View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2104-Insertion-6 (Length: 236)
Name: NF2104-Insertion-6
Description: NF2104
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2104-Insertion-6 |
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Alignment Details
Target: chr3 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 8 - 228
Target Start/End: Original strand, 53578333 - 53578553
Alignment:
| Q |
8 |
agtccatctaccagaacatacaaaatatcaaacttcaaccctttaactagttcaataaccttatcaatctttttattctacacgtgtgatcatggagaaa |
107 |
Q |
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| T |
53578333 |
agtccatctaccagaacatacaaaatatcaaacttcaaccctttaactagttcaataaccttatcaatctttttattctacacgtgtgatcatggagaaa |
53578432 |
T |
|
| Q |
108 |
aaccttaagctgaggaacaagatcttgaagatattaccaaaaactatcattataaactttcaaaaccatccattcagtccaggtagggatcacaaatcaa |
207 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53578433 |
aaccttaagctgaggaacaagatcttgaagatattaccaaaaactatcactataaactttcaaaaccatccattcagtccaggtagggatcacaaatcaa |
53578532 |
T |
|
| Q |
208 |
gacaagataacgcaacaaagt |
228 |
Q |
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||||||||||||||||||||| |
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| T |
53578533 |
gacaagataacgcaacaaagt |
53578553 |
T |
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