtttggtactacctatatcaacaagatgcatcttcttttcggtagc-tattccataagaacttcacagtta 11394680  T
Q  114 agcgtgcttgacttggag 131  Q
    ||||||||||||||||||    
T  11394681 agcgtgcttgacttggag 11394698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 15 - 127
Target Start/End: Complemental strand, 29259717 - 29259605
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||| ||||| | |||||||||||||| | |||||||| |||||||||||||||||||||||| |||| |||||||||| || ||||||    
T  29259717 catggttgaaggaaggcttattaaaattgtttggtactacatatatcaacaagatgcatcttcttttcggtagctcatttcataagaacttcatagttaa 29259618  T
Q  115 gcgtgcttgactt 127  Q
    |||||||||||||    
T  29259617 gcgtgcttgactt 29259605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 14 - 116
Target Start/End: Complemental strand, 18098976 - 18098874
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagtta 113  Q
    ||||||||||||| |  |||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||| |||||||||||||||||| |||||    
T  18098976 acatggttgaagggatgcttataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagctcattccataagaactccatagtta 18098877  T
Q  114 agc 116  Q
    |||    
T  18098876 agc 18098874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 15 - 129
Target Start/End: Complemental strand, 30963817 - 30963703
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    |||||||||||||| ||||||||||||||| |||| || |||||||||| ||||||||||||||||  |||||| ||  |||||| ||||||||||||||    
T  30963817 catggttgaaggaaaacttataagaattgtatggttctacctatatcaacaagatgcatcttctttctggtagcccaaaccataataactccacagttaa 30963718  T
Q  115 gcgtgcttgacttgg 129  Q
    |||||||||||||||    
T  30963717 gcgtgcttgacttgg 30963703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 19 - 168
Target Start/End: Complemental strand, 27883019 - 27882874
Alignment:
Q  19 gttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgt 118  Q
    ||||||||||  |||||||||||||||||||| |  |||||||||||||||||||||||||||  ||||  | |||||||||||||||||| ||||||||    
T  27883019 gttgaaggaatgcttataagaattgtttggtattatctatatcaataagatgcatcttcttttttgtaggccgttccataagaactccacaattaagcgt 27882920  T
Q  119 gcttgacttggagtagctagtctttggatggatggccttctgagaagttt 168  Q
    | |||||||||||    |||||||||||| | || ||| |||||||||||    
T  27882919 gtttgacttggag----tagtctttggataggtgacctactgagaagttt 27882874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 31 - 169
Target Start/End: Original strand, 15619963 - 15620097
Alignment:
Q  31 cttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgtgcttgacttgga 130  Q
    |||||||||||||||||||||| |||||||||| ||||| ||||||||||| || | | || ||||||||||||||||| ||||||||||||||||| ||    
T  15619963 cttataagaattgtttggtactacctatatcaacaagatacatcttctttttggaaacccaatccataagaactccacaattaagcgtgcttgactttga 15620062  T
Q  131 gtagctagtctttggatggatggccttctgagaagtttc 169  Q
    |    |||||||||||||| || ||| ||| ||||||||    
T  15620063 g----tagtctttggatgggtgacctactgggaagtttc 15620097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 30963360 - 30963244
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    |||| |||||||||| ||||||||||||||| |||||| |||||||||| |||||||||||| |||| |||||| ||   |||||||| || ||||||||    
T  30963360 catgattgaaggaaggcttataagaattgttaggtactacctatatcaacaagatgcatcttatttttggtagcccaaatcataagaattcaacagttaa 30963261  T
Q  115 gcgtgcttgacttggag 131  Q
    |||||||||||||||||    
T  30963260 gcgtgcttgacttggag 30963244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 128
Target Start/End: Original strand, 13191023 - 13191136
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||| |||||||||||||||||||||||||||||| | |||| ||| ||||||||||||||||| |||||  ||||  |||||||||||| |||||     
T  13191023 catggttcaaggaagacttataagaattgtttggtactacatataccaacaagatgcatcttctttttggtagtccattttataagaactccatagttat 13191122  T
Q  115 gcgtgcttgacttg 128  Q
    | ||||||||||||    
T  13191123 gtgtgcttgacttg 13191136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 83065 - 83181
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagtta 113  Q
    ||||||||||||| |  ||||||||||| |||||||||| |||||| ||| |||||| ||||| |||| |||||| |||||||||||||||| |||||||    
T  83065 acatggttgaaggtatgcttataagaatcgtttggtactacctataccaacaagatgaatcttttttttggtagctcattccataagaactctacagtta 83164  T
Q  114 agcgtgcttgacttgga 130  Q
    |||||| |||| |||||    
T  83165 agcgtgtttgatttgga 83181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 8073944 - 8074055
Alignment:
Q  18 ggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagcg 117  Q
    ||||||||| ||||||||||||||||||||||||| |||||| ||| ||||||||||||||||   ||||| |||| ||||||||||||| || |||||     
T  8073944 ggttgaagggagacttataagaattgtttggtactacctataccaacaagatgcatcttctttcttgtagcccatttcataagaactccatagataagcc 8074043  T
Q  118 tgcttgacttgg 129  Q
    | ||||||||||    
T  8074044 ttcttgacttgg 8074055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 31 - 169
Target Start/End: Original strand, 15639799 - 15639933
Alignment:
Q  31 cttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgtgcttgacttgga 130  Q
    |||||| ||||||||||||||| |||||||||| || || ||||||||||| || | | || |||| |||||||||||| ||||||||||||||||||||    
T  15639799 cttataggaattgtttggtactacctatatcaacaacatacatcttctttttggaaacccaatccacaagaactccacaattaagcgtgcttgacttgga 15639898  T
Q  131 gtagctagtctttggatggatggccttctgagaagtttc 169  Q
    |    |||||||||||||| || ||| ||| ||||||||    
T  15639899 g----tagtctttggatgggtgacctactgggaagtttc 15639933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 23 - 127
Target Start/End: Complemental strand, 30961972 - 30961868
Alignment:
Q  23 aaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgtgctt 122  Q
    ||||||| ||||||||| ||| |||||||| |||||||||| ||||||||| || |||||||||||  |  ||||||||||||||||||||| |||||||    
T  30961972 aaggaagtcttataagatttgattggtactacctatatcaacaagatgcatatttttttcggtagccgaaaccataagaactccacagttaaacgtgctt 30961873  T
Q  123 gactt 127  Q
    |||||    
T  30961872 gactt 30961868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 20502072 - 20502176
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||| ||||||||||||||||||||||  ||||||||| ||||||| |||| |||| |||||| |||| |||||||||| |||| ||||    
T  20502072 catggttgaaggaaggcttataagaattgtttggtactttctatatcaacaagatgcttctt-tttttggtagcccatttcataagaacttcacaattaa 20502170  T
Q  115 gcgtgc 120  Q
     |||||    
T  20502171 acgtgc 20502176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 15 - 87
Target Start/End: Original strand, 1953204 - 1953276
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtag 87  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||  |||||||||||||||| |||||    
T  1953204 catggttgaaggaagacctataagaattgtttggtactacctatatcaactagatgcatcttctttttggtag 1953276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 16542033 - 16542151
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcgg-tagcacattccataagaactccacagtt 112  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||| |||||| ||||| ||||    |||| |||||||||| ||||| ||||||    
T  16542033 acatggttgaaggaagacttataataattgttttgtactacctatatcaacaagatgtatcttttttttttatagctcattccataaaaactctacagtt 16542132  T
Q  113 aagcgtgcttgacttggag 131  Q
    ||  ||| |||||||||||    
T  16542133 aaatgtgtttgacttggag 16542151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 72 - 131
Target Start/End: Complemental strand, 32377756 - 32377697
Alignment:
Q  72 atcttcttttcggtagcacattccataagaactccacagttaagcgtgcttgacttggag 131  Q
    ||||| ||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||    
T  32377756 atcttgttttcggtagctcattccaaaagaactccacagttaagcatgcttgacttggag 32377697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 28 - 127
Target Start/End: Original strand, 37552629 - 37552726
Alignment:
Q  28 agacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgtgcttgactt 127  Q
    ||||||||||||||||||||||||| | |||| ||| | ||||| ||||||||| || ||| |||||| |||||| ||||||||||||| ||||||||||    
T  37552629 agacttataagaattgtttggtactacatata-caaaatgatgc-tcttctttttggcagcgcattccgtaagaattccacagttaagcatgcttgactt 37552726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 76
Target Start/End: Complemental strand, 18448016 - 18447954
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatctt 76  Q
    |||||||||||| |||||||||||||||||||||||||| | | |||||| ||||||||||||    
T  18448016 acatggttgaagtaagacttataagaattgtttggtactacttgtatcaacaagatgcatctt 18447954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 8181446 - 8181394
Alignment:
Q  17 tggttgaaggaagacttataagaattgtttggtactgcctatatcaataagat 69  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||| |||||    
T  8181446 tggttgaaggaagacttttaagaattgtttggtactacctatatcaacaagat 8181394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 36924519 - 36924453
Alignment:
Q  17 tggttgaaggaagacttataagaattgtttggtactgc--ctatatcaataagatgcatcttctttt 81  Q
    ||||||||||||| |||||||||||||||||||| | |   |||||||| |||||||||||||||||    
T  36924519 tggttgaaggaaggcttataagaattgtttggtattacttatatatcaacaagatgcatcttctttt 36924453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 131
Target Start/End: Complemental strand, 32377921 - 32377888
Alignment:
Q  98 aagaactccacagttaagcgtgcttgacttggag 131  Q
    |||||||||||||||||||||| |||||||||||    
T  32377921 aagaactccacagttaagcgtgtttgacttggag 32377888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 97; Significance: 2e-47; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 1269 - 1385
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  1269 catggttgaaggaaggcttataagaattgtttggtactacctatataaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 1368  T
Q  115 gcgtgcttgacttggag 131  Q
    |||||||||||||||||    
T  1369 gcgtgcttgacttggag 1385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 97; Significance: 2e-47; HSPs: 4)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 162775 - 162659
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  162775 catggttgaaggaagacttataagaattgtttggtactacctatattaacaagatgcatcttcttttcggtagctcattccataagaactccgcagttaa 162676  T
Q  115 gcgtgcttgacttggag 131  Q
    |||||||||||||||||    
T  162675 gcgtgcttgacttggag 162659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 168
Target Start/End: Complemental strand, 69908 - 69763
Alignment:
Q  19 gttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgt 118  Q
    ||||||||||  ||||||| |||||||||||||| |||||||||| | |||||||||| |||||  |||| |||||||||||||||||||||||| |||     
T  69908 gttgaaggaatgcttataataattgtttggtactacctatatcaacatgatgcatctttttttcattagctcattccataagaactccacagttatgcgg 69809  T
Q  119 gcttgacttggagtagctagtctttggatggatggccttctgagaagttt 168  Q
    |||||||| ||||    |||||||||||||| || ||||| | |||||||    
T  69808 gcttgactaggag----tagtctttggatgggtgaccttcagggaagttt 69763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 65 - 131
Target Start/End: Complemental strand, 163181 - 163115
Alignment:
Q  65 aagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgtgcttgacttggag 131  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  163181 aagatgcatcttgttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggag 163115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 65 - 131
Target Start/End: Original strand, 163170 - 163236
Alignment:
Q  65 aagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgtgcttgacttggag 131  Q
    |||||||||||||||||||||||| |||||  |||||| ||||||||||||||||||||||||||||    
T  163170 aagatgcatcttcttttcggtagctcattctttaagaattccacagttaagcgtgcttgacttggag 163236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 96; Significance: 7e-47; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 8 - 131
Target Start/End: Original strand, 2784 - 2907
Alignment:
Q  8 gggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactcca 107  Q
    ||||| |||||||||||||||| ||||||||||||||| |||||| |||||||||| ||||||||| |||||||||||||| ||||||||||||||||||    
T  2784 gggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatattcttttcggtagctcattccataagaactcca 2883  T
Q  108 cagttaagcgtgcttgacttggag 131  Q
    ||||||||||||||||||||||||    
T  2884 cagttaagcgtgcttgacttggag 2907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 96; Significance: 7e-47; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 14 - 133
Target Start/End: Complemental strand, 6331010 - 6330891
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagtta 113  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||| |||| |||||||||||||||||||    
T  6331010 acatggttgaaggaagacttataagaattgtttggtactacctatatcaacaatatgcatcttcttttcggtagctcatttcataagaactccacagtta 6330911  T
Q  114 agcgtgcttgacttggagta 133  Q
    |||||||||||||| |||||    
T  6330910 agcgtgcttgactttgagta 6330891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 7911927 - 7912043
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||     
T  7911927 catggttgaaggaaaacttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttat 7912026  T
Q  115 gcgtgcttgacttggag 131  Q
    || ||||||||||||||    
T  7912027 gcttgcttgacttggag 7912043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 14 - 134
Target Start/End: Original strand, 11062333 - 11062453
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagtta 113  Q
    |||||||||||||||| |||||||||| ||||| ||||| |||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  11062333 acatggttgaaggaaggcttataagaagtgttttgtactacctatatcaacaagatgcatcttctttttggtagcccattccataagaactccacagtta 11062432  T
Q  114 agcgtgcttgacttggagtag 134  Q
    |||||||||||||||||||||    
T  11062433 agcgtgcttgacttggagtag 11062453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 13191610 - 13191494
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| | ||||||||||||| |||||||||    
T  13191610 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcgttccataagaacttcacagttaa 13191511  T
Q  115 gcgtgcttgacttggag 131  Q
    |||||||||||||||||    
T  13191510 gcgtgcttgacttggag 13191494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 13492838 - 13492950
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||| ||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  13492838 catggttgaaggaaggcttataataattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 13492937  T
Q  115 gcgtgcttgactt 127  Q
    |||||||||||||    
T  13492938 gcgtgcttgactt 13492950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 17027628 - 17027512
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||| |||| ||||||||||||||||||||    
T  17027628 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagattcatcttcttttcggtagctcatttcataagaactccacagttaa 17027529  T
Q  115 gcgtgcttgacttggag 131  Q
    |||||||||||||||||    
T  17027528 gcgtgcttgacttggag 17027512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 20850370 - 20850486
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||| |||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  20850370 catggttgaaggaaggcttataagaattgttttgtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactctacagttaa 20850469  T
Q  115 gcgtgcttgacttggag 131  Q
    |||||||||||||||||    
T  20850470 gcgtgcttgacttggag 20850486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 16520016 - 16520133
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagtta 113  Q
    ||||||| |||||||| ||||| ||| |||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  16520016 acatggtcgaaggaaggcttatgagatttgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagtta 16520115  T
Q  114 agcgtgcttgacttggag 131  Q
    ||||||||||||||||||    
T  16520116 agcgtgcttgacttggag 16520133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 20896786 - 20896669
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagtta 113  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||| ||||||||||||||||||| ||||    
T  20896786 acatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcagtagctcattccataagaactccacggtta 20896687  T
Q  114 agcgtgcttgacttggag 131  Q
    |||||||||| |||||||    
T  20896686 agcgtgcttggcttggag 20896669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 20126280 - 20126160
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagtta 113  Q
    |||||||||||||||| ||||||||||| ||||| |||| |||||||||| ||||||||||||||||| |||||||||||||||||||| |||||| |||    
T  20126280 acatggttgaaggaaggcttataagaatggtttgatactacctatatcaacaagatgcatcttctttttggtagcacattccataagaattccacaatta 20126181  T
Q  114 agcgtgcttgacttggagtag 134  Q
    |||||||||||||||||||||    
T  20126180 agcgtgcttgacttggagtag 20126160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 9352110 - 9352227
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagtta 113  Q
    ||||||| ||||| |||||||||| | |||||||||||| ||||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9352110 acatggtcgaagggagacttataatatttgtttggtactacctatataaacaagatgcatcttcttttcggtagctcattccataagaactccacagtta 9352209  T
Q  114 agcgtgcttgacttggag 131  Q
    ||||||||||||||||||    
T  9352210 agcgtgcttgacttggag 9352227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 7912359 - 7912475
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    |||||||||||||| ||||||| ||||||||||||||| |||||||||| ||||||||| |||||||||||||| |||||||||||||||||| ||||||    
T  7912359 catggttgaaggaaaacttatatgaattgtttggtactacctatatcaacaagatgcattttcttttcggtagctcattccataagaactccatagttaa 7912458  T
Q  115 gcgtgcttgacttggag 131  Q
     ||||||||||||||||    
T  7912459 acgtgcttgacttggag 7912475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 15 - 122
Target Start/End: Complemental strand, 2681313 - 2681206
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    |||||||||| ||||||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  2681313 catggttgaatgaagacttataagaattgtttggtactacccatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacaattaa 2681214  T
Q  115 gcgtgctt 122  Q
    ||||||||    
T  2681213 gcgtgctt 2681206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 8 - 131
Target Start/End: Original strand, 23776483 - 23776605
Alignment:
Q  8 gggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactcca 107  Q
    ||||| |||||||||||||||||||||||||||| || ||||||| |||||||||| |||||||||||||||||||||||| |||| |||||||||| ||    
T  23776483 gggactacatggttgaaggaagacttataagaatcgtctggtactacctatatcaacaagatgcatcttcttttcggtagctcatttcataagaacttca 23776582  T
Q  108 cagttaagcgtgcttgacttggag 131  Q
    || |||||||| ||||||||||||    
T  23776583 ca-ttaagcgtacttgacttggag 23776605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 8 - 131
Target Start/End: Complemental strand, 23986421 - 23986298
Alignment:
Q  8 gggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactcca 107  Q
    ||||| ||||||||||||| || |||||||||||||||||||||| ||||||| || |||||||||||||||||||||||| ||  ||||||||||| ||    
T  23986421 gggactacatggttgaaggtaggcttataagaattgtttggtactacctatatgaacaagatgcatcttcttttcggtagctcaaaccataagaacttca 23986322  T
Q  108 cagttaagcgtgcttgacttggag 131  Q
    |||||||| |||||||||||||||    
T  23986321 cagttaagtgtgcttgacttggag 23986298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 9 - 119
Target Start/End: Original strand, 15929625 - 15929735
Alignment:
Q  9 ggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccac 108  Q
    |||| ||||||||||| |||| |||||||||||| ||||||||| |||||||||| || ||||||||||||||||||||| |||||||||||||||||||    
T  15929625 ggactacatggttgaatgaaggcttataagaattatttggtactacctatatcaacaaaatgcatcttcttttcggtagctcattccataagaactccac 15929724  T
Q  109 agttaagcgtg 119  Q
    |||||||||||    
T  15929725 agttaagcgtg 15929735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 15 - 128
Target Start/End: Complemental strand, 2890936 - 2890823
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    |||||||||||||||  |||||||||||||| || ||| |||||||||| ||||||| |||||||||| ||||| |||||||||||||||||||||||||    
T  2890936 catggttgaaggaaggtttataagaattgttagggactacctatatcaaaaagatgcttcttcttttcagtagcccattccataagaactccacagttaa 2890837  T
Q  115 gcgtgcttgacttg 128  Q
    ||||||||||||||    
T  2890836 gcgtgcttgacttg 2890823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 2720661 - 2720541
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttc-ggtagcacattccataagaactccacagtta 113  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| || ||||  |||||| ||||  |||||| ||||||||||||||||||||||||    
T  2720661 catggttgaaggaagacttataagaattgtttggtactacctatattaacaagacacatctttttttttggtagctcattccataagaactccacagtta 2720562  T
Q  114 agcgtgcttgacttggagtag 134  Q
    || ||||||||||||||||||    
T  2720561 agtgtgcttgacttggagtag 2720541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 31 - 131
Target Start/End: Original strand, 13492397 - 13492497
Alignment:
Q  31 cttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgtgcttgacttgga 130  Q
    ||||||||||||||||| || | |||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  13492397 cttataagaattgtttgatattacctatatcaacaagatgcatcttcttttcggtagctaattccataagaactccacagttaagcgtgcttgacttgga 13492496  T
Q  131 g 131  Q
    |    
T  13492497 g 13492497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 21312020 - 21312136
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||| ||||||||||||||| |||||| |||||||||| ||||||||||||||||| |||||| |||| |||||||| |||| ||||||    
T  21312020 catggttgaaggaaggcttataagaattgttaggtactacctatatcaacaagatgcatcttctttttggtagcccatttcataagaaatccatagttaa 21312119  T
Q  115 gcgtgcttgacttggag 131  Q
     ||||||||||||||||    
T  21312120 acgtgcttgacttggag 21312136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 17731210 - 17731090
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagat----gcatcttcttttcggtagcacattccataagaactccacag 110  Q
    ||||||| |||||||||||||||||||||||||||||| |||||||||| |||||    ||||||||||||||||||| |||||  |||||||||||||     
T  17731210 catggttaaaggaagacttataagaattgtttggtactacctatatcaacaagatagatgcatcttcttttcggtagctcattctttaagaactccacat 17731111  T
Q  111 ttaagcgtgcttgacttggag 131  Q
    |||||||||||||||||||||    
T  17731110 ttaagcgtgcttgacttggag 17731090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 14771816 - 14771697
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||| ||||||| ||||    ||||||||||||||||||||||||    
T  14771816 catggttgaaggaagacttataagaattgtttggtactacctatatcaacaagatccatattctttttggtaatctattccataagaactccacagttaa 14771717  T
Q  115 gcgtgcttgacttggagtag 134  Q
    | ||||| ||| ||||||||    
T  14771716 gtgtgctagacgtggagtag 14771697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 17851423 - 17851542
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||| || |||| |||||||||  ||||||||||| ||| |||||| ||||||||||||||||| |||||| ||||| |||||||||||||| ||||    
T  17851423 catggttaaaagaaggcttataagatatgtttggtactacctttatcaacaagatgcatcttctttttggtagcccattctataagaactccacaattaa 17851522  T
Q  115 gcgtgcttgacttggagtag 134  Q
    ||||||||||||||||||||    
T  17851523 gcgtgcttgacttggagtag 17851542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 21311564 - 21311683
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||| |||||||||||||||||||| | |||| || || ||||| ||||||||||| || ||| ||||||||||||||||| |||||||    
T  21311564 catggttgaaggaagccttataagaattgtttggtattacctagataaacaagatccatcttctttttggaagctcattccataagaactccgcagttaa 21311663  T
Q  115 gcgtgcttgacttggagtag 134  Q
    ||||||||||||| ||||||    
T  21311664 gcgtgcttgactttgagtag 21311683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 3652528 - 3652634
Alignment:
Q  8 gggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactcca 107  Q
    ||||| |||||||||||||||| |||||||||||||| || |||| |||||||||| ||||||||||||||||| |||||  ||||||||||||||||||    
T  3652528 gggactacatggttgaaggaaggcttataagaattgtctgatactacctatatcaacaagatgcatcttctttttggtagttcattccataagaactcca 3652627  T
Q  108 cagttaa 114  Q
    |||||||    
T  3652628 cagttaa 3652634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 14 - 134
Target Start/End: Original strand, 20732626 - 20732746
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagtta 113  Q
    ||||||||| |||||| |||||||||||| ||||||||| ||||||| ||||| |||||| |||||||||||||| ||||| |||| ||||| || ||||    
T  20732626 acatggttgtaggaaggcttataagaattatttggtactacctatattaataatatgcatattcttttcggtagcccattcaataaaaactctacggtta 20732725  T
Q  114 agcgtgcttgacttggagtag 134  Q
    || ||||||||||||||||||    
T  20732726 agagtgcttgacttggagtag 20732746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 15 - 106
Target Start/End: Original strand, 27334210 - 27334301
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactcc 106  Q
    ||||||||||||||  |||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||| |||||||||||||||||    
T  27334210 catggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgaatcttcttttcggtagctcattccataagaactcc 27334301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 15 - 106
Target Start/End: Original strand, 27394950 - 27395041
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactcc 106  Q
    ||||||||||||||  |||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||| |||||||||||||||||    
T  27394950 catggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgaatcttcttttcggtagctcattccataagaactcc 27395041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 9440406 - 9440290
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    |||||||||| |||  ||||||||||||||| |||||| | |||||||| ||||||||| |||||||||||||| || |||||||||||| |||||||||    
T  9440406 catggttgaatgaaagcttataagaattgttcggtactacttatatcaacaagatgcattttcttttcggtagctcactccataagaacttcacagttaa 9440307  T
Q  115 gcgtgcttgacttggag 131  Q
    | |||||||| ||||||    
T  9440306 gtgtgcttgatttggag 9440290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 42 - 134
Target Start/End: Original strand, 17850994 - 17851086
Alignment:
Q  42 tgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgtgcttgacttggagtag 134  Q
    ||||||||||| ||| |||||| ||||||||||||||||  |||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  17850994 tgtttggtactacctttatcaacaagatgcatcttctttctggtagcccattctataagaactccacagttaagcgtgcttgacttggagtag 17851086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 15929251 - 15929338
Alignment:
Q  18 ggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactc 105  Q
    |||||||| ||  |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  15929251 ggttgaagaaaagcttataagaattgtttggtaatgcctatatcaataagatgcatattcttttcggtagctcattccataagaactc 15929338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 15 - 168
Target Start/End: Complemental strand, 33775101 - 33774950
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataaga--tgcatcttcttttcggtagcacattccataagaactccacagtt 112  Q
    |||||||||||||||  ||||||||||||| |||| || |||||||||| ||||  ||||||||||||| | |||  |||||||||||||||||||||||    
T  33775101 catggttgaaggaaggattataagaattgtctggtgctacctatatcaacaagagatgcatcttctttttgatagtccattccataagaactccacagtt 33775002  T
Q  113 aagcgtgcttgacttggagtagctagtctttggatggatggccttctgagaagttt 168  Q
    ||| ||| |||||||| ||    |||||||||||||| || ||| |||||||||||    
T  33775001 aagtgtgtttgacttgcag----tagtctttggatgggtgacctactgagaagttt 33774950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 14 - 135
Target Start/End: Original strand, 20735743 - 20735864
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagtta 113  Q
    ||||| ||| |||||| ||||||||||||||||| |||| | |||||||| |||||||||||||||||||||||  ||||| |||| ||||||| |||||    
T  20735743 acatgattgtaggaaggcttataagaattgtttgatactacttatatcaacaagatgcatcttcttttcggtagtccattctataaaaactccatagtta 20735842  T
Q  114 agcgtgcttgacttggagtagc 135  Q
    || ||| ||| |||||||||||    
T  20735843 agtgtggttggcttggagtagc 20735864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 62 - 131
Target Start/End: Original strand, 28780206 - 28780275
Alignment:
Q  62 aataagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgtgcttgacttggag 131  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  28780206 aataagatgcatcttgttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggag 28780275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 14 - 127
Target Start/End: Complemental strand, 9440955 - 9440842
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagtta 113  Q
    |||||||||||||||  |||||||||||| ||||||||| | | |||||| ||||||||| |||||||| ||||| ||  ||||||||||| ||||||||    
T  9440955 acatggttgaaggaatgcttataagaattctttggtactacttttatcaacaagatgcattttcttttcagtagcccaaaccataagaacttcacagtta 9440856  T
Q  114 agcgtgcttgactt 127  Q
    || ||| |||||||    
T  9440855 agtgtgtttgactt 9440842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 15 - 133
Target Start/End: Original strand, 17205388 - 17205505
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    |||| ||||| ||||| ||||||||||||||||||||| ||| || ||| ||||| |||||| |||| |||||| ||||||||||||||||||  |||||    
T  17205388 catgattgaatgaagaattataagaattgtttggtactacctttaccaacaagattcatcttgtttt-ggtagcccattccataagaactccattgttaa 17205486  T
Q  115 gcgtgcttgacttggagta 133  Q
     | ||||||| ||||||||    
T  17205487 acatgcttgatttggagta 17205505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 14 - 100
Target Start/End: Complemental strand, 31821790 - 31821704
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataag 100  Q
    |||||||||||||||  |||||||||||| |||||||||  ||||||||| |||||||||||| |||| |||||| |||||||||||    
T  31821790 acatggttgaaggaatgcttataagaattatttggtactaactatatcaacaagatgcatcttttttttggtagctcattccataag 31821704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 14 - 168
Target Start/End: Original strand, 1991601 - 1991751
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagtta 113  Q
    ||||||||| | |||| |||| ||||||||||||||| | | ||| | || |||||||||||||||||||||||| |||| |||||||||| ||||||||    
T  1991601 acatggttggaagaaggcttacaagaattgtttggtattacatatctaaacaagatgcatcttcttttcggtagctcatttcataagaacttcacagtta 1991700  T
Q  114 agcgtgcttgacttggagtagctagtctttggatggatggccttctgagaagttt 168  Q
    | | |  |||| ||||||    |||| ||||||||| || |||||||| ||||||    
T  1991701 aacattattgatttggag----tagtttttggatgggtgaccttctgaaaagttt 1991751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 28583013 - 28583127
Alignment:
Q  16 atggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaag 115  Q
    ||||||||| |||| |||||||||||| |||| |||   ||||||||| |||||||||| ||||| ||||||  ||||||||||||| ||||||| ||||    
T  28583013 atggttgaatgaaggcttataagaattatttgatacgatctatatcaacaagatgcatcatctttccggtagttcattccataagaaatccacagctaag 28583112  T
Q  116 cgtgcttgacttgga 130  Q
     || |||||| ||||    
T  28583113 tgtccttgacatgga 28583127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 32292934 - 32293044
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    |||||||||| |||| |||||||||||||||||||||| |||||| ||| || || |||||| ||||  ||| ||||||  |||||||||||| ||||||    
T  32292934 catggttgaatgaaggcttataagaattgtttggtactacctataccaacaaaatacatcttgtttttagtaacacatt--ataagaactccatagttaa 32293031  T
Q  115 gcgtgcttgactt 127  Q
    |||  ||||||||    
T  32293032 gcgaacttgactt 32293044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 31 - 127
Target Start/End: Complemental strand, 28065919 - 28065820
Alignment:
Q  31 cttataagaattgtttggtactgcctatatcaataagatgcatc---ttcttttcggtagcacattccataagaactccacagttaagcgtgcttgactt 127  Q
    ||||||||||||||||||||||  || |||||| ||||||||||   || |||| ||||||  ||||||||||||||||||| |||||| || |||||||    
T  28065919 cttataagaattgtttggtactatctctatcaacaagatgcatctttttttttttggtagcttattccataagaactccacaattaagcatgtttgactt 28065820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 12194378 - 12194493
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    |||| |||||| ||||||||||| | || ||||| |||  ||||||||| |||||||||||||||||   ||   |||||||||||||||||||||||||    
T  12194378 catgattgaagaaagacttataa-atttttttggcactatctatatcaacaagatgcatcttcttttttataattcattccataagaactccacagttaa 12194476  T
Q  115 gcgtgcttgacttggag 131  Q
    || || ||||| |||||    
T  12194477 gcatgtttgacatggag 12194493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 134
Target Start/End: Complemental strand, 2891340 - 2891271
Alignment:
Q  65 aagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgtgcttgacttggagtag 134  Q
    ||||||||||||  ||| |||||| |||||||||| ||||||||||||||  |||||||| |||||||||    
T  2891340 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgatttggagtag 2891271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 10964354 - 10964447
Alignment:
Q  16 atggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccaca 109  Q
    ||||| |||| |||||||| ||||||||||||||||| | ||||||||||| ||  || ||||||| ||||||  | ||||||| |||||||||    
T  10964354 atggtagaagaaagacttacaagaattgtttggtactacatatatcaataaaataaatattctttttggtagcttaatccataaaaactccaca 10964447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 10 - 124
Target Start/End: Complemental strand, 30729941 - 30729827
Alignment:
Q  10 gacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccaca 109  Q
    |||| ||||||||||||| |||| |||| |||||||||||||| | ||||| || | |||  |||||||||| |||||   |||| |||||||||  | |    
T  30729941 gacagcatggttgaaggaggactcataaaaattgtttggtactacgtatataaacatgattgatcttcttttgggtagtcaattctataagaactttata 30729842  T
Q  110 gttaagcgtgcttga 124  Q
    ||||||||| |||||    
T  30729841 gttaagcgttcttga 30729827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 33470887 - 33470998
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||| ||||||||||||| || |||  |||||| | ||||||  || ||||||||| |||||||  ||||  |||| |||||||| ||||||||||     
T  33470887 catggttaaaggaagacttattag-attacttggtattacctatactaacaagatgcatattcttttttgtagttcattacataagaattccacagttat 33470985  T
Q  115 gcgtgcttgactt 127  Q
    ||||| |||||||    
T  33470986 gcgtgtttgactt 33470998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 134
Target Start/End: Original strand, 3652658 - 3652691
Alignment:
Q  101 aactccacagttaagcgtgcttgacttggagtag 134  Q
    |||||||||||||||| |||||||||||||||||    
T  3652658 aactccacagttaagcttgcttgacttggagtag 3652691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 9440525 - 9440488
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtact 52  Q
    |||||||||| |||| ||||||||||||||||||||||    
T  9440525 catggttgaatgaaggcttataagaattgtttggtact 9440488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 18 - 131
Target Start/End: Original strand, 105772 - 105885
Alignment:
Q  18 ggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagcg 117  Q
    |||||||||||| |||||||||||||||||||||| |||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  105772 ggttgaaggaaggcttataagaattgtttggtactacctatatcaacaaaatgcatcttcttttcggtagctcattccataagaactccacagttaagcg 105871  T
Q  118 tgcttgacttggag 131  Q
    ||||||||||||||    
T  105872 tgcttgacttggag 105885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 93; Significance: 5e-45; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 19015 - 19131
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||| |||| ||||||||||||||||||||    
T  19015 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagattcatcttcttttcggtagctcatttcataagaactccacagttaa 19114  T
Q  115 gcgtgcttgacttggag 131  Q
    |||||||||||||||||    
T  19115 gcgtgcttgacttggag 19131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 93; Significance: 5e-45; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 107560 - 107444
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||||||||||| ||||||||||||||||| |||| || ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  107560 catggttgaaggaaggcttataagaattgtttgatactaccaatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 107461  T
Q  115 gcgtgcttgacttggag 131  Q
    |||||||||||||||||    
T  107460 gcgtgcttgacttggag 107444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 92; Significance: 2e-44; HSPs: 3)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 8 - 131
Target Start/End: Complemental strand, 2314 - 2191
Alignment:
Q  8 gggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactcca 107  Q
    ||||| |||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||  ||||||||||||||| |    
T  2314 gggactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagcttattccataagaactcaa 2215  T
Q  108 cagttaagcgtgcttgacttggag 131  Q
     |||||||||||||||||||||||    
T  2214 tagttaagcgtgcttgacttggag 2191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 179 - 223
Target Start/End: Complemental strand, 2103 - 2059
Alignment:
Q  179 gtggagtcagtcgacaatcctaaaagtcgtctgagatgttacatc 223  Q
    |||| |||||||||||||||||||||| ||||| |||||||||||    
T  2103 gtggggtcagtcgacaatcctaaaagttgtctgggatgttacatc 2059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 221
Target Start/End: Complemental strand, 2554 - 2517
Alignment:
Q  184 gtcagtcgacaatcctaaaagtcgtctgagatgttaca 221  Q
    |||||||||||||||||||||| ||||| |||||||||    
T  2554 gtcagtcgacaatcctaaaagttgtctgggatgttaca 2517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 8 - 131
Target Start/End: Original strand, 154799 - 154922
Alignment:
Q  8 gggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactcca 107  Q
    ||||| |||||||||||||||| ||||||||||||||| |||||| ||| |||||| |||||||||||||||||| ||||| ||||||||||||||||||    
T  154799 gggactacatggttgaaggaaggcttataagaattgttgggtactacctgtatcaacaagatgcatcttcttttcagtagctcattccataagaactcca 154898  T
Q  108 cagttaagcgtgcttgacttggag 131  Q
    ||||||||||||||||||||||||    
T  154899 cagttaagcgtgcttgacttggag 154922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 89; Significance: 1e-42; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 10349 - 10465
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    ||||||| ||||||| |||||||||||||||| ||||| |||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  10349 catggttcaaggaaggcttataagaattgtttagtactacctatatcaacaagatgcatctttttttcggtagctcattccataagaactccacagttaa 10448  T
Q  115 gcgtgcttgacttggag 131  Q
    |||||||||||||||||    
T  10449 gcgtgcttgacttggag 10465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0557 (Bit Score: 85; Significance: 3e-40; HSPs: 1)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 14 - 134
Target Start/End: Original strand, 2153 - 2273
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagtta 113  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||| || ||||||||||||||||| |||||| |||||| |||||||||||||||||    
T  2153 acatggttgaaggaaggcttataagaattgtttggtactccctatataaacaagatgcatcttctttttggtagcccattccttaagaactccacagtta 2252  T
Q  114 agcgtgcttgacttggagtag 134  Q
    ||| |||||||| ||||||||    
T  2253 agcatgcttgacatggagtag 2273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 85; Significance: 3e-40; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 18232 - 18113
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagtta 113  Q
    |||| ||||||||||||||||||||||||||||| |||| |||||||||| |||||||||||| |||| ||||||  |||||||||||||||||||||||    
T  18232 acatagttgaaggaagacttataagaattgtttgatactacctatatcaacaagatgcatctt-tttttggtagctaattccataagaactccacagtta 18134  T
Q  114 agcgtgcttgacttggagtag 134  Q
    |||||||||||||||||||||    
T  18133 agcgtgcttgacttggagtag 18113  T

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Target: scaffold0047; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 8 - 133
Target Start/End: Complemental strand, 17702 - 17577
Alignment:
Q  8 gggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactcca 107  Q
    ||||| |||||||||||||||  |||||||||||||||||||||| |||||||||| | |||| |||||||||| |||||| || | |||||||||||||    
T  17702 gggactacatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaggatgtatcttctttttggtagctcaattcataagaactcca 17603  T
Q  108 cagttaagcgtgcttgacttggagta 133  Q
    ||||||||||||||||||||||||||    
T  17602 cagttaagcgtgcttgacttggagta 17577  T

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Target: scaffold0333 (Bit Score: 77; Significance: 2e-35; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 4610 - 4726
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    |||||||||||||||  ||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||  |||||||||||||||||||    
T  4610 catggttgaaggaaggtttagaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattttataagaactccacagttaa 4709  T
Q  115 gcgtgcttgacttggag 131  Q
    | |||||| ||||||||    
T  4710 gtgtgcttaacttggag 4726  T

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Target: scaffold0333; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 36 - 131
Target Start/End: Original strand, 5091 - 5186
Alignment:
Q  36 aagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgtgcttgacttggag 131  Q
    ||||||||||||||||| ||||||| || |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||    
T  5091 aagaattgtttggtactacctatattaacaagatgcatcttcttttcggtagctcatttcataagaactccacagttaagcgtgcttaacttggag 5186  T

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Target: scaffold0005 (Bit Score: 71; Significance: 6e-32; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 245564 - 245674
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaa 114  Q
    |||||||||||| |  |||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||  |  |||||||||||||||||||||    
T  245564 catggttgaagggatgcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcagtagcctaaaccataagaactccacagttaa 245663  T
Q  115 gcgtgcttgac 125  Q
    |||||||||||    
T  245664 gcgtgcttgac 245674  T

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Target: scaffold0005; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 8 - 127
Target Start/End: Original strand, 245128 - 245243
Alignment:
Q  8 gggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactcca 107  Q
    ||||| ||||||||||||| || |||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||  |  ||||||||||||||    
T  245128 gggactacatggttgaagggaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc-tttcggtagcctaaaccataagaactcca 245226  T
Q  108 cagttaagcgtgcttgactt 127  Q
    ||   |||||||||||||||    
T  245227 ca---aagcgtgcttgactt 245243  T

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Target: scaffold0005; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 94 - 131
Target Start/End: Original strand, 245676 - 245713
Alignment:
Q  94 ccataagaactccacagttaagcgtgcttgacttggag 131  Q
    ||||||||||||||||||||||||||||||||||||||    
T  245676 ccataagaactccacagttaagcgtgcttgacttggag 245713  T

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Target: scaffold0389 (Bit Score: 66; Significance: 6e-29; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 54 - 127
Target Start/End: Complemental strand, 13591 - 13518
Alignment:
Q  54 cctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgtgcttgactt 127  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  13591 cctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgactt 13518  T

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Target: scaffold0391 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 181
Target Start/End: Original strand, 14794 - 14952
Alignment:
Q  19 gttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgt 118  Q
    ||||||||||  |||||||||||||||||||| | ||||||||||||||||||||| |||||||||||   ||||  ||||||||| ||||||||||| |    
T  14794 gttgaaggaatgcttataagaattgtttggtaatacctatatcaataagatgcatcgtcttttcggtaattcattgaataagaacttcacagttaagcat 14893  T
Q  119 gcttgacttggagtagctagtctttggatggatggccttctgagaagtttcccaaaaaacgtg 181  Q
    | |||||||||||| |    ||||||||||| || || | || ||||||| || |||||||||    
T  14894 gtttgacttggagtgg----tctttggatgggtgaccatatgggaagttttccgaaaaacgtg 14952  T

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Target: scaffold0277 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 62 - 131
Target Start/End: Complemental strand, 14752 - 14683
Alignment:
Q  62 aataagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgtgcttgacttggag 131  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  14752 aataagatgcatcttgttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggag 14683  T

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Target: scaffold0088 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 23722 - 23785
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttct 78  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||    
T  23722 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttct 23785  T

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Target: scaffold0664 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 4075 - 4001
Alignment:
Q  19 gttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacatt 93  Q
    ||||||||||  |||||||||||||||||||||| ||| |||||| ||||||||||||||||| |||||| ||||    
T  4075 gttgaaggaatgcttataagaattgtttggtactacctgtatcaacaagatgcatcttctttttggtagcccatt 4001  T

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Target: scaffold0007 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 142371 - 142305
Alignment:
Q  15 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctttt 81  Q
    ||||||||||||||   ||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  142371 catggttgaaggaatgtttataagaattgtttggtactacctatatcaacaagatgcatcttctttt 142305  T

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Target: scaffold0036 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 39 - 133
Target Start/End: Original strand, 26143 - 26235
Alignment:
Q  39 aattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgtgcttgacttggagta 133  Q
    |||| ||||||||| | |||||||| | ||||||||||||||| |||||| ||||  ||||||||||  |||||||| |||||||||||||||||    
T  26143 aattttttggtactacatatatcaacatgatgcatcttctttttggtagctcattttataagaactc--cagttaagtgtgcttgacttggagta 26235  T

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Target: scaffold0101 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 77
Target Start/End: Original strand, 45434 - 45497
Alignment:
Q  14 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttc 77  Q
    |||| ||||||||||||||||| |||||| ||||||||| |||||||||| |||||| ||||||    
T  45434 acattgttgaaggaagacttatgagaattatttggtactacctatatcaacaagatgtatcttc 45497  T

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Target: scaffold0217 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 131
Target Start/End: Original strand, 421 - 475
Alignment:
Q  77 cttttcggtagcacattccataagaactccacagttaagcgtgcttgacttggag 131  Q
    |||||||||||| |||||||||| | ||||| ||||||||||||||||| |||||    
T  421 cttttcggtagctcattccataaaatctccatagttaagcgtgcttgacatggag 475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 94 - 131
Target Start/End: Original strand, 7070 - 7107
Alignment:
Q  94 ccataagaactccacagttaagcgtgcttgacttggag 131  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  7070 ccataagaactccacagttaagcatgcttgacttggag 7107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 130
Target Start/End: Complemental strand, 44807 - 44703
Alignment:
Q  26 gaagacttataagaattgtttggtactgcctatatcaataagatgcatcttcttttcggtagcacattccataagaactccacagttaagcgtgcttgac 125  Q
    |||| |||||||||||||||||||| | ||  || ||| |||||||  ||||||||| |||||     |||| ||||||||| ||||||  |||||||||    
T  44807 gaaggcttataagaattgtttggtattaccggtaccaacaagatgccacttcttttcagtagccaggaccattagaactccaaagttaaatgtgcttgac 44708  T
Q  126 ttgga 130  Q
    |||||    
T  44707 ttgga 44703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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